ubiquitin-protein transferase activity
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD12G1012300.v1.1 MD12G1012400.v1.1 MD14G1010100.v1.1 MD14G1010200.v1.1 |
| prunus_persica | Prupe.7G016200_v2.0.a1 Prupe.7G016300_v2.0.a1 |
| pyrus_communis | pycom12g00970 pycom12g00980 pycom14g00850 pycom14g00860 |
| rosa_chinensis | RchiOBHm_Chr3g0495961 |
| rosa_laevigata | RLG00000022576 |
| rosa_roxburghii | Rroxscaffold_6G00389740 |
| rosa_rugosa | Rorug03G0278000 |
| rosa_samantha | Rh3AG325300 Rh3BG361800 Rh3CG357800 Rh3DG361100 |
| rosa_wichuraiana | Rw3G028440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 275 |
| AcuI | CTGAAG | 2 cut(s) | 63, 231 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 272 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 16 |
| AhlI | ACTAGT | 1 cut(s) | 37 |
| AjnI | CCWGG | 2 cut(s) | 271, 295 |
| AluBI | AGCT | 1 cut(s) | 83 |
| AluI | AGCT | 1 cut(s) | 83 |
| AlwI | GGATC | 1 cut(s) | 275 |
| AspS9I | GGNCC | 1 cut(s) | 263 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 155 |
| AvaII | GGWCC | 1 cut(s) | 263 |
| BciT130I | CCWGG | 2 cut(s) | 273, 297 |
| BcuI | ACTAGT | 1 cut(s) | 37 |
| BfaI | CTAG | 1 cut(s) | 38 |
| BglII | AGATCT | 1 cut(s) | 127 |
| Bme1390I | CCNGG | 2 cut(s) | 273, 297 |
| Bme18I | GGWCC | 1 cut(s) | 263 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 16 |
| BmgT120I | GGNCC | 1 cut(s) | 263 |
| BmrFI | CCNGG | 2 cut(s) | 273, 297 |
| BmsI | GCATC | 1 cut(s) | 108 |
| BsaJI | CCNNGG | 2 cut(s) | 243, 271 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 217, 247 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 272 |
| BseBI | CCWGG | 2 cut(s) | 273, 297 |
| BseDI | CCNNGG | 2 cut(s) | 243, 271 |
| BseGI | GGATG | 1 cut(s) | 187 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 272 |
| BseMII | CTCAG | 1 cut(s) | 267 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 272 |
| Bsp143I | GATC | 5 cut(s) | 118, 127, 151, 160, 280 |
| Bsp19I | CCATGG | 1 cut(s) | 243 |
| BspCNI | CTCAG | 1 cut(s) | 266 |
| BspPI | GGATC | 1 cut(s) | 275 |
| BssECI | CCNNGG | 2 cut(s) | 243, 271 |
| BssMI | GATC | 5 cut(s) | 118, 127, 151, 160, 280 |
| BssT1I | CCWWGG | 1 cut(s) | 243 |
| Bst2UI | CCWGG | 2 cut(s) | 273, 297 |
| Bst6I | CTCTTC | 1 cut(s) | 295 |
| BstDEI | CTNAG | 1 cut(s) | 253 |
| BstDSI | CCRYGG | 1 cut(s) | 243 |
| BstF5I | GGATG | 1 cut(s) | 187 |
| BstKTI | GATC | 5 cut(s) | 121, 130, 154, 163, 283 |
| BstMBI | GATC | 5 cut(s) | 118, 127, 151, 160, 280 |
| BstNI | CCWGG | 2 cut(s) | 273, 297 |
| BstSCI | CCNGG | 2 cut(s) | 271, 295 |
| BstX2I | RGATCY | 1 cut(s) | 127 |
| BstYI | RGATCY | 1 cut(s) | 127 |
| BtgI | CCRYGG | 1 cut(s) | 243 |
| BtsCI | GGATG | 1 cut(s) | 187 |
| Cfr13I | GGNCC | 1 cut(s) | 263 |
| CseI | GACGC | 1 cut(s) | 179 |
| CviAII | CATG | 3 cut(s) | 194, 244, 278 |
| CviJI | RGCY | 1 cut(s) | 83 |
| CviKI_1 | RGCY | 1 cut(s) | 83 |
| DdeI | CTNAG | 1 cut(s) | 253 |
| DpnI | GATC | 5 cut(s) | 120, 129, 153, 162, 282 |
| DpnII | GATC | 5 cut(s) | 118, 127, 151, 160, 280 |
| DriI | GACNNNNNGTC | 1 cut(s) | 16 |
| Eam1104I | CTCTTC | 1 cut(s) | 295 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 16 |
| EarI | CTCTTC | 1 cut(s) | 295 |
| Eco130I | CCWWGG | 1 cut(s) | 243 |
| Eco47I | GGWCC | 1 cut(s) | 263 |
| Eco57I | CTGAAG | 2 cut(s) | 63, 231 |
| EcoRII | CCWGG | 2 cut(s) | 271, 295 |
| EcoT14I | CCWWGG | 1 cut(s) | 243 |
| ErhI | CCWWGG | 1 cut(s) | 243 |
| FaeI | CATG | 3 cut(s) | 197, 247, 281 |
| FaiI | YATR | 7 cut(s) | 29, 61, 63, 107, 195, 245, 279 |
| FatI | CATG | 3 cut(s) | 193, 243, 277 |
| FauNDI | CATATG | 1 cut(s) | 61 |
| FokI | GGATG | 1 cut(s) | 194 |
| FspBI | CTAG | 1 cut(s) | 38 |
| HgaI | GACGC | 1 cut(s) | 179 |
| Hin1II | CATG | 3 cut(s) | 197, 247, 281 |
| HphI | GGTGA | 2 cut(s) | 16, 155 |
| Hpy188I | TCNGA | 1 cut(s) | 256 |
| HpyF3I | CTNAG | 1 cut(s) | 253 |
| Hsp92II | CATG | 3 cut(s) | 197, 247, 281 |
| Kzo9I | GATC | 5 cut(s) | 118, 127, 151, 160, 280 |
| LmnI | GCTCC | 1 cut(s) | 88 |
| LpnPI | CCDG | 6 cut(s) | 26, 179, 208, 258, 282, 285 |
| LweI | GCATC | 1 cut(s) | 108 |
| MaeI | CTAG | 1 cut(s) | 38 |
| MalI | GATC | 5 cut(s) | 120, 129, 153, 162, 282 |
| MboI | GATC | 5 cut(s) | 118, 127, 151, 160, 280 |
| MboII | GAAGA | 1 cut(s) | 35 |
| MflI | RGATCY | 1 cut(s) | 127 |
| MluCI | AATT | 1 cut(s) | 169 |
| MmeI | TCCRAC | 2 cut(s) | 110, 308 |
| MnlI | CCTC | 2 cut(s) | 77, 219 |
| MseI | TTAA | 1 cut(s) | 176 |
| MspR9I | CCNGG | 2 cut(s) | 273, 297 |
| MvaI | CCWGG | 2 cut(s) | 273, 297 |
| NcoI | CCATGG | 1 cut(s) | 243 |
| NdeI | CATATG | 1 cut(s) | 61 |
| NdeII | GATC | 5 cut(s) | 118, 127, 151, 160, 280 |
| NlaIII | CATG | 3 cut(s) | 197, 247, 281 |
| Psp6I | CCWGG | 2 cut(s) | 271, 295 |
| PspGI | CCWGG | 2 cut(s) | 271, 295 |
| PspPI | GGNCC | 1 cut(s) | 263 |
| PsuI | RGATCY | 1 cut(s) | 127 |
| SaqAI | TTAA | 1 cut(s) | 176 |
| Sau3AI | GATC | 5 cut(s) | 118, 127, 151, 160, 280 |
| Sau96I | GGNCC | 1 cut(s) | 263 |
| ScrFI | CCNGG | 2 cut(s) | 273, 297 |
| SetI | ASST | 1 cut(s) | 85 |
| SfaNI | GCATC | 1 cut(s) | 108 |
| SinI | GGWCC | 1 cut(s) | 263 |
| SpeI | ACTAGT | 1 cut(s) | 37 |
| Sse9I | AATT | 1 cut(s) | 169 |
| SspMI | CTAG | 1 cut(s) | 38 |
| StyD4I | CCNGG | 2 cut(s) | 271, 295 |
| StyI | CCWWGG | 1 cut(s) | 243 |
| TasI | AATT | 1 cut(s) | 169 |
| Tru1I | TTAA | 1 cut(s) | 176 |
| Tru9I | TTAA | 1 cut(s) | 176 |
| TspDTI | ATGAA | 1 cut(s) | 198 |
| VpaK11BI | GGWCC | 1 cut(s) | 263 |
| XspI | CTAG | 1 cut(s) | 38 |