Prupe.7G068800_v2.0.a1

Chaperone protein DNAj

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0010291
Physical Location & Seq
Reverse (-)
10681846 .. 10684943
3098 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G068800.1

Sequence Viewer

Length: 876 bp
ATGGGGAAAAGAAAGAGAGCTAGGGTTTCTGAGCAAAAGCAAGCACGACAAGTCGAAGAAGAAGAAGAACAACAACAAAGCGACGTGGATCACAACCCCACTTCCACCAACGAGAAGACCCTCTACGAGGTTCTTGGCGTCGATAGAAGCGCCTCTCAACAGGAAATAAAGAAGGCGTATTATAAGTTAGCGTTACGACTCCATCCTGATAAAAATCCGGGCGATGAGGAAGCTAAAGAGAAGTTTCAGCAATTGCAAAAAGTGATATCAATTCTTGGGGATGAGGAGAAACGAGCACTCTATGACCAGACTGGTTGCATTGACGATGATGACCTTGCTGGTGATGTTGTTCAAAATCTGCGTGAATATTTCCGAGTCATATATAAAAAGGTCACTGAAGCTGATATTGAAGAGTTTGAAGCAAACTATAGAGGATCCGATTCAGAGAAGAAAGATTTGATTGATCTGTATAGCAAGTACAAGGGTAATATGAACAGACTCTTCTGTTCAATGCTTTGTTCAGACCCTAAACTTGATTCACACCGTTTCAAGGATATTCTTGATGAGGCAATTGCTGCAGGAGAACTGAAATCAACCAAAGCCTACACGAAATGGGCAAAGAAAGTATCTGAAGCAAAACCTCCTACTAGTCCTTTAAGGAGGAAGGACAAACCAAAGAAACAGTCAGAGGATCTGTATGCAATCATATCTCAGCGCCGAAATGAGAGGAAAAACCAGTTTGATTCTATGTTCTCTTCTCTAATTTCCAAATATGGCGGGTGTAGTGCTGCTTCAGAACCCTCAGAAGAAGAATTTGAGGCAACACAGAAAAAACTTGAAAGGAAAATGTCCTCCAGAAAATCAAAGCACAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

292

Amino Acids

33.66

Weight (kDa)

8.41

Isoelectric Point (pI)

55.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 183
AciI CCGC 1 cut(s) 777
AclWI GGATC 4 cut(s) 96, 429, 442, 699
AcsI RAATTY 1 cut(s) 812
AcuI CTGAAG 3 cut(s) 417, 651, 777
AcyI GRCGYC 1 cut(s) 138
AfaI GTAC 1 cut(s) 479
AfiI CCNNNNNNNGG 2 cut(s) 127, 550
AgsI TTSAA 6 cut(s) 353, 410, 419, 510, 550, 839
AhlI ACTAGT 1 cut(s) 647
AjiI CACGTC 1 cut(s) 85
AluBI AGCT 3 cut(s) 20, 233, 401
AluI AGCT 3 cut(s) 20, 233, 401
Alw21I GWGCWC 1 cut(s) 298
AlwI GGATC 4 cut(s) 96, 429, 442, 699
ApeKI GCWGC 2 cut(s) 575, 788
ApoI RAATTY 1 cut(s) 812
ArsI GACNNNNNNTTYG 2 cut(s) 668, 700
AspLEI GCGC 2 cut(s) 152, 717
AsuC2I CCSGG 1 cut(s) 219
AsuHPI GGTGA 1 cut(s) 353
BamHI GGATCC 1 cut(s) 434
BarI GAAGNNNNNNTAC 4 cut(s) 107, 139, 775, 807
BbsI GAAGAC 1 cut(s) 122
Bbv12I GWGCWC 1 cut(s) 298
BbvI GCAGC 2 cut(s) 562, 775
BccI CCATC 1 cut(s) 210
BcnI CCSGG 1 cut(s) 219
BcuI ACTAGT 1 cut(s) 647
BfaI CTAG 2 cut(s) 21, 648
BfmI CTRYAG 2 cut(s) 427, 576
BfoI RGCGCY 2 cut(s) 153, 718
BisI GCNGC 2 cut(s) 576, 789
BlsI GCNGC 2 cut(s) 577, 790
Bme1390I CCNGG 1 cut(s) 219
BmgBI CACGTC 1 cut(s) 85
BmiI GGNNCC 1 cut(s) 436
BmrFI CCNGG 1 cut(s) 219
BpiI GAAGAC 1 cut(s) 122
BpmI CTGGAG 1 cut(s) 838
BpuMI CCSGG 1 cut(s) 219
BsaBI GATNNNNATC 1 cut(s) 213
BsaHI GRCGYC 1 cut(s) 138
Bsc4I CCNNNNNNNGG 2 cut(s) 127, 550
Bse1I ACTGG 2 cut(s) 316, 736
Bse8I GATNNNNATC 1 cut(s) 213
BseGI GGATG 2 cut(s) 202, 286
BseJI GATNNNNATC 1 cut(s) 213
BseLI CCNNNNNNNGG 2 cut(s) 127, 550
BseMII CTCAG 3 cut(s) 21, 725, 816
BseNI ACTGG 2 cut(s) 316, 736
BseRI GAGGAG 1 cut(s) 299
BseXI GCAGC 2 cut(s) 562, 775
BsiHKAI GWGCWC 1 cut(s) 298
BsiSI CCGG 1 cut(s) 218
BslI CCNNNNNNNGG 2 cut(s) 127, 550
Bsp1286I GDGCHC 1 cut(s) 298
Bsp143I GATC 4 cut(s) 88, 434, 463, 691
BspACI CCGC 1 cut(s) 777
BspCNI CTCAG 3 cut(s) 22, 724, 815
BspLI GGNNCC 1 cut(s) 436
BspMAI CTGCAG 1 cut(s) 580
BspPI GGATC 4 cut(s) 96, 429, 442, 699
BsrI ACTGG 2 cut(s) 316, 736
BssMI GATC 4 cut(s) 88, 434, 463, 691
BssNI GRCGYC 1 cut(s) 138
Bst4CI ACNGT 2 cut(s) 545, 684
Bst6I CTCTTC 3 cut(s) 405, 506, 760
BstACI GRCGYC 1 cut(s) 138
BstAPI GCANNNNNTGC 1 cut(s) 575
BstC8I GCNNGC 1 cut(s) 42
BstDEI CTNAG 3 cut(s) 30, 711, 802
BstENI CCTNNNNNAGG 1 cut(s) 125
BstF5I GGATG 2 cut(s) 202, 286
BstH2I RGCGCY 2 cut(s) 153, 718
BstHHI GCGC 2 cut(s) 152, 717
BstKTI GATC 4 cut(s) 91, 437, 466, 694
BstMBI GATC 4 cut(s) 88, 434, 463, 691
BstMWI GCNNNNNNNGC 1 cut(s) 575
BstSCI CCNGG 1 cut(s) 217
BstSFI CTRYAG 2 cut(s) 427, 576
BstV1I GCAGC 2 cut(s) 562, 775
BstV2I GAAGAC 1 cut(s) 122
BstX2I RGATCY 2 cut(s) 434, 691
BstYI RGATCY 2 cut(s) 434, 691
BtgZI GCGATG 1 cut(s) 237
BtrI CACGTC 1 cut(s) 85
BtsCI GGATG 2 cut(s) 202, 286
BtsIMutI CAGTG 1 cut(s) 393
Cac8I GCNNGC 1 cut(s) 42
CfoI GCGC 2 cut(s) 152, 717
CseI GACGC 1 cut(s) 127
Csp6I GTAC 1 cut(s) 478
CviJI RGCY 4 cut(s) 20, 233, 401, 602
CviKI_1 RGCY 4 cut(s) 20, 233, 401, 602
CviQI GTAC 1 cut(s) 478
DdeI CTNAG 3 cut(s) 30, 711, 802
DpnI GATC 4 cut(s) 90, 436, 465, 693
DpnII GATC 4 cut(s) 88, 434, 463, 691
Eam1104I CTCTTC 3 cut(s) 405, 506, 760
EarI CTCTTC 3 cut(s) 405, 506, 760
Eco32I GATATC 1 cut(s) 267
Eco57I CTGAAG 3 cut(s) 417, 651, 777
EcoNI CCTNNNNNAGG 1 cut(s) 125
EcoRV GATATC 1 cut(s) 267
FauI CCCGC 1 cut(s) 770
Fnu4HI GCNGC 2 cut(s) 576, 789
FokI GGATG 2 cut(s) 189, 293
Fsp4HI GCNGC 2 cut(s) 576, 789
FspBI CTAG 2 cut(s) 21, 648
GlaI GCGC 2 cut(s) 151, 716
GluI GCNGC 2 cut(s) 576, 789
GsuI CTGGAG 1 cut(s) 838
HaeII RGCGCY 2 cut(s) 153, 718
HapII CCGG 1 cut(s) 218
HgaI GACGC 1 cut(s) 127
HhaI GCGC 2 cut(s) 152, 717
Hin1I GRCGYC 1 cut(s) 138
Hin6I GCGC 2 cut(s) 150, 715
HinP1I GCGC 2 cut(s) 150, 715
HinfI GANTC 6 cut(s) 198, 375, 440, 498, 536, 743
HpaII CCGG 1 cut(s) 218
HphI GGTGA 1 cut(s) 353
Hpy188I TCNGA 9 cut(s) 31, 374, 439, 445, 523, 631, 688, 796, 805
Hpy188III TCNNGA 3 cut(s) 206, 560, 855
Hpy99I CGWCG 2 cut(s) 86, 143
HpyAV CCTTC 2 cut(s) 166, 658
HpyCH4III ACNGT 2 cut(s) 545, 684
HpyCH4IV ACGT 1 cut(s) 84
HpyCH4V TGCA 4 cut(s) 256, 318, 578, 701
HpyF10VI GCNNNNNNNGC 1 cut(s) 575
HpyF3I CTNAG 3 cut(s) 30, 711, 802
HpySE526I ACGT 1 cut(s) 84
Hsp92I GRCGYC 1 cut(s) 138
HspAI GCGC 2 cut(s) 150, 715
Kzo9I GATC 4 cut(s) 88, 434, 463, 691
LpnPI CCDG 9 cut(s) 146, 219, 231, 297, 320, 324, 564, 749, 868
Lsp1109I GCAGC 2 cut(s) 562, 775
MaeI CTAG 2 cut(s) 21, 648
MaeII ACGT 1 cut(s) 84
MaeIII GTNAC 2 cut(s) 192, 391
MalI GATC 4 cut(s) 90, 436, 465, 693
MboI GATC 4 cut(s) 88, 434, 463, 691
MfeI CAATTG 2 cut(s) 251, 570
MflI RGATCY 2 cut(s) 434, 691
MhlI GDGCHC 1 cut(s) 298
MluCI AATT 5 cut(s) 251, 270, 570, 762, 812
MlyI GAGTC 3 cut(s) 192, 384, 492
MseI TTAA 1 cut(s) 656
MspI CCGG 1 cut(s) 218
MspR9I CCNGG 1 cut(s) 219
MunI CAATTG 2 cut(s) 251, 570
MwoI GCNNNNNNNGC 1 cut(s) 575
NciI CCSGG 1 cut(s) 219
NdeII GATC 4 cut(s) 88, 434, 463, 691
NlaIV GGNNCC 1 cut(s) 436
NmuCI GTSAC 1 cut(s) 391
PfeI GAWTC 3 cut(s) 440, 536, 743
PkrI GCNGC 2 cut(s) 577, 790
PleI GAGTC 3 cut(s) 192, 383, 492
PpsI GAGTC 3 cut(s) 192, 383, 492
PsiI TTATAA 1 cut(s) 183
PspN4I GGNNCC 1 cut(s) 436
PstI CTGCAG 1 cut(s) 580
PsuI RGATCY 2 cut(s) 434, 691
RsaI GTAC 1 cut(s) 479
RsaNI GTAC 1 cut(s) 478
SaqAI TTAA 1 cut(s) 656
SatI GCNGC 2 cut(s) 576, 789
Sau3AI GATC 4 cut(s) 88, 434, 463, 691
SchI GAGTC 3 cut(s) 192, 384, 492
ScrFI CCNGG 1 cut(s) 219
SduI GDGCHC 1 cut(s) 298
SetI ASST 8 cut(s) 22, 87, 132, 235, 336, 393, 403, 643
SfcI CTRYAG 2 cut(s) 427, 576
SpeI ACTAGT 1 cut(s) 647
Sse9I AATT 5 cut(s) 251, 270, 570, 762, 812
SsiI CCGC 1 cut(s) 777
SspI AATATT 1 cut(s) 368
SspMI CTAG 2 cut(s) 21, 648
StyD4I CCNGG 1 cut(s) 217
TaaI ACNGT 2 cut(s) 545, 684
TaiI ACGT 1 cut(s) 87
TaqI TCGA 2 cut(s) 54, 141
TasI AATT 5 cut(s) 251, 270, 570, 762, 812
TatI WGTACW 1 cut(s) 477
TfiI GAWTC 3 cut(s) 440, 536, 743
Tru1I TTAA 1 cut(s) 656
Tru9I TTAA 1 cut(s) 656
TscAI CASTG 1 cut(s) 400
TseFI GTSAC 1 cut(s) 391
TseI GCWGC 2 cut(s) 575, 788
Tsp45I GTSAC 1 cut(s) 391
TspDTI ATGAA 1 cut(s) 506
TspRI CASTG 1 cut(s) 400
XagI CCTNNNNNAGG 1 cut(s) 125
XapI RAATTY 1 cut(s) 812
XspI CTAG 2 cut(s) 21, 648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.