Prupe.7G113400_v2.0.a1

Zinc finger A20 and AN1 domain-containing stress-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0009919
Physical Location & Seq
Reverse (-)
13923125 .. 13925001
1877 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G113400.1

Sequence Viewer

Length: 552 bp
ATGGCAGAAGAGCACCGATGCCAAGCGCCCGAAGGCCTCCGTCTCTGCGCGAACAACTGCGGCTTCTTCGGCAGCCCGGCCACAATGAACCTCTGCTCTAAATGCTACCGGGACTTTTGCCTCAAAGAGCAACAAGAGGCTTCGATCAAATCCACAGTCGAAGCTTCTCTCTCCGCCTCTTCTTCCTCCTCTGTCTCTGCTCCTTCTTCTTCATCGACTTCCTCTTCCTTTTCTCCGGTGATCGAGACCCTCTGTCAGCCTCCTCCTCCGGCGTTGACCTTGCCGGAGGTGGCCGGAGACGTAGTCGGACACAGCGCCGGAGATGTCCGGCCTCCTGAGGCGGTTGCGGTGGTCTCGCAGCCGAACCGGTGCACCGTGTGCAGGAAACGTGTCGGGCTGACCGGGTTCAAGTGCAGGTGCGGGACCACATTCTGTGGGGTCCACAGGTACCCGGAGAAGCACGCGTGTTCGTTTGATTTCAAGACGCTTGGGAGAGAGGAGATCGCCAGAAGCAACCCCTTGGTCATAGCCGAGAAGCTCGAGAAGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-A20 zf-AN1

Protein Analysis

184

Amino Acids

19.56

Weight (kDa)

7.95

Isoelectric Point (pI)

58.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 405
Acc36I ACCTGC 1 cut(s) 405
Acc65I GGTACC 1 cut(s) 447
AccB1I GGYRCC 1 cut(s) 447
AccII CGCG 2 cut(s) 50, 464
AciI CCGC 5 cut(s) 60, 174, 341, 347, 420
AcoI YGGCCR 2 cut(s) 78, 291
AdeI CACNNNGTG 1 cut(s) 378
AfaI GTAC 1 cut(s) 449
AfiI CCNNNNNNNGG 1 cut(s) 381
AflIII ACRYGT 2 cut(s) 388, 462
AgeI ACCGGT 1 cut(s) 366
AgsI TTSAA 2 cut(s) 409, 481
AhdI GACNNNNNGTC 1 cut(s) 252
AluBI AGCT 2 cut(s) 164, 538
AluI AGCT 2 cut(s) 164, 538
Alw21I GWGCWC 2 cut(s) 15, 374
Alw26I GTCTC 5 cut(s) 47, 199, 239, 291, 358
Alw44I GTGCAC 1 cut(s) 370
Ama87I CYCGRG 1 cut(s) 539
AoxI GGCC 4 cut(s) 34, 78, 291, 329
ApaLI GTGCAC 1 cut(s) 370
ApeKI GCWGC 2 cut(s) 72, 358
ArsI GACNNNNNNTTYG 2 cut(s) 141, 173
AsiGI ACCGGT 1 cut(s) 366
Asp718I GGTACC 1 cut(s) 447
AspLEI GCGC 3 cut(s) 28, 50, 317
AspS9I GGNCC 2 cut(s) 423, 439
AsuC2I CCSGG 4 cut(s) 77, 110, 403, 452
AsuHPI GGTGA 1 cut(s) 250
AvaI CYCGRG 1 cut(s) 539
AvaII GGWCC 2 cut(s) 423, 439
AxyI CCTNAGG 1 cut(s) 336
BaeGI GKGCMC 1 cut(s) 374
BanI GGYRCC 1 cut(s) 447
Bbv12I GWGCWC 2 cut(s) 15, 374
BbvI GCAGC 2 cut(s) 84, 370
BcnI CCSGG 4 cut(s) 77, 110, 403, 452
BcoDI GTCTC 5 cut(s) 47, 199, 239, 291, 358
BfoI RGCGCY 2 cut(s) 29, 318
BfuAI ACCTGC 1 cut(s) 405
BisI GCNGC 3 cut(s) 61, 73, 359
BlsI GCNGC 3 cut(s) 62, 74, 360
Bme1390I CCNGG 4 cut(s) 77, 110, 403, 452
Bme18I GGWCC 2 cut(s) 423, 439
BmeRI GACNNNNNGTC 1 cut(s) 252
BmeT110I CYCGRG 1 cut(s) 539
BmgT120I GGNCC 2 cut(s) 423, 439
BmiI GGNNCC 3 cut(s) 424, 440, 449
BmrFI CCNGG 4 cut(s) 77, 110, 403, 452
BmsI GCATC 1 cut(s) 8
BpuMI CCSGG 4 cut(s) 77, 110, 403, 452
BsaI GGTCTC 2 cut(s) 239, 358
BsaJI CCNNGG 1 cut(s) 519
BsaWI WCCGGW 2 cut(s) 235, 366
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 1 cut(s) 381
Bse118I RCCGGY 1 cut(s) 366
Bse21I CCTNAGG 1 cut(s) 336
BseDI CCNNGG 1 cut(s) 519
BseLI CCNNNNNNNGG 1 cut(s) 381
BseMII CTCAG 1 cut(s) 327
BseRI GAGGAG 4 cut(s) 178, 252, 255, 512
BseSI GKGCMC 1 cut(s) 374
BseXI GCAGC 2 cut(s) 84, 370
BsgI GTGCAG 2 cut(s) 400, 433
Bsh1236I CGCG 2 cut(s) 50, 464
BshFI GGCC 4 cut(s) 36, 80, 293, 331
BshNI GGYRCC 1 cut(s) 447
BshTI ACCGGT 1 cut(s) 366
BsiHKAI GWGCWC 2 cut(s) 15, 374
BsiHKCI CYCGRG 1 cut(s) 539
BslFI GGGAC 2 cut(s) 125, 436
BslI CCNNNNNNNGG 1 cut(s) 381
BsmAI GTCTC 5 cut(s) 47, 199, 239, 291, 358
BsmBI CGTCTC 2 cut(s) 47, 291
BsmFI GGGAC 2 cut(s) 125, 436
BsnI GGCC 4 cut(s) 36, 80, 293, 331
Bso31I GGTCTC 2 cut(s) 239, 358
BsoBI CYCGRG 1 cut(s) 539
Bsp1286I GDGCHC 2 cut(s) 15, 374
Bsp143I GATC 3 cut(s) 144, 240, 501
BspACI CCGC 5 cut(s) 60, 174, 341, 347, 420
BspANI GGCC 4 cut(s) 36, 80, 293, 331
BspCNI CTCAG 1 cut(s) 328
BspFNI CGCG 2 cut(s) 50, 464
BspLI GGNNCC 3 cut(s) 424, 440, 449
BspMI ACCTGC 1 cut(s) 405
BspQI GCTCTTC 1 cut(s) 3
BspT107I GGYRCC 1 cut(s) 447
BspTNI GGTCTC 2 cut(s) 239, 358
BsrFI RCCGGY 1 cut(s) 366
BssAI RCCGGY 1 cut(s) 366
BssECI CCNNGG 1 cut(s) 519
BssMI GATC 3 cut(s) 144, 240, 501
BssT1I CCWWGG 1 cut(s) 519
Bst4CI ACNGT 2 cut(s) 157, 376
Bst6I CTCTTC 3 cut(s) 3, 184, 229
BstAPI GCANNNNNTGC 1 cut(s) 378
BstC8I GCNNGC 1 cut(s) 462
BstDEI CTNAG 1 cut(s) 336
BstFNI CGCG 2 cut(s) 50, 464
BstH2I RGCGCY 2 cut(s) 29, 318
BstHHI GCGC 3 cut(s) 28, 50, 317
BstKTI GATC 3 cut(s) 147, 243, 504
BstMAI GTCTC 5 cut(s) 47, 199, 239, 291, 358
BstMBI GATC 3 cut(s) 144, 240, 501
BstMWI GCNNNNNNNGC 3 cut(s) 69, 102, 378
BstSCI CCNGG 4 cut(s) 75, 108, 401, 450
BstSLI GKGCMC 1 cut(s) 374
BstUI CGCG 2 cut(s) 50, 464
BstV1I GCAGC 2 cut(s) 84, 370
Bsu36I CCTNAGG 1 cut(s) 336
BsuRI GGCC 4 cut(s) 36, 80, 293, 331
BveI ACCTGC 1 cut(s) 405
Cac8I GCNNGC 1 cut(s) 462
CfoI GCGC 3 cut(s) 28, 50, 317
Cfr10I RCCGGY 1 cut(s) 366
Cfr13I GGNCC 2 cut(s) 423, 439
CseI GACGC 1 cut(s) 493
Csp6I GTAC 1 cut(s) 448
CspAI ACCGGT 1 cut(s) 366
CviQI GTAC 1 cut(s) 448
DdeI CTNAG 1 cut(s) 336
DpnI GATC 3 cut(s) 146, 242, 503
DpnII GATC 3 cut(s) 144, 240, 501
DraIII CACNNNGTG 1 cut(s) 378
DriI GACNNNNNGTC 1 cut(s) 252
EaeI YGGCCR 2 cut(s) 78, 291
Eam1104I CTCTTC 3 cut(s) 3, 184, 229
Eam1105I GACNNNNNGTC 1 cut(s) 252
EarI CTCTTC 3 cut(s) 3, 184, 229
EciI GGCGGA 1 cut(s) 163
Eco130I CCWWGG 1 cut(s) 519
Eco147I AGGCCT 1 cut(s) 36
Eco31I GGTCTC 2 cut(s) 239, 358
Eco47I GGWCC 2 cut(s) 423, 439
Eco81I CCTNAGG 1 cut(s) 336
Eco88I CYCGRG 1 cut(s) 539
EcoT14I CCWWGG 1 cut(s) 519
ErhI CCWWGG 1 cut(s) 519
Esp3I CGTCTC 2 cut(s) 47, 291
FaiI YATR 2 cut(s) 527, 550
FaqI GGGAC 2 cut(s) 125, 436
FauI CCCGC 1 cut(s) 413
Fnu4HI GCNGC 3 cut(s) 61, 73, 359
Fsp4HI GCNGC 3 cut(s) 61, 73, 359
GlaI GCGC 3 cut(s) 27, 49, 316
GluI GCNGC 3 cut(s) 61, 73, 359
HaeII RGCGCY 2 cut(s) 29, 318
HaeIII GGCC 4 cut(s) 36, 80, 293, 331
HgaI GACGC 1 cut(s) 493
HhaI GCGC 3 cut(s) 28, 50, 317
Hin6I GCGC 3 cut(s) 26, 48, 315
HinP1I GCGC 3 cut(s) 26, 48, 315
HincII GTYRAC 1 cut(s) 276
HindII GTYRAC 1 cut(s) 276
HindIII AAGCTT 1 cut(s) 162
HphI GGTGA 1 cut(s) 250
Hpy166II GTNNAC 3 cut(s) 276, 372, 442
Hpy188I TCNGA 1 cut(s) 308
Hpy188III TCNNGA 4 cut(s) 244, 335, 481, 541
Hpy8I GTNNAC 3 cut(s) 276, 372, 442
HpyAV CCTTC 2 cut(s) 26, 213
HpyCH4III ACNGT 2 cut(s) 157, 376
HpyCH4IV ACGT 2 cut(s) 300, 388
HpyCH4V TGCA 3 cut(s) 372, 381, 414
HpyF10VI GCNNNNNNNGC 3 cut(s) 69, 102, 378
HpyF3I CTNAG 1 cut(s) 336
HpySE526I ACGT 2 cut(s) 300, 388
HspAI GCGC 3 cut(s) 26, 48, 315
KpnI GGTACC 1 cut(s) 451
Kzo9I GATC 3 cut(s) 144, 240, 501
LguI GCTCTTC 1 cut(s) 3
LmnI GCTCC 1 cut(s) 205
Lsp1109I GCAGC 2 cut(s) 84, 370
LweI GCATC 1 cut(s) 8
MaeII ACGT 2 cut(s) 300, 388
MalI GATC 3 cut(s) 146, 242, 503
MboI GATC 3 cut(s) 144, 240, 501
MboII GAAGA 7 cut(s) 20, 58, 171, 174, 198, 201, 216
MhlI GDGCHC 2 cut(s) 15, 374
MluI ACGCGT 1 cut(s) 462
MmeI TCCRAC 1 cut(s) 286
MspR9I CCNGG 4 cut(s) 77, 110, 403, 452
MvnI CGCG 2 cut(s) 50, 464
MwoI GCNNNNNNNGC 3 cut(s) 69, 102, 378
NciI CCSGG 4 cut(s) 77, 110, 403, 452
NdeII GATC 3 cut(s) 144, 240, 501
NlaIV GGNNCC 3 cut(s) 424, 440, 449
PaeR7I CTCGAG 1 cut(s) 539
PaqCI CACCTGC 1 cut(s) 405
PceI AGGCCT 1 cut(s) 36
PciSI GCTCTTC 1 cut(s) 3
PflFI GACNNNGTC 1 cut(s) 302
PinAI ACCGGT 1 cut(s) 366
PkrI GCNGC 3 cut(s) 62, 74, 360
PspN4I GGNNCC 3 cut(s) 424, 440, 449
PspPI GGNCC 2 cut(s) 423, 439
PsyI GACNNNGTC 1 cut(s) 302
RsaI GTAC 1 cut(s) 449
RsaNI GTAC 1 cut(s) 448
SapI GCTCTTC 1 cut(s) 3
SatI GCNGC 3 cut(s) 61, 73, 359
Sau3AI GATC 3 cut(s) 144, 240, 501
Sau96I GGNCC 2 cut(s) 423, 439
ScrFI CCNGG 4 cut(s) 77, 110, 403, 452
SduI GDGCHC 2 cut(s) 15, 374
SetI ASST 9 cut(s) 93, 166, 281, 291, 303, 391, 419, 449, 540
SfaNI GCATC 1 cut(s) 8
Sfr274I CTCGAG 1 cut(s) 539
SinI GGWCC 2 cut(s) 423, 439
SlaI CTCGAG 1 cut(s) 539
SmlI CTYRAG 1 cut(s) 539
SmoI CTYRAG 1 cut(s) 539
SseBI AGGCCT 1 cut(s) 36
SsiI CCGC 5 cut(s) 60, 174, 341, 347, 420
StuI AGGCCT 1 cut(s) 36
StyD4I CCNGG 4 cut(s) 75, 108, 401, 450
StyI CCWWGG 1 cut(s) 519
TaaI ACNGT 2 cut(s) 157, 376
TaiI ACGT 2 cut(s) 303, 391
TaqI TCGA 5 cut(s) 143, 159, 215, 243, 540
TauI GCSGC 1 cut(s) 63
TseI GCWGC 2 cut(s) 72, 358
TspDTI ATGAA 2 cut(s) 101, 201
TspGWI ACGGA 1 cut(s) 29
Tth111I GACNNNGTC 1 cut(s) 302
VneI GTGCAC 1 cut(s) 370
VpaK11BI GGWCC 2 cut(s) 423, 439
XhoI CTCGAG 1 cut(s) 539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.