Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007422

Physical Location & Seq

Genomic Coordinates Forward (+)

18581023 .. 18584572

Gene Structure 3550 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G197000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 705 bp

ATGGCAGCTCCCTCTGGTAGTTCTGCATCAGTGCCTTCACTGCCACCACCGTGCCCAAAGTCGCCTCCACAGTATCCAGATTTGTATGGGAAGCGCAGAGAAACAGCCAGGGTTCAGATGCTTGAGAGGGAGATTGGTTTTCTTGAGGAGGAACTTAAATCTGTTGAACGCCTTCAACCTTCTTCAAGATGCTGCAAAGAGGTTGCTGATTTTGTGGCTGCAAACCCAGATCCATTAATACCTACGAACCGAAAGAAACGCCGGTCATGTCGCTTCTGGAAATGGCTTTGCCGAATGCCCTGTTTTAGCTGTTCATGGATTTGCTGTTGCTGCTGCAATCGGTGCTCTCTTCACCTAGAAATGCCACGCTGCTGTGACTGCGGTCAGTGTAACTGTAATCCGTGTGCCTGCTGCTGTCCGCTTCCAAAGTGGCGATGTGGCTGCTCATGTCCCCGGTCCTGCTGTTCATGTCCCTGGTCCAGCTGCTCATGTCCCCGGTCCAGCTGCTCATGTCCCTGGTCCAGCTGCTGCAAAAATATTTCCTGCAGCAAAAATTGTTGCATTTTTCCGTCGTGTTCATGTCCTGATTGCTCTTGTAGCAATTGTTTCAAATGGAATTGCTCTTGTCCTAAATGTCCAAAGTTACGGCCTTGCTGCTGTTGTAGAATATCCTGTTGTTGTAACCCCTGCAGTATATGTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0016020 GO:0033993 GO:0042221 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-gamma

Protein Analysis

235

Amino Acids

26.04

Weight (kDa)

8.6

Isoelectric Point (pI)

80.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20635 AT5G20635
fragaria_vesca	FvH4_1g08850 FvH4_1g08850
malus_domestica	MD02G1093600.v1.1 MD15G1218900.v1.1
prunus_persica	Prupe.7G197000_v2.0.a1 Prupe.7G197000_v2.0.a1 Prupe.7G197000_v2.0.a1 Prupe.7G197000_v2.0.a1
pyrus_communis	pycom02g07380 pycom15g19410
rosa_chinensis	RchiOBHm_Chr2g0095321 RchiOBHm_Chr6g0246401 RchiOBHm_Chr6g0246621 RchiOBHm_Chr6g0246681
rosa_laevigata	RLG00000016554
rosa_roxburghii	Rroxscaffold_2G00146480
rosa_rugosa	Rorug02G0049300
rosa_samantha	Rh2AG097700 Rh2BG098900 Rh2CG101000 Rh2DG098600
rosa_wichuraiana	Rw2G007370 Rw6G009870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	381, 419
AclWI	GGATC	1 cut(s)	224
AgsI	TTSAA	4 cut(s)	167, 176, 186, 610
AjnI	CCWGG	3 cut(s)	107, 473, 515
AleI	CACNNNNGTG	1 cut(s)	49
AluBI	AGCT	5 cut(s)	8, 309, 483, 504, 525
AluI	AGCT	5 cut(s)	8, 309, 483, 504, 525
Alw21I	GWGCWC	1 cut(s)	347
AlwI	GGATC	1 cut(s)	224
AlwNI	CAGNNNCTG	1 cut(s)	528
AoxI	GGCC	1 cut(s)	647
AseI	ATTAAT	1 cut(s)	236
Asp700I	GAANNNNTTC	1 cut(s)	171
AspLEI	GCGC	1 cut(s)	96
AspS9I	GGNCC	4 cut(s)	456, 477, 498, 519
AsuC2I	CCSGG	2 cut(s)	454, 496
AsuHPI	GGTGA	1 cut(s)	344
AvaII	GGWCC	4 cut(s)	456, 477, 498, 519
BaeGI	GKGCMC	1 cut(s)	56
Bbv12I	GWGCWC	1 cut(s)	347
BceAI	ACGGC	1 cut(s)	662
BcgI	CGANNNNNNTGC	2 cut(s)	423, 457
BciT130I	CCWGG	3 cut(s)	109, 475, 517
BciVI	GTATCC	1 cut(s)	84
BcnI	CCSGG	2 cut(s)	454, 496
BfaI	CTAG	1 cut(s)	356
BfmI	CTRYAG	2 cut(s)	544, 688
BfuI	GTATCC	1 cut(s)	84
Bme1390I	CCNGG	5 cut(s)	109, 454, 475, 496, 517
Bme18I	GGWCC	4 cut(s)	456, 477, 498, 519
BmgT120I	GGNCC	4 cut(s)	456, 477, 498, 519
BmrFI	CCNGG	5 cut(s)	109, 454, 475, 496, 517
BmsI	GCATC	3 cut(s)	35, 108, 179
BoxI	GACNNNNGTC	1 cut(s)	381
BpuEI	CTTGAG	2 cut(s)	143, 164
BpuMI	CCSGG	2 cut(s)	454, 496
BsaJI	CCNNGG	5 cut(s)	108, 452, 473, 494, 515
Bse118I	RCCGGY	1 cut(s)	261
BseBI	CCWGG	3 cut(s)	109, 475, 517
BseDI	CCNNGG	5 cut(s)	108, 452, 473, 494, 515
BseRI	GAGGAG	1 cut(s)	161
BseSI	GKGCMC	1 cut(s)	56
BshFI	GGCC	1 cut(s)	649
BsiHKAI	GWGCWC	1 cut(s)	347
BsiSI	CCGG	3 cut(s)	262, 454, 496
BslFI	GGGAC	4 cut(s)	435, 456, 477, 498
BsmFI	GGGAC	4 cut(s)	435, 456, 477, 498
BsmI	GAATGC	1 cut(s)	300
BsnI	GGCC	1 cut(s)	649
Bsp1286I	GDGCHC	2 cut(s)	56, 347
Bsp143I	GATC	1 cut(s)	229
BspACI	CCGC	2 cut(s)	381, 419
BspANI	GGCC	1 cut(s)	649
BspMAI	CTGCAG	2 cut(s)	548, 692
BspPI	GGATC	1 cut(s)	224
BsrFI	RCCGGY	1 cut(s)	261
BssAI	RCCGGY	1 cut(s)	261
BssECI	CCNNGG	5 cut(s)	108, 452, 473, 494, 515
BssMI	GATC	1 cut(s)	229
Bst2UI	CCWGG	3 cut(s)	109, 475, 517
Bst4CI	ACNGT	3 cut(s)	51, 72, 395
Bst6I	CTCTTC	1 cut(s)	354
BstAPI	GCANNNNNTGC	1 cut(s)	342
BstC8I	GCNNGC	1 cut(s)	409
BstHHI	GCGC	1 cut(s)	96
BstKTI	GATC	1 cut(s)	232
BstMBI	GATC	1 cut(s)	229
BstMWI	GCNNNNNNNGC	5 cut(s)	40, 330, 342, 378, 597
BstNI	CCWGG	3 cut(s)	109, 475, 517
BstPAI	GACNNNNGTC	1 cut(s)	381
BstSCI	CCNGG	5 cut(s)	107, 452, 473, 494, 515
BstSFI	CTRYAG	2 cut(s)	544, 688
BstSLI	GKGCMC	1 cut(s)	56
BstX2I	RGATCY	1 cut(s)	229
BstYI	RGATCY	1 cut(s)	229
BsuI	GTATCC	1 cut(s)	84
BsuRI	GGCC	1 cut(s)	649
BtgZI	GCGATG	1 cut(s)	448
BtsI	GCAGTG	1 cut(s)	38
BtsIMutI	CAGTG	3 cut(s)	36, 38, 392
Cac8I	GCNNGC	1 cut(s)	409
CaiI	CAGNNNCTG	1 cut(s)	528
CfoI	GCGC	1 cut(s)	96
Cfr10I	RCCGGY	1 cut(s)	261
Cfr13I	GGNCC	4 cut(s)	456, 477, 498, 519
CviAII	CATG	7 cut(s)	267, 315, 447, 468, 489, 510, 579
DpnI	GATC	1 cut(s)	231
DpnII	GATC	1 cut(s)	229
Eam1104I	CTCTTC	1 cut(s)	354
EarI	CTCTTC	1 cut(s)	354
Eco47I	GGWCC	4 cut(s)	456, 477, 498, 519
EcoRII	CCWGG	3 cut(s)	107, 473, 515
FaeI	CATG	7 cut(s)	270, 318, 450, 471, 492, 513, 582
FaqI	GGGAC	4 cut(s)	435, 456, 477, 498
FatI	CATG	7 cut(s)	266, 314, 446, 467, 488, 509, 578
FspBI	CTAG	1 cut(s)	356
GlaI	GCGC	1 cut(s)	95
HaeIII	GGCC	1 cut(s)	649
HapII	CCGG	3 cut(s)	262, 454, 496
HhaI	GCGC	1 cut(s)	96
Hin1II	CATG	7 cut(s)	270, 318, 450, 471, 492, 513, 582
Hin6I	GCGC	1 cut(s)	94
HinP1I	GCGC	1 cut(s)	94
HpaII	CCGG	3 cut(s)	262, 454, 496
HphI	GGTGA	1 cut(s)	344
Hpy188I	TCNGA	1 cut(s)	117
Hpy188III	TCNNGA	5 cut(s)	77, 143, 186, 277, 584
Hpy99I	CGWCG	1 cut(s)	574
HpyAV	CCTTC	3 cut(s)	45, 182, 189
HpyCH4III	ACNGT	3 cut(s)	51, 72, 395
HpyCH4V	TGCA	8 cut(s)	26, 195, 221, 336, 531, 546, 561, 690
HpyF10VI	GCNNNNNNNGC	5 cut(s)	40, 330, 342, 378, 597
Hsp92II	CATG	7 cut(s)	270, 318, 450, 471, 492, 513, 582
HspAI	GCGC	1 cut(s)	94
Kzo9I	GATC	1 cut(s)	229
LmnI	GCTCC	1 cut(s)	13
LweI	GCATC	3 cut(s)	35, 108, 179
MaeI	CTAG	1 cut(s)	356
MaeIII	GTNAC	4 cut(s)	374, 389, 642, 680
MalI	GATC	1 cut(s)	231
MboI	GATC	1 cut(s)	229
MboII	GAAGA	2 cut(s)	174, 341
MfeI	CAATTG	1 cut(s)	601
MflI	RGATCY	1 cut(s)	229
MhlI	GDGCHC	2 cut(s)	56, 347
MluCI	AATT	3 cut(s)	553, 601, 616
MnlI	CCTC	6 cut(s)	22, 75, 120, 139, 142, 193
MroXI	GAANNNNTTC	1 cut(s)	171
MseI	TTAA	2 cut(s)	156, 236
MslI	CAYNNNNRTG	1 cut(s)	49
MspA1I	CMGCKG	3 cut(s)	483, 504, 525
MspI	CCGG	3 cut(s)	262, 454, 496
MspR9I	CCNGG	5 cut(s)	109, 454, 475, 496, 517
MunI	CAATTG	1 cut(s)	601
Mva1269I	GAATGC	1 cut(s)	300
MvaI	CCWGG	3 cut(s)	109, 475, 517
MwoI	GCNNNNNNNGC	5 cut(s)	40, 330, 342, 378, 597
NciI	CCSGG	2 cut(s)	454, 496
NdeII	GATC	1 cut(s)	229
NlaIII	CATG	7 cut(s)	270, 318, 450, 471, 492, 513, 582
NmuCI	GTSAC	1 cut(s)	374
OliI	CACNNNNGTG	1 cut(s)	49
PctI	GAATGC	1 cut(s)	300
PdmI	GAANNNNTTC	1 cut(s)	171
PshAI	GACNNNNGTC	1 cut(s)	381
PshBI	ATTAAT	1 cut(s)	236
Psp6I	CCWGG	3 cut(s)	107, 473, 515
PspGI	CCWGG	3 cut(s)	107, 473, 515
PspPI	GGNCC	4 cut(s)	456, 477, 498, 519
PstI	CTGCAG	2 cut(s)	548, 692
PstNI	CAGNNNCTG	1 cut(s)	528
PsuI	RGATCY	1 cut(s)	229
PvuII	CAGCTG	3 cut(s)	483, 504, 525
RseI	CAYNNNNRTG	1 cut(s)	49
SaqAI	TTAA	2 cut(s)	156, 236
Sau3AI	GATC	1 cut(s)	229
Sau96I	GGNCC	4 cut(s)	456, 477, 498, 519
ScrFI	CCNGG	5 cut(s)	109, 454, 475, 496, 517
SduI	GDGCHC	2 cut(s)	56, 347
SetI	ASST	9 cut(s)	10, 181, 204, 244, 311, 357, 485, 506, 527
SfaNI	GCATC	3 cut(s)	35, 108, 179
SfcI	CTRYAG	2 cut(s)	544, 688
SinI	GGWCC	4 cut(s)	456, 477, 498, 519
SmiMI	CAYNNNNRTG	1 cut(s)	49
SmlI	CTYRAG	2 cut(s)	122, 143
SmoI	CTYRAG	2 cut(s)	122, 143
Sse9I	AATT	3 cut(s)	553, 601, 616
SsiI	CCGC	2 cut(s)	381, 419
SspI	AATATT	1 cut(s)	538
SspMI	CTAG	1 cut(s)	356
StyD4I	CCNGG	5 cut(s)	107, 452, 473, 494, 515
TaaI	ACNGT	3 cut(s)	51, 72, 395
TasI	AATT	3 cut(s)	553, 601, 616
Tru1I	TTAA	2 cut(s)	156, 236
Tru9I	TTAA	2 cut(s)	156, 236
TscAI	CASTG	3 cut(s)	36, 45, 392
TseFI	GTSAC	1 cut(s)	374
Tsp45I	GTSAC	1 cut(s)	374
TspDTI	ATGAA	3 cut(s)	303, 456, 567
TspGWI	ACGGA	2 cut(s)	390, 558
TspRI	CASTG	3 cut(s)	36, 45, 392
VpaK11BI	GGWCC	4 cut(s)	456, 477, 498, 519
VspI	ATTAAT	1 cut(s)	236
XmnI	GAANNNNTTC	1 cut(s)	171
XspI	CTAG	1 cut(s)	356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.