Prupe.7G082800_v2.0.a1

Zinc finger protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
11808872 .. 11811298
2427 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G082800.1

Sequence Viewer

Length: 1020 bp
ATGGGTCAGCCCCAATTGTCCATCATCATTCAGACTCTCACCCCCCTCTTTTATAGGACCCACACCATCCCTCCTCACCCCCACATACATCACCCCCTCCCCTCCTCCTCCCTCTCATTTCTCCTCTCCCAATTTCTCCATTTCCTCCTCTTTTTTCACCACACCCAAAACTACACCTCTTTCTCTCTCCAAATTTTCATGGACAAGGTTGAGAAGGAGACTCAAGACTTCATGAACGTAGAGTCATTTTCTCAGCTCCCCTTCATCCGCCCGGCCCCTCCCGTCAACAAAGAGAAGGGCATCCGCCTCTTTGGCATAGAATTCGGCGCAGACACCCCCACGGAAGACTCCGAATCCCTCGACTACACCAATGCCTGCGAAGACGCCGCCGCGAAAGAGTACAACATCAACACCACCACCGCCACCAACAGCAACAACAAAAGCAACGAAAGCGGAGGCGAGAGCAGCCGGAGATTTGAATGCCACTACTGCTGCCGGAACTTCCCGACCTCCCAAGCCCTCGGGGGCCACCAAAACGCGCACAAGAGAGAGCGGCAGCACGCAAAACGCGAGCACCTCCAGTCGGCCATGGTGCATGCCGGCCACCACGGCCTATCTCACGACGCGCACCACCACGTGTACGGCTTAATGAACTACACAACTTCTAGGCTTGGGGCTTCACCTCACCATCACCATACTGCTTATCCATCTTGGAATAGTAGCCACTCTAGCTCCATTGCTGGTGCTCATCAACATACTAGGTTTTACGGAAACTCTGGTGGGACGTACGGCACGCAATCAGCCCCCATAAATGGGAGCCCTTTGGCCCTGTGGCGGATCCCTGCAGTTCAGGGTACTACTAACCCTAGTTTCAATCGTGACCGTTCGATGAATTTGTTCGCCGGCGGGGAGGAGATGAAGGCAGCAGGGGTCGGTGGGACGGGCGGTCAAGGACGGTACGTGTATGACTCGTCGATGGCGAGTGTGCAAGACCATGCAAGGAAATTGCTATTTTTGTGA

Protein Analysis

340

Amino Acids

37.71

Weight (kDa)

7.46

Isoelectric Point (pI)

50.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 553
AccII CGCG 4 cut(s) 392, 539, 570, 626
AclWI GGATC 2 cut(s) 832, 845
AcoI YGGCCR 2 cut(s) 585, 601
AcsI RAATTY 3 cut(s) 192, 320, 892
AcvI CACGTG 1 cut(s) 637
AcyI GRCGYC 1 cut(s) 384
AdeI CACNNNGTG 1 cut(s) 637
AfaI GTAC 5 cut(s) 401, 641, 788, 856, 959
AfiI CCNNNNNNNGG 4 cut(s) 583, 812, 813, 834
AflIII ACRYGT 2 cut(s) 636, 960
AgsI TTSAA 2 cut(s) 479, 874
AhdI GACNNNNNGTC 1 cut(s) 945
AluBI AGCT 2 cut(s) 256, 732
AluI AGCT 2 cut(s) 256, 732
Alw21I GWGCWC 2 cut(s) 576, 748
Alw26I GTCTC 1 cut(s) 212
AlwI GGATC 2 cut(s) 832, 845
Ama87I CYCGRG 1 cut(s) 521
AoxI GGCC 6 cut(s) 273, 526, 585, 601, 610, 825
ApeKI GCWGC 4 cut(s) 465, 492, 556, 923
ApoI RAATTY 3 cut(s) 192, 320, 892
Asp700I GAANNNNTTC 1 cut(s) 896
AspLEI GCGC 3 cut(s) 329, 541, 628
AspS9I GGNCC 4 cut(s) 57, 274, 526, 826
AsuC2I CCSGG 1 cut(s) 272
AsuHPI GGTGA 7 cut(s) 31, 68, 83, 149, 672, 677, 683
AvaI CYCGRG 1 cut(s) 521
AvaII GGWCC 1 cut(s) 57
BamHI GGATCC 1 cut(s) 837
BanII GRGCYC 1 cut(s) 821
BbrPI CACGTG 1 cut(s) 637
BbsI GAAGAC 2 cut(s) 351, 387
Bbv12I GWGCWC 2 cut(s) 576, 748
BbvI GCAGC 4 cut(s) 477, 479, 568, 935
BccI CCATC 5 cut(s) 29, 74, 696, 715, 970
BceAI ACGGC 3 cut(s) 625, 658, 805
BcgI CGANNNNNNTGC 2 cut(s) 304, 338
BcnI CCSGG 1 cut(s) 272
BcoDI GTCTC 1 cut(s) 212
BfaI CTAG 4 cut(s) 666, 729, 759, 867
BfmI CTRYAG 1 cut(s) 843
BglI GCCNNNNNGGC 2 cut(s) 312, 609
BisI GCNGC 7 cut(s) 387, 390, 466, 493, 554, 557, 924
BlsI GCNGC 7 cut(s) 388, 391, 467, 494, 555, 558, 925
Bme1390I CCNGG 1 cut(s) 272
Bme18I GGWCC 1 cut(s) 57
BmeRI GACNNNNNGTC 1 cut(s) 945
BmeT110I CYCGRG 1 cut(s) 521
BmgT120I GGNCC 4 cut(s) 57, 274, 526, 826
BmiI GGNNCC 5 cut(s) 59, 276, 527, 818, 839
BmrFI CCNGG 1 cut(s) 272
BmsI GCATC 1 cut(s) 309
BpiI GAAGAC 2 cut(s) 351, 387
BpmI CTGGAG 1 cut(s) 563
BpuEI CTTGAG 1 cut(s) 207
BpuMI CCSGG 1 cut(s) 272
BsaAI YACGTR 2 cut(s) 637, 961
BsaHI GRCGYC 1 cut(s) 384
BsaJI CCNNGG 4 cut(s) 339, 520, 588, 607
BsaXI ACNNNNNCTCC 4 cut(s) 55, 85, 716, 746
Bsc4I CCNNNNNNNGG 4 cut(s) 583, 812, 813, 834
Bse118I RCCGGY 2 cut(s) 599, 902
Bse1I ACTGG 1 cut(s) 580
Bse3DI GCAATG 1 cut(s) 735
BseDI CCNNGG 4 cut(s) 339, 520, 588, 607
BseGI GGATG 3 cut(s) 66, 264, 300
BseLI CCNNNNNNNGG 4 cut(s) 583, 812, 813, 834
BseMI GCAATG 1 cut(s) 735
BseMII CTCAG 1 cut(s) 266
BseNI ACTGG 1 cut(s) 580
BseRI GAGGAG 6 cut(s) 63, 94, 97, 113, 137, 926
BseXI GCAGC 4 cut(s) 477, 479, 568, 935
Bsh1236I CGCG 4 cut(s) 392, 539, 570, 626
BshFI GGCC 6 cut(s) 275, 528, 587, 603, 612, 827
BsiHKAI GWGCWC 2 cut(s) 576, 748
BsiHKCI CYCGRG 1 cut(s) 521
BsiSI CCGG 5 cut(s) 272, 469, 496, 600, 903
BsiWI CGTACG 1 cut(s) 786
BslFI GGGAC 2 cut(s) 796, 952
BslI CCNNNNNNNGG 4 cut(s) 583, 812, 813, 834
BsmAI GTCTC 1 cut(s) 212
BsmFI GGGAC 2 cut(s) 796, 952
BsmI GAATGC 1 cut(s) 485
BsnI GGCC 6 cut(s) 275, 528, 587, 603, 612, 827
BsoBI CYCGRG 1 cut(s) 521
Bsp1286I GDGCHC 3 cut(s) 576, 748, 821
Bsp143I GATC 1 cut(s) 837
Bsp19I CCATGG 1 cut(s) 588
BspANI GGCC 6 cut(s) 275, 528, 587, 603, 612, 827
BspCNI CTCAG 1 cut(s) 265
BspFNI CGCG 4 cut(s) 392, 539, 570, 626
BspHI TCATGA 1 cut(s) 231
BspLI GGNNCC 5 cut(s) 59, 276, 527, 818, 839
BspMAI CTGCAG 1 cut(s) 847
BspPI GGATC 2 cut(s) 832, 845
BsrBI CCGCTC 1 cut(s) 553
BsrDI GCAATG 1 cut(s) 735
BsrFI RCCGGY 2 cut(s) 599, 902
BsrI ACTGG 1 cut(s) 580
BssAI RCCGGY 2 cut(s) 599, 902
BssECI CCNNGG 4 cut(s) 339, 520, 588, 607
BssMI GATC 1 cut(s) 837
BssNI GRCGYC 1 cut(s) 384
BssT1I CCWWGG 1 cut(s) 588
Bst4CI ACNGT 2 cut(s) 884, 957
BstACI GRCGYC 1 cut(s) 384
BstBAI YACGTR 2 cut(s) 637, 961
BstC8I GCNNGC 7 cut(s) 376, 561, 572, 597, 601, 794, 904
BstDEI CTNAG 1 cut(s) 252
BstDSI CCRYGG 3 cut(s) 339, 588, 607
BstF5I GGATG 3 cut(s) 66, 264, 300
BstFNI CGCG 4 cut(s) 392, 539, 570, 626
BstHHI GCGC 3 cut(s) 329, 541, 628
BstKTI GATC 1 cut(s) 840
BstMAI GTCTC 1 cut(s) 212
BstMBI GATC 1 cut(s) 837
BstMWI GCNNNNNNNGC 6 cut(s) 312, 450, 465, 489, 609, 729
BstNSI RCATGY 1 cut(s) 599
BstSCI CCNGG 1 cut(s) 270
BstSFI CTRYAG 1 cut(s) 843
BstUI CGCG 4 cut(s) 392, 539, 570, 626
BstV1I GCAGC 4 cut(s) 477, 479, 568, 935
BstV2I GAAGAC 2 cut(s) 351, 387
BstX2I RGATCY 1 cut(s) 837
BstYI RGATCY 1 cut(s) 837
BsuRI GGCC 6 cut(s) 275, 528, 587, 603, 612, 827
BtgI CCRYGG 3 cut(s) 339, 588, 607
BtsCI GGATG 3 cut(s) 66, 264, 300
Cac8I GCNNGC 7 cut(s) 376, 561, 572, 597, 601, 794, 904
CciI TCATGA 1 cut(s) 231
CfoI GCGC 3 cut(s) 329, 541, 628
Cfr10I RCCGGY 2 cut(s) 599, 902
Cfr13I GGNCC 4 cut(s) 57, 274, 526, 826
CseI GACGC 2 cut(s) 392, 632
Csp6I GTAC 5 cut(s) 400, 640, 787, 855, 958
CviAII CATG 5 cut(s) 199, 232, 589, 596, 995
CviQI GTAC 5 cut(s) 400, 640, 787, 855, 958
DdeI CTNAG 1 cut(s) 252
DpnI GATC 1 cut(s) 839
DpnII GATC 1 cut(s) 837
DraIII CACNNNGTG 1 cut(s) 637
DriI GACNNNNNGTC 1 cut(s) 945
EaeI YGGCCR 2 cut(s) 585, 601
Eam1105I GACNNNNNGTC 1 cut(s) 945
EciI GGCGGA 3 cut(s) 257, 293, 850
Eco130I CCWWGG 1 cut(s) 588
Eco24I GRGCYC 1 cut(s) 821
Eco47I GGWCC 1 cut(s) 57
Eco72I CACGTG 1 cut(s) 637
Eco88I CYCGRG 1 cut(s) 521
EcoO109I RGGNCCY 1 cut(s) 57
EcoRI GAATTC 1 cut(s) 320
EcoT14I CCWWGG 1 cut(s) 588
EcoT38I GRGCYC 1 cut(s) 821
ErhI CCWWGG 1 cut(s) 588
FaeI CATG 5 cut(s) 202, 235, 592, 599, 998
FaqI GGGAC 2 cut(s) 796, 952
FatI CATG 5 cut(s) 198, 231, 588, 595, 994
FauI CCCGC 1 cut(s) 899
Fnu4HI GCNGC 7 cut(s) 387, 390, 466, 493, 554, 557, 924
FokI GGATG 3 cut(s) 53, 251, 287
FriOI GRGCYC 1 cut(s) 821
Fsp4HI GCNGC 7 cut(s) 387, 390, 466, 493, 554, 557, 924
FspBI CTAG 4 cut(s) 666, 729, 759, 867
GlaI GCGC 3 cut(s) 328, 540, 627
GluI GCNGC 7 cut(s) 387, 390, 466, 493, 554, 557, 924
GsuI CTGGAG 1 cut(s) 563
HaeIII GGCC 6 cut(s) 275, 528, 587, 603, 612, 827
HapII CCGG 5 cut(s) 272, 469, 496, 600, 903
HgaI GACGC 2 cut(s) 392, 632
HhaI GCGC 3 cut(s) 329, 541, 628
Hin1I GRCGYC 1 cut(s) 384
Hin1II CATG 5 cut(s) 202, 235, 592, 599, 998
Hin6I GCGC 3 cut(s) 327, 539, 626
HinP1I GCGC 3 cut(s) 327, 539, 626
HincII GTYRAC 1 cut(s) 286
HindII GTYRAC 1 cut(s) 286
HinfI GANTC 6 cut(s) 34, 220, 242, 347, 353, 968
HpaII CCGG 5 cut(s) 272, 469, 496, 600, 903
HphI GGTGA 7 cut(s) 31, 68, 83, 149, 672, 677, 683
Hpy166II GTNNAC 2 cut(s) 286, 640
Hpy188I TCNGA 2 cut(s) 33, 352
Hpy188III TCNNGA 5 cut(s) 224, 232, 505, 620, 878
Hpy8I GTNNAC 2 cut(s) 286, 640
Hpy99I CGWCG 2 cut(s) 626, 976
HpyAV CCTTC 4 cut(s) 208, 271, 289, 913
HpyCH4III ACNGT 2 cut(s) 884, 957
HpyCH4IV ACGT 4 cut(s) 237, 636, 785, 960
HpyCH4V TGCA 4 cut(s) 595, 845, 988, 998
HpyF10VI GCNNNNNNNGC 6 cut(s) 312, 450, 465, 489, 609, 729
HpyF3I CTNAG 1 cut(s) 252
HpySE526I ACGT 4 cut(s) 237, 636, 785, 960
Hsp92I GRCGYC 1 cut(s) 384
Hsp92II CATG 5 cut(s) 202, 235, 592, 599, 998
HspAI GCGC 3 cut(s) 327, 539, 626
KroI GCCGGC 2 cut(s) 599, 902
KroNI GCCGGC 2 cut(s) 601, 904
Kzo9I GATC 1 cut(s) 837
LmnI GCTCC 3 cut(s) 261, 737, 816
Lsp1109I GCAGC 4 cut(s) 477, 479, 568, 935
LweI GCATC 1 cut(s) 309
MaeI CTAG 4 cut(s) 666, 729, 759, 867
MaeII ACGT 4 cut(s) 237, 636, 785, 960
MaeIII GTNAC 1 cut(s) 878
MalI GATC 1 cut(s) 839
MbiI CCGCTC 1 cut(s) 553
MboI GATC 1 cut(s) 837
MboII GAAGA 2 cut(s) 356, 392
MfeI CAATTG 1 cut(s) 14
MflI RGATCY 1 cut(s) 837
MhlI GDGCHC 3 cut(s) 576, 748, 821
MluCI AATT 6 cut(s) 14, 131, 192, 320, 892, 1004
MlyI GAGTC 5 cut(s) 28, 214, 251, 341, 962
MreI CGCCGGCG 1 cut(s) 902
MroNI GCCGGC 2 cut(s) 599, 902
MroXI GAANNNNTTC 1 cut(s) 896
MseI TTAA 1 cut(s) 647
MspI CCGG 5 cut(s) 272, 469, 496, 600, 903
MspR9I CCNGG 1 cut(s) 272
MunI CAATTG 1 cut(s) 14
Mva1269I GAATGC 1 cut(s) 485
MvnI CGCG 4 cut(s) 392, 539, 570, 626
MwoI GCNNNNNNNGC 6 cut(s) 312, 450, 465, 489, 609, 729
NaeI GCCGGC 2 cut(s) 601, 904
NciI CCSGG 1 cut(s) 272
NcoI CCATGG 1 cut(s) 588
NdeII GATC 1 cut(s) 837
NgoMIV GCCGGC 2 cut(s) 599, 902
NlaIII CATG 5 cut(s) 202, 235, 592, 599, 998
NlaIV GGNNCC 5 cut(s) 59, 276, 527, 818, 839
NmuCI GTSAC 1 cut(s) 878
NspI RCATGY 1 cut(s) 599
PaeI GCATGC 1 cut(s) 599
PagI TCATGA 1 cut(s) 231
PcsI WCGNNNNNNNCGW 2 cut(s) 567, 977
PctI GAATGC 1 cut(s) 485
PdiI GCCGGC 2 cut(s) 601, 904
PdmI GAANNNNTTC 1 cut(s) 896
PfeI GAWTC 1 cut(s) 353
Pfl23II CGTACG 1 cut(s) 786
PkrI GCNGC 7 cut(s) 388, 391, 467, 494, 555, 558, 925
PleI GAGTC 5 cut(s) 28, 214, 250, 341, 962
PmaCI CACGTG 1 cut(s) 637
PmlI CACGTG 1 cut(s) 637
PpsI GAGTC 5 cut(s) 28, 214, 250, 341, 962
Ppu21I YACGTR 2 cut(s) 637, 961
PpuMI RGGWCCY 1 cut(s) 57
Psp5II RGGWCCY 1 cut(s) 57
PspCI CACGTG 1 cut(s) 637
PspLI CGTACG 1 cut(s) 786
PspN4I GGNNCC 5 cut(s) 59, 276, 527, 818, 839
PspPI GGNCC 4 cut(s) 57, 274, 526, 826
PspPPI RGGWCCY 1 cut(s) 57
PstI CTGCAG 1 cut(s) 847
PsuI RGATCY 1 cut(s) 837
RsaI GTAC 5 cut(s) 401, 641, 788, 856, 959
RsaNI GTAC 5 cut(s) 400, 640, 787, 855, 958
SaqAI TTAA 1 cut(s) 647
SatI GCNGC 7 cut(s) 387, 390, 466, 493, 554, 557, 924
Sau3AI GATC 1 cut(s) 837
Sau96I GGNCC 4 cut(s) 57, 274, 526, 826
SchI GAGTC 5 cut(s) 28, 214, 251, 341, 962
ScrFI CCNGG 1 cut(s) 272
SduI GDGCHC 3 cut(s) 576, 748, 821
SfaNI GCATC 1 cut(s) 309
SfcI CTRYAG 1 cut(s) 843
SfiI GGCCNNNNNGGCC 1 cut(s) 609
SgrAI CRCCGGYG 1 cut(s) 902
SinI GGWCC 1 cut(s) 57
SmlI CTYRAG 1 cut(s) 222
SmoI CTYRAG 1 cut(s) 222
SphI GCATGC 1 cut(s) 599
Sse9I AATT 6 cut(s) 14, 131, 192, 320, 892, 1004
SspMI CTAG 4 cut(s) 666, 729, 759, 867
StyD4I CCNGG 1 cut(s) 270
StyI CCWWGG 1 cut(s) 588
TaaI ACNGT 2 cut(s) 884, 957
TaiI ACGT 4 cut(s) 240, 639, 788, 963
TaqI TCGA 3 cut(s) 360, 887, 974
TasI AATT 6 cut(s) 14, 131, 192, 320, 892, 1004
TatI WGTACW 1 cut(s) 399
TauI GCSGC 3 cut(s) 389, 392, 556
TfiI GAWTC 1 cut(s) 353
Tru1I TTAA 1 cut(s) 647
Tru9I TTAA 1 cut(s) 647
TseFI GTSAC 1 cut(s) 878
TseI GCWGC 4 cut(s) 465, 492, 556, 923
Tsp45I GTSAC 1 cut(s) 878
TspDTI ATGAA 7 cut(s) 187, 220, 248, 253, 665, 905, 932
TspGWI ACGGA 2 cut(s) 356, 783
VpaK11BI GGWCC 1 cut(s) 57
XapI RAATTY 3 cut(s) 192, 320, 892
XceI RCATGY 1 cut(s) 599
XmnI GAANNNNTTC 1 cut(s) 896
XspI CTAG 4 cut(s) 666, 729, 759, 867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.