Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010755

Physical Location & Seq

Genomic Coordinates Reverse (-)

17449750 .. 17452406

Gene Structure 2657 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G174900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 876 bp

ATGGCGGTTAAGCCAAGGCACGCGCGCCTTCAGACTCGCAAAACATCGTCTTCTTCCTCCACGCTGGTCCTCACTTTGCTCGTCATGTTCACTTTCGTGATCCTCATTCTTCTCGCCCTTGGAATACTCTCGGTCCCGAGCGGCTCCTCTGGCAACTCGGCCAAGGCAAACGATCTCAGCTCGATTGTACGGAAGAGCGCCGACAGAAATGAAGAAGAAGGGGCAGGGGAGCAGTGGGTCGAAGTCATCTCATGGGAGCCGAGAGCATTTGTCTATCACAATTTCTTGACCAAGGAGGAATGTGAATATCTAATCGATCTTGCCAAACCTAGTATGCACAAGTCAACAGTAGTTGATAGTGAAACTGGAAAGAGCAAAGATAGCAGGGTCCGCACAAGCTCTGGAACATTTTTGCAAAGAGGGCGCGATAAAATTATCAGGAACATTGAGAAGAGAATTGCTAATTTCACCTTTTTACCTGTAGAACACGGGGAGGGACTTCAAGTTCTCCACTATGAAGTTGGACAGAAGTATGAGCCTCACTATGACTACTTTCAAGATGAGTTCAACACTAGGAATGGAGGTCAACGTATAGCCACGGTTCTCATGTACCTCTCAGATGTTGAAGAAGGGGGTGAGACTGTGTTCCCTGCTGCCAAAGGGAATATTAGTTCTGTGCCTTGGTGGGATGAGCTATCTGAATGTGGGAAAAAGGGACTTTCTGTTAAACCCAAGATGGGGGATGCGTTGCTTTTCTGGAGCATGAGGCCTGATGCGTCGCTAGATCCTTCAAGTTTGCATGGCGGATGCCCTGTGATTAAGGGAAATAAATGGTCATCTACTAAATGGGTGCGTGTCAATGAGTACAAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004656 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006082 GO:0006464 GO:0006520 GO:0006575 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016491 GO:0016705 GO:0016706 GO:0018126 GO:0018193 GO:0018208 GO:0018401 GO:0019471 GO:0019511 GO:0019538 GO:0019752 GO:0019798 GO:0021700 GO:0022622 GO:0030154 GO:0031543 GO:0031545 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0051213 GO:0055114 GO:0071695 GO:0071704 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:0140096 GO:1901564 GO:1901605 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 map00330 map01100

Pfam Domains

Protein Families

2OG-FeII_Oxy_3

Protein Analysis

292

Amino Acids

32.58

Weight (kDa)

8.31

Isoelectric Point (pI)

50.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010755)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17720 AT4G35810 AT4G35810 AT5G66060 AT5G66060
fragaria_vesca	FvH4_1g11100
malus_domestica	MD02G1123600.v1.1 MD15G1237500.v1.1
prunus_persica	Prupe.7G174900_v2.0.a1
pyrus_communis	pycom02g09640
rosa_chinensis	RchiOBHm_Chr2g0098371
rosa_laevigata	RLG00000016795
rosa_multiflora	Rmu_sc0023758.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144030
rosa_rugosa	Rorug02G0072600 Rorug02G0072700
rosa_samantha	Rh2AG119700 Rh2BG122800 Rh2CG124400
rosa_wichuraiana	Rw2G009380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	141
AccII	CGCG	3 cut(s)	23, 25, 426
AciI	CCGC	4 cut(s)	5, 141, 391, 804
AclWI	GGATC	2 cut(s)	94, 779
AcoI	YGGCCR	1 cut(s)	159
AcsI	RAATTY	1 cut(s)	870
AcuI	CTGAAG	1 cut(s)	14
AfaI	GTAC	3 cut(s)	189, 611, 866
AfiI	CCNNNNNNNGG	2 cut(s)	737, 738
AgsI	TTSAA	5 cut(s)	503, 557, 568, 626, 792
AleI	CACNNNNGTG	1 cut(s)	95
AloI	GAACNNNNNNTCC	4 cut(s)	489, 521, 655, 687
AluBI	AGCT	3 cut(s)	180, 399, 694
AluI	AGCT	3 cut(s)	180, 399, 694
Alw26I	GTCTC	1 cut(s)	632
AlwI	GGATC	2 cut(s)	94, 779
Ama87I	CYCGRG	1 cut(s)	136
AoxI	GGCC	2 cut(s)	159, 767
ApeKI	GCWGC	1 cut(s)	653
ApoI	RAATTY	1 cut(s)	870
AspLEI	GCGC	4 cut(s)	25, 27, 200, 426
AspS9I	GGNCC	3 cut(s)	67, 133, 388
AsuHPI	GGTGA	2 cut(s)	460, 647
AvaI	CYCGRG	1 cut(s)	136
AvaII	GGWCC	3 cut(s)	67, 133, 388
BbsI	GAAGAC	1 cut(s)	42
BbvI	GCAGC	1 cut(s)	640
BccI	CCATC	1 cut(s)	730
BcoDI	GTCTC	1 cut(s)	632
BfaI	CTAG	3 cut(s)	330, 573, 782
BfmI	CTRYAG	1 cut(s)	480
BfoI	RGCGCY	1 cut(s)	201
BisI	GCNGC	2 cut(s)	142, 654
BlsI	GCNGC	2 cut(s)	143, 655
Bme18I	GGWCC	3 cut(s)	67, 133, 388
BmeT110I	CYCGRG	1 cut(s)	136
BmgT120I	GGNCC	3 cut(s)	67, 133, 388
BmiI	GGNNCC	4 cut(s)	135, 145, 258, 389
BmsI	GCATC	3 cut(s)	733, 763, 797
BpiI	GAAGAC	1 cut(s)	42
BpmI	CTGGAG	1 cut(s)	778
Bsa29I	ATCGAT	1 cut(s)	315
BsaJI	CCNNGG	6 cut(s)	14, 118, 162, 291, 597, 680
Bsc4I	CCNNNNNNNGG	2 cut(s)	737, 738
Bse1I	ACTGG	1 cut(s)	370
BseCI	ATCGAT	1 cut(s)	315
BseDI	CCNNGG	6 cut(s)	14, 118, 162, 291, 597, 680
BseGI	GGATG	3 cut(s)	694, 748, 812
BseLI	CCNNNNNNNGG	2 cut(s)	737, 738
BseMII	CTCAG	2 cut(s)	190, 630
BseNI	ACTGG	1 cut(s)	370
BsePI	GCGCGC	1 cut(s)	23
BseRI	GAGGAG	1 cut(s)	136
BseXI	GCAGC	1 cut(s)	640
Bsh1236I	CGCG	3 cut(s)	23, 25, 426
BshFI	GGCC	2 cut(s)	161, 769
BshVI	ATCGAT	1 cut(s)	315
BsiHKCI	CYCGRG	1 cut(s)	136
BslFI	GGGAC	3 cut(s)	119, 510, 729
BslI	CCNNNNNNNGG	2 cut(s)	737, 738
BsmAI	GTCTC	1 cut(s)	632
BsmFI	GGGAC	3 cut(s)	119, 510, 729
BsnI	GGCC	2 cut(s)	161, 769
BsoBI	CYCGRG	1 cut(s)	136
Bsp143I	GATC	4 cut(s)	99, 172, 316, 784
BspACI	CCGC	4 cut(s)	5, 141, 391, 804
BspANI	GGCC	2 cut(s)	161, 769
BspCNI	CTCAG	2 cut(s)	189, 629
BspDI	ATCGAT	1 cut(s)	315
BspFNI	CGCG	3 cut(s)	23, 25, 426
BspLI	GGNNCC	4 cut(s)	135, 145, 258, 389
BspPI	GGATC	2 cut(s)	94, 779
BspQI	GCTCTTC	1 cut(s)	188
BsrBI	CCGCTC	1 cut(s)	141
BsrI	ACTGG	1 cut(s)	370
BssECI	CCNNGG	6 cut(s)	14, 118, 162, 291, 597, 680
BssHII	GCGCGC	1 cut(s)	23
BssMI	GATC	4 cut(s)	99, 172, 316, 784
BssT1I	CCWWGG	5 cut(s)	14, 118, 162, 291, 680
Bst4CI	ACNGT	3 cut(s)	349, 601, 643
Bst6I	CTCTTC	2 cut(s)	188, 446
BstC8I	GCNNGC	2 cut(s)	21, 25
BstDEI	CTNAG	2 cut(s)	176, 616
BstDSI	CCRYGG	1 cut(s)	597
BstF5I	GGATG	3 cut(s)	694, 748, 812
BstFNI	CGCG	3 cut(s)	23, 25, 426
BstH2I	RGCGCY	1 cut(s)	201
BstHHI	GCGC	4 cut(s)	25, 27, 200, 426
BstKTI	GATC	4 cut(s)	102, 175, 319, 787
BstMAI	GTCTC	1 cut(s)	632
BstMBI	GATC	4 cut(s)	99, 172, 316, 784
BstMWI	GCNNNNNNNGC	4 cut(s)	150, 381, 390, 421
BstSFI	CTRYAG	1 cut(s)	480
BstUI	CGCG	3 cut(s)	23, 25, 426
BstV1I	GCAGC	1 cut(s)	640
BstV2I	GAAGAC	1 cut(s)	42
BstX2I	RGATCY	1 cut(s)	784
BstYI	RGATCY	1 cut(s)	784
Bsu15I	ATCGAT	1 cut(s)	315
BsuRI	GGCC	2 cut(s)	161, 769
BsuTUI	ATCGAT	1 cut(s)	315
BtgI	CCRYGG	1 cut(s)	597
BtsCI	GGATG	3 cut(s)	694, 748, 812
BtsI	GCAGTG	1 cut(s)	239
BtsIMutI	CAGTG	1 cut(s)	239
Cac8I	GCNNGC	2 cut(s)	21, 25
CfoI	GCGC	4 cut(s)	25, 27, 200, 426
Cfr13I	GGNCC	3 cut(s)	67, 133, 388
ClaI	ATCGAT	1 cut(s)	315
CseI	GACGC	1 cut(s)	765
Csp6I	GTAC	3 cut(s)	188, 610, 865
CviAII	CATG	5 cut(s)	85, 252, 607, 763, 800
CviQI	GTAC	3 cut(s)	188, 610, 865
DdeI	CTNAG	2 cut(s)	176, 616
DpnI	GATC	4 cut(s)	101, 174, 318, 786
DpnII	GATC	4 cut(s)	99, 172, 316, 784
EaeI	YGGCCR	1 cut(s)	159
Eam1104I	CTCTTC	2 cut(s)	188, 446
EarI	CTCTTC	2 cut(s)	188, 446
EciI	GGCGGA	1 cut(s)	819
Eco130I	CCWWGG	5 cut(s)	14, 118, 162, 291, 680
Eco147I	AGGCCT	1 cut(s)	769
Eco47I	GGWCC	3 cut(s)	67, 133, 388
Eco57I	CTGAAG	1 cut(s)	14
Eco88I	CYCGRG	1 cut(s)	136
EcoT14I	CCWWGG	5 cut(s)	14, 118, 162, 291, 680
ErhI	CCWWGG	5 cut(s)	14, 118, 162, 291, 680
FaeI	CATG	5 cut(s)	88, 255, 610, 766, 803
FaqI	GGGAC	3 cut(s)	119, 510, 729
FatI	CATG	5 cut(s)	84, 251, 606, 762, 799
Fnu4HI	GCNGC	2 cut(s)	142, 654
FokI	GGATG	3 cut(s)	701, 755, 819
Fsp4HI	GCNGC	2 cut(s)	142, 654
FspBI	CTAG	3 cut(s)	330, 573, 782
GlaI	GCGC	4 cut(s)	24, 26, 199, 425
GluI	GCNGC	2 cut(s)	142, 654
GsuI	CTGGAG	1 cut(s)	778
HaeII	RGCGCY	1 cut(s)	201
HaeIII	GGCC	2 cut(s)	161, 769
HgaI	GACGC	1 cut(s)	765
HhaI	GCGC	4 cut(s)	25, 27, 200, 426
Hin1II	CATG	5 cut(s)	88, 255, 610, 766, 803
Hin6I	GCGC	4 cut(s)	23, 25, 198, 424
HinP1I	GCGC	4 cut(s)	23, 25, 198, 424
HincII	GTYRAC	2 cut(s)	345, 587
HindII	GTYRAC	2 cut(s)	345, 587
HinfI	GANTC	1 cut(s)	34
HphI	GGTGA	2 cut(s)	460, 647
Hpy166II	GTNNAC	3 cut(s)	90, 345, 587
Hpy188I	TCNGA	3 cut(s)	33, 619, 700
Hpy188III	TCNNGA	7 cut(s)	97, 136, 286, 402, 439, 557, 757
Hpy8I	GTNNAC	3 cut(s)	90, 345, 587
Hpy99I	CGWCG	1 cut(s)	781
HpyAV	CCTTC	4 cut(s)	38, 212, 623, 798
HpyCH4III	ACNGT	3 cut(s)	349, 601, 643
HpyCH4IV	ACGT	1 cut(s)	589
HpyCH4V	TGCA	3 cut(s)	337, 415, 799
HpyF10VI	GCNNNNNNNGC	4 cut(s)	150, 381, 390, 421
HpyF3I	CTNAG	2 cut(s)	176, 616
HpySE526I	ACGT	1 cut(s)	589
Hsp92II	CATG	5 cut(s)	88, 255, 610, 766, 803
HspAI	GCGC	4 cut(s)	23, 25, 198, 424
Kzo9I	GATC	4 cut(s)	99, 172, 316, 784
LguI	GCTCTTC	1 cut(s)	188
LmnI	GCTCC	4 cut(s)	149, 229, 256, 759
Lsp1109I	GCAGC	1 cut(s)	640
LweI	GCATC	3 cut(s)	733, 763, 797
MaeI	CTAG	3 cut(s)	330, 573, 782
MaeII	ACGT	1 cut(s)	589
MalI	GATC	4 cut(s)	101, 174, 318, 786
MbiI	CCGCTC	1 cut(s)	141
MboI	GATC	4 cut(s)	99, 172, 316, 784
MboII	GAAGA	8 cut(s)	42, 45, 101, 205, 224, 227, 463, 638
MflI	RGATCY	1 cut(s)	784
MluCI	AATT	5 cut(s)	280, 432, 456, 463, 870
MlyI	GAGTC	1 cut(s)	28
MmeI	TCCRAC	1 cut(s)	502
MseI	TTAA	4 cut(s)	9, 726, 819, 874
MslI	CAYNNNNRTG	1 cut(s)	95
MvnI	CGCG	3 cut(s)	23, 25, 426
MwoI	GCNNNNNNNGC	4 cut(s)	150, 381, 390, 421
NdeII	GATC	4 cut(s)	99, 172, 316, 784
NlaIII	CATG	5 cut(s)	88, 255, 610, 766, 803
NlaIV	GGNNCC	4 cut(s)	135, 145, 258, 389
NmeAIII	GCCGAG	2 cut(s)	137, 285
OliI	CACNNNNGTG	1 cut(s)	95
PauI	GCGCGC	1 cut(s)	23
PceI	AGGCCT	1 cut(s)	769
PciSI	GCTCTTC	1 cut(s)	188
PkrI	GCNGC	2 cut(s)	143, 655
PleI	GAGTC	1 cut(s)	28
PpsI	GAGTC	1 cut(s)	28
PspN4I	GGNNCC	4 cut(s)	135, 145, 258, 389
PspPI	GGNCC	3 cut(s)	67, 133, 388
PsuI	RGATCY	1 cut(s)	784
PteI	GCGCGC	1 cut(s)	23
RsaI	GTAC	3 cut(s)	189, 611, 866
RsaNI	GTAC	3 cut(s)	188, 610, 865
RseI	CAYNNNNRTG	1 cut(s)	95
SapI	GCTCTTC	1 cut(s)	188
SaqAI	TTAA	4 cut(s)	9, 726, 819, 874
SatI	GCNGC	2 cut(s)	142, 654
Sau3AI	GATC	4 cut(s)	99, 172, 316, 784
Sau96I	GGNCC	3 cut(s)	67, 133, 388
SchI	GAGTC	1 cut(s)	28
SetI	ASST	9 cut(s)	182, 331, 401, 473, 481, 586, 592, 615, 696
SfaNI	GCATC	3 cut(s)	733, 763, 797
SfcI	CTRYAG	1 cut(s)	480
SinI	GGWCC	3 cut(s)	67, 133, 388
SmiMI	CAYNNNNRTG	1 cut(s)	95
Sse9I	AATT	5 cut(s)	280, 432, 456, 463, 870
SseBI	AGGCCT	1 cut(s)	769
SsiI	CCGC	4 cut(s)	5, 141, 391, 804
SspI	AATATT	1 cut(s)	667
SspMI	CTAG	3 cut(s)	330, 573, 782
StuI	AGGCCT	1 cut(s)	769
StyI	CCWWGG	5 cut(s)	14, 118, 162, 291, 680
TaaI	ACNGT	3 cut(s)	349, 601, 643
TaiI	ACGT	1 cut(s)	592
TaqI	TCGA	3 cut(s)	182, 240, 315
TaqII	GACCGA	1 cut(s)	121
TasI	AATT	5 cut(s)	280, 432, 456, 463, 870
TatI	WGTACW	1 cut(s)	864
TauI	GCSGC	1 cut(s)	144
Tru1I	TTAA	4 cut(s)	9, 726, 819, 874
Tru9I	TTAA	4 cut(s)	9, 726, 819, 874
TscAI	CASTG	1 cut(s)	239
TseI	GCWGC	1 cut(s)	653
TspDTI	ATGAA	2 cut(s)	225, 531
TspGWI	ACGGA	1 cut(s)	205
TspRI	CASTG	1 cut(s)	239
VpaK11BI	GGWCC	3 cut(s)	67, 133, 388
XapI	RAATTY	1 cut(s)	870
XcmI	CCANNNNNNNNNTGG	1 cut(s)	518
XspI	CTAG	3 cut(s)	330, 573, 782

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.