Prupe.7G163600_v2.0.a1

Protein SHI RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
16853454 .. 16859419
5966 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G163600.1

Sequence Viewer

Length: 1188 bp
ATGGCTGGTTTTTTCTCGTTAGGCAGAGGCGGCAACAACAACAACCAAGATCAAGACCACCATAACAGCAATAACCCACCCCCACCTGATCATCAAATTGCTCCGGAGACGTTGTTCTGGTACAAGAATGAGGACGTGGCAGCTCAGCCGTACAAAGGGTTCGAGCTATGGCAGCAACAAGAGCAGCTCCTCCAGCTCCAAACCCAGCCACCACGCCTCTTCCACCACCACCCCCATCACCATCAAGATCTCTACGCATCCGCTGCCGCTCTAGGCGTGGGGCCGAGCAGCAGGGGCTCGGATGACACGTCGTCGTCGCGGTCGGCCGCCGCGTTGATGATGATGAGGTCGTCCTCCAGCGGAGGCGCAGGTGGAAGCGGAGGAGGAAGCGCCAGCTGTCAAGACTGCGGAAACCAAGCCAAAAAAGATTGCATTCACATGAGGTGCCGGACTTGCTGCAAGAGCCGAGGGTTCGACTGCCCGACCCACGTGAAGAGCACGTGGGTTCCGGCGTCGAAGCGCCGCGAGCGGCAGCAACAGCTCATGGCTTTGCAGCAGCAGCAGCAACAACAGCAGCAAGAACATCATCAACAACGACAGCAGCAGCAGCAGCAGCTGCAAGTGATTCGGGGAGAGAATTCCAAGAGGCTGAGAGAAAATCCAAACTCCAATTCTTCCCTTCGCATTCTCGGCAACACGTCAGGGTTGGAGTTGGGGAATTTTCCGGCAGAAGTGAGCTCGCCCGCGGTGTTTCGCTGCGTAAGAGTGAGCTCCATCGAGGACGACGATGATCAGTACGCGTATCAGACGGCTGTGAACATAGGAGGCCATTTGTTTAAAGGAATTCTCTACGACCAAGGCCCCGAAACCTCTAACTACAACATGAACATGGCTGCTGCAGCTGAAACTTCATCTGGTGGCGGTGGAGTTAATATCCAGCCGCTCAATCTCATTGCTGGCGCCACCACCGCCGCCAACACAGCCACCATTGGCGGCGGTGATGACGAGGGCGTGGCGGGGGCTTCCACGACAGTTATAGATCCTTCTTCTCTATACCCAGCTCCACTTAATACATACATGGCTGAAGGCCTTTTCTTCCGACATGTTTACGGCTGGGAATATAAAGCAATTGTGTTACTACAGTGGCGCCATGTGATGCAGCTGTTTTTTTGTGGCTTCTTTCCCTAG

Protein Analysis

396

Amino Acids

43.31

Weight (kDa)

6.45

Isoelectric Point (pI)

59.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 359
Acc36I ACCTGC 1 cut(s) 359
AccB1I GGYRCC 3 cut(s) 444, 959, 1146
AccBSI CCGCTC 3 cut(s) 269, 529, 943
AccII CGCG 5 cut(s) 319, 332, 525, 746, 800
AccIII TCCGGA 1 cut(s) 103
AclWI GGATC 1 cut(s) 1034
AcoI YGGCCR 1 cut(s) 324
AcsI RAATTY 3 cut(s) 637, 718, 843
AcuI CTGAAG 1 cut(s) 1104
AcvI CACGTG 2 cut(s) 490, 501
AcyI GRCGYC 3 cut(s) 512, 960, 1147
AfaI GTAC 3 cut(s) 122, 152, 797
AfiI CCNNNNNNNGG 1 cut(s) 155
AflIII ACRYGT 4 cut(s) 306, 696, 798, 1102
AhdI GACNNNNNGTC 1 cut(s) 310
AjiI CACGTC 3 cut(s) 136, 309, 699
AjuI GAANNNNNNNTTGG 2 cut(s) 655, 687
AloI GAACNNNNNNTCC 2 cut(s) 98, 130
Alw21I GWGCWC 3 cut(s) 500, 740, 773
Alw26I GTCTC 1 cut(s) 101
AlwI GGATC 1 cut(s) 1034
AlwNI CAGNNNCTG 1 cut(s) 616
Aor13HI TCCGGA 1 cut(s) 103
AoxI GGCC 5 cut(s) 281, 324, 826, 859, 1087
ApoI RAATTY 3 cut(s) 637, 718, 843
AspLEI GCGC 5 cut(s) 368, 392, 522, 962, 1149
AspS9I GGNCC 2 cut(s) 281, 860
AsuHPI GGTGA 2 cut(s) 230, 1010
BanI GGYRCC 3 cut(s) 444, 959, 1146
BanII GRGCYC 3 cut(s) 299, 740, 773
BbrPI CACGTG 2 cut(s) 490, 501
Bbv12I GWGCWC 3 cut(s) 500, 740, 773
BccI CCATC 3 cut(s) 243, 249, 782
BceAI ACGGC 3 cut(s) 133, 825, 1126
BcgI CGANNNNNNTGC 2 cut(s) 608, 642
BclI TGATCA 2 cut(s) 88, 790
BcoDI GTCTC 1 cut(s) 101
BfaI CTAG 2 cut(s) 272, 1186
BfmI CTRYAG 2 cut(s) 897, 1139
BfoI RGCGCY 4 cut(s) 393, 523, 963, 1150
BfuAI ACCTGC 1 cut(s) 359
BglII AGATCT 1 cut(s) 247
BlpI GCTNAGC 1 cut(s) 144
BmeRI GACNNNNNGTC 1 cut(s) 310
BmgBI CACGTC 3 cut(s) 136, 309, 699
BmgT120I GGNCC 2 cut(s) 281, 860
BmiI GGNNCC 6 cut(s) 282, 446, 507, 862, 961, 1148
BmsI GCATC 2 cut(s) 266, 1146
BpmI CTGGAG 2 cut(s) 176, 340
Bpu1102I GCTNAGC 1 cut(s) 144
BsaAI YACGTR 2 cut(s) 490, 501
BsaHI GRCGYC 3 cut(s) 512, 960, 1147
BsaJI CCNNGG 3 cut(s) 466, 744, 856
BsaWI WCCGGW 1 cut(s) 103
BsaXI ACNNNNNCTCC 2 cut(s) 98, 128
Bsc4I CCNNNNNNNGG 1 cut(s) 155
Bse3DI GCAATG 1 cut(s) 951
BseAI TCCGGA 1 cut(s) 103
BseDI CCNNGG 3 cut(s) 466, 744, 856
BseGI GGATG 2 cut(s) 257, 307
BseLI CCNNNNNNNGG 1 cut(s) 155
BseMI GCAATG 1 cut(s) 951
BseMII CTCAG 2 cut(s) 158, 641
BseRI GAGGAG 2 cut(s) 179, 396
BseX3I CGGCCG 1 cut(s) 324
BseYI CCCAGC 3 cut(s) 204, 1057, 1113
Bsh1236I CGCG 5 cut(s) 319, 332, 525, 746, 800
Bsh1285I CGRYCG 2 cut(s) 323, 327
BshFI GGCC 5 cut(s) 283, 326, 828, 861, 1089
BshNI GGYRCC 3 cut(s) 444, 959, 1146
BsiEI CGRYCG 2 cut(s) 323, 327
BsiHKAI GWGCWC 3 cut(s) 500, 740, 773
BsiSI CCGG 4 cut(s) 104, 448, 509, 725
BslI CCNNNNNNNGG 1 cut(s) 155
BsmAI GTCTC 1 cut(s) 101
BsmBI CGTCTC 1 cut(s) 101
BsmI GAATGC 2 cut(s) 432, 684
BsnI GGCC 5 cut(s) 283, 326, 828, 861, 1089
Bsp1286I GDGCHC 4 cut(s) 299, 500, 740, 773
Bsp13I TCCGGA 1 cut(s) 103
Bsp143I GATC 5 cut(s) 49, 88, 247, 790, 1039
Bsp1720I GCTNAGC 1 cut(s) 144
BspANI GGCC 5 cut(s) 283, 326, 828, 861, 1089
BspCNI CTCAG 2 cut(s) 157, 642
BspEI TCCGGA 1 cut(s) 103
BspFNI CGCG 5 cut(s) 319, 332, 525, 746, 800
BspLI GGNNCC 6 cut(s) 282, 446, 507, 862, 961, 1148
BspMAI CTGCAG 1 cut(s) 901
BspMI ACCTGC 1 cut(s) 359
BspPI GGATC 1 cut(s) 1034
BspQI GCTCTTC 1 cut(s) 488
BspT107I GGYRCC 3 cut(s) 444, 959, 1146
BsrBI CCGCTC 3 cut(s) 269, 529, 943
BsrDI GCAATG 1 cut(s) 951
BssECI CCNNGG 3 cut(s) 466, 744, 856
BssMI GATC 5 cut(s) 49, 88, 247, 790, 1039
BssNI GRCGYC 3 cut(s) 512, 960, 1147
BssT1I CCWWGG 1 cut(s) 856
Bst4CI ACNGT 2 cut(s) 1033, 1143
Bst6I CTCTTC 2 cut(s) 224, 488
BstACI GRCGYC 3 cut(s) 512, 960, 1147
BstAPI GCANNNNNTGC 2 cut(s) 263, 616
BstBAI YACGTR 2 cut(s) 490, 501
BstC8I GCNNGC 5 cut(s) 394, 527, 740, 744, 958
BstDEI CTNAG 2 cut(s) 144, 650
BstDSI CCRYGG 1 cut(s) 744
BstF5I GGATG 2 cut(s) 257, 307
BstFNI CGCG 5 cut(s) 319, 332, 525, 746, 800
BstH2I RGCGCY 4 cut(s) 393, 523, 963, 1150
BstHHI GCGC 5 cut(s) 368, 392, 522, 962, 1149
BstKTI GATC 5 cut(s) 52, 91, 250, 793, 1042
BstMAI GTCTC 1 cut(s) 101
BstMBI GATC 5 cut(s) 49, 88, 247, 790, 1039
BstMCI CGRYCG 2 cut(s) 323, 327
BstNSI RCATGY 1 cut(s) 1106
BstSFI CTRYAG 2 cut(s) 897, 1139
BstUI CGCG 5 cut(s) 319, 332, 525, 746, 800
BstX2I RGATCY 2 cut(s) 247, 1039
BstYI RGATCY 2 cut(s) 247, 1039
BstZI CGGCCG 1 cut(s) 324
BsuRI GGCC 5 cut(s) 283, 326, 828, 861, 1089
BtgI CCRYGG 1 cut(s) 744
BtrI CACGTC 3 cut(s) 136, 309, 699
BtsCI GGATG 2 cut(s) 257, 307
BtsIMutI CAGTG 1 cut(s) 1148
BveI ACCTGC 1 cut(s) 359
Cac8I GCNNGC 5 cut(s) 394, 527, 740, 744, 958
CaiI CAGNNNCTG 1 cut(s) 616
CfoI GCGC 5 cut(s) 368, 392, 522, 962, 1149
Cfr13I GGNCC 2 cut(s) 281, 860
Cfr42I CCGCGG 1 cut(s) 747
CseI GACGC 1 cut(s) 501
Csp6I GTAC 3 cut(s) 121, 151, 796
CviAII CATG 7 cut(s) 439, 544, 883, 889, 1078, 1103, 1151
CviQI GTAC 3 cut(s) 121, 151, 796
DdeI CTNAG 2 cut(s) 144, 650
DinI GGCGCC 2 cut(s) 961, 1148
DpnI GATC 5 cut(s) 51, 90, 249, 792, 1041
DpnII GATC 5 cut(s) 49, 88, 247, 790, 1039
DraI TTTAAA 1 cut(s) 838
DriI GACNNNNNGTC 1 cut(s) 310
EaeI YGGCCR 1 cut(s) 324
EagI CGGCCG 1 cut(s) 324
Eam1104I CTCTTC 2 cut(s) 224, 488
Eam1105I GACNNNNNGTC 1 cut(s) 310
EarI CTCTTC 2 cut(s) 224, 488
Ecl136II GAGCTC 2 cut(s) 738, 771
EclXI CGGCCG 1 cut(s) 324
Eco130I CCWWGG 1 cut(s) 856
Eco147I AGGCCT 1 cut(s) 1089
Eco24I GRGCYC 3 cut(s) 299, 740, 773
Eco52I CGGCCG 1 cut(s) 324
Eco53kI GAGCTC 2 cut(s) 738, 771
Eco57I CTGAAG 1 cut(s) 1104
Eco72I CACGTG 2 cut(s) 490, 501
EcoICRI GAGCTC 2 cut(s) 738, 771
EcoO109I RGGNCCY 1 cut(s) 860
EcoRI GAATTC 2 cut(s) 637, 843
EcoT14I CCWWGG 1 cut(s) 856
EcoT38I GRGCYC 3 cut(s) 299, 740, 773
EgeI GGCGCC 2 cut(s) 961, 1148
EheI GGCGCC 2 cut(s) 961, 1148
ErhI CCWWGG 1 cut(s) 856
Esp3I CGTCTC 1 cut(s) 101
FaeI CATG 7 cut(s) 442, 547, 886, 892, 1081, 1106, 1154
FatI CATG 7 cut(s) 438, 543, 882, 888, 1077, 1102, 1150
FauI CCCGC 2 cut(s) 751, 1009
FbaI TGATCA 2 cut(s) 88, 790
FokI GGATG 2 cut(s) 244, 314
FriOI GRGCYC 3 cut(s) 299, 740, 773
FspBI CTAG 2 cut(s) 272, 1186
GlaI GCGC 5 cut(s) 367, 391, 521, 961, 1148
GsaI CCCAGC 3 cut(s) 208, 1061, 1117
GsuI CTGGAG 2 cut(s) 176, 340
HaeII RGCGCY 4 cut(s) 393, 523, 963, 1150
HaeIII GGCC 5 cut(s) 283, 326, 828, 861, 1089
HapII CCGG 4 cut(s) 104, 448, 509, 725
HgaI GACGC 1 cut(s) 501
HhaI GCGC 5 cut(s) 368, 392, 522, 962, 1149
Hin1I GRCGYC 3 cut(s) 512, 960, 1147
Hin1II CATG 7 cut(s) 442, 547, 886, 892, 1081, 1106, 1154
Hin6I GCGC 5 cut(s) 366, 390, 520, 960, 1147
HinP1I GCGC 5 cut(s) 366, 390, 520, 960, 1147
HinfI GANTC 1 cut(s) 625
HpaII CCGG 4 cut(s) 104, 448, 509, 725
HphI GGTGA 2 cut(s) 230, 1010
Hpy166II GTNNAC 2 cut(s) 817, 1108
Hpy188I TCNGA 3 cut(s) 301, 807, 1100
Hpy188III TCNNGA 4 cut(s) 53, 104, 245, 401
Hpy8I GTNNAC 2 cut(s) 817, 1108
Hpy99I CGWCG 5 cut(s) 313, 316, 319, 517, 788
HpyAV CCTTC 3 cut(s) 689, 1053, 1079
HpyCH4III ACNGT 2 cut(s) 1033, 1143
HpyCH4IV ACGT 6 cut(s) 110, 135, 308, 489, 500, 698
HpyCH4V TGCA 6 cut(s) 432, 459, 553, 619, 899, 1159
HpyF3I CTNAG 2 cut(s) 144, 650
HpySE526I ACGT 6 cut(s) 110, 135, 308, 489, 500, 698
Hsp92I GRCGYC 3 cut(s) 512, 960, 1147
Hsp92II CATG 7 cut(s) 442, 547, 886, 892, 1081, 1106, 1154
HspAI GCGC 5 cut(s) 366, 390, 520, 960, 1147
KasI GGCGCC 2 cut(s) 959, 1146
Kpn2I TCCGGA 1 cut(s) 103
Ksp22I TGATCA 2 cut(s) 88, 790
KspI CCGCGG 1 cut(s) 747
Kzo9I GATC 5 cut(s) 49, 88, 247, 790, 1039
LguI GCTCTTC 1 cut(s) 488
LmnI GCTCC 5 cut(s) 106, 192, 201, 776, 1066
LweI GCATC 2 cut(s) 266, 1146
MaeI CTAG 2 cut(s) 272, 1186
MaeII ACGT 6 cut(s) 110, 135, 308, 489, 500, 698
MaeIII GTNAC 1 cut(s) 1134
MalI GATC 5 cut(s) 51, 90, 249, 792, 1041
MbiI CCGCTC 3 cut(s) 269, 529, 943
MboI GATC 5 cut(s) 49, 88, 247, 790, 1039
MboII GAAGA 5 cut(s) 211, 505, 666, 1038, 1087
MfeI CAATTG 1 cut(s) 1128
MflI RGATCY 2 cut(s) 247, 1039
MhlI GDGCHC 4 cut(s) 299, 500, 740, 773
MluCI AATT 6 cut(s) 96, 637, 670, 718, 843, 1128
MluI ACGCGT 1 cut(s) 798
Mly113I GGCGCC 2 cut(s) 960, 1147
MmeI TCCRAC 2 cut(s) 687, 1123
MroI TCCGGA 1 cut(s) 103
MseI TTAA 3 cut(s) 837, 930, 1068
MslI CAYNNNNRTG 2 cut(s) 437, 887
MspA1I CMGCKG 7 cut(s) 263, 360, 396, 616, 746, 902, 1162
MspI CCGG 4 cut(s) 104, 448, 509, 725
MunI CAATTG 1 cut(s) 1128
Mva1269I GAATGC 2 cut(s) 432, 684
MvnI CGCG 5 cut(s) 319, 332, 525, 746, 800
NarI GGCGCC 2 cut(s) 960, 1147
NdeII GATC 5 cut(s) 49, 88, 247, 790, 1039
NlaIII CATG 7 cut(s) 442, 547, 886, 892, 1081, 1106, 1154
NlaIV GGNNCC 6 cut(s) 282, 446, 507, 862, 961, 1148
NmeAIII GCCGAG 3 cut(s) 309, 491, 669
NspI RCATGY 1 cut(s) 1106
PaqCI CACCTGC 1 cut(s) 359
PceI AGGCCT 1 cut(s) 1089
PciI ACATGT 1 cut(s) 1102
PciSI GCTCTTC 1 cut(s) 488
PcsI WCGNNNNNNNCGW 3 cut(s) 305, 329, 783
PctI GAATGC 2 cut(s) 432, 684
PfeI GAWTC 1 cut(s) 625
PluTI GGCGCC 2 cut(s) 963, 1150
PmaCI CACGTG 2 cut(s) 490, 501
PmlI CACGTG 2 cut(s) 490, 501
Ppu21I YACGTR 2 cut(s) 490, 501
PscI ACATGT 1 cut(s) 1102
Psp124BI GAGCTC 2 cut(s) 740, 773
PspCI CACGTG 2 cut(s) 490, 501
PspFI CCCAGC 3 cut(s) 204, 1057, 1113
PspN4I GGNNCC 6 cut(s) 282, 446, 507, 862, 961, 1148
PspPI GGNCC 2 cut(s) 281, 860
PsrI GAACNNNNNNTAC 2 cut(s) 143, 175
PstI CTGCAG 1 cut(s) 901
PstNI CAGNNNCTG 1 cut(s) 616
PsuI RGATCY 2 cut(s) 247, 1039
PvuII CAGCTG 4 cut(s) 396, 616, 902, 1162
RsaI GTAC 3 cut(s) 122, 152, 797
RsaNI GTAC 3 cut(s) 121, 151, 796
RseI CAYNNNNRTG 2 cut(s) 437, 887
SacI GAGCTC 2 cut(s) 740, 773
SacII CCGCGG 1 cut(s) 747
SapI GCTCTTC 1 cut(s) 488
SaqAI TTAA 3 cut(s) 837, 930, 1068
Sau3AI GATC 5 cut(s) 49, 88, 247, 790, 1039
Sau96I GGNCC 2 cut(s) 281, 860
SduI GDGCHC 4 cut(s) 299, 500, 740, 773
SfaNI GCATC 2 cut(s) 266, 1146
SfcI CTRYAG 2 cut(s) 897, 1139
SfoI GGCGCC 2 cut(s) 961, 1148
Sfr303I CCGCGG 1 cut(s) 747
SgrBI CCGCGG 1 cut(s) 747
SmiMI CAYNNNNRTG 2 cut(s) 437, 887
Sse9I AATT 6 cut(s) 96, 637, 670, 718, 843, 1128
SseBI AGGCCT 1 cut(s) 1089
SspDI GGCGCC 2 cut(s) 959, 1146
SspMI CTAG 2 cut(s) 272, 1186
SstI GAGCTC 2 cut(s) 740, 773
StuI AGGCCT 1 cut(s) 1089
StyI CCWWGG 1 cut(s) 856
TaaI ACNGT 2 cut(s) 1033, 1143
TaiI ACGT 6 cut(s) 113, 138, 311, 492, 503, 701
TaqI TCGA 4 cut(s) 162, 474, 515, 777
TasI AATT 6 cut(s) 96, 637, 670, 718, 843, 1128
TauI GCSGC 9 cut(s) 33, 269, 329, 332, 525, 532, 943, 974, 996
TfiI GAWTC 1 cut(s) 625
Tru1I TTAA 3 cut(s) 837, 930, 1068
Tru9I TTAA 3 cut(s) 837, 930, 1068
TscAI CASTG 1 cut(s) 1148
TspDTI ATGAA 2 cut(s) 899, 900
TspRI CASTG 1 cut(s) 1148
XapI RAATTY 3 cut(s) 637, 718, 843
XceI RCATGY 1 cut(s) 1106
XspI CTAG 2 cut(s) 272, 1186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.