Rw2G007370

Guanine nucleotide-binding protein subunit gamma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0007422
Physical Location & Seq
Reverse (-)
7226690 .. 7229619
2930 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G007370.1

Sequence Viewer

Length: 729 bp
ATGGCAGCTCAGTCTGGTTGTTCTGCTCCGGTTGTGCCTTCTCTGCCGCCGCCAACTCCAAAGTCGCCGCCCCAGTACCCGGATTTGTATGGCAAGCGCAGAGAAACCGCCAGGGTTCAGATGCTTGAGAGGGAAATTGGGTTTCTTGAGGAGGAACTAAAATCTGTTGAACACCTTCAACCTGCTTCCCGATGCTGCAAAGAGATTGCTGATTTTGTGACTGCGAATCCAGATCCGTTAATACCTACAAATCGAAAGAAACGACGATCCTGTCGCTTTTGGAAATGGCTCTGTGGAATGCCCTGTTTTAGCTTGTCATCGATTTGCTGTTGCTGCTGTTGTGATGGGTGCTCTCTTCACCTAGAAATGCCACGCTGCTCCTGCAGCGGTAAATGCTGCGGTTCATGCAGCGGTTCAGGCTGCGGTTCATGCTGCGGTTCATGCAGCGGCCCATGCTGCGGTCCATGTAACTGTAATTCGTGTTTCAGTTGCCCTTCACTACCAAAGTGGCGATGTTGCTGCTCATGTCCCCGATCCCGTTGCTGCAAAACTAGTTCATGTTCATGCAGCAGAAATTGCTGCATTTTACCATCGTGTTTGTGTTCATGTCCCGATTGCTCTTGTTTGAATTGTTTCAAATGGAAATGCTCTTGTCCTAAATGTCCGAAGGTACGGCCTTGTTGCTGTTGTAAAATAACCTGCTGTAATCCTTGCAGTACATGTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0016020 GO:0033993 GO:0042221 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
G-gamma

Protein Analysis

242

Amino Acids

26.19

Weight (kDa)

8.55

Isoelectric Point (pI)

70.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G-gamma PF00631 37 - 107 2.1e-11 GGL domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 270
Acc36I ACCTGC 2 cut(s) 190, 707
AclWI GGATC 3 cut(s) 227, 261, 528
AfaI GTAC 3 cut(s) 77, 672, 718
AfiI CCNNNNNNNGG 2 cut(s) 79, 458
AflIII ACRYGT 1 cut(s) 719
AgsI TTSAA 4 cut(s) 170, 179, 628, 637
AhlI ACTAGT 1 cut(s) 551
AjnI CCWGG 1 cut(s) 110
AluBI AGCT 2 cut(s) 8, 312
AluI AGCT 2 cut(s) 8, 312
Alw21I GWGCWC 1 cut(s) 353
AlwI GGATC 3 cut(s) 227, 261, 528
AoxI GGCC 2 cut(s) 448, 674
Asp700I GAANNNNTTC 2 cut(s) 174, 632
AspLEI GCGC 1 cut(s) 99
AspS9I GGNCC 2 cut(s) 449, 461
AsuC2I CCSGG 1 cut(s) 80
AsuHPI GGTGA 1 cut(s) 350
AvaII GGWCC 1 cut(s) 461
Bbv12I GWGCWC 1 cut(s) 353
BccI CCATC 2 cut(s) 338, 598
BceAI ACGGC 1 cut(s) 689
BcgI CGANNNNNNTGC 4 cut(s) 501, 522, 535, 556
BciT130I CCWGG 1 cut(s) 112
BcnI CCSGG 1 cut(s) 80
BcuI ACTAGT 1 cut(s) 551
BfaI CTAG 2 cut(s) 362, 552
BfmI CTRYAG 1 cut(s) 382
BfuAI ACCTGC 2 cut(s) 190, 707
Bme1390I CCNGG 2 cut(s) 80, 112
Bme18I GGWCC 1 cut(s) 461
BmgT120I GGNCC 2 cut(s) 449, 461
BmrFI CCNGG 2 cut(s) 80, 112
BmrI ACTGGG 1 cut(s) 67
BmsI GCATC 2 cut(s) 111, 182
BmuI ACTGGG 1 cut(s) 67
BpuEI CTTGAG 2 cut(s) 146, 167
BpuMI CCSGG 1 cut(s) 80
Bsa29I ATCGAT 1 cut(s) 320
BsaJI CCNNGG 1 cut(s) 111
BsaWI WCCGGW 1 cut(s) 28
Bsc4I CCNNNNNNNGG 2 cut(s) 79, 458
Bse1I ACTGG 1 cut(s) 73
BseBI CCWGG 1 cut(s) 112
BseCI ATCGAT 1 cut(s) 320
BseDI CCNNGG 1 cut(s) 111
BseLI CCNNNNNNNGG 2 cut(s) 79, 458
BseMII CTCAG 1 cut(s) 23
BseNI ACTGG 1 cut(s) 73
BseRI GAGGAG 1 cut(s) 164
BshFI GGCC 2 cut(s) 450, 676
BshVI ATCGAT 1 cut(s) 320
BsiHKAI GWGCWC 1 cut(s) 353
BsiSI CCGG 2 cut(s) 29, 80
BslFI GGGAC 2 cut(s) 513, 594
BslI CCNNNNNNNGG 2 cut(s) 79, 458
BsmFI GGGAC 2 cut(s) 513, 594
BsmI GAATGC 1 cut(s) 303
BsnI GGCC 2 cut(s) 450, 676
Bsp1286I GDGCHC 1 cut(s) 353
Bsp143I GATC 3 cut(s) 232, 266, 533
BspANI GGCC 2 cut(s) 450, 676
BspCNI CTCAG 1 cut(s) 22
BspDI ATCGAT 1 cut(s) 320
BspMAI CTGCAG 1 cut(s) 386
BspMI ACCTGC 2 cut(s) 190, 707
BspPI GGATC 3 cut(s) 227, 261, 528
BsrI ACTGG 1 cut(s) 73
BssECI CCNNGG 1 cut(s) 111
BssMI GATC 3 cut(s) 232, 266, 533
Bst2UI CCWGG 1 cut(s) 112
Bst4CI ACNGT 1 cut(s) 473
Bst6I CTCTTC 1 cut(s) 360
BstAPI GCANNNNNTGC 1 cut(s) 576
BstC8I GCNNGC 1 cut(s) 95
BstDEI CTNAG 1 cut(s) 9
BstHHI GCGC 1 cut(s) 99
BstKTI GATC 3 cut(s) 235, 269, 536
BstMBI GATC 3 cut(s) 232, 266, 533
BstNI CCWGG 1 cut(s) 112
BstNSI RCATGY 1 cut(s) 723
BstSCI CCNGG 2 cut(s) 78, 110
BstSFI CTRYAG 1 cut(s) 382
BstX2I RGATCY 1 cut(s) 232
BstYI RGATCY 1 cut(s) 232
Bsu15I ATCGAT 1 cut(s) 320
BsuRI GGCC 2 cut(s) 450, 676
BsuTUI ATCGAT 1 cut(s) 320
BtgZI GCGATG 1 cut(s) 526
BveI ACCTGC 2 cut(s) 190, 707
Cac8I GCNNGC 1 cut(s) 95
CfoI GCGC 1 cut(s) 99
Cfr13I GGNCC 2 cut(s) 449, 461
ClaI ATCGAT 1 cut(s) 320
Csp6I GTAC 3 cut(s) 76, 671, 717
CviJI RGCY 6 cut(s) 8, 289, 312, 420, 450, 676
CviKI_1 RGCY 6 cut(s) 8, 289, 312, 420, 450, 676
CviQI GTAC 3 cut(s) 76, 671, 717
DdeI CTNAG 1 cut(s) 9
DpnI GATC 3 cut(s) 234, 268, 535
DpnII GATC 3 cut(s) 232, 266, 533
DrdI GACNNNNNNGTC 1 cut(s) 270
DseDI GACNNNNNNGTC 1 cut(s) 270
Eam1104I CTCTTC 1 cut(s) 360
EarI CTCTTC 1 cut(s) 360
Eco47I GGWCC 1 cut(s) 461
EcoRII CCWGG 1 cut(s) 110
FaqI GGGAC 2 cut(s) 513, 594
FspBI CTAG 2 cut(s) 362, 552
GlaI GCGC 1 cut(s) 98
HaeIII GGCC 2 cut(s) 450, 676
HapII CCGG 2 cut(s) 29, 80
HhaI GCGC 1 cut(s) 99
Hin6I GCGC 1 cut(s) 97
HinP1I GCGC 1 cut(s) 97
HinfI GANTC 1 cut(s) 226
HpaII CCGG 2 cut(s) 29, 80
HphI GGTGA 1 cut(s) 350
Hpy188I TCNGA 2 cut(s) 120, 666
Hpy188III TCNNGA 4 cut(s) 146, 189, 230, 611
Hpy99I CGWCG 1 cut(s) 267
HpyAV CCTTC 4 cut(s) 48, 185, 504, 661
HpyCH4III ACNGT 1 cut(s) 473
HpyCH4V TGCA 8 cut(s) 198, 384, 408, 444, 546, 567, 582, 714
HpyF3I CTNAG 1 cut(s) 9
HspAI GCGC 1 cut(s) 97
Kzo9I GATC 3 cut(s) 232, 266, 533
LmnI GCTCC 2 cut(s) 31, 383
LweI GCATC 2 cut(s) 111, 182
MaeI CTAG 2 cut(s) 362, 552
MaeIII GTNAC 2 cut(s) 217, 467
MalI GATC 3 cut(s) 234, 268, 535
MboI GATC 3 cut(s) 232, 266, 533
MboII GAAGA 1 cut(s) 347
MflI RGATCY 1 cut(s) 232
MhlI GDGCHC 1 cut(s) 353
MluCI AATT 4 cut(s) 135, 475, 574, 628
MnlI CCTC 3 cut(s) 123, 142, 145
MroXI GAANNNNTTC 2 cut(s) 174, 632
MseI TTAA 1 cut(s) 239
MslI CAYNNNNRTG 1 cut(s) 562
MspA1I CMGCKG 3 cut(s) 387, 411, 447
MspI CCGG 2 cut(s) 29, 80
MspR9I CCNGG 2 cut(s) 80, 112
Mva1269I GAATGC 1 cut(s) 303
MvaI CCWGG 1 cut(s) 112
NciI CCSGG 1 cut(s) 80
NdeII GATC 3 cut(s) 232, 266, 533
NmuCI GTSAC 1 cut(s) 217
NspI RCATGY 1 cut(s) 723
PciI ACATGT 1 cut(s) 719
PcsI WCGNNNNNNNCGW 1 cut(s) 259
PctI GAATGC 1 cut(s) 303
PdmI GAANNNNTTC 2 cut(s) 174, 632
PfeI GAWTC 1 cut(s) 226
PscI ACATGT 1 cut(s) 719
Psp6I CCWGG 1 cut(s) 110
PspGI CCWGG 1 cut(s) 110
PspPI GGNCC 2 cut(s) 449, 461
PstI CTGCAG 1 cut(s) 386
PsuI RGATCY 1 cut(s) 232
RsaI GTAC 3 cut(s) 77, 672, 718
RsaNI GTAC 3 cut(s) 76, 671, 717
RseI CAYNNNNRTG 1 cut(s) 562
SaqAI TTAA 1 cut(s) 239
Sau3AI GATC 3 cut(s) 232, 266, 533
Sau96I GGNCC 2 cut(s) 449, 461
ScrFI CCNGG 2 cut(s) 80, 112
SduI GDGCHC 1 cut(s) 353
SetI ASST 8 cut(s) 10, 177, 184, 247, 314, 363, 672, 701
SfaNI GCATC 2 cut(s) 111, 182
SfcI CTRYAG 1 cut(s) 382
SinI GGWCC 1 cut(s) 461
SmiMI CAYNNNNRTG 1 cut(s) 562
SmlI CTYRAG 2 cut(s) 125, 146
SmoI CTYRAG 2 cut(s) 125, 146
SpeI ACTAGT 1 cut(s) 551
Sse9I AATT 4 cut(s) 135, 475, 574, 628
SspMI CTAG 2 cut(s) 362, 552
StyD4I CCNGG 2 cut(s) 78, 110
TaaI ACNGT 1 cut(s) 473
TaqI TCGA 2 cut(s) 253, 320
TasI AATT 4 cut(s) 135, 475, 574, 628
TatI WGTACW 1 cut(s) 716
TauI GCSGC 4 cut(s) 49, 52, 70, 450
TfiI GAWTC 1 cut(s) 226
Tru1I TTAA 1 cut(s) 239
Tru9I TTAA 1 cut(s) 239
TseFI GTSAC 1 cut(s) 217
Tsp45I GTSAC 1 cut(s) 217
TspDTI ATGAA 6 cut(s) 393, 417, 429, 546, 552, 594
TspGWI ACGGA 1 cut(s) 225
VpaK11BI GGWCC 1 cut(s) 461
XceI RCATGY 1 cut(s) 723
XmnI GAANNNNTTC 2 cut(s) 174, 632
XspI CTAG 2 cut(s) 362, 552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.