RchiOBHm_Chr6g0246681

Guanine nucleotide-binding protein subunit gamma

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
2359452 .. 2360970
1519 bp
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UTR
Exon/CDS
Intron
PRQ22113

Sequence Viewer

Length: 519 bp
ATGAGGATTGCTGATTTTGTGACTGCGAATCCAGATCCGTTGATACCAACAAATCGAAAGAAACAACAATCCTGTCACTTTTGGAAATGGCTCTGTGGAATGCCCTGTTTTAGCTTGTCATCGATTTGCTGTTGCTGCTGTTGTGATGGGTGCTCTCTTCACCTAGAAATGCCACGCTGCTCCTGCTGTGGTTCATGCAGTGGTTCAGGCTGCGGTTCATGCTGTGTTTTATGCAAGGGTTCATGCTGCAGTCCATGTAACTGTAATTCGTGTTTCAGTTGCCCTTCACTACCAAAGTGGCGATGTTGCTGCTCATGTCCCCGATCCCATTGCTGCAAAACTAGTTCATGTTCATGCAGCAGAAATTGCTGCATTTTACCATTGTGTTCGTGCTCATGTCCCGATTGCTCTTGTTTGAATTGTTTCAAATGGAAATGCTCTTGTCCTAAATGTCTGAAGGTACGGCCTTGTTGCTGTTGTAAAATAACCTACTGTAACCCTTGCAGTACATGTTTGTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

172

Amino Acids

18.66

Weight (kDa)

8.48

Isoelectric Point (pI)

61.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 213
AclWI GGATC 2 cut(s) 29, 318
AcuI CTGAAG 1 cut(s) 476
AfaI GTAC 2 cut(s) 462, 508
AflIII ACRYGT 1 cut(s) 509
AgsI TTSAA 2 cut(s) 418, 427
AhlI ACTAGT 1 cut(s) 341
AluBI AGCT 1 cut(s) 114
AluI AGCT 1 cut(s) 114
Alw21I GWGCWC 2 cut(s) 155, 395
AlwI GGATC 2 cut(s) 29, 318
AoxI GGCC 1 cut(s) 464
ApeKI GCWGC 8 cut(s) 135, 177, 210, 246, 309, 333, 357, 369
Asp700I GAANNNNTTC 1 cut(s) 422
AsuHPI GGTGA 1 cut(s) 152
Bbv12I GWGCWC 2 cut(s) 155, 395
BbvI GCAGC 8 cut(s) 122, 164, 197, 233, 296, 320, 356, 369
BccI CCATC 1 cut(s) 140
BceAI ACGGC 1 cut(s) 479
BcgI CGANNNNNNTGC 4 cut(s) 291, 312, 325, 346
BcuI ACTAGT 1 cut(s) 341
BfaI CTAG 2 cut(s) 164, 342
BfmI CTRYAG 1 cut(s) 247
BisI GCNGC 8 cut(s) 136, 178, 211, 247, 310, 334, 358, 370
BlsI GCNGC 8 cut(s) 137, 179, 212, 248, 311, 335, 359, 371
Bsa29I ATCGAT 1 cut(s) 122
Bse3DI GCAATG 1 cut(s) 328
BseCI ATCGAT 1 cut(s) 122
BseMI GCAATG 1 cut(s) 328
BseXI GCAGC 8 cut(s) 122, 164, 197, 233, 296, 320, 356, 369
BshFI GGCC 1 cut(s) 466
BshVI ATCGAT 1 cut(s) 122
BsiHKAI GWGCWC 2 cut(s) 155, 395
BslFI GGGAC 2 cut(s) 303, 384
BsmFI GGGAC 2 cut(s) 303, 384
BsmI GAATGC 1 cut(s) 105
BsnI GGCC 1 cut(s) 466
Bsp1286I GDGCHC 2 cut(s) 155, 395
Bsp143I GATC 2 cut(s) 34, 323
BspACI CCGC 1 cut(s) 213
BspANI GGCC 1 cut(s) 466
BspDI ATCGAT 1 cut(s) 122
BspMAI CTGCAG 1 cut(s) 251
BspPI GGATC 2 cut(s) 29, 318
BsrDI GCAATG 1 cut(s) 328
BssMI GATC 2 cut(s) 34, 323
Bst4CI ACNGT 2 cut(s) 263, 494
Bst6I CTCTTC 1 cut(s) 162
BstAPI GCANNNNNTGC 1 cut(s) 366
BstKTI GATC 2 cut(s) 37, 326
BstMBI GATC 2 cut(s) 34, 323
BstMWI GCNNNNNNNGC 4 cut(s) 135, 183, 219, 366
BstNSI RCATGY 1 cut(s) 513
BstSFI CTRYAG 1 cut(s) 247
BstV1I GCAGC 8 cut(s) 122, 164, 197, 233, 296, 320, 356, 369
BstX2I RGATCY 1 cut(s) 34
BstYI RGATCY 1 cut(s) 34
Bsu15I ATCGAT 1 cut(s) 122
BsuRI GGCC 1 cut(s) 466
BsuTUI ATCGAT 1 cut(s) 122
BtgZI GCGATG 1 cut(s) 316
BtsI GCAGTG 1 cut(s) 205
BtsIMutI CAGTG 1 cut(s) 205
ClaI ATCGAT 1 cut(s) 122
Csp6I GTAC 2 cut(s) 461, 507
CviAII CATG 9 cut(s) 195, 219, 243, 255, 315, 348, 354, 396, 510
CviJI RGCY 4 cut(s) 91, 114, 210, 466
CviKI_1 RGCY 4 cut(s) 91, 114, 210, 466
CviQI GTAC 2 cut(s) 461, 507
DpnI GATC 2 cut(s) 36, 325
DpnII GATC 2 cut(s) 34, 323
Eam1104I CTCTTC 1 cut(s) 162
EarI CTCTTC 1 cut(s) 162
Eco57I CTGAAG 1 cut(s) 476
FaeI CATG 9 cut(s) 198, 222, 246, 258, 318, 351, 357, 399, 513
FaqI GGGAC 2 cut(s) 303, 384
FatI CATG 9 cut(s) 194, 218, 242, 254, 314, 347, 353, 395, 509
Fnu4HI GCNGC 8 cut(s) 136, 178, 211, 247, 310, 334, 358, 370
Fsp4HI GCNGC 8 cut(s) 136, 178, 211, 247, 310, 334, 358, 370
FspBI CTAG 2 cut(s) 164, 342
GluI GCNGC 8 cut(s) 136, 178, 211, 247, 310, 334, 358, 370
HaeIII GGCC 1 cut(s) 466
Hin1II CATG 9 cut(s) 198, 222, 246, 258, 318, 351, 357, 399, 513
HinfI GANTC 1 cut(s) 28
HphI GGTGA 1 cut(s) 152
Hpy188I TCNGA 1 cut(s) 456
Hpy188III TCNNGA 2 cut(s) 32, 401
HpyAV CCTTC 2 cut(s) 294, 451
HpyCH4III ACNGT 2 cut(s) 263, 494
HpyCH4V TGCA 7 cut(s) 198, 234, 249, 336, 357, 372, 504
HpyF10VI GCNNNNNNNGC 4 cut(s) 135, 183, 219, 366
Hsp92II CATG 9 cut(s) 198, 222, 246, 258, 318, 351, 357, 399, 513
Kzo9I GATC 2 cut(s) 34, 323
LmnI GCTCC 1 cut(s) 185
LpnPI CCDG 5 cut(s) 45, 85, 118, 192, 196
Lsp1109I GCAGC 8 cut(s) 122, 164, 197, 233, 296, 320, 356, 369
MaeI CTAG 2 cut(s) 164, 342
MaeIII GTNAC 4 cut(s) 19, 74, 257, 494
MalI GATC 2 cut(s) 36, 325
MboI GATC 2 cut(s) 34, 323
MboII GAAGA 1 cut(s) 149
MflI RGATCY 1 cut(s) 34
MhlI GDGCHC 2 cut(s) 155, 395
MluCI AATT 3 cut(s) 265, 364, 418
MroXI GAANNNNTTC 1 cut(s) 422
MslI CAYNNNNRTG 1 cut(s) 352
Mva1269I GAATGC 1 cut(s) 105
MwoI GCNNNNNNNGC 4 cut(s) 135, 183, 219, 366
NdeII GATC 2 cut(s) 34, 323
NlaIII CATG 9 cut(s) 198, 222, 246, 258, 318, 351, 357, 399, 513
NmuCI GTSAC 2 cut(s) 19, 74
NspI RCATGY 1 cut(s) 513
PciI ACATGT 1 cut(s) 509
PctI GAATGC 1 cut(s) 105
PdmI GAANNNNTTC 1 cut(s) 422
PfeI GAWTC 1 cut(s) 28
PkrI GCNGC 8 cut(s) 137, 179, 212, 248, 311, 335, 359, 371
PscI ACATGT 1 cut(s) 509
PstI CTGCAG 1 cut(s) 251
PsuI RGATCY 1 cut(s) 34
RsaI GTAC 2 cut(s) 462, 508
RsaNI GTAC 2 cut(s) 461, 507
RseI CAYNNNNRTG 1 cut(s) 352
SatI GCNGC 8 cut(s) 136, 178, 211, 247, 310, 334, 358, 370
Sau3AI GATC 2 cut(s) 34, 323
SduI GDGCHC 2 cut(s) 155, 395
SetI ASST 4 cut(s) 116, 165, 462, 491
SfcI CTRYAG 1 cut(s) 247
SmiMI CAYNNNNRTG 1 cut(s) 352
SpeI ACTAGT 1 cut(s) 341
Sse9I AATT 3 cut(s) 265, 364, 418
SsiI CCGC 1 cut(s) 213
SspMI CTAG 2 cut(s) 164, 342
TaaI ACNGT 2 cut(s) 263, 494
TaqI TCGA 2 cut(s) 55, 122
TasI AATT 3 cut(s) 265, 364, 418
TatI WGTACW 1 cut(s) 506
TfiI GAWTC 1 cut(s) 28
TscAI CASTG 1 cut(s) 205
TseFI GTSAC 2 cut(s) 19, 74
TseI GCWGC 8 cut(s) 135, 177, 210, 246, 309, 333, 357, 369
Tsp45I GTSAC 2 cut(s) 19, 74
TspDTI ATGAA 5 cut(s) 183, 207, 231, 336, 342
TspGWI ACGGA 1 cut(s) 27
TspRI CASTG 1 cut(s) 205
XceI RCATGY 1 cut(s) 513
XmnI GAANNNNTTC 1 cut(s) 422
XspI CTAG 2 cut(s) 164, 342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.