Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002571

Physical Location & Seq

Genomic Coordinates Reverse (-)

4392020 .. 4396667

Gene Structure 4648 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0058400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

ATGACTGATCTAATGGCGGAAATGATGGCGGAAAACTGCGACAGCGCTGCACCGGATCACAATGCGAAGCCGTCTTCAACCTCCGAAACAGTTCAAACCCTAGAGACTGTGAAGAGCGAGAGCGAGTTGGATGGTGATGTCAGTGACAAAGTTCAAACCCTAGATACTGTGACGGACGATTTGGACAGTGATGTCACTGGTAAAGATGATGCTGCAGAACAAGTTGTGGGAGTTTCTGATTTGATTGAGGAGAGTGGTATGTCAATTGAAACTGAAGCTTCCCCATTTCAGGGGGCGACCCTTCCAATTTTGCAGAAGATCATTGATTTGAGTGCCAAAATGAAGGACTTGAAGAAAGATCATACTGTCTTGTCTGATGAAGTCAAGCAAATGACGAGTTCTATTCCAGACCCTGAAGTTCTGAAAACTCTTCAGCTGCTAAGTACTGAACATGAACGTTTGAAGAAGAAGTACCTTGCTGAGTCCTCTGAGCGGAAGCGACTATACAATGAAGTGATTGAGCTCAAAGGAAATATCAGGGTTTTCTGCAGATGTAGACCTTTGAACCAAAATGAAATTTCAAATGGATATAATTCCGTTATTGAGTTCGAATCCTCCTTAGATAATGAGCTGCAGGTCCTTTCCTCTGATTCTTCAAAAAAGCAGTTCAAGTTTGACCATGTGTTCAGACCCGAGGACGACCAAGAGACTGTTTTTGCTCAAACTAAACCTATTGTCACCTCAGTGTTGGATGGGTTTAATGTGTGCATATTTGCCTATGGACAAACTGGAACTGGTAAGACCTTTACAATGGAGGGAACTCCTGAAAACAGGGGTGTCAACTACAGGACTCTAGAGGAGTTGTTTCGGATTTCAGAAGACAGAGGTGGTTCCATGCGATATGAATTATCTGTTAGCATGCTTGAGGTTTATAATGAGAAGATAAGGGATCTCTTGGTAGATAACACCAACCAACCCACTAAAAAGTTGGAAATTAAGCAAGCTGCAGATGGAACCCTGGATGTGCCAGGACTTGTTGAACCTCATGTTAATGGGTTTGAGGAGATGTGGGAACTGCTGAAGTCTGGAAGCCGCGCCAGATCCGTTGGATCAACCAGTGCTAATGAGCTGAGCAGCCGGTCTCACTGCTTGTTGCGAGTGACTGTTAAGGGGGAGAACTTGATAAGTGGGCAAAGGACTAGGAGTCAACTGTGGCTAGTAGACTTGGCTGGTAGTGAGCGTGTGGGGAGGATTGAGGTTGAAGGGGAAAGACTGAAGGAATCTCAGTTTATAAATAAATCTCTCTCAGCCCTTGGCGATGTAATCTCATCCCTTGCTTCTAAAACATCCCATATTCCTTACAGGAATTCAAAGCTCACTCATATGCTGCAGAGCTCTCTAGGAGGAGATTGCAAAACCTTGATGTTTGTCCAGATCAGCCCAAGTTCCTCAGATTTAGGAGAAACACTGTGTTCCTTGAATTTTGCCAGCCGAGTCCGAGGAGTTGAGAGTGGCCCAATTCGCAAACAAGCAGACCTCACTGAGCTGCTCAAGTACAAGCAATTGGCAGAAAAGGCTAAACATGACGAGAAGGAAACAAAGAAACTACAGGATGGTTTATCGGCTGCGCAGTTAAGGCTAGCTGCAAGAGAACACATGTGCAGAAATCTTCAAGAAAAGGTCCGAGACCTTGAGAACCAATTGGCAGAGGAAAGGAAGACCAGACTGAAACAGGAAACTAGAGCTTTCGCTACTTCTGCATCAACATCATCCTGGAAACAAGGAGCACAGAAGGGTGTTGCAGAGAAGAAGCCACCATTGGCTCCCAACAAATCAAGGCTTCCGCTGCGAAAAATTAGCAATTTCTTGCCCCAGCCATCAGCTTTTCCACCCAAAAAGAACAGCTACTCAACTTCTGCTGTCCCACCTCCTATGGATGGCAAAGAAAATGTTTCAACAACGTCAGGAGCAGCAAGAAACACCAGCCGCCTTATTTTACCAAAACGAATGTCCATTGCTGTGAGACCTCCGCCTCAGACAACAACCACAACAGCACAGCAGGTTCGTAAGCCTAAGAGACACTCCATTGCTACTCTTCCTAACCTTCGGCCTGAGCCAAACTCTTACATGGCTACGCCCCTCAACAACAACACCTCTGCCTCTCGGTTCAACAATGGCAGACCCTCATTTGTGCCGCGAAAGAGATATTCAAGGTTGTTCTCTCCAATGGAGTTGAAGACAGCAGCAGAGACAACTCCAATTGCCATGAGGAGCAGTAGTAAGTTCATGGGCAGCCCCCCAGCACAGCAGACTAGTTCATTCAAATCAAGGCCTCCCACAGCCATTGCATTGCAGCGAAAACCAGTAATTTGGAGTCCGCTAAAGTTCATAAAGAACAGGAGGCCATCACTGGCTCTGCCCTCTAGAGTGGAGATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

812

Amino Acids

90.24

Weight (kDa)

9.06

Isoelectric Point (pI)

47.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	160 - 319	5.2e-44	Microtubule binding
Kinesin	PF00225	184 - 501	3.8e-112	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002571)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62610 AT5G62610
fragaria_vesca	FvH4_5g15930 FvH4_5g15930 FvH4_5g15930
malus_domestica	MD06G1184400.v1.1 MD14G1190300.v1.1
prunus_persica	Prupe.5G183200_v2.0.a1 Prupe.5G183200_v2.0.a1 Prupe.5G183200_v2.0.a1 Prupe.5G183200_v2.0.a1 Prupe.5G183200_v2.0.a1
pyrus_communis	pycom02g03530 pycom06g16360 pycom14g15800 pycom15g07880
rosa_chinensis	RchiOBHm_Chr3g0480001 RchiOBHm_Chr4g0403251 RchiOBHm_Chr4g0405511 RchiOBHm_Chr5g0004951 RchiOBHm_Chr7g0180121
rosa_laevigata	RLG00000005291 RLG00000033379
rosa_multiflora	Rmu_co8134850.1_g000001 Rmu_ssc0000119.1_g000035
rosa_roxburghii	Rroxscaffold_3G00273110 Rroxscaffold_5G00374410
rosa_rugosa	Rorug03G0058400 Rorug03G0171100 Rorug06G0430700
rosa_samantha	Rh1CG130200 Rh3AG295000 Rh3CG073100 Rh7AG031200 Rh7BG031100 Rh7DG031700 Rh7DG200500
rosa_wichuraiana	Rw0G012070 Rw4G009590 Rw7G002590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	933, 1292
AasI	GACNNNNNNGTC	1 cut(s)	191
Acc16I	TGCGCA	1 cut(s)	1629
Acc36I	ACCTGC	2 cut(s)	625, 2050
AccBSI	CCGCTC	1 cut(s)	493
AccI	GTMKAC	2 cut(s)	556, 1221
AccII	CGCG	2 cut(s)	1095, 2197
AciI	CCGC	9 cut(s)	17, 29, 493, 1093, 1844, 1987, 2030, 2195, 2378
AclI	AACGTT	1 cut(s)	457
AclWI	GGATC	4 cut(s)	63, 957, 1095, 1117
AcsI	RAATTY	3 cut(s)	576, 1366, 1480
AcuI	CTGAAG	5 cut(s)	294, 416, 435, 1100, 1295
AfaI	GTAC	3 cut(s)	445, 473, 1556
AfeI	AGCGCT	1 cut(s)	46
AfiI	CCNNNNNNNGG	4 cut(s)	289, 290, 492, 1937
AflIII	ACRYGT	1 cut(s)	1656
AhdI	GACNNNNNGTC	1 cut(s)	1203
AhlI	ACTAGT	1 cut(s)	2312
AjnI	CCWGG	3 cut(s)	1017, 1027, 1772
AjuI	GAANNNNNNNTTGG	2 cut(s)	1802, 1834
AleI	CACNNNNGTG	1 cut(s)	743
Alw21I	GWGCWC	3 cut(s)	525, 1397, 1789
Alw26I	GTCTC	7 cut(s)	98, 701, 1146, 1680, 2017, 2071, 2243
AlwI	GGATC	4 cut(s)	63, 957, 1095, 1117
AlwNI	CAGNNNCTG	1 cut(s)	413
Ama87I	CYCGRG	1 cut(s)	692
Aor51HI	AGCGCT	1 cut(s)	46
AoxI	GGCC	4 cut(s)	1513, 2108, 2330, 2402
ApoI	RAATTY	3 cut(s)	576, 1366, 1480
ArsI	GACNNNNNNTTYG	4 cut(s)	163, 195, 1994, 2026
Asp700I	GAANNNNTTC	1 cut(s)	90
AspLEI	GCGC	3 cut(s)	47, 1097, 1630
AspS9I	GGNCC	3 cut(s)	637, 1514, 1681
AsuHPI	GGTGA	2 cut(s)	146, 730
AsuII	TTCGAA	1 cut(s)	609
AsuNHI	GCTAGC	1 cut(s)	1639
AvaI	CYCGRG	1 cut(s)	692
AvaII	GGWCC	2 cut(s)	637, 1681
BanII	GRGCYC	2 cut(s)	525, 1397
BarI	GAAGNNNNNNTAC	4 cut(s)	455, 487, 488, 520
BbsI	GAAGAC	4 cut(s)	66, 885, 1724, 2243
Bbv12I	GWGCWC	3 cut(s)	525, 1397, 1789
BccI	CCATC	8 cut(s)	19, 125, 746, 1004, 1607, 1885, 1931, 2413
BceAI	ACGGC	1 cut(s)	55
BcgI	CGANNNNNNTGC	2 cut(s)	29, 63
BciT130I	CCWGG	3 cut(s)	1019, 1029, 1774
BcoDI	GTCTC	7 cut(s)	98, 701, 1146, 1680, 2017, 2071, 2243
BcuI	ACTAGT	1 cut(s)	2312
BfmI	CTRYAG	7 cut(s)	213, 547, 632, 844, 1005, 1388, 1607
BfoI	RGCGCY	1 cut(s)	48
BfuAI	ACCTGC	2 cut(s)	625, 2050
BlpI	GCTNAGC	1 cut(s)	1130
BmcAI	AGTACT	1 cut(s)	445
Bme1390I	CCNGG	3 cut(s)	1019, 1029, 1774
Bme18I	GGWCC	2 cut(s)	637, 1681
BmeRI	GACNNNNNGTC	1 cut(s)	1203
BmeT110I	CYCGRG	1 cut(s)	692
BmgT120I	GGNCC	3 cut(s)	637, 1514, 1681
BmiI	GGNNCC	3 cut(s)	892, 1015, 1824
BmrFI	CCNGG	3 cut(s)	1019, 1029, 1774
BmsI	GCATC	2 cut(s)	199, 1769
BmtI	GCTAGC	1 cut(s)	1643
BpiI	GAAGAC	4 cut(s)	66, 885, 1724, 2243
BplI	GAGNNNNNCTC	2 cut(s)	2105, 2137
Bpu10I	CCTNAGC	1 cut(s)	2112
Bpu1102I	GCTNAGC	1 cut(s)	1130
Bpu14I	TTCGAA	1 cut(s)	609
BpuEI	CTTGAG	3 cut(s)	944, 1535, 1712
BsaI	GGTCTC	3 cut(s)	1146, 1680, 2017
BsaJI	CCNNGG	4 cut(s)	693, 1017, 1312, 1498
BsaWI	WCCGGW	1 cut(s)	52
BsaXI	ACNNNNNCTCC	2 cut(s)	2263, 2293
Bsc4I	CCNNNNNNNGG	4 cut(s)	289, 290, 492, 1937
Bse118I	RCCGGY	1 cut(s)	1137
Bse1I	ACTGG	6 cut(s)	202, 793, 799, 1116, 2363, 2415
Bse3DI	GCAATG	4 cut(s)	2013, 2085, 2343, 2348
BseBI	CCWGG	3 cut(s)	1019, 1029, 1774
BseDI	CCNNGG	4 cut(s)	693, 1017, 1312, 1498
BseGI	GGATG	8 cut(s)	136, 757, 1027, 1328, 1346, 1618, 1769, 1942
BseLI	CCNNNNNNNGG	4 cut(s)	289, 290, 492, 1937
BseMI	GCAATG	4 cut(s)	2013, 2085, 2343, 2348
BseNI	ACTGG	6 cut(s)	202, 793, 799, 1116, 2363, 2415
BseRI	GAGGAG	6 cut(s)	263, 872, 1076, 1419, 1515, 2284
BseYI	CCCAGC	2 cut(s)	1872, 2299
BsgI	GTGCAG	2 cut(s)	33, 1681
Bsh1236I	CGCG	2 cut(s)	1095, 2197
BshFI	GGCC	4 cut(s)	1515, 2110, 2332, 2404
BsiHKAI	GWGCWC	3 cut(s)	525, 1397, 1789
BsiHKCI	CYCGRG	1 cut(s)	692
BsiSI	CCGG	2 cut(s)	53, 1138
BslFI	GGGAC	1 cut(s)	1907
BslI	CCNNNNNNNGG	4 cut(s)	289, 290, 492, 1937
BsmAI	GTCTC	7 cut(s)	98, 701, 1146, 1680, 2017, 2071, 2243
BsmFI	GGGAC	1 cut(s)	1907
BsnI	GGCC	4 cut(s)	1515, 2110, 2332, 2404
Bso31I	GGTCTC	3 cut(s)	1146, 1680, 2017
BsoBI	CYCGRG	1 cut(s)	692
Bsp119I	TTCGAA	1 cut(s)	609
Bsp1286I	GDGCHC	3 cut(s)	525, 1397, 1789
Bsp143I	GATC	8 cut(s)	7, 55, 318, 358, 949, 1100, 1109, 1434
Bsp1720I	GCTNAGC	1 cut(s)	1130
BspACI	CCGC	9 cut(s)	17, 29, 493, 1093, 1844, 1987, 2030, 2195, 2378
BspANI	GGCC	4 cut(s)	1515, 2110, 2332, 2404
BspFNI	CGCG	2 cut(s)	1095, 2197
BspLI	GGNNCC	3 cut(s)	892, 1015, 1824
BspMAI	CTGCAG	5 cut(s)	217, 551, 636, 1009, 1392
BspMI	ACCTGC	2 cut(s)	625, 2050
BspOI	GCTAGC	1 cut(s)	1643
BspPI	GGATC	4 cut(s)	63, 957, 1095, 1117
BspQI	GCTCTTC	1 cut(s)	107
BspT104I	TTCGAA	1 cut(s)	609
BspTNI	GGTCTC	3 cut(s)	1146, 1680, 2017
BsrBI	CCGCTC	1 cut(s)	493
BsrDI	GCAATG	4 cut(s)	2013, 2085, 2343, 2348
BsrFI	RCCGGY	1 cut(s)	1137
BsrI	ACTGG	6 cut(s)	202, 793, 799, 1116, 2363, 2415
BssAI	RCCGGY	1 cut(s)	1137
BssECI	CCNNGG	4 cut(s)	693, 1017, 1312, 1498
BssMI	GATC	8 cut(s)	7, 55, 318, 358, 949, 1100, 1109, 1434
BssT1I	CCWWGG	1 cut(s)	1312
Bst2UI	CCWGG	3 cut(s)	1019, 1029, 1774
Bst4CI	ACNGT	9 cut(s)	91, 109, 169, 188, 367, 712, 1165, 1212, 1470
Bst6I	CTCTTC	3 cut(s)	107, 435, 2100
BstBI	TTCGAA	1 cut(s)	609
BstC8I	GCNNGC	4 cut(s)	920, 1002, 1489, 1641
BstF5I	GGATG	8 cut(s)	136, 757, 1027, 1328, 1346, 1618, 1769, 1942
BstFNI	CGCG	2 cut(s)	1095, 2197
BstH2I	RGCGCY	1 cut(s)	48
BstHHI	GCGC	3 cut(s)	47, 1097, 1630
BstKTI	GATC	8 cut(s)	10, 58, 321, 361, 952, 1103, 1112, 1437
BstMAI	GTCTC	7 cut(s)	98, 701, 1146, 1680, 2017, 2071, 2243
BstMBI	GATC	8 cut(s)	7, 55, 318, 358, 949, 1100, 1109, 1434
BstMWI	GCNNNNNNNGC	5 cut(s)	1521, 1574, 1636, 1757, 1846
BstNI	CCWGG	3 cut(s)	1019, 1029, 1774
BstNSI	RCATGY	2 cut(s)	922, 1660
BstSCI	CCNGG	3 cut(s)	1017, 1027, 1772
BstSFI	CTRYAG	7 cut(s)	213, 547, 632, 844, 1005, 1388, 1607
BstUI	CGCG	2 cut(s)	1095, 2197
BstV2I	GAAGAC	4 cut(s)	66, 885, 1724, 2243
BstX2I	RGATCY	2 cut(s)	949, 1100
BstXI	CCANNNNNNTGG	1 cut(s)	2370
BstYI	RGATCY	2 cut(s)	949, 1100
BsuRI	GGCC	4 cut(s)	1515, 2110, 2332, 2404
BtgZI	GCGATG	1 cut(s)	1332
BtsCI	GGATG	8 cut(s)	136, 757, 1027, 1328, 1346, 1618, 1769, 1942
BtsI	GCAGTG	1 cut(s)	1144
BtsIMutI	CAGTG	9 cut(s)	148, 193, 195, 750, 1123, 1144, 1466, 1539, 2408
BveI	ACCTGC	2 cut(s)	625, 2050
Cac8I	GCNNGC	4 cut(s)	920, 1002, 1489, 1641
CaiI	CAGNNNCTG	1 cut(s)	413
CfoI	GCGC	3 cut(s)	47, 1097, 1630
Cfr10I	RCCGGY	1 cut(s)	1137
Cfr13I	GGNCC	3 cut(s)	637, 1514, 1681
Csp6I	GTAC	3 cut(s)	444, 472, 1555
CspCI	CAANNNNNGTGG	2 cut(s)	2326, 2361
CviQI	GTAC	3 cut(s)	444, 472, 1555
DpnI	GATC	8 cut(s)	9, 57, 320, 360, 951, 1102, 1111, 1436
DpnII	GATC	8 cut(s)	7, 55, 318, 358, 949, 1100, 1109, 1434
DrdI	GACNNNNNNGTC	1 cut(s)	191
DriI	GACNNNNNGTC	1 cut(s)	1203
DseDI	GACNNNNNNGTC	1 cut(s)	191
Eam1104I	CTCTTC	3 cut(s)	107, 435, 2100
Eam1105I	GACNNNNNGTC	1 cut(s)	1203
EarI	CTCTTC	3 cut(s)	107, 435, 2100
EciI	GGCGGA	3 cut(s)	32, 44, 2019
Ecl136II	GAGCTC	2 cut(s)	523, 1395
Eco130I	CCWWGG	1 cut(s)	1312
Eco147I	AGGCCT	1 cut(s)	2332
Eco24I	GRGCYC	2 cut(s)	525, 1397
Eco31I	GGTCTC	3 cut(s)	1146, 1680, 2017
Eco47I	GGWCC	2 cut(s)	637, 1681
Eco47III	AGCGCT	1 cut(s)	46
Eco53kI	GAGCTC	2 cut(s)	523, 1395
Eco57I	CTGAAG	5 cut(s)	294, 416, 435, 1100, 1295
Eco88I	CYCGRG	1 cut(s)	692
EcoICRI	GAGCTC	2 cut(s)	523, 1395
EcoO109I	RGGNCCY	1 cut(s)	637
EcoRI	GAATTC	1 cut(s)	1366
EcoRII	CCWGG	3 cut(s)	1017, 1027, 1772
EcoT14I	CCWWGG	1 cut(s)	1312
EcoT38I	GRGCYC	2 cut(s)	525, 1397
ErhI	CCWWGG	1 cut(s)	1312
FaqI	GGGAC	1 cut(s)	1907
FauNDI	CATATG	1 cut(s)	1383
FblI	GTMKAC	2 cut(s)	556, 1221
FokI	GGATG	8 cut(s)	143, 764, 1034, 1315, 1333, 1625, 1756, 1949
FriOI	GRGCYC	2 cut(s)	525, 1397
FspI	TGCGCA	1 cut(s)	1629
GlaI	GCGC	3 cut(s)	46, 1096, 1629
GsaI	CCCAGC	2 cut(s)	1876, 2303
HaeII	RGCGCY	1 cut(s)	48
HaeIII	GGCC	4 cut(s)	1515, 2110, 2332, 2404
HapII	CCGG	2 cut(s)	53, 1138
HhaI	GCGC	3 cut(s)	47, 1097, 1630
Hin6I	GCGC	3 cut(s)	45, 1095, 1628
HinP1I	GCGC	3 cut(s)	45, 1095, 1628
HincII	GTYRAC	2 cut(s)	841, 1208
HindII	GTYRAC	2 cut(s)	841, 1208
HindIII	AAGCTT	1 cut(s)	276
HinfI	GANTC	8 cut(s)	482, 611, 650, 850, 1204, 1280, 1494, 2374
HpaII	CCGG	2 cut(s)	53, 1138
HphI	GGTGA	2 cut(s)	146, 730
Hpy166II	GTNNAC	4 cut(s)	557, 841, 1208, 1222
Hpy188III	TCNNGA	8 cut(s)	407, 824, 854, 1086, 1432, 1673, 1965, 2424
Hpy8I	GTNNAC	4 cut(s)	557, 841, 1208, 1222
HpyAV	CCTTC	7 cut(s)	311, 337, 1256, 1270, 1585, 1786, 2114
HpyCH4III	ACNGT	9 cut(s)	91, 109, 169, 188, 367, 712, 1165, 1212, 1470
HpyCH4IV	ACGT	2 cut(s)	457, 1961
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1521, 1574, 1636, 1757, 1846
HpySE526I	ACGT	2 cut(s)	457, 1961
HspAI	GCGC	3 cut(s)	45, 1095, 1628
Kzo9I	GATC	8 cut(s)	7, 55, 318, 358, 949, 1100, 1109, 1434
LguI	GCTCTTC	1 cut(s)	107
LmnI	GCTCC	4 cut(s)	1784, 1828, 1967, 2271
LweI	GCATC	2 cut(s)	199, 1769
MaeII	ACGT	2 cut(s)	457, 1961
MaeIII	GTNAC	5 cut(s)	143, 169, 193, 736, 1159
MalI	GATC	8 cut(s)	9, 57, 320, 360, 951, 1102, 1111, 1436
MbiI	CCGCTC	1 cut(s)	493
MboI	GATC	8 cut(s)	7, 55, 318, 358, 949, 1100, 1109, 1434
MfeI	CAATTG	4 cut(s)	264, 1562, 1700, 2259
MflI	RGATCY	2 cut(s)	949, 1100
MhlI	GDGCHC	3 cut(s)	525, 1397, 1789
MlyI	GAGTC	5 cut(s)	491, 844, 1213, 1503, 2383
MmeI	TCCRAC	4 cut(s)	108, 729, 969, 1087
MroXI	GAANNNNTTC	1 cut(s)	90
MseI	TTAA	5 cut(s)	759, 996, 1050, 1167, 1634
MslI	CAYNNNNRTG	4 cut(s)	743, 1050, 1382, 2018
MspA1I	CMGCKG	2 cut(s)	436, 1846
MspI	CCGG	2 cut(s)	53, 1138
MspR9I	CCNGG	3 cut(s)	1019, 1029, 1774
MunI	CAATTG	4 cut(s)	264, 1562, 1700, 2259
MvaI	CCWGG	3 cut(s)	1019, 1029, 1774
MvnI	CGCG	2 cut(s)	1095, 2197
MwoI	GCNNNNNNNGC	5 cut(s)	1521, 1574, 1636, 1757, 1846
NdeI	CATATG	1 cut(s)	1383
NdeII	GATC	8 cut(s)	7, 55, 318, 358, 949, 1100, 1109, 1434
NheI	GCTAGC	1 cut(s)	1639
NlaIV	GGNNCC	3 cut(s)	892, 1015, 1824
NmeAIII	GCCGAG	1 cut(s)	1517
NmuCI	GTSAC	5 cut(s)	143, 169, 193, 736, 1159
NsbI	TGCGCA	1 cut(s)	1629
NspI	RCATGY	2 cut(s)	922, 1660
NspV	TTCGAA	1 cut(s)	609
OliI	CACNNNNGTG	1 cut(s)	743
PaeI	GCATGC	1 cut(s)	922
PceI	AGGCCT	1 cut(s)	2332
PciI	ACATGT	1 cut(s)	1656
PciSI	GCTCTTC	1 cut(s)	107
PdmI	GAANNNNTTC	1 cut(s)	90
PfeI	GAWTC	3 cut(s)	611, 650, 1280
PfoI	TCCNGGA	1 cut(s)	1772
PleI	GAGTC	5 cut(s)	490, 844, 1212, 1502, 2382
PpsI	GAGTC	5 cut(s)	490, 844, 1212, 1502, 2382
PpuMI	RGGWCCY	1 cut(s)	637
PscI	ACATGT	1 cut(s)	1656
PsiI	TTATAA	2 cut(s)	933, 1292
Psp124BI	GAGCTC	2 cut(s)	525, 1397
Psp1406I	AACGTT	1 cut(s)	457
Psp5II	RGGWCCY	1 cut(s)	637
Psp6I	CCWGG	3 cut(s)	1017, 1027, 1772
PspFI	CCCAGC	2 cut(s)	1872, 2299
PspGI	CCWGG	3 cut(s)	1017, 1027, 1772
PspN4I	GGNNCC	3 cut(s)	892, 1015, 1824
PspPI	GGNCC	3 cut(s)	637, 1514, 1681
PspPPI	RGGWCCY	1 cut(s)	637
PstI	CTGCAG	5 cut(s)	217, 551, 636, 1009, 1392
PstNI	CAGNNNCTG	1 cut(s)	413
PsuI	RGATCY	2 cut(s)	949, 1100
PvuII	CAGCTG	1 cut(s)	436
RsaI	GTAC	3 cut(s)	445, 473, 1556
RsaNI	GTAC	3 cut(s)	444, 472, 1555
RseI	CAYNNNNRTG	4 cut(s)	743, 1050, 1382, 2018
SacI	GAGCTC	2 cut(s)	525, 1397
SapI	GCTCTTC	1 cut(s)	107
SaqAI	TTAA	5 cut(s)	759, 996, 1050, 1167, 1634
Sau3AI	GATC	8 cut(s)	7, 55, 318, 358, 949, 1100, 1109, 1434
Sau96I	GGNCC	3 cut(s)	637, 1514, 1681
ScaI	AGTACT	1 cut(s)	445
SchI	GAGTC	5 cut(s)	491, 844, 1213, 1503, 2383
ScrFI	CCNGG	3 cut(s)	1019, 1029, 1774
SduI	GDGCHC	3 cut(s)	525, 1397, 1789
SfaNI	GCATC	2 cut(s)	199, 1769
SfcI	CTRYAG	7 cut(s)	213, 547, 632, 844, 1005, 1388, 1607
SfuI	TTCGAA	1 cut(s)	609
SinI	GGWCC	2 cut(s)	637, 1681
SmiMI	CAYNNNNRTG	4 cut(s)	743, 1050, 1382, 2018
SmlI	CTYRAG	3 cut(s)	923, 1550, 1691
SmoI	CTYRAG	3 cut(s)	923, 1550, 1691
SpeI	ACTAGT	1 cut(s)	2312
SphI	GCATGC	1 cut(s)	922
SseBI	AGGCCT	1 cut(s)	2332
SsiI	CCGC	9 cut(s)	17, 29, 493, 1093, 1844, 1987, 2030, 2195, 2378
SstI	GAGCTC	2 cut(s)	525, 1397
StuI	AGGCCT	1 cut(s)	2332
StyD4I	CCNGG	3 cut(s)	1017, 1027, 1772
StyI	CCWWGG	1 cut(s)	1312
TaaI	ACNGT	9 cut(s)	91, 109, 169, 188, 367, 712, 1165, 1212, 1470
TaiI	ACGT	2 cut(s)	460, 1964
TaqI	TCGA	1 cut(s)	609
TatI	WGTACW	2 cut(s)	443, 1554
TauI	GCSGC	3 cut(s)	1095, 1989, 2197
TfiI	GAWTC	3 cut(s)	611, 650, 1280
Tru1I	TTAA	5 cut(s)	759, 996, 1050, 1167, 1634
Tru9I	TTAA	5 cut(s)	759, 996, 1050, 1167, 1634
TscAI	CASTG	9 cut(s)	148, 193, 202, 750, 1123, 1151, 1473, 1546, 2415
TseFI	GTSAC	5 cut(s)	143, 169, 193, 736, 1159
Tsp45I	GTSAC	5 cut(s)	143, 169, 193, 736, 1159
TspDTI	ATGAA	9 cut(s)	356, 393, 468, 525, 588, 918, 2275, 2307, 2377
TspGWI	ACGGA	3 cut(s)	188, 586, 1093
TspRI	CASTG	9 cut(s)	148, 193, 202, 750, 1123, 1151, 1473, 1546, 2415
VpaK11BI	GGWCC	2 cut(s)	637, 1681
XapI	RAATTY	3 cut(s)	576, 1366, 1480
XbaI	TCTAGA	2 cut(s)	853, 2423
XceI	RCATGY	2 cut(s)	922, 1660
XcmI	CCANNNNNNNNNTGG	1 cut(s)	985
XmiI	GTMKAC	2 cut(s)	556, 1221
XmnI	GAANNNNTTC	1 cut(s)	90
ZrmI	AGTACT	1 cut(s)	445

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.