prolyl 4-hydroxylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G17720 AT4G35810 AT4G35810 AT5G66060 AT5G66060 |
| fragaria_vesca | FvH4_1g11100 |
| malus_domestica | MD02G1123600.v1.1 MD15G1237500.v1.1 |
| prunus_persica | Prupe.7G174900_v2.0.a1 |
| pyrus_communis | pycom02g09640 |
| rosa_chinensis | RchiOBHm_Chr2g0098371 |
| rosa_laevigata | RLG00000016795 |
| rosa_multiflora | Rmu_sc0023758.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00144030 |
| rosa_rugosa | Rorug02G0072600 Rorug02G0072700 |
| rosa_samantha | Rh2AG119700 Rh2BG122800 Rh2CG124400 |
| rosa_wichuraiana | Rw2G009380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 316 |
| AcuI | CTGAAG | 1 cut(s) | 371 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 106 |
| AgsI | TTSAA | 2 cut(s) | 202, 406 |
| AluBI | AGCT | 5 cut(s) | 82, 245, 349, 356, 433 |
| AluI | AGCT | 5 cut(s) | 82, 245, 349, 356, 433 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 61 |
| BbsI | GAAGAC | 1 cut(s) | 154 |
| BccI | CCATC | 1 cut(s) | 329 |
| BlpI | GCTNAGC | 1 cut(s) | 278 |
| BmsI | GCATC | 2 cut(s) | 63, 139 |
| BpiI | GAAGAC | 1 cut(s) | 154 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 278 |
| BpuEI | CTTGAG | 1 cut(s) | 173 |
| BsaJI | CCNNGG | 1 cut(s) | 375 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 106 |
| Bse1I | ACTGG | 1 cut(s) | 124 |
| BseDI | CCNNGG | 1 cut(s) | 375 |
| BseGI | GGATG | 1 cut(s) | 395 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseMII | CTCAG | 1 cut(s) | 405 |
| BseNI | ACTGG | 1 cut(s) | 124 |
| BseRI | GAGGAG | 1 cut(s) | 67 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 106 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 278 |
| BspACI | CCGC | 1 cut(s) | 316 |
| BspCNI | CTCAG | 1 cut(s) | 406 |
| BsrI | ACTGG | 1 cut(s) | 124 |
| BssECI | CCNNGG | 1 cut(s) | 375 |
| BssT1I | CCWWGG | 1 cut(s) | 375 |
| Bst6I | CTCTTC | 1 cut(s) | 263 |
| BstC8I | GCNNGC | 1 cut(s) | 235 |
| BstDEI | CTNAG | 2 cut(s) | 278, 414 |
| BstF5I | GGATG | 1 cut(s) | 395 |
| BstV2I | GAAGAC | 1 cut(s) | 154 |
| BtsCI | GGATG | 1 cut(s) | 395 |
| BtsI | GCAGTG | 1 cut(s) | 192 |
| BtsIMutI | CAGTG | 2 cut(s) | 192, 293 |
| Cac8I | GCNNGC | 1 cut(s) | 235 |
| CseI | GACGC | 1 cut(s) | 271 |
| CviAII | CATG | 1 cut(s) | 221 |
| CviJI | RGCY | 8 cut(s) | 82, 99, 245, 277, 306, 349, 356, 433 |
| CviKI_1 | RGCY | 8 cut(s) | 82, 99, 245, 277, 306, 349, 356, 433 |
| DdeI | CTNAG | 2 cut(s) | 278, 414 |
| Eam1104I | CTCTTC | 1 cut(s) | 263 |
| EarI | CTCTTC | 1 cut(s) | 263 |
| Eco130I | CCWWGG | 1 cut(s) | 375 |
| Eco57I | CTGAAG | 1 cut(s) | 371 |
| EcoT14I | CCWWGG | 1 cut(s) | 375 |
| ErhI | CCWWGG | 1 cut(s) | 375 |
| FaeI | CATG | 1 cut(s) | 224 |
| FaiI | YATR | 9 cut(s) | 38, 106, 144, 222, 255, 266, 451, 453, 461 |
| FatI | CATG | 1 cut(s) | 220 |
| FauNDI | CATATG | 1 cut(s) | 451 |
| FokI | GGATG | 1 cut(s) | 382 |
| HgaI | GACGC | 1 cut(s) | 271 |
| Hin1II | CATG | 1 cut(s) | 224 |
| HinfI | GANTC | 1 cut(s) | 194 |
| Hpy188I | TCNGA | 1 cut(s) | 415 |
| Hpy188III | TCNNGA | 2 cut(s) | 171, 474 |
| Hpy99I | CGWCG | 1 cut(s) | 287 |
| HpyAV | CCTTC | 2 cut(s) | 117, 267 |
| HpyCH4V | TGCA | 3 cut(s) | 76, 233, 455 |
| HpyF3I | CTNAG | 2 cut(s) | 278, 414 |
| Hsp92II | CATG | 1 cut(s) | 224 |
| LmnI | GCTCC | 1 cut(s) | 127 |
| LpnPI | CCDG | 7 cut(s) | 105, 128, 156, 219, 231, 374, 443 |
| LweI | GCATC | 2 cut(s) | 63, 139 |
| MboII | GAAGA | 4 cut(s) | 159, 203, 280, 377 |
| MluCI | AATT | 1 cut(s) | 288 |
| MmeI | TCCRAC | 2 cut(s) | 35, 308 |
| MnlI | CCTC | 3 cut(s) | 45, 170, 254 |
| MroXI | GAANNNNTTC | 1 cut(s) | 61 |
| MseI | TTAA | 2 cut(s) | 92, 176 |
| MspA1I | CMGCKG | 2 cut(s) | 316, 433 |
| NdeI | CATATG | 1 cut(s) | 451 |
| NlaIII | CATG | 1 cut(s) | 224 |
| PdmI | GAANNNNTTC | 1 cut(s) | 61 |
| PfeI | GAWTC | 1 cut(s) | 194 |
| PvuII | CAGCTG | 1 cut(s) | 433 |
| SaqAI | TTAA | 2 cut(s) | 92, 176 |
| SetI | ASST | 9 cut(s) | 84, 162, 169, 247, 265, 351, 358, 393, 435 |
| SfaNI | GCATC | 2 cut(s) | 63, 139 |
| SmlI | CTYRAG | 1 cut(s) | 152 |
| SmoI | CTYRAG | 1 cut(s) | 152 |
| Sse9I | AATT | 1 cut(s) | 288 |
| SsiI | CCGC | 1 cut(s) | 316 |
| StyI | CCWWGG | 1 cut(s) | 375 |
| TaqII | GACCGA | 1 cut(s) | 399 |
| TasI | AATT | 1 cut(s) | 288 |
| TfiI | GAWTC | 1 cut(s) | 194 |
| Tru1I | TTAA | 2 cut(s) | 92, 176 |
| Tru9I | TTAA | 2 cut(s) | 92, 176 |
| TscAI | CASTG | 2 cut(s) | 192, 300 |
| TspDTI | ATGAA | 5 cut(s) | 17, 25, 39, 209, 281 |
| TspRI | CASTG | 2 cut(s) | 192, 300 |
| XmnI | GAANNNNTTC | 1 cut(s) | 61 |