RLG00000016554

Guanine nucleotide-binding protein subunit gamma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0007422
Physical Location & Seq
Reverse (-)
7620886 .. 7623745
2860 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016554

Sequence Viewer

Length: 564 bp
ATGGCAGCTCAGTCTGGTTGTTCTGCTCCGGTTGTGCCTTCTCTGCCGCCGCCAACTCCAAAGTCGCCGCCCCAGTACCCGGATTTGTATGGCAAGCGCAGAGAAACCGCCAGGGTTCAGATGCTTGAGAGGGAAATTGGGTTTCTTGAGGAGGAACTAAAATCTGTTGAACGCCTTCAACCTGCTTCCCGATGCTGCAAAGAGATTGCTGATTTTGTGACTGCGAATCCAGATCCGTTAATACCTACAAATCGAAAGAAACGACGATCCTGTCGCTTTTGGAAATGGCTCTGTGGAATGCCCTGTTTTAGCTTGTCATCGATTTGCTCGGTTCAGGCTGCGGTTCATGCAGCGGTAAATGCTGTGGTTCATGCAGCGGTTCGTGCTGCGGTCCATGCTGCAGGCCATGTAACTGTAATTCGTGTTTCAGTTGCCCTTCACTACCAAAGTGGCGATGTTGCTGCTCATGTCCCCGATCCCGTTGCTGCAAAACTAGTTCATGCAGCAGAAATTGCTGCATTTTACCATCGTGTTCGTGTTCATGTCCCGATTGCTCTTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0016020 GO:0033993 GO:0042221 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
G-gamma

Protein Analysis

188

Amino Acids

20.34

Weight (kDa)

9.34

Isoelectric Point (pI)

57.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G-gamma PF00631 37 - 103 2.1e-12 GGL domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 270
Acc36I ACCTGC 1 cut(s) 190
AciI CCGC 8 cut(s) 47, 50, 68, 108, 341, 353, 377, 389
AclWI GGATC 3 cut(s) 227, 261, 470
AfaI GTAC 1 cut(s) 77
AfiI CCNNNNNNNGG 1 cut(s) 79
AgsI TTSAA 2 cut(s) 170, 179
AhlI ACTAGT 1 cut(s) 493
AjnI CCWGG 1 cut(s) 110
AluBI AGCT 2 cut(s) 8, 312
AluI AGCT 2 cut(s) 8, 312
AlwI GGATC 3 cut(s) 227, 261, 470
AoxI GGCC 1 cut(s) 403
Asp700I GAANNNNTTC 1 cut(s) 174
AspLEI GCGC 1 cut(s) 99
AspS9I GGNCC 1 cut(s) 391
AsuC2I CCSGG 1 cut(s) 80
AvaII GGWCC 1 cut(s) 391
BccI CCATC 1 cut(s) 534
BcgI CGANNNNNNTGC 4 cut(s) 443, 464, 477, 498
BciT130I CCWGG 1 cut(s) 112
BcnI CCSGG 1 cut(s) 80
BcuI ACTAGT 1 cut(s) 493
BfaI CTAG 1 cut(s) 494
BfmI CTRYAG 1 cut(s) 399
BfuAI ACCTGC 1 cut(s) 190
Bme1390I CCNGG 2 cut(s) 80, 112
Bme18I GGWCC 1 cut(s) 391
BmgT120I GGNCC 1 cut(s) 391
BmrFI CCNGG 2 cut(s) 80, 112
BmrI ACTGGG 1 cut(s) 67
BmsI GCATC 2 cut(s) 111, 182
BmuI ACTGGG 1 cut(s) 67
BpuEI CTTGAG 2 cut(s) 146, 167
BpuMI CCSGG 1 cut(s) 80
Bsa29I ATCGAT 1 cut(s) 320
BsaJI CCNNGG 1 cut(s) 111
BsaWI WCCGGW 1 cut(s) 28
Bsc4I CCNNNNNNNGG 1 cut(s) 79
Bse1I ACTGG 1 cut(s) 73
BseBI CCWGG 1 cut(s) 112
BseCI ATCGAT 1 cut(s) 320
BseDI CCNNGG 1 cut(s) 111
BseLI CCNNNNNNNGG 1 cut(s) 79
BseMII CTCAG 1 cut(s) 23
BseNI ACTGG 1 cut(s) 73
BseRI GAGGAG 1 cut(s) 164
BshFI GGCC 1 cut(s) 405
BshVI ATCGAT 1 cut(s) 320
BsiSI CCGG 2 cut(s) 29, 80
BslFI GGGAC 2 cut(s) 455, 530
BslI CCNNNNNNNGG 1 cut(s) 79
BsmFI GGGAC 2 cut(s) 455, 530
BsmI GAATGC 1 cut(s) 303
BsnI GGCC 1 cut(s) 405
Bsp143I GATC 3 cut(s) 232, 266, 475
BspACI CCGC 8 cut(s) 47, 50, 68, 108, 341, 353, 377, 389
BspANI GGCC 1 cut(s) 405
BspCNI CTCAG 1 cut(s) 22
BspDI ATCGAT 1 cut(s) 320
BspMAI CTGCAG 1 cut(s) 403
BspMI ACCTGC 1 cut(s) 190
BspPI GGATC 3 cut(s) 227, 261, 470
BsrI ACTGG 1 cut(s) 73
BssECI CCNNGG 1 cut(s) 111
BssMI GATC 3 cut(s) 232, 266, 475
Bst2UI CCWGG 1 cut(s) 112
Bst4CI ACNGT 1 cut(s) 415
BstAPI GCANNNNNTGC 1 cut(s) 512
BstC8I GCNNGC 2 cut(s) 95, 403
BstDEI CTNAG 1 cut(s) 9
BstHHI GCGC 1 cut(s) 99
BstKTI GATC 3 cut(s) 235, 269, 478
BstMBI GATC 3 cut(s) 232, 266, 475
BstMWI GCNNNNNNNGC 6 cut(s) 43, 347, 359, 383, 395, 512
BstNI CCWGG 1 cut(s) 112
BstSCI CCNGG 2 cut(s) 78, 110
BstSFI CTRYAG 1 cut(s) 399
BstX2I RGATCY 1 cut(s) 232
BstYI RGATCY 1 cut(s) 232
Bsu15I ATCGAT 1 cut(s) 320
BsuRI GGCC 1 cut(s) 405
BsuTUI ATCGAT 1 cut(s) 320
BtgZI GCGATG 1 cut(s) 468
BveI ACCTGC 1 cut(s) 190
Cac8I GCNNGC 2 cut(s) 95, 403
CfoI GCGC 1 cut(s) 99
Cfr13I GGNCC 1 cut(s) 391
ClaI ATCGAT 1 cut(s) 320
Csp6I GTAC 1 cut(s) 76
CviAII CATG 7 cut(s) 347, 371, 395, 407, 467, 500, 542
CviJI RGCY 5 cut(s) 8, 289, 312, 338, 405
CviKI_1 RGCY 5 cut(s) 8, 289, 312, 338, 405
CviQI GTAC 1 cut(s) 76
DdeI CTNAG 1 cut(s) 9
DpnI GATC 3 cut(s) 234, 268, 477
DpnII GATC 3 cut(s) 232, 266, 475
DrdI GACNNNNNNGTC 1 cut(s) 270
DseDI GACNNNNNNGTC 1 cut(s) 270
Eco47I GGWCC 1 cut(s) 391
EcoRII CCWGG 1 cut(s) 110
FaeI CATG 7 cut(s) 350, 374, 398, 410, 470, 503, 545
FaiI YATR 8 cut(s) 90, 348, 372, 396, 408, 468, 501, 543
FaqI GGGAC 2 cut(s) 455, 530
FatI CATG 7 cut(s) 346, 370, 394, 406, 466, 499, 541
FspBI CTAG 1 cut(s) 494
GlaI GCGC 1 cut(s) 98
HaeIII GGCC 1 cut(s) 405
HapII CCGG 2 cut(s) 29, 80
HhaI GCGC 1 cut(s) 99
Hin1II CATG 7 cut(s) 350, 374, 398, 410, 470, 503, 545
Hin6I GCGC 1 cut(s) 97
HinP1I GCGC 1 cut(s) 97
HinfI GANTC 1 cut(s) 226
HpaII CCGG 2 cut(s) 29, 80
Hpy188I TCNGA 1 cut(s) 120
Hpy188III TCNNGA 4 cut(s) 146, 189, 230, 547
Hpy99I CGWCG 1 cut(s) 267
HpyAV CCTTC 3 cut(s) 48, 185, 446
HpyCH4III ACNGT 1 cut(s) 415
HpyCH4V TGCA 7 cut(s) 198, 350, 374, 401, 488, 503, 518
HpyF10VI GCNNNNNNNGC 6 cut(s) 43, 347, 359, 383, 395, 512
HpyF3I CTNAG 1 cut(s) 9
Hsp92II CATG 7 cut(s) 350, 374, 398, 410, 470, 503, 545
HspAI GCGC 1 cut(s) 97
Kzo9I GATC 3 cut(s) 232, 266, 475
LmnI GCTCC 1 cut(s) 31
LweI GCATC 2 cut(s) 111, 182
MaeI CTAG 1 cut(s) 494
MaeIII GTNAC 2 cut(s) 217, 409
MalI GATC 3 cut(s) 234, 268, 477
MboI GATC 3 cut(s) 232, 266, 475
MflI RGATCY 1 cut(s) 232
MluCI AATT 3 cut(s) 135, 417, 510
MnlI CCTC 3 cut(s) 123, 142, 145
MroXI GAANNNNTTC 1 cut(s) 174
MseI TTAA 1 cut(s) 239
MspA1I CMGCKG 2 cut(s) 353, 377
MspI CCGG 2 cut(s) 29, 80
MspR9I CCNGG 2 cut(s) 80, 112
Mva1269I GAATGC 1 cut(s) 303
MvaI CCWGG 1 cut(s) 112
MwoI GCNNNNNNNGC 6 cut(s) 43, 347, 359, 383, 395, 512
NciI CCSGG 1 cut(s) 80
NdeII GATC 3 cut(s) 232, 266, 475
NlaIII CATG 7 cut(s) 350, 374, 398, 410, 470, 503, 545
NmuCI GTSAC 1 cut(s) 217
PcsI WCGNNNNNNNCGW 1 cut(s) 259
PctI GAATGC 1 cut(s) 303
PdmI GAANNNNTTC 1 cut(s) 174
PfeI GAWTC 1 cut(s) 226
Psp6I CCWGG 1 cut(s) 110
PspGI CCWGG 1 cut(s) 110
PspPI GGNCC 1 cut(s) 391
PstI CTGCAG 1 cut(s) 403
PsuI RGATCY 1 cut(s) 232
RsaI GTAC 1 cut(s) 77
RsaNI GTAC 1 cut(s) 76
SaqAI TTAA 1 cut(s) 239
Sau3AI GATC 3 cut(s) 232, 266, 475
Sau96I GGNCC 1 cut(s) 391
ScrFI CCNGG 2 cut(s) 80, 112
SetI ASST 4 cut(s) 10, 184, 247, 314
SfaNI GCATC 2 cut(s) 111, 182
SfcI CTRYAG 1 cut(s) 399
SinI GGWCC 1 cut(s) 391
SmlI CTYRAG 2 cut(s) 125, 146
SmoI CTYRAG 2 cut(s) 125, 146
SpeI ACTAGT 1 cut(s) 493
Sse9I AATT 3 cut(s) 135, 417, 510
SsiI CCGC 8 cut(s) 47, 50, 68, 108, 341, 353, 377, 389
SspMI CTAG 1 cut(s) 494
StyD4I CCNGG 2 cut(s) 78, 110
TaaI ACNGT 1 cut(s) 415
TaqI TCGA 2 cut(s) 253, 320
TasI AATT 3 cut(s) 135, 417, 510
TauI GCSGC 3 cut(s) 49, 52, 70
TfiI GAWTC 1 cut(s) 226
Tru1I TTAA 1 cut(s) 239
Tru9I TTAA 1 cut(s) 239
TseFI GTSAC 1 cut(s) 217
Tsp45I GTSAC 1 cut(s) 217
TspDTI ATGAA 4 cut(s) 335, 359, 488, 530
TspGWI ACGGA 1 cut(s) 225
VpaK11BI GGWCC 1 cut(s) 391
XmnI GAANNNNTTC 1 cut(s) 174
XspI CTAG 1 cut(s) 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.