Rorug03G0171100

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0002571
Physical Location & Seq
Reverse (-)
14440430 .. 14444090
3661 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0171100.1

Sequence Viewer

Length: 1434 bp
ATGCTAAGCGCAACCTGCATTGTCCTCATCTCTCTTCTCGCTTCATTCTCTCTTTCTAAAGCCTACCTCAACCTCACTCTTCCAGGCCAACATCCCAACCCAGATGAAGTTGTTCAAGAAGTTCATAGGAGGGTAAATGCTTCTATAGTAAGAAGACAAATGCTGCAAGTAACCAAGAGAGACCAGTTCTCTTCATGCCTAACCGGAAACCCTATCGACGATTGCTGGAAATGCGACCCAGACTGGCCCAGCAATCGTCAACGCTTAGCAGACTGCGCAATCGGGTTTGGTCAGTATGCTCTTGGAGGCAAAGGTGGGGAGTACTACATTGTCACCGACTCTTCCGACGATGATGCCGTGAATCCAAAGCCGGGAACTCTGAGATACGCTGTGATTCAGCCAGAACCGCTGTGGATTGTGTTCCCGAGCAACATGCTCATCAAGCTTTCTCAGGAGCTCATCTTTAATAGCTACAAGACTCTTGATGGGAGAGGAGCTAATGTTCACATTACGGGTGGGGGTTGCATTACTTTGCAGTATATAAGCAATGTCATCATCCACAATGTGCATATCCACCATTGTGTTCCCTCAGGGAACACTAATGTGCGGTCAAGCCCAACCCACTACGGCTACCGCACGAAGTCGGACGGCGACGGCATCTCCATCTTCGGGTCCAAAGACATATGGGTCGACCACTGCAGCCTATCACGCTGCAGGGACGGTCTGATCGACGCCGTGATGGGTTCCACTGGCATCACAATCTCAAACAACTACTTCACGAATCACAACGAAGTGATGCTACTGGGCCATAGCGACGATTACGTACCCGACACCGGCATGCAGGTGACCATAGCCTTCAACCACTTCGGCGAGAATCTGGTGCAGCGCATGCCCAGGTGCAGACGCGGCTACATCCACGTGGTGAACAACGACTTCACTGCATGGGAGATGTACGCGATCGGCGGGAGCGGGAACCCCACGATAAATAGCCAGGGCAACCGGTACACGGCGCCGACCAATAGGAACGCGAAGGAGGTGACGAAGCGCGTGGACACGGTGGAGGGGAGTTGGAAGGGGTGGAATTGGAGGTCGGAGGGGGACATAATGGTGAATGGAGCCTTCTTCGTGGCGTCCGGCGCCGGAGTGGAGATCAAGTACGAGAAGGCCTATAGTGTGGAGCCCAAGTCAGCGGTGCTCATTGACCAACTCATCATGCATGCTGGTGCTCTCGGAGTTGGTGGCAGGGACAACAATCTGGGGAAGTGGAACACAGGACCCAACGAAGGTTTCGATTCAGGCCCCGATTATGAGGATGAAATGTCTGGAAGCAGCATGAACATGCCAATGCAGCCACTTTCATCCACCTCCATTCTCTTTACCTTTTTGATTTCGTTCTCGTGTTGTTTTTGTATATTATCTCCGACTTGCATTTGA

Protein Analysis

477

Amino Acids

52.53

Weight (kDa)

5.95

Isoelectric Point (pI)

35.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pectate_lyase_4 PF00544 153 - 408 3.6e-24 Pectate lyase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 832
AasI GACNNNNNNGTC 1 cut(s) 686
Acc16I TGCGCA 1 cut(s) 277
Acc36I ACCTGC 2 cut(s) 23, 832
AccB1I GGYRCC 2 cut(s) 1009, 1136
AccBSI CCGCTC 1 cut(s) 969
AccI GTMKAC 1 cut(s) 690
AccII CGCG 4 cut(s) 906, 956, 1028, 1047
AciI CCGC 7 cut(s) 407, 607, 634, 906, 963, 969, 1190
AcvI CACGTG 1 cut(s) 919
AcyI GRCGYC 4 cut(s) 732, 1010, 1130, 1137
AdeI CACNNNGTG 2 cut(s) 565, 922
AfaI GTAC 5 cut(s) 323, 825, 953, 1004, 1157
AfiI CCNNNNNNNGG 5 cut(s) 371, 669, 833, 1006, 1283
AgeI ACCGGT 1 cut(s) 999
AgsI TTSAA 2 cut(s) 116, 859
AjnI CCWGG 3 cut(s) 82, 893, 990
AjuI GAANNNNNNNTTGG 2 cut(s) 1271, 1303
AleI CACNNNNGTG 2 cut(s) 579, 602
AloI GAACNNNNNNTCC 2 cut(s) 486, 518
AluBI AGCT 4 cut(s) 445, 457, 471, 497
AluI AGCT 4 cut(s) 445, 457, 471, 497
Alw21I GWGCWC 3 cut(s) 459, 1197, 1228
Alw26I GTCTC 1 cut(s) 174
Ama87I CYCGRG 1 cut(s) 424
AoxI GGCC 5 cut(s) 85, 245, 805, 1164, 1297
ApeKI GCWGC 6 cut(s) 163, 699, 711, 883, 1329, 1348
AsiGI ACCGGT 1 cut(s) 999
Asp700I GAANNNNTTC 1 cut(s) 111
AspLEI GCGC 6 cut(s) 11, 278, 888, 1012, 1047, 1139
AspS9I GGNCC 5 cut(s) 246, 672, 805, 1274, 1298
AsuC2I CCSGG 1 cut(s) 372
AsuHPI GGTGA 5 cut(s) 325, 856, 934, 1048, 1120
AvaI CYCGRG 1 cut(s) 424
AvaII GGWCC 2 cut(s) 672, 1274
AxyI CCTNAGG 1 cut(s) 589
BanI GGYRCC 2 cut(s) 1009, 1136
BanII GRGCYC 2 cut(s) 459, 1182
BarI GAAGNNNNNNTAC 2 cut(s) 783, 815
BauI CACGAG 1 cut(s) 1396
BbrPI CACGTG 1 cut(s) 919
BbsI GAAGAC 1 cut(s) 160
Bbv12I GWGCWC 3 cut(s) 459, 1197, 1228
BbvI GCAGC 6 cut(s) 150, 698, 711, 895, 1341, 1360
BccI CCATC 3 cut(s) 479, 671, 733
BceAI ACGGC 6 cut(s) 341, 643, 664, 670, 719, 1023
BcgI CGANNNNNNTGC 6 cut(s) 335, 369, 415, 449, 920, 954
BciT130I CCWGG 3 cut(s) 84, 895, 992
BcnI CCSGG 1 cut(s) 372
BcoDI GTCTC 1 cut(s) 174
BfmI CTRYAG 4 cut(s) 144, 697, 712, 1168
BfoI RGCGCY 2 cut(s) 1013, 1140
BfuAI ACCTGC 2 cut(s) 23, 832
BisI GCNGC 7 cut(s) 164, 700, 712, 884, 907, 1330, 1349
BlpI GCTNAGC 2 cut(s) 5, 265
BlsI GCNGC 7 cut(s) 165, 701, 713, 885, 908, 1331, 1350
BmcAI AGTACT 1 cut(s) 323
Bme1390I CCNGG 4 cut(s) 84, 372, 895, 992
Bme18I GGWCC 2 cut(s) 672, 1274
BmeT110I CYCGRG 1 cut(s) 424
BmgT120I GGNCC 5 cut(s) 246, 672, 805, 1274, 1298
BmiI GGNNCC 9 cut(s) 673, 745, 974, 1011, 1117, 1138, 1179, 1276, 1300
BmrFI CCNGG 4 cut(s) 84, 372, 895, 992
BmrI ACTGGG 1 cut(s) 812
BmsI GCATC 4 cut(s) 343, 666, 762, 786
BmuI ACTGGG 1 cut(s) 812
BpiI GAAGAC 1 cut(s) 160
Bpu1102I GCTNAGC 2 cut(s) 5, 265
BpuMI CCSGG 1 cut(s) 372
BsaAI YACGTR 2 cut(s) 823, 919
BsaHI GRCGYC 4 cut(s) 732, 1010, 1130, 1137
BsaI GGTCTC 1 cut(s) 174
BsaJI CCNNGG 2 cut(s) 893, 991
BsaWI WCCGGW 2 cut(s) 203, 999
BsaXI ACNNNNNCTCC 8 cut(s) 486, 516, 644, 674, 1139, 1169, 1169, 1199
Bsc4I CCNNNNNNNGG 5 cut(s) 371, 669, 833, 1006, 1283
Bse118I RCCGGY 2 cut(s) 833, 999
Bse1I ACTGG 4 cut(s) 184, 248, 754, 807
Bse21I CCTNAGG 1 cut(s) 589
Bse3DI GCAATG 1 cut(s) 553
BseBI CCWGG 3 cut(s) 84, 895, 992
BseDI CCNNGG 2 cut(s) 893, 991
BseGI GGATG 5 cut(s) 91, 555, 912, 1318, 1358
BseLI CCNNNNNNNGG 5 cut(s) 371, 669, 833, 1006, 1283
BseMI GCAATG 1 cut(s) 553
BseMII CTCAG 3 cut(s) 371, 464, 603
BseNI ACTGG 4 cut(s) 184, 248, 754, 807
BseRI GAGGAG 1 cut(s) 507
BseXI GCAGC 6 cut(s) 150, 698, 711, 895, 1341, 1360
BseYI CCCAGC 1 cut(s) 248
BsgI GTGCAG 2 cut(s) 902, 919
Bsh1236I CGCG 4 cut(s) 906, 956, 1028, 1047
Bsh1285I CGRYCG 1 cut(s) 960
BshFI GGCC 5 cut(s) 87, 247, 807, 1166, 1299
BshNI GGYRCC 2 cut(s) 1009, 1136
BshTI ACCGGT 1 cut(s) 999
BsiEI CGRYCG 1 cut(s) 960
BsiHKAI GWGCWC 3 cut(s) 459, 1197, 1228
BsiHKCI CYCGRG 1 cut(s) 424
BsiSI CCGG 6 cut(s) 204, 371, 834, 1000, 1134, 1140
BslFI GGGAC 3 cut(s) 731, 1112, 1259
BslI CCNNNNNNNGG 5 cut(s) 371, 669, 833, 1006, 1283
BsmAI GTCTC 1 cut(s) 174
BsmFI GGGAC 3 cut(s) 731, 1112, 1259
BsnI GGCC 5 cut(s) 87, 247, 807, 1166, 1299
Bso31I GGTCTC 1 cut(s) 174
BsoBI CYCGRG 1 cut(s) 424
Bsp1286I GDGCHC 4 cut(s) 459, 1182, 1197, 1228
Bsp143I GATC 3 cut(s) 726, 957, 1149
Bsp1720I GCTNAGC 2 cut(s) 5, 265
BspACI CCGC 7 cut(s) 407, 607, 634, 906, 963, 969, 1190
BspANI GGCC 5 cut(s) 87, 247, 807, 1166, 1299
BspCNI CTCAG 3 cut(s) 372, 463, 602
BspFNI CGCG 4 cut(s) 906, 956, 1028, 1047
BspLI GGNNCC 9 cut(s) 673, 745, 974, 1011, 1117, 1138, 1179, 1276, 1300
BspMAI CTGCAG 2 cut(s) 701, 716
BspMI ACCTGC 2 cut(s) 23, 832
BspT107I GGYRCC 2 cut(s) 1009, 1136
BspTNI GGTCTC 1 cut(s) 174
BsrBI CCGCTC 1 cut(s) 969
BsrDI GCAATG 1 cut(s) 553
BsrFI RCCGGY 2 cut(s) 833, 999
BsrI ACTGG 4 cut(s) 184, 248, 754, 807
BssAI RCCGGY 2 cut(s) 833, 999
BssECI CCNNGG 2 cut(s) 893, 991
BssMI GATC 3 cut(s) 726, 957, 1149
BssNI GRCGYC 4 cut(s) 732, 1010, 1130, 1137
BssSI CACGAG 1 cut(s) 1396
Bst2BI CACGAG 1 cut(s) 1396
Bst2UI CCWGG 3 cut(s) 84, 895, 992
Bst4CI ACNGT 2 cut(s) 722, 1057
Bst6I CTCTTC 4 cut(s) 39, 84, 196, 346
BstACI GRCGYC 4 cut(s) 732, 1010, 1130, 1137
BstAPI GCANNNNNTGC 1 cut(s) 889
BstBAI YACGTR 2 cut(s) 823, 919
BstC8I GCNNGC 3 cut(s) 839, 890, 1218
BstDEI CTNAG 5 cut(s) 5, 265, 380, 450, 589
BstEII GGTNACC 1 cut(s) 844
BstF5I GGATG 5 cut(s) 91, 555, 912, 1318, 1358
BstFNI CGCG 4 cut(s) 906, 956, 1028, 1047
BstH2I RGCGCY 2 cut(s) 1013, 1140
BstHHI GCGC 6 cut(s) 11, 278, 888, 1012, 1047, 1139
BstKTI GATC 3 cut(s) 729, 960, 1152
BstMAI GTCTC 1 cut(s) 174
BstMBI GATC 3 cut(s) 726, 957, 1149
BstMCI CGRYCG 1 cut(s) 960
BstNI CCWGG 3 cut(s) 84, 895, 992
BstNSI RCATGY 5 cut(s) 436, 841, 892, 1220, 1342
BstPI GGTNACC 1 cut(s) 844
BstSCI CCNGG 4 cut(s) 82, 370, 893, 990
BstSFI CTRYAG 4 cut(s) 144, 697, 712, 1168
BstSNI TACGTA 1 cut(s) 823
BstUI CGCG 4 cut(s) 906, 956, 1028, 1047
BstV1I GCAGC 6 cut(s) 150, 698, 711, 895, 1341, 1360
BstV2I GAAGAC 1 cut(s) 160
Bsu36I CCTNAGG 1 cut(s) 589
BsuRI GGCC 5 cut(s) 87, 247, 807, 1166, 1299
BtsCI GGATG 5 cut(s) 91, 555, 912, 1318, 1358
BtsI GCAGTG 2 cut(s) 694, 936
BtsIMutI CAGTG 3 cut(s) 694, 747, 936
BveI ACCTGC 2 cut(s) 23, 832
Cac8I GCNNGC 3 cut(s) 839, 890, 1218
CfoI GCGC 6 cut(s) 11, 278, 888, 1012, 1047, 1139
Cfr10I RCCGGY 2 cut(s) 833, 999
Cfr13I GGNCC 5 cut(s) 246, 672, 805, 1274, 1298
CseI GACGC 3 cut(s) 740, 912, 1119
Csp6I GTAC 5 cut(s) 322, 824, 952, 1003, 1156
CspAI ACCGGT 1 cut(s) 999
CviAII CATG 9 cut(s) 195, 433, 838, 889, 942, 1213, 1217, 1333, 1339
CviQI GTAC 5 cut(s) 322, 824, 952, 1003, 1156
DdeI CTNAG 5 cut(s) 5, 265, 380, 450, 589
DinI GGCGCC 2 cut(s) 1011, 1138
DpnI GATC 3 cut(s) 728, 959, 1151
DpnII GATC 3 cut(s) 726, 957, 1149
DraIII CACNNNGTG 2 cut(s) 565, 922
DrdI GACNNNNNNGTC 1 cut(s) 686
DseDI GACNNNNNNGTC 1 cut(s) 686
Eam1104I CTCTTC 4 cut(s) 39, 84, 196, 346
EarI CTCTTC 4 cut(s) 39, 84, 196, 346
Ecl136II GAGCTC 1 cut(s) 457
Eco105I TACGTA 1 cut(s) 823
Eco147I AGGCCT 1 cut(s) 1166
Eco24I GRGCYC 2 cut(s) 459, 1182
Eco31I GGTCTC 1 cut(s) 174
Eco47I GGWCC 2 cut(s) 672, 1274
Eco53kI GAGCTC 1 cut(s) 457
Eco72I CACGTG 1 cut(s) 919
Eco81I CCTNAGG 1 cut(s) 589
Eco88I CYCGRG 1 cut(s) 424
Eco91I GGTNACC 1 cut(s) 844
EcoICRI GAGCTC 1 cut(s) 457
EcoO109I RGGNCCY 2 cut(s) 1274, 1298
EcoO65I GGTNACC 1 cut(s) 844
EcoRII CCWGG 3 cut(s) 82, 893, 990
EcoT22I ATGCAT 1 cut(s) 1218
EcoT38I GRGCYC 2 cut(s) 459, 1182
EgeI GGCGCC 2 cut(s) 1011, 1138
EheI GGCGCC 2 cut(s) 1011, 1138
FaeI CATG 9 cut(s) 198, 436, 841, 892, 945, 1216, 1220, 1336, 1342
FaqI GGGAC 3 cut(s) 731, 1112, 1259
FatI CATG 9 cut(s) 194, 432, 837, 888, 941, 1212, 1216, 1332, 1338
FauI CCCGC 2 cut(s) 956, 962
FauNDI CATATG 1 cut(s) 683
FblI GTMKAC 1 cut(s) 690
Fnu4HI GCNGC 7 cut(s) 164, 700, 712, 884, 907, 1330, 1349
FokI GGATG 5 cut(s) 78, 542, 899, 1325, 1345
FriOI GRGCYC 2 cut(s) 459, 1182
Fsp4HI GCNGC 7 cut(s) 164, 700, 712, 884, 907, 1330, 1349
FspI TGCGCA 1 cut(s) 277
GlaI GCGC 6 cut(s) 10, 277, 887, 1011, 1046, 1138
GluI GCNGC 7 cut(s) 164, 700, 712, 884, 907, 1330, 1349
GsaI CCCAGC 1 cut(s) 252
HaeII RGCGCY 2 cut(s) 1013, 1140
HaeIII GGCC 5 cut(s) 87, 247, 807, 1166, 1299
HapII CCGG 6 cut(s) 204, 371, 834, 1000, 1134, 1140
HgaI GACGC 3 cut(s) 740, 912, 1119
HhaI GCGC 6 cut(s) 11, 278, 888, 1012, 1047, 1139
Hin1I GRCGYC 4 cut(s) 732, 1010, 1130, 1137
Hin1II CATG 9 cut(s) 198, 436, 841, 892, 945, 1216, 1220, 1336, 1342
Hin6I GCGC 6 cut(s) 9, 276, 886, 1010, 1045, 1137
HinP1I GCGC 6 cut(s) 9, 276, 886, 1010, 1045, 1137
HincII GTYRAC 2 cut(s) 260, 691
HindII GTYRAC 2 cut(s) 260, 691
HindIII AAGCTT 1 cut(s) 443
HinfI GANTC 7 cut(s) 338, 361, 394, 478, 781, 874, 1292
HpaII CCGG 6 cut(s) 204, 371, 834, 1000, 1134, 1140
HphI GGTGA 5 cut(s) 325, 856, 934, 1048, 1120
Hpy166II GTNNAC 6 cut(s) 260, 505, 691, 925, 1005, 1051
Hpy188I TCNGA 7 cut(s) 346, 381, 646, 726, 1093, 1232, 1422
Hpy188III TCNNGA 6 cut(s) 116, 424, 452, 482, 778, 1323
Hpy8I GTNNAC 6 cut(s) 260, 505, 691, 925, 1005, 1051
Hpy99I CGWCG 5 cut(s) 221, 350, 656, 734, 818
HpyAV CCTTC 6 cut(s) 865, 1024, 1066, 1129, 1156, 1277
HpyCH4III ACNGT 2 cut(s) 722, 1057
HpyCH4IV ACGT 2 cut(s) 822, 918
HpyF3I CTNAG 5 cut(s) 5, 265, 380, 450, 589
HpySE526I ACGT 2 cut(s) 822, 918
Hsp92I GRCGYC 4 cut(s) 732, 1010, 1130, 1137
Hsp92II CATG 9 cut(s) 198, 436, 841, 892, 945, 1216, 1220, 1336, 1342
HspAI GCGC 6 cut(s) 9, 276, 886, 1010, 1045, 1137
KasI GGCGCC 2 cut(s) 1009, 1136
Kzo9I GATC 3 cut(s) 726, 957, 1149
LmnI GCTCC 5 cut(s) 454, 494, 966, 1115, 1177
Lsp1109I GCAGC 6 cut(s) 150, 698, 711, 895, 1341, 1360
LweI GCATC 4 cut(s) 343, 666, 762, 786
MaeII ACGT 2 cut(s) 822, 918
MaeIII GTNAC 4 cut(s) 169, 331, 844, 1036
MalI GATC 3 cut(s) 728, 959, 1151
MbiI CCGCTC 1 cut(s) 969
MboI GATC 3 cut(s) 726, 957, 1149
MboII GAAGA 7 cut(s) 26, 71, 165, 183, 333, 658, 1114
MhlI GDGCHC 4 cut(s) 459, 1182, 1197, 1228
MluCI AATT 1 cut(s) 1081
Mly113I GGCGCC 2 cut(s) 1010, 1137
MlyI GAGTC 2 cut(s) 332, 472
MmeI TCCRAC 4 cut(s) 369, 624, 1049, 1071
Mph1103I ATGCAT 1 cut(s) 1218
MroXI GAANNNNTTC 1 cut(s) 111
MseI TTAA 1 cut(s) 465
MslI CAYNNNNRTG 9 cut(s) 579, 602, 836, 842, 917, 1106, 1221, 1337, 1343
MspA1I CMGCKG 2 cut(s) 409, 1190
MspI CCGG 6 cut(s) 204, 371, 834, 1000, 1134, 1140
MspR9I CCNGG 4 cut(s) 84, 372, 895, 992
MvaI CCWGG 3 cut(s) 84, 895, 992
MvnI CGCG 4 cut(s) 906, 956, 1028, 1047
NarI GGCGCC 2 cut(s) 1010, 1137
NciI CCSGG 1 cut(s) 372
NdeI CATATG 1 cut(s) 683
NdeII GATC 3 cut(s) 726, 957, 1149
NlaIII CATG 9 cut(s) 198, 436, 841, 892, 945, 1216, 1220, 1336, 1342
NlaIV GGNNCC 9 cut(s) 673, 745, 974, 1011, 1117, 1138, 1179, 1276, 1300
NmuCI GTSAC 3 cut(s) 331, 844, 1036
NsbI TGCGCA 1 cut(s) 277
NsiI ATGCAT 1 cut(s) 1218
NspI RCATGY 5 cut(s) 436, 841, 892, 1220, 1342
OliI CACNNNNGTG 2 cut(s) 579, 602
PaeI GCATGC 3 cut(s) 841, 892, 1220
PaqCI CACCTGC 1 cut(s) 832
PceI AGGCCT 1 cut(s) 1166
PcsI WCGNNNNNNNCGW 3 cut(s) 354, 726, 1287
PdmI GAANNNNTTC 1 cut(s) 111
PfeI GAWTC 5 cut(s) 361, 394, 781, 874, 1292
PinAI ACCGGT 1 cut(s) 999
PkrI GCNGC 7 cut(s) 165, 701, 713, 885, 908, 1331, 1350
Ple19I CGATCG 1 cut(s) 960
PleI GAGTC 2 cut(s) 332, 472
PluTI GGCGCC 2 cut(s) 1013, 1140
PmaCI CACGTG 1 cut(s) 919
PmlI CACGTG 1 cut(s) 919
PpsI GAGTC 2 cut(s) 332, 472
Ppu21I YACGTR 2 cut(s) 823, 919
PpuMI RGGWCCY 1 cut(s) 1274
Psp124BI GAGCTC 1 cut(s) 459
Psp5II RGGWCCY 1 cut(s) 1274
Psp6I CCWGG 3 cut(s) 82, 893, 990
PspCI CACGTG 1 cut(s) 919
PspEI GGTNACC 1 cut(s) 844
PspFI CCCAGC 1 cut(s) 248
PspGI CCWGG 3 cut(s) 82, 893, 990
PspN4I GGNNCC 9 cut(s) 673, 745, 974, 1011, 1117, 1138, 1179, 1276, 1300
PspPI GGNCC 5 cut(s) 246, 672, 805, 1274, 1298
PspPPI RGGWCCY 1 cut(s) 1274
PstI CTGCAG 2 cut(s) 701, 716
PvuI CGATCG 1 cut(s) 960
RsaI GTAC 5 cut(s) 323, 825, 953, 1004, 1157
RsaNI GTAC 5 cut(s) 322, 824, 952, 1003, 1156
RseI CAYNNNNRTG 9 cut(s) 579, 602, 836, 842, 917, 1106, 1221, 1337, 1343
SacI GAGCTC 1 cut(s) 459
SalI GTCGAC 1 cut(s) 689
SaqAI TTAA 1 cut(s) 465
SatI GCNGC 7 cut(s) 164, 700, 712, 884, 907, 1330, 1349
Sau3AI GATC 3 cut(s) 726, 957, 1149
Sau96I GGNCC 5 cut(s) 246, 672, 805, 1274, 1298
ScaI AGTACT 1 cut(s) 323
SchI GAGTC 2 cut(s) 332, 472
ScrFI CCNGG 4 cut(s) 84, 372, 895, 992
SduI GDGCHC 4 cut(s) 459, 1182, 1197, 1228
SfaNI GCATC 4 cut(s) 343, 666, 762, 786
SfcI CTRYAG 4 cut(s) 144, 697, 712, 1168
SfoI GGCGCC 2 cut(s) 1011, 1138
SinI GGWCC 2 cut(s) 672, 1274
SmiMI CAYNNNNRTG 9 cut(s) 579, 602, 836, 842, 917, 1106, 1221, 1337, 1343
SnaBI TACGTA 1 cut(s) 823
SphI GCATGC 3 cut(s) 841, 892, 1220
Sse9I AATT 1 cut(s) 1081
SseBI AGGCCT 1 cut(s) 1166
SsiI CCGC 7 cut(s) 407, 607, 634, 906, 963, 969, 1190
SspDI GGCGCC 2 cut(s) 1009, 1136
SstI GAGCTC 1 cut(s) 459
StuI AGGCCT 1 cut(s) 1166
StyD4I CCNGG 4 cut(s) 82, 370, 893, 990
TaaI ACNGT 2 cut(s) 722, 1057
TaiI ACGT 2 cut(s) 825, 921
TaqI TCGA 4 cut(s) 216, 690, 729, 1290
TasI AATT 1 cut(s) 1081
TatI WGTACW 1 cut(s) 321
TauI GCSGC 1 cut(s) 909
TfiI GAWTC 5 cut(s) 361, 394, 781, 874, 1292
Tru1I TTAA 1 cut(s) 465
Tru9I TTAA 1 cut(s) 465
TscAI CASTG 3 cut(s) 701, 754, 943
TseFI GTSAC 3 cut(s) 331, 844, 1036
TseI GCWGC 6 cut(s) 163, 699, 711, 883, 1329, 1348
Tsp45I GTSAC 3 cut(s) 331, 844, 1036
TspDTI ATGAA 7 cut(s) 33, 113, 120, 183, 1329, 1347, 1349
TspRI CASTG 3 cut(s) 701, 754, 943
VpaK11BI GGWCC 2 cut(s) 672, 1274
XceI RCATGY 5 cut(s) 436, 841, 892, 1220, 1342
XcmI CCANNNNNNNNNTGG 1 cut(s) 408
XmiI GTMKAC 1 cut(s) 690
XmnI GAANNNNTTC 1 cut(s) 111
ZrmI AGTACT 1 cut(s) 323
Zsp2I ATGCAT 1 cut(s) 1218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.