Rorug03G0129300

Zinc finger A20 and AN1 domain-containing stress-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0009919
Physical Location & Seq
Forward (+)
10499188 .. 10501645
2458 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0129300.1

Sequence Viewer

Length: 2412 bp
ATGGCACACCAAACTGTTGTTTCATCTTCAAAATTGACTTGTTTTTTTATGTTTGTATTTTCCCTCTGTTTTGCAACCGCAAATACCCTGAACAGAGGCTCTTCGCTTTTGGTGAAAAATGCTCATTCAGACTTGCTAACTTCCCCAGACAAATCATTTACGTGTGGATTCTATGGGGTACCGGGTAGAAATGCCTATTGGTTCTCCATATGGTTCACAAATTCCAAAGATAAAACCGTTGTTTGGATGGCTAACAGAGACAGACCCGTTGGCCTGGAATCCAGAGTTTCGTTGCGTCGAGATGGCTCCATGGTCTTGATTAATCATGTGGATTTCAGTCATTTCACAACCATAATCTGGGAGACCAGCACCGGCTCCACTGGTGTTGACAGAGCGGAGCTTCTGAATTCTGGCAGCCTTGTTCTGAAAGACCCAAATGGTACAATTCTGTGGCAAAGCTTTGATTTTCCCACTGATACTCTCCTCCCAAACCAACCATTTACAAAAAGCAGCACTCTGGTATCGAATTTAGGAAGAGGGAATTTTGGTGCTGGATATTTCAATTTCTATTTTGATAATGATAATGTTTTGAAGTTGATGTATGATGGTCCTGACATTTCAAGCTTGTATTGGCCCGACCCTGGTTATAGTGTGTCTGAGAATGGTAGATATTCTGTCAATAGTAGTAGAATTGCTGTTTTAGATGAACTTGGTAGTTTTTCTTCTAGTGATGAACTGCAGTTCAGTGCTATCGACATGGGTTCGAGAGTGAAAAGGCGGTTGACAATGGATTATGATGGAAATCTAAGACTTTATAGTCTTAATAGCTCAACGGGATTGTGGGTGATCACATGGCAAGCTATGGCGAAGCCTTGTAAGGTTCATGGAATTTGTGGGAGAAATGGGATTTGCATTTATACTCCAGCACCCAAGTGTTCATGTCCTCCTGGCTATGAAGCAGTCGATGCAAGTAACTTGAACTTGGGCTGCAAGCCTAAATTCAAGCGTACATGCTCGAAGTCCCAAGAGGAGAAATTCGTGCAGATTCCGCAAGTAAATTTCTATGGATCTGATCTCAATTTTAGTGAAGCAGTTTCAATTGATGATTGCAGACAGCTCTGCTTGGGGGATTGCCGGTGTGAGGCATTTAGCTATTGGCTAAATGGGGAAGGGAGGTGTTACACCAAAAGTGTTCTTTTCAATGGCTACAAGTCTCCGGATTTTTGGGACACTATATACTTGAGAATGCCTGTGAGTTTCAGTGTGAATACATCAAAACCCCAATATTCCAATGCCTCTATTCCATGCAAGACCAATGGTCCTGCAATGTATGGCACTACCGGTAAAAGGGTGAGATGGGTATATCTGTATAGTTTTGCTTTTGCAGTTGGTGCTGTTGAGTTTCTTTTTATAGTATCAGGTAGGTGGCTACTTTTCAGAAGACATGGTAGTGCTGTAACTCCTGTGGAAGTCGGATATCGTGTGATTTCAAGTCAATTTAGAAGGTTTCGCTTCAATGAGCTCAAGAATGCAACCAAAAACTTCCAGGAAGAGCTGGGAAGAGGGGCTTCAGGGTCTGTCTATAAGGGTGTTCTGGAGGATGAAAGAGTAGTGGCTGTCAAGAAATTGGCAGATATTCATCAAGGGGAAGATGTGTTTTGGGCAGAAGTAAGCACAATTGGCAAAATCAATCACATGAATCTAGTGAGAATTTGGGGATTTTGCTCGGAAGATAAGCAGAGACTACTGGTTTCTGAGTTTGTTGAAAATGGGTCTTTGGACAAGCACTTGTTCACCTCAAATTTACTTGGATGGAAAGAGAGGTATAAAGTTGCACTAGGGATAGCAAAGGGTTTAGCCTATCTTCACCATGAATGTCTGGAATGGGTTATACATTGTGACGTGAAGCCTGAAAATATACTCCTAGACAGTGATTTTGAGCCAAAGATTGCAGATTTTGGGCTAGCAAAGCTAACTCAGAGAGATAGGCTCATTTCAATGTTCTCTCAGATCCGAGGAACAAAAGGTTATATGGCCCCGGAGTGGGCTATGAACCTTCGAATTACTGCAAAGGTTGATGTTTACAGTTATGGGGTGGTCATCCTGGAGATAGTGAAGGGCATTCGACTTACAAGTTGGGTGCTGGAGGATATTGAAGAGGAGCAAGAAGCAGAGCTTACTAAGTTTGTGAGGGAAGCCAAAAGGAAAATTCAACAAGGGGAAGAGTTGTTGATAGAGGATGTTGCTGATCCAAGACTAGAAGGGCAGTTCAGCAGGAACCAAGCAGCAAAGATGGTTGAAATTGGCATTGCCTGTGTGGAGGAAGATAGGAGCAAAAGACCAACAATGGATTCAGTGGTAAAAAGTTTGCTAGAATGTGAAGATGAATCTTACATTCATTCTTCACATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-A20 zf-AN1

Protein Analysis

803

Amino Acids

90.7

Weight (kDa)

6.91

Isoelectric Point (pI)

32.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 79 - 169 2.3e-19 D-mannose binding lectin
S_locus_glycop PF00954 242 - 320 6.2e-11 S-locus glycoprotein domain
PAN_2 PF08276 338 - 395 1.9e-06 PAN-like domain
PK_Tyr_Ser-Thr PF07714 515 - 790 4.9e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 516 - 788 2e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 816
Acc65I GGTACC 1 cut(s) 178
AccB1I GGYRCC 1 cut(s) 178
AccB7I CCANNNNNTGG 1 cut(s) 357
AccBSI CCGCTC 1 cut(s) 395
AccIII TCCGGA 1 cut(s) 1216
AciI CCGC 4 cut(s) 78, 395, 778, 1049
AclWI GGATC 3 cut(s) 1075, 2005, 2243
AcuI CTGAAG 1 cut(s) 1554
AfaI GTAC 3 cut(s) 180, 442, 1009
AfiI CCNNNNNNNGG 7 cut(s) 243, 357, 641, 1141, 1347, 2043, 2044
AflIII ACRYGT 1 cut(s) 161
AgeI ACCGGT 1 cut(s) 1340
AhdI GACNNNNNGTC 1 cut(s) 1317
AjiI CACGTC 1 cut(s) 1903
AjnI CCWGG 5 cut(s) 273, 640, 946, 1545, 2103
AjuI GAANNNNNNNTTGG 4 cut(s) 181, 213, 2335, 2367
AleI CACNNNNGTG 1 cut(s) 931
Alw21I GWGCWC 1 cut(s) 1524
Alw26I GTCTC 4 cut(s) 252, 356, 1218, 1735
AlwI GGATC 3 cut(s) 1075, 2005, 2243
AlwNI CAGNNNCTG 1 cut(s) 1577
Aor13HI TCCGGA 1 cut(s) 1216
AoxI GGCC 3 cut(s) 271, 632, 2034
ApeKI GCWGC 4 cut(s) 414, 510, 987, 2285
ArsI GACNNNNNNTTYG 2 cut(s) 1919, 1951
AseI ATTAAT 1 cut(s) 321
AsiGI ACCGGT 1 cut(s) 1340
Asp718I GGTACC 1 cut(s) 178
AspS9I GGNCC 4 cut(s) 608, 633, 1319, 2035
AsuC2I CCSGG 2 cut(s) 183, 2039
AsuHPI GGTGA 5 cut(s) 124, 856, 1363, 1786, 1859
AsuII TTCGAA 1 cut(s) 2059
AsuNHI GCTAGC 1 cut(s) 1963
AvaII GGWCC 2 cut(s) 608, 1319
BaeI ACNNNNGTAYC 2 cut(s) 504, 537
BanI GGYRCC 1 cut(s) 178
BanII GRGCYC 1 cut(s) 1524
BarI GAAGNNNNNNTAC 2 cut(s) 706, 738
BbsI GAAGAC 1 cut(s) 1447
Bbv12I GWGCWC 1 cut(s) 1524
BbvI GCAGC 4 cut(s) 426, 522, 974, 2297
BccI CCATC 7 cut(s) 241, 296, 599, 791, 1350, 1806, 2287
BciT130I CCWGG 5 cut(s) 275, 642, 948, 1547, 2105
BclI TGATCA 1 cut(s) 846
BcnI CCSGG 2 cut(s) 183, 2039
BcoDI GTCTC 4 cut(s) 252, 356, 1218, 1735
BfaI CTAG 7 cut(s) 726, 1703, 1838, 1925, 1964, 2258, 2372
BfmI CTRYAG 1 cut(s) 737
BisI GCNGC 4 cut(s) 415, 511, 988, 2286
BlsI GCNGC 4 cut(s) 416, 512, 989, 2287
Bme1390I CCNGG 7 cut(s) 183, 275, 642, 948, 1547, 2039, 2105
Bme18I GGWCC 2 cut(s) 608, 1319
BmeRI GACNNNNNGTC 1 cut(s) 1317
BmgBI CACGTC 1 cut(s) 1903
BmgT120I GGNCC 4 cut(s) 608, 633, 1319, 2035
BmiI GGNNCC 5 cut(s) 180, 307, 376, 2037, 2279
BmrFI CCNGG 7 cut(s) 183, 275, 642, 948, 1547, 2039, 2105
BmsI GCATC 1 cut(s) 955
BmtI GCTAGC 1 cut(s) 1967
BpiI GAAGAC 1 cut(s) 1447
BplI GAGNNNNNCTC 2 cut(s) 1974, 2006
BpmI CTGGAG 4 cut(s) 906, 1616, 2126, 2165
Bpu14I TTCGAA 1 cut(s) 2059
BpuEI CTTGAG 2 cut(s) 1261, 1508
BpuMI CCSGG 2 cut(s) 183, 2039
BsaAI YACGTR 1 cut(s) 162
BsaBI GATNNNNATC 2 cut(s) 801, 1638
BsaI GGTCTC 1 cut(s) 356
BsaJI CCNNGG 4 cut(s) 309, 640, 2014, 2037
BsaWI WCCGGW 2 cut(s) 1216, 1340
Bsc4I CCNNNNNNNGG 7 cut(s) 243, 357, 641, 1141, 1347, 2043, 2044
Bse118I RCCGGY 3 cut(s) 371, 1134, 1340
Bse1I ACTGG 2 cut(s) 385, 1752
Bse3DI GCAATG 2 cut(s) 1332, 2307
Bse8I GATNNNNATC 2 cut(s) 801, 1638
BseAI TCCGGA 1 cut(s) 1216
BseBI CCWGG 5 cut(s) 275, 642, 948, 1547, 2105
BseDI CCNNGG 4 cut(s) 309, 640, 2014, 2037
BseGI GGATG 5 cut(s) 252, 1606, 1817, 2100, 2245
BseJI GATNNNNATC 2 cut(s) 801, 1638
BseLI CCNNNNNNNGG 7 cut(s) 243, 357, 641, 1141, 1347, 2043, 2044
BseMI GCAATG 2 cut(s) 1332, 2307
BseMII CTCAG 4 cut(s) 648, 1746, 1991, 2021
BseNI ACTGG 2 cut(s) 385, 1752
BseRI GAGGAG 3 cut(s) 473, 1043, 2174
BseXI GCAGC 4 cut(s) 426, 522, 974, 2297
BseYI CCCAGC 1 cut(s) 1555
BsgI GTGCAG 1 cut(s) 1061
BshFI GGCC 3 cut(s) 273, 634, 2036
BshNI GGYRCC 1 cut(s) 178
BshTI ACCGGT 1 cut(s) 1340
BsiHKAI GWGCWC 1 cut(s) 1524
BsiSI CCGG 6 cut(s) 182, 372, 1135, 1217, 1341, 2039
BslFI GGGAC 2 cut(s) 1006, 1241
BslI CCNNNNNNNGG 7 cut(s) 243, 357, 641, 1141, 1347, 2043, 2044
BsmAI GTCTC 4 cut(s) 252, 356, 1218, 1735
BsmFI GGGAC 2 cut(s) 1006, 1241
BsmI GAATGC 3 cut(s) 1251, 1534, 2121
BsnI GGCC 3 cut(s) 273, 634, 2036
Bso31I GGTCTC 1 cut(s) 356
Bsp119I TTCGAA 1 cut(s) 2059
Bsp1286I GDGCHC 1 cut(s) 1524
Bsp13I TCCGGA 1 cut(s) 1216
Bsp143I GATC 5 cut(s) 846, 1067, 1072, 2010, 2248
Bsp19I CCATGG 1 cut(s) 309
BspACI CCGC 4 cut(s) 78, 395, 778, 1049
BspANI GGCC 3 cut(s) 273, 634, 2036
BspCNI CTCAG 4 cut(s) 649, 1747, 1990, 2020
BspEI TCCGGA 1 cut(s) 1216
BspLI GGNNCC 5 cut(s) 180, 307, 376, 2037, 2279
BspMAI CTGCAG 1 cut(s) 741
BspOI GCTAGC 1 cut(s) 1967
BspPI GGATC 3 cut(s) 1075, 2005, 2243
BspQI GCTCTTC 2 cut(s) 106, 1545
BspT104I TTCGAA 1 cut(s) 2059
BspT107I GGYRCC 1 cut(s) 178
BspTNI GGTCTC 1 cut(s) 356
BsrBI CCGCTC 1 cut(s) 395
BsrDI GCAATG 2 cut(s) 1332, 2307
BsrFI RCCGGY 3 cut(s) 371, 1134, 1340
BsrI ACTGG 2 cut(s) 385, 1752
BssAI RCCGGY 3 cut(s) 371, 1134, 1340
BssECI CCNNGG 4 cut(s) 309, 640, 2014, 2037
BssMI GATC 5 cut(s) 846, 1067, 1072, 2010, 2248
BssT1I CCWWGG 1 cut(s) 309
Bst2UI CCWGG 5 cut(s) 275, 642, 948, 1547, 2105
Bst4CI ACNGT 4 cut(s) 16, 238, 1931, 2087
Bst6I CTCTTC 6 cut(s) 106, 529, 1545, 1555, 2151, 2217
BstAPI GCANNNNNTGC 2 cut(s) 965, 1391
BstBAI YACGTR 1 cut(s) 162
BstBI TTCGAA 1 cut(s) 2059
BstC8I GCNNGC 3 cut(s) 858, 992, 1965
BstDEI CTNAG 6 cut(s) 657, 806, 1755, 1977, 2007, 2181
BstDSI CCRYGG 1 cut(s) 309
BstF5I GGATG 5 cut(s) 252, 1606, 1817, 2100, 2245
BstKTI GATC 5 cut(s) 849, 1070, 1075, 2013, 2251
BstMAI GTCTC 4 cut(s) 252, 356, 1218, 1735
BstMBI GATC 5 cut(s) 846, 1067, 1072, 2010, 2248
BstMWI GCNNNNNNNGC 5 cut(s) 965, 1048, 1391, 1680, 1969
BstNI CCWGG 5 cut(s) 275, 642, 948, 1547, 2105
BstNSI RCATGY 1 cut(s) 1014
BstSCI CCNGG 7 cut(s) 181, 273, 640, 946, 1545, 2037, 2103
BstSFI CTRYAG 1 cut(s) 737
BstV1I GCAGC 4 cut(s) 426, 522, 974, 2297
BstV2I GAAGAC 1 cut(s) 1447
BstX2I RGATCY 2 cut(s) 1067, 2010
BstYI RGATCY 2 cut(s) 1067, 2010
BsuRI GGCC 3 cut(s) 273, 634, 2036
BtgI CCRYGG 1 cut(s) 309
BtrI CACGTC 1 cut(s) 1903
BtsCI GGATG 5 cut(s) 252, 1606, 1817, 2100, 2245
BtsIMutI CAGTG 6 cut(s) 378, 471, 751, 1267, 1936, 2361
Cac8I GCNNGC 3 cut(s) 858, 992, 1965
CaiI CAGNNNCTG 1 cut(s) 1577
Cfr10I RCCGGY 3 cut(s) 371, 1134, 1340
Cfr13I GGNCC 4 cut(s) 608, 633, 1319, 2035
CseI GACGC 1 cut(s) 284
Csp6I GTAC 3 cut(s) 179, 441, 1008
CspAI ACCGGT 1 cut(s) 1340
CspCI CAANNNNNGTGG 2 cut(s) 367, 402
CviQI GTAC 3 cut(s) 179, 441, 1008
DdeI CTNAG 6 cut(s) 657, 806, 1755, 1977, 2007, 2181
DpnI GATC 5 cut(s) 848, 1069, 1074, 2012, 2250
DpnII GATC 5 cut(s) 846, 1067, 1072, 2010, 2248
DrdI GACNNNNNNGTC 1 cut(s) 816
DriI GACNNNNNGTC 1 cut(s) 1317
DseDI GACNNNNNNGTC 1 cut(s) 816
Eam1104I CTCTTC 6 cut(s) 106, 529, 1545, 1555, 2151, 2217
Eam1105I GACNNNNNGTC 1 cut(s) 1317
EarI CTCTTC 6 cut(s) 106, 529, 1545, 1555, 2151, 2217
Ecl136II GAGCTC 1 cut(s) 1522
Eco130I CCWWGG 1 cut(s) 309
Eco24I GRGCYC 1 cut(s) 1524
Eco31I GGTCTC 1 cut(s) 356
Eco32I GATATC 1 cut(s) 1478
Eco47I GGWCC 2 cut(s) 608, 1319
Eco53kI GAGCTC 1 cut(s) 1522
Eco57I CTGAAG 1 cut(s) 1554
EcoICRI GAGCTC 1 cut(s) 1522
EcoRI GAATTC 1 cut(s) 406
EcoRII CCWGG 5 cut(s) 273, 640, 946, 1545, 2103
EcoRV GATATC 1 cut(s) 1478
EcoT14I CCWWGG 1 cut(s) 309
EcoT38I GRGCYC 1 cut(s) 1524
ErhI CCWWGG 1 cut(s) 309
FalI AAGNNNNNCTT 4 cut(s) 1552, 1584, 2160, 2192
FaqI GGGAC 2 cut(s) 1006, 1241
FauNDI CATATG 1 cut(s) 209
FbaI TGATCA 1 cut(s) 846
Fnu4HI GCNGC 4 cut(s) 415, 511, 988, 2286
FokI GGATG 5 cut(s) 259, 1613, 1824, 2087, 2252
FriOI GRGCYC 1 cut(s) 1524
Fsp4HI GCNGC 4 cut(s) 415, 511, 988, 2286
FspBI CTAG 7 cut(s) 726, 1703, 1838, 1925, 1964, 2258, 2372
GluI GCNGC 4 cut(s) 415, 511, 988, 2286
GsaI CCCAGC 1 cut(s) 1559
GsuI CTGGAG 4 cut(s) 906, 1616, 2126, 2165
HaeIII GGCC 3 cut(s) 273, 634, 2036
HapII CCGG 6 cut(s) 182, 372, 1135, 1217, 1341, 2039
HgaI GACGC 1 cut(s) 284
HincII GTYRAC 2 cut(s) 388, 783
HindII GTYRAC 2 cut(s) 388, 783
HindIII AAGCTT 2 cut(s) 457, 622
HinfI GANTC 6 cut(s) 168, 278, 1045, 1699, 2351, 2387
HpaII CCGG 6 cut(s) 182, 372, 1135, 1217, 1341, 2039
HphI GGTGA 5 cut(s) 124, 856, 1363, 1786, 1859
Hpy166II GTNNAC 5 cut(s) 216, 388, 783, 1794, 2083
Hpy8I GTNNAC 5 cut(s) 216, 388, 783, 1794, 2083
Hpy99I CGWCG 1 cut(s) 300
HpyAV CCTTC 5 cut(s) 1163, 1497, 2066, 2110, 2255
HpyCH4III ACNGT 4 cut(s) 16, 238, 1931, 2087
HpyCH4IV ACGT 2 cut(s) 161, 1902
HpyF10VI GCNNNNNNNGC 5 cut(s) 965, 1048, 1391, 1680, 1969
HpyF3I CTNAG 6 cut(s) 657, 806, 1755, 1977, 2007, 2181
HpySE526I ACGT 2 cut(s) 161, 1902
Kpn2I TCCGGA 1 cut(s) 1216
KpnI GGTACC 1 cut(s) 182
Ksp22I TGATCA 1 cut(s) 846
Kzo9I GATC 5 cut(s) 846, 1067, 1072, 2010, 2248
LguI GCTCTTC 2 cut(s) 106, 1545
LmnI GCTCC 5 cut(s) 311, 380, 397, 2161, 2331
Lsp1109I GCAGC 4 cut(s) 426, 522, 974, 2297
LweI GCATC 1 cut(s) 955
MaeI CTAG 7 cut(s) 726, 1703, 1838, 1925, 1964, 2258, 2372
MaeII ACGT 2 cut(s) 161, 1902
MaeIII GTNAC 4 cut(s) 971, 1178, 1456, 1898
MalI GATC 5 cut(s) 848, 1069, 1074, 2012, 2250
MbiI CCGCTC 1 cut(s) 395
MboI GATC 5 cut(s) 846, 1067, 1072, 2010, 2248
MfeI CAATTG 2 cut(s) 1098, 1677
MflI RGATCY 2 cut(s) 1067, 2010
MhlI GDGCHC 1 cut(s) 1524
MmeI TCCRAC 1 cut(s) 1453
MroI TCCGGA 1 cut(s) 1216
MseI TTAA 2 cut(s) 321, 822
MslI CAYNNNNRTG 4 cut(s) 160, 931, 1449, 1997
MspI CCGG 6 cut(s) 182, 372, 1135, 1217, 1341, 2039
MspR9I CCNGG 7 cut(s) 183, 275, 642, 948, 1547, 2039, 2105
MunI CAATTG 2 cut(s) 1098, 1677
Mva1269I GAATGC 3 cut(s) 1251, 1534, 2121
MvaI CCWGG 5 cut(s) 275, 642, 948, 1547, 2105
MwoI GCNNNNNNNGC 5 cut(s) 965, 1048, 1391, 1680, 1969
NciI CCSGG 2 cut(s) 183, 2039
NcoI CCATGG 1 cut(s) 309
NdeI CATATG 1 cut(s) 209
NdeII GATC 5 cut(s) 846, 1067, 1072, 2010, 2248
NheI GCTAGC 1 cut(s) 1963
NlaIV GGNNCC 5 cut(s) 180, 307, 376, 2037, 2279
NmuCI GTSAC 1 cut(s) 1898
NspI RCATGY 1 cut(s) 1014
NspV TTCGAA 1 cut(s) 2059
OliI CACNNNNGTG 1 cut(s) 931
PciSI GCTCTTC 2 cut(s) 106, 1545
PctI GAATGC 3 cut(s) 1251, 1534, 2121
PfeI GAWTC 6 cut(s) 168, 278, 1045, 1699, 2351, 2387
PflMI CCANNNNNTGG 1 cut(s) 357
PfoI TCCNGGA 2 cut(s) 1545, 2103
PinAI ACCGGT 1 cut(s) 1340
PkrI GCNGC 4 cut(s) 416, 512, 989, 2287
Ppu21I YACGTR 1 cut(s) 162
PshBI ATTAAT 1 cut(s) 321
Psp124BI GAGCTC 1 cut(s) 1524
Psp6I CCWGG 5 cut(s) 273, 640, 946, 1545, 2103
PspFI CCCAGC 1 cut(s) 1555
PspGI CCWGG 5 cut(s) 273, 640, 946, 1545, 2103
PspN4I GGNNCC 5 cut(s) 180, 307, 376, 2037, 2279
PspPI GGNCC 4 cut(s) 608, 633, 1319, 2035
PstI CTGCAG 1 cut(s) 741
PstNI CAGNNNCTG 1 cut(s) 1577
PsuI RGATCY 2 cut(s) 1067, 2010
RsaI GTAC 3 cut(s) 180, 442, 1009
RsaNI GTAC 3 cut(s) 179, 441, 1008
RseI CAYNNNNRTG 4 cut(s) 160, 931, 1449, 1997
SacI GAGCTC 1 cut(s) 1524
SapI GCTCTTC 2 cut(s) 106, 1545
SaqAI TTAA 2 cut(s) 321, 822
SatI GCNGC 4 cut(s) 415, 511, 988, 2286
Sau3AI GATC 5 cut(s) 846, 1067, 1072, 2010, 2248
Sau96I GGNCC 4 cut(s) 608, 633, 1319, 2035
ScrFI CCNGG 7 cut(s) 183, 275, 642, 948, 1547, 2039, 2105
SduI GDGCHC 1 cut(s) 1524
SfaNI GCATC 1 cut(s) 955
SfcI CTRYAG 1 cut(s) 737
SfuI TTCGAA 1 cut(s) 2059
SinI GGWCC 2 cut(s) 608, 1319
SmiMI CAYNNNNRTG 4 cut(s) 160, 931, 1449, 1997
SmlI CTYRAG 2 cut(s) 1240, 1523
SmoI CTYRAG 2 cut(s) 1240, 1523
SsiI CCGC 4 cut(s) 78, 395, 778, 1049
SspI AATATT 1 cut(s) 1286
SspMI CTAG 7 cut(s) 726, 1703, 1838, 1925, 1964, 2258, 2372
SstI GAGCTC 1 cut(s) 1524
StyD4I CCNGG 7 cut(s) 181, 273, 640, 946, 1545, 2037, 2103
StyI CCWWGG 1 cut(s) 309
TaaI ACNGT 4 cut(s) 16, 238, 1931, 2087
TaiI ACGT 2 cut(s) 164, 1905
TaqI TCGA 8 cut(s) 298, 524, 753, 764, 963, 1016, 2059, 2125
TfiI GAWTC 6 cut(s) 168, 278, 1045, 1699, 2351, 2387
Tru1I TTAA 2 cut(s) 321, 822
Tru9I TTAA 2 cut(s) 321, 822
TscAI CASTG 6 cut(s) 385, 478, 751, 1267, 1936, 2361
TseFI GTSAC 1 cut(s) 1898
TseI GCWGC 4 cut(s) 414, 510, 987, 2285
Tsp45I GTSAC 1 cut(s) 1898
TspRI CASTG 6 cut(s) 385, 478, 751, 1267, 1936, 2361
Van91I CCANNNNNTGG 1 cut(s) 357
VpaK11BI GGWCC 2 cut(s) 608, 1319
VspI ATTAAT 1 cut(s) 321
XceI RCATGY 1 cut(s) 1014
XspI CTAG 7 cut(s) 726, 1703, 1838, 1925, 1964, 2258, 2372
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.