ubiquitin-protein transferase activity
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD12G1012300.v1.1 MD12G1012400.v1.1 MD14G1010100.v1.1 MD14G1010200.v1.1 |
| prunus_persica | Prupe.7G016200_v2.0.a1 Prupe.7G016300_v2.0.a1 |
| pyrus_communis | pycom12g00970 pycom12g00980 pycom14g00850 pycom14g00860 |
| rosa_chinensis | RchiOBHm_Chr3g0495961 |
| rosa_laevigata | RLG00000022576 |
| rosa_roxburghii | Rroxscaffold_6G00389740 |
| rosa_rugosa | Rorug03G0278000 |
| rosa_samantha | Rh3AG325300 Rh3BG361800 Rh3CG357800 Rh3DG361100 |
| rosa_wichuraiana | Rw3G028440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 26 |
| AdeI | CACNNNGTG | 1 cut(s) | 197 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 287 |
| AjnI | CCWGG | 2 cut(s) | 146, 319 |
| AluBI | AGCT | 2 cut(s) | 11, 329 |
| AluI | AGCT | 2 cut(s) | 11, 329 |
| ApeKI | GCWGC | 1 cut(s) | 64 |
| ApoI | RAATTY | 1 cut(s) | 26 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 61, 93 |
| AsuC2I | CCSGG | 1 cut(s) | 282 |
| AsuHPI | GGTGA | 1 cut(s) | 293 |
| AxyI | CCTNAGG | 1 cut(s) | 155 |
| BbvI | GCAGC | 1 cut(s) | 51 |
| BccI | CCATC | 1 cut(s) | 250 |
| BciT130I | CCWGG | 2 cut(s) | 148, 321 |
| BcnI | CCSGG | 1 cut(s) | 282 |
| BfmI | CTRYAG | 1 cut(s) | 132 |
| BisI | GCNGC | 1 cut(s) | 65 |
| BlsI | GCNGC | 1 cut(s) | 66 |
| Bme1390I | CCNGG | 3 cut(s) | 148, 282, 321 |
| BmiI | GGNNCC | 1 cut(s) | 152 |
| BmrFI | CCNGG | 3 cut(s) | 148, 282, 321 |
| BmrI | ACTGGG | 1 cut(s) | 203 |
| BmuI | ACTGGG | 1 cut(s) | 203 |
| BpuMI | CCSGG | 1 cut(s) | 282 |
| BsaJI | CCNNGG | 1 cut(s) | 281 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 287 |
| Bse1I | ACTGG | 1 cut(s) | 198 |
| Bse21I | CCTNAGG | 1 cut(s) | 155 |
| BseBI | CCWGG | 2 cut(s) | 148, 321 |
| BseDI | CCNNGG | 1 cut(s) | 281 |
| BseGI | GGATG | 1 cut(s) | 261 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 287 |
| BseMII | CTCAG | 2 cut(s) | 47, 169 |
| BseNI | ACTGG | 1 cut(s) | 198 |
| BseRI | GAGGAG | 1 cut(s) | 35 |
| BseXI | GCAGC | 1 cut(s) | 51 |
| BsgI | GTGCAG | 1 cut(s) | 219 |
| BsiSI | CCGG | 1 cut(s) | 281 |
| BslFI | GGGAC | 1 cut(s) | 298 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 287 |
| BsmFI | GGGAC | 1 cut(s) | 298 |
| BspCNI | CTCAG | 2 cut(s) | 46, 168 |
| BspLI | GGNNCC | 1 cut(s) | 152 |
| BspMAI | CTGCAG | 1 cut(s) | 136 |
| BsrI | ACTGG | 1 cut(s) | 198 |
| BssECI | CCNNGG | 1 cut(s) | 281 |
| Bst2UI | CCWGG | 2 cut(s) | 148, 321 |
| Bst4CI | ACNGT | 1 cut(s) | 181 |
| BstDEI | CTNAG | 3 cut(s) | 33, 80, 155 |
| BstF5I | GGATG | 1 cut(s) | 261 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 103 |
| BstNI | CCWGG | 2 cut(s) | 148, 321 |
| BstSCI | CCNGG | 3 cut(s) | 146, 280, 319 |
| BstSFI | CTRYAG | 1 cut(s) | 132 |
| BstV1I | GCAGC | 1 cut(s) | 51 |
| Bsu36I | CCTNAGG | 1 cut(s) | 155 |
| BtsCI | GGATG | 1 cut(s) | 261 |
| BtsI | GCAGTG | 1 cut(s) | 129 |
| BtsIMutI | CAGTG | 2 cut(s) | 129, 191 |
| CviAII | CATG | 1 cut(s) | 305 |
| CviJI | RGCY | 3 cut(s) | 11, 153, 329 |
| CviKI_1 | RGCY | 3 cut(s) | 11, 153, 329 |
| DdeI | CTNAG | 3 cut(s) | 33, 80, 155 |
| DraIII | CACNNNGTG | 1 cut(s) | 197 |
| Eco81I | CCTNAGG | 1 cut(s) | 155 |
| EcoRI | GAATTC | 1 cut(s) | 26 |
| EcoRII | CCWGG | 2 cut(s) | 146, 319 |
| FaeI | CATG | 1 cut(s) | 308 |
| FaiI | YATR | 3 cut(s) | 62, 263, 306 |
| FaqI | GGGAC | 1 cut(s) | 298 |
| FatI | CATG | 1 cut(s) | 304 |
| Fnu4HI | GCNGC | 1 cut(s) | 65 |
| FokI | GGATG | 1 cut(s) | 268 |
| Fsp4HI | GCNGC | 1 cut(s) | 65 |
| GluI | GCNGC | 1 cut(s) | 65 |
| HapII | CCGG | 1 cut(s) | 281 |
| Hin1II | CATG | 1 cut(s) | 308 |
| HindIII | AAGCTT | 1 cut(s) | 9 |
| HinfI | GANTC | 1 cut(s) | 188 |
| HpaII | CCGG | 1 cut(s) | 281 |
| HphI | GGTGA | 1 cut(s) | 293 |
| Hpy188I | TCNGA | 2 cut(s) | 36, 163 |
| HpyAV | CCTTC | 4 cut(s) | 49, 124, 128, 230 |
| HpyCH4III | ACNGT | 1 cut(s) | 181 |
| HpyCH4V | TGCA | 4 cut(s) | 21, 67, 134, 200 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 103 |
| HpyF3I | CTNAG | 3 cut(s) | 33, 80, 155 |
| Hsp92II | CATG | 1 cut(s) | 308 |
| LmnI | GCTCC | 2 cut(s) | 150, 290 |
| LpnPI | CCDG | 8 cut(s) | 133, 142, 160, 179, 186, 273, 294, 306 |
| Lsp1109I | GCAGC | 1 cut(s) | 51 |
| MluCI | AATT | 1 cut(s) | 26 |
| MnlI | CCTC | 8 cut(s) | 25, 42, 53, 56, 164, 223, 241, 246 |
| MslI | CAYNNNNRTG | 1 cut(s) | 59 |
| MspI | CCGG | 1 cut(s) | 281 |
| MspR9I | CCNGG | 3 cut(s) | 148, 282, 321 |
| MvaI | CCWGG | 2 cut(s) | 148, 321 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 103 |
| NciI | CCSGG | 1 cut(s) | 282 |
| NlaIII | CATG | 1 cut(s) | 308 |
| NlaIV | GGNNCC | 1 cut(s) | 152 |
| PfeI | GAWTC | 1 cut(s) | 188 |
| PfoI | TCCNGGA | 1 cut(s) | 319 |
| PkrI | GCNGC | 1 cut(s) | 66 |
| Psp6I | CCWGG | 2 cut(s) | 146, 319 |
| PspGI | CCWGG | 2 cut(s) | 146, 319 |
| PspN4I | GGNNCC | 1 cut(s) | 152 |
| PstI | CTGCAG | 1 cut(s) | 136 |
| RseI | CAYNNNNRTG | 1 cut(s) | 59 |
| SatI | GCNGC | 1 cut(s) | 65 |
| ScrFI | CCNGG | 3 cut(s) | 148, 282, 321 |
| SetI | ASST | 5 cut(s) | 13, 41, 161, 241, 331 |
| SfcI | CTRYAG | 1 cut(s) | 132 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 59 |
| Sse9I | AATT | 1 cut(s) | 26 |
| StyD4I | CCNGG | 3 cut(s) | 146, 280, 319 |
| TaaI | ACNGT | 1 cut(s) | 181 |
| TasI | AATT | 1 cut(s) | 26 |
| TfiI | GAWTC | 1 cut(s) | 188 |
| TscAI | CASTG | 2 cut(s) | 136, 198 |
| TseI | GCWGC | 1 cut(s) | 64 |
| TspDTI | ATGAA | 2 cut(s) | 43, 183 |
| TspRI | CASTG | 2 cut(s) | 136, 198 |
| XapI | RAATTY | 1 cut(s) | 26 |