Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0014955

Physical Location & Seq

Genomic Coordinates Forward (+)

13221172 .. 13223823

Gene Structure 2652 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G102500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 918 bp

ATGGCTTCTTTCTCTCTCCACTATCATCCTCTCCCTTCCTCCAAAACCCAAATTCCCTGCACCTCTTCTTATGGCAGCCCTAGACGCCTCTCCCTGTCCAAATTCACCTCCTCACGTCCCCAACTTTCCTGTTCTGTTTCCAAGGAGGGTTCCTCCGGAGATAACCTCCCCAGCACTTTTTGTATCATAGAAGGGCCAGAGACGGTACAGGACTTTGTTCAGATGCAGCTGCAGGAAATTCAGGACAACATCAGGAGCAGGCGCAACAAGATTTTTCTTCTCATGGAAGAGCTAAGGAGATTGCGGGTGCAGCACCGCATAAAGATGGCGAAAGATATCGATGAGGCTTGCGAGGAAGAGTCAAATGAGATGCCGGACATTCCATCAACTATCCCTTTTCTCAATCATGTGACACCAAAGACATTGAAGCAGCTCTACCTCACAAGTTTATCAATGATATCTACTGTAATTGTATTTGGGGGCCTTATTGCACCCACGTTGGAACTAAAATTAGGTATAGGAGGTACCTCTTATGAAGACTTCATTCGCAGCATGCATTTGCCTTTGCAATTAAGTCAGGTTGATCCCATTGTGGCATCTTTCTCGGGTGGGGCAGTGGGTGTTATTTCAGCATTGATGTTGATTGAAGCTAACAATGTTGAGCAACAAGAGAAGAAAAGGTGCAAATACTGCCACGGAACTGGGTACTTGGCCTGTGCTAGATGTTCAGCAAGTGGTGTGTGCTTGAACATCAATCCTATATTAGAATCTAGTGCGTCGGACCGCCCTTTGCGAGTTCCCACAACTGAGAGGTGTCAAAATTGCTCTGGTGCTGGAAAGGTCATGTGCCCAACATGCCTCTGCACTGGGATGATGATGGCAAGCGAGCACGACCCACGGATAGATCCATTTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009889 GO:0009891 GO:0009893 GO:0009941 GO:0016020 GO:0019216 GO:0019222 GO:0019747 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031647 GO:0031967 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046889 GO:0046890 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050821 GO:0065007 GO:0065008 GO:0080090 GO:1904143

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

306

Amino Acids

33.61

Weight (kDa)

6.65

Isoelectric Point (pI)

66.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06130 AT5G06130
fragaria_vesca	FvH4_6g19330
malus_domestica	MD02G1252400.v1.1 MD12G1029100.v1.1 MD14G1029300.v1.1 MD14G1029400.v1.1
prunus_persica	Prupe.7G102500_v2.0.a1
pyrus_communis	pycom12g02780 pycom14g02740
rosa_chinensis	RchiOBHm_Chr3g0474581
rosa_laevigata	RLG00000023910
rosa_multiflora	Rmu_sc0001353.1_g000037
rosa_roxburghii	Rroxscaffold_6G00407060
rosa_rugosa	Rorug03G0141900
rosa_wichuraiana	Rw3G017550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	524
AccB1I	GGYRCC	1 cut(s)	524
AccIII	TCCGGA	1 cut(s)	155
AciI	CCGC	3 cut(s)	304, 316, 784
AclWI	GGATC	2 cut(s)	578, 899
AcsI	RAATTY	3 cut(s)	51, 101, 237
AcyI	GRCGYC	1 cut(s)	85
AfaI	GTAC	3 cut(s)	207, 526, 707
AgsI	TTSAA	3 cut(s)	427, 647, 748
AjiI	CACGTC	1 cut(s)	116
AluBI	AGCT	4 cut(s)	229, 292, 433, 650
AluI	AGCT	4 cut(s)	229, 292, 433, 650
Alw21I	GWGCWC	1 cut(s)	891
Alw26I	GTCTC	1 cut(s)	194
AlwI	GGATC	2 cut(s)	578, 899
Ama87I	CYCGRG	1 cut(s)	604
Aor13HI	TCCGGA	1 cut(s)	155
AoxI	GGCC	3 cut(s)	194, 481, 711
ApeKI	GCWGC	6 cut(s)	75, 226, 229, 310, 430, 549
ApoI	RAATTY	3 cut(s)	51, 101, 237
Asp718I	GGTACC	1 cut(s)	524
AspLEI	GCGC	1 cut(s)	264
AspS9I	GGNCC	3 cut(s)	194, 481, 781
AsuHPI	GGTGA	1 cut(s)	97
AvaI	CYCGRG	1 cut(s)	604
AvaII	GGWCC	1 cut(s)	781
BaeGI	GKGCMC	1 cut(s)	851
BanI	GGYRCC	1 cut(s)	524
BarI	GAAGNNNNNNTAC	2 cut(s)	419, 451
BbsI	GAAGAC	1 cut(s)	543
Bbv12I	GWGCWC	1 cut(s)	891
BbvI	GCAGC	6 cut(s)	87, 216, 238, 322, 442, 561
BccI	CCATC	3 cut(s)	319, 391, 871
BcgI	CGANNNNNNTGC	2 cut(s)	585, 619
BcoDI	GTCTC	1 cut(s)	194
BfaI	CTAG	3 cut(s)	81, 720, 771
BfmI	CTRYAG	1 cut(s)	230
BisI	GCNGC	6 cut(s)	76, 227, 230, 311, 431, 550
BlsI	GCNGC	6 cut(s)	77, 228, 231, 312, 432, 551
Bme18I	GGWCC	1 cut(s)	781
BmeT110I	CYCGRG	1 cut(s)	604
BmgBI	CACGTC	1 cut(s)	116
BmgT120I	GGNCC	3 cut(s)	194, 481, 781
BmiI	GGNNCC	3 cut(s)	151, 482, 526
BmrI	ACTGGG	2 cut(s)	711, 876
BmsI	GCATC	3 cut(s)	213, 360, 605
BmuI	ACTGGG	2 cut(s)	711, 876
BpiI	GAAGAC	1 cut(s)	543
BplI	GAGNNNNNCTC	4 cut(s)	137, 169, 150, 182
Bpu10I	CCTNAGC	1 cut(s)	293
Bsa29I	ATCGAT	1 cut(s)	339
BsaHI	GRCGYC	1 cut(s)	85
BsaJI	CCNNGG	3 cut(s)	141, 694, 896
BsaWI	WCCGGW	1 cut(s)	155
Bse1I	ACTGG	2 cut(s)	706, 871
BseAI	TCCGGA	1 cut(s)	155
BseCI	ATCGAT	1 cut(s)	339
BseDI	CCNNGG	3 cut(s)	141, 694, 896
BseGI	GGATG	2 cut(s)	25, 876
BseMII	CTCAG	1 cut(s)	798
BseNI	ACTGG	2 cut(s)	706, 871
BseRI	GAGGAG	1 cut(s)	100
BseSI	GKGCMC	1 cut(s)	851
BseXI	GCAGC	6 cut(s)	87, 216, 238, 322, 442, 561
BseYI	CCCAGC	1 cut(s)	170
BsgI	GTGCAG	3 cut(s)	43, 329, 847
BshFI	GGCC	3 cut(s)	196, 483, 713
BshNI	GGYRCC	1 cut(s)	524
BshVI	ATCGAT	1 cut(s)	339
BsiHKAI	GWGCWC	1 cut(s)	891
BsiHKCI	CYCGRG	1 cut(s)	604
BsiSI	CCGG	2 cut(s)	156, 374
BslFI	GGGAC	1 cut(s)	102
BsmAI	GTCTC	1 cut(s)	194
BsmBI	CGTCTC	1 cut(s)	194
BsmFI	GGGAC	1 cut(s)	102
BsnI	GGCC	3 cut(s)	196, 483, 713
BsoBI	CYCGRG	1 cut(s)	604
Bsp1286I	GDGCHC	2 cut(s)	851, 891
Bsp13I	TCCGGA	1 cut(s)	155
Bsp143I	GATC	2 cut(s)	583, 904
BspACI	CCGC	3 cut(s)	304, 316, 784
BspANI	GGCC	3 cut(s)	196, 483, 713
BspCNI	CTCAG	1 cut(s)	799
BspDI	ATCGAT	1 cut(s)	339
BspEI	TCCGGA	1 cut(s)	155
BspLI	GGNNCC	3 cut(s)	151, 482, 526
BspMAI	CTGCAG	1 cut(s)	234
BspPI	GGATC	2 cut(s)	578, 899
BspQI	GCTCTTC	1 cut(s)	282
BspT107I	GGYRCC	1 cut(s)	524
BsrI	ACTGG	2 cut(s)	706, 871
BssECI	CCNNGG	3 cut(s)	141, 694, 896
BssMI	GATC	2 cut(s)	583, 904
BssNI	GRCGYC	1 cut(s)	85
BssT1I	CCWWGG	1 cut(s)	141
Bst4CI	ACNGT	2 cut(s)	205, 466
Bst6I	CTCTTC	3 cut(s)	70, 282, 351
BstACI	GRCGYC	1 cut(s)	85
BstAPI	GCANNNNNTGC	1 cut(s)	690
BstC8I	GCNNGC	5 cut(s)	260, 349, 554, 883, 887
BstDEI	CTNAG	2 cut(s)	293, 807
BstDSI	CCRYGG	2 cut(s)	694, 896
BstF5I	GGATG	2 cut(s)	25, 876
BstHHI	GCGC	1 cut(s)	264
BstKTI	GATC	2 cut(s)	586, 907
BstMAI	GTCTC	1 cut(s)	194
BstMBI	GATC	2 cut(s)	583, 904
BstMWI	GCNNNNNNNGC	4 cut(s)	84, 310, 690, 855
BstNSI	RCATGY	2 cut(s)	556, 858
BstSFI	CTRYAG	1 cut(s)	230
BstSLI	GKGCMC	1 cut(s)	851
BstV1I	GCAGC	6 cut(s)	87, 216, 238, 322, 442, 561
BstV2I	GAAGAC	1 cut(s)	543
BstX2I	RGATCY	1 cut(s)	904
BstXI	CCANNNNNNTGG	1 cut(s)	701
BstYI	RGATCY	1 cut(s)	904
Bsu15I	ATCGAT	1 cut(s)	339
BsuRI	GGCC	3 cut(s)	196, 483, 713
BsuTUI	ATCGAT	1 cut(s)	339
BtgI	CCRYGG	2 cut(s)	694, 896
BtrI	CACGTC	1 cut(s)	116
BtsCI	GGATG	2 cut(s)	25, 876
BtsI	GCAGTG	1 cut(s)	621
BtsIMutI	CAGTG	2 cut(s)	621, 864
Cac8I	GCNNGC	5 cut(s)	260, 349, 554, 883, 887
CfoI	GCGC	1 cut(s)	264
Cfr13I	GGNCC	3 cut(s)	194, 481, 781
ClaI	ATCGAT	1 cut(s)	339
CpoI	CGGWCCG	1 cut(s)	781
CseI	GACGC	2 cut(s)	93, 765
Csp6I	GTAC	3 cut(s)	206, 525, 706
CspI	CGGWCCG	1 cut(s)	781
CviAII	CATG	5 cut(s)	283, 407, 553, 844, 855
CviQI	GTAC	3 cut(s)	206, 525, 706
DdeI	CTNAG	2 cut(s)	293, 807
DpnI	GATC	2 cut(s)	585, 906
DpnII	GATC	2 cut(s)	583, 904
Eam1104I	CTCTTC	3 cut(s)	70, 282, 351
EarI	CTCTTC	3 cut(s)	70, 282, 351
Eco130I	CCWWGG	1 cut(s)	141
Eco32I	GATATC	2 cut(s)	337, 459
Eco47I	GGWCC	1 cut(s)	781
Eco88I	CYCGRG	1 cut(s)	604
EcoO109I	RGGNCCY	1 cut(s)	481
EcoRV	GATATC	2 cut(s)	337, 459
EcoT14I	CCWWGG	1 cut(s)	141
EcoT22I	ATGCAT	1 cut(s)	558
ErhI	CCWWGG	1 cut(s)	141
Esp3I	CGTCTC	1 cut(s)	194
FaeI	CATG	5 cut(s)	286, 410, 556, 847, 858
FaqI	GGGAC	1 cut(s)	102
FatI	CATG	5 cut(s)	282, 406, 552, 843, 854
FauI	CCCGC	1 cut(s)	297
Fnu4HI	GCNGC	6 cut(s)	76, 227, 230, 311, 431, 550
FokI	GGATG	2 cut(s)	12, 883
Fsp4HI	GCNGC	6 cut(s)	76, 227, 230, 311, 431, 550
FspBI	CTAG	3 cut(s)	81, 720, 771
GlaI	GCGC	1 cut(s)	263
GluI	GCNGC	6 cut(s)	76, 227, 230, 311, 431, 550
GsaI	CCCAGC	1 cut(s)	174
HaeIII	GGCC	3 cut(s)	196, 483, 713
HapII	CCGG	2 cut(s)	156, 374
HgaI	GACGC	2 cut(s)	93, 765
HhaI	GCGC	1 cut(s)	264
Hin1I	GRCGYC	1 cut(s)	85
Hin1II	CATG	5 cut(s)	286, 410, 556, 847, 858
Hin6I	GCGC	1 cut(s)	262
HinP1I	GCGC	1 cut(s)	262
HinfI	GANTC	2 cut(s)	359, 767
HpaII	CCGG	2 cut(s)	156, 374
HphI	GGTGA	1 cut(s)	97
Hpy188I	TCNGA	2 cut(s)	222, 781
Hpy188III	TCNNGA	3 cut(s)	156, 242, 253
Hpy99I	CGWCG	1 cut(s)	781
HpyAV	CCTTC	2 cut(s)	45, 185
HpyCH4III	ACNGT	2 cut(s)	205, 466
HpyCH4IV	ACGT	2 cut(s)	115, 497
HpyCH4V	TGCA	9 cut(s)	60, 226, 232, 310, 491, 556, 568, 684, 864
HpyF10VI	GCNNNNNNNGC	4 cut(s)	84, 310, 690, 855
HpyF3I	CTNAG	2 cut(s)	293, 807
HpySE526I	ACGT	2 cut(s)	115, 497
Hsp92I	GRCGYC	1 cut(s)	85
Hsp92II	CATG	5 cut(s)	286, 410, 556, 847, 858
HspAI	GCGC	1 cut(s)	262
Kpn2I	TCCGGA	1 cut(s)	155
KpnI	GGTACC	1 cut(s)	528
Kzo9I	GATC	2 cut(s)	583, 904
LguI	GCTCTTC	1 cut(s)	282
LmnI	GCTCC	1 cut(s)	255
Lsp1109I	GCAGC	6 cut(s)	87, 216, 238, 322, 442, 561
LweI	GCATC	3 cut(s)	213, 360, 605
MaeI	CTAG	3 cut(s)	81, 720, 771
MaeII	ACGT	2 cut(s)	115, 497
MaeIII	GTNAC	1 cut(s)	409
MalI	GATC	2 cut(s)	585, 906
MboI	GATC	2 cut(s)	583, 904
MboII	GAAGA	6 cut(s)	57, 269, 299, 368, 548, 685
MflI	RGATCY	1 cut(s)	904
MhlI	GDGCHC	2 cut(s)	851, 891
MluCI	AATT	7 cut(s)	51, 101, 237, 468, 509, 569, 820
MlyI	GAGTC	1 cut(s)	368
MmeI	TCCRAC	2 cut(s)	480, 759
Mph1103I	ATGCAT	1 cut(s)	558
MroI	TCCGGA	1 cut(s)	155
MseI	TTAA	1 cut(s)	572
MslI	CAYNNNNRTG	2 cut(s)	323, 869
MspA1I	CMGCKG	1 cut(s)	229
MspI	CCGG	2 cut(s)	156, 374
MwoI	GCNNNNNNNGC	4 cut(s)	84, 310, 690, 855
NdeII	GATC	2 cut(s)	583, 904
NlaIII	CATG	5 cut(s)	286, 410, 556, 847, 858
NlaIV	GGNNCC	3 cut(s)	151, 482, 526
NmuCI	GTSAC	1 cut(s)	409
NsiI	ATGCAT	1 cut(s)	558
NspI	RCATGY	2 cut(s)	556, 858
PaeI	GCATGC	1 cut(s)	556
PciSI	GCTCTTC	1 cut(s)	282
PfeI	GAWTC	1 cut(s)	767
PkrI	GCNGC	6 cut(s)	77, 228, 231, 312, 432, 551
PleI	GAGTC	1 cut(s)	367
PpsI	GAGTC	1 cut(s)	367
PspFI	CCCAGC	1 cut(s)	170
PspN4I	GGNNCC	3 cut(s)	151, 482, 526
PspPI	GGNCC	3 cut(s)	194, 481, 781
PstI	CTGCAG	1 cut(s)	234
PsuI	RGATCY	1 cut(s)	904
PvuII	CAGCTG	1 cut(s)	229
RsaI	GTAC	3 cut(s)	207, 526, 707
RsaNI	GTAC	3 cut(s)	206, 525, 706
RseI	CAYNNNNRTG	2 cut(s)	323, 869
Rsr2I	CGGWCCG	1 cut(s)	781
RsrII	CGGWCCG	1 cut(s)	781
SapI	GCTCTTC	1 cut(s)	282
SaqAI	TTAA	1 cut(s)	572
SatI	GCNGC	6 cut(s)	76, 227, 230, 311, 431, 550
Sau3AI	GATC	2 cut(s)	583, 904
Sau96I	GGNCC	3 cut(s)	194, 481, 781
SchI	GAGTC	1 cut(s)	368
SduI	GDGCHC	2 cut(s)	851, 891
SfaNI	GCATC	3 cut(s)	213, 360, 605
SfcI	CTRYAG	1 cut(s)	230
SinI	GGWCC	1 cut(s)	781
SmiMI	CAYNNNNRTG	2 cut(s)	323, 869
SphI	GCATGC	1 cut(s)	556
Sse9I	AATT	7 cut(s)	51, 101, 237, 468, 509, 569, 820
SsiI	CCGC	3 cut(s)	304, 316, 784
SspMI	CTAG	3 cut(s)	81, 720, 771
StyI	CCWWGG	1 cut(s)	141
TaaI	ACNGT	2 cut(s)	205, 466
TaiI	ACGT	2 cut(s)	118, 500
TaqI	TCGA	1 cut(s)	339
TasI	AATT	7 cut(s)	51, 101, 237, 468, 509, 569, 820
TfiI	GAWTC	1 cut(s)	767
Tru1I	TTAA	1 cut(s)	572
Tru9I	TTAA	1 cut(s)	572
TscAI	CASTG	2 cut(s)	621, 871
TseFI	GTSAC	1 cut(s)	409
TseI	GCWGC	6 cut(s)	75, 226, 229, 310, 430, 549
Tsp45I	GTSAC	1 cut(s)	409
TspDTI	ATGAA	2 cut(s)	532, 549
TspGWI	ACGGA	2 cut(s)	711, 913
TspRI	CASTG	2 cut(s)	621, 871
VpaK11BI	GGWCC	1 cut(s)	781
XapI	RAATTY	3 cut(s)	51, 101, 237
XceI	RCATGY	2 cut(s)	556, 858
XspI	CTAG	3 cut(s)	81, 720, 771
Zsp2I	ATGCAT	1 cut(s)	558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.