Tudor-like domain present in plant sequences.
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G20030 AT5G20030 |
| fragaria_vesca | FvH4_1g03900 FvH4_1g03900 |
| malus_domestica | MD02G1037200.v1.1 MD15G1177400.v1.1 |
| prunus_persica | Prupe.7G238100_v2.0.a1 |
| pyrus_communis | pycom02g03050 pycom15g15870 |
| rosa_chinensis | RchiOBHm_Chr2g0089371 |
| rosa_laevigata | RLG00000016021 |
| rosa_multiflora | Rmu_co8276293.1_g000001 Rmu_sc0000197.1_g000025 Rmu_sc0003382.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00152020 |
| rosa_rugosa | Rorug01G0489600 Rorug01G0489700 Rorug01G0489800 Rorug01G0489900 Rorug01G0490000 Rorug01G0490100 Rorug01G0490200 |
| rosa_samantha | Rh2AG045300 Rh2BG043800 Rh2CG045700 Rh2DG045200 |
| rosa_wichuraiana | Rw2G003740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 160 |
| AccB1I | GGYRCC | 2 cut(s) | 131, 160 |
| AciI | CCGC | 2 cut(s) | 147, 992 |
| AclWI | GGATC | 4 cut(s) | 312, 325, 574, 994 |
| AcoI | YGGCCR | 1 cut(s) | 94 |
| AcsI | RAATTY | 2 cut(s) | 329, 344 |
| AcuI | CTGAAG | 3 cut(s) | 39, 539, 918 |
| AfaI | GTAC | 3 cut(s) | 162, 296, 455 |
| AflII | CTTAAG | 1 cut(s) | 793 |
| AgsI | TTSAA | 6 cut(s) | 10, 276, 350, 409, 593, 802 |
| AjnI | CCWGG | 2 cut(s) | 62, 220 |
| AluBI | AGCT | 3 cut(s) | 479, 587, 1141 |
| AluI | AGCT | 3 cut(s) | 479, 587, 1141 |
| Alw26I | GTCTC | 2 cut(s) | 476, 614 |
| AlwI | GGATC | 4 cut(s) | 312, 325, 574, 994 |
| AoxI | GGCC | 3 cut(s) | 94, 144, 179 |
| ApeKI | GCWGC | 1 cut(s) | 21 |
| ApoI | RAATTY | 2 cut(s) | 329, 344 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 454, 486 |
| Asp718I | GGTACC | 1 cut(s) | 160 |
| AspS9I | GGNCC | 1 cut(s) | 1058 |
| AsuHPI | GGTGA | 5 cut(s) | 236, 446, 776, 861, 1099 |
| AvaII | GGWCC | 1 cut(s) | 1058 |
| BamHI | GGATCC | 1 cut(s) | 317 |
| BanI | GGYRCC | 2 cut(s) | 131, 160 |
| BbvI | GCAGC | 1 cut(s) | 33 |
| BccI | CCATC | 1 cut(s) | 113 |
| BceAI | ACGGC | 1 cut(s) | 109 |
| BciT130I | CCWGG | 2 cut(s) | 64, 222 |
| BclI | TGATCA | 2 cut(s) | 139, 910 |
| BcoDI | GTCTC | 2 cut(s) | 476, 614 |
| BfaI | CTAG | 1 cut(s) | 888 |
| BfrI | CTTAAG | 1 cut(s) | 793 |
| BisI | GCNGC | 3 cut(s) | 22, 147, 993 |
| BlsI | GCNGC | 3 cut(s) | 23, 148, 994 |
| BmcAI | AGTACT | 1 cut(s) | 296 |
| Bme1390I | CCNGG | 2 cut(s) | 64, 222 |
| Bme18I | GGWCC | 1 cut(s) | 1058 |
| BmgT120I | GGNCC | 1 cut(s) | 1058 |
| BmiI | GGNNCC | 5 cut(s) | 61, 133, 162, 219, 319 |
| BmrFI | CCNGG | 2 cut(s) | 64, 222 |
| BmsI | GCATC | 3 cut(s) | 39, 796, 913 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 119, 151 |
| BpmI | CTGGAG | 1 cut(s) | 1179 |
| BsaAI | YACGTR | 1 cut(s) | 698 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 488, 518 |
| Bse1I | ACTGG | 1 cut(s) | 201 |
| Bse3DI | GCAATG | 1 cut(s) | 859 |
| BseBI | CCWGG | 2 cut(s) | 64, 222 |
| BseMI | GCAATG | 1 cut(s) | 859 |
| BseMII | CTCAG | 3 cut(s) | 494, 564, 987 |
| BseNI | ACTGG | 1 cut(s) | 201 |
| BseRI | GAGGAG | 3 cut(s) | 180, 496, 864 |
| BseXI | GCAGC | 1 cut(s) | 33 |
| BshFI | GGCC | 3 cut(s) | 96, 146, 181 |
| BshNI | GGYRCC | 2 cut(s) | 131, 160 |
| BsmAI | GTCTC | 2 cut(s) | 476, 614 |
| BsmBI | CGTCTC | 1 cut(s) | 614 |
| BsmI | GAATGC | 1 cut(s) | 1170 |
| BsnI | GGCC | 3 cut(s) | 96, 146, 181 |
| Bsp143I | GATC | 7 cut(s) | 139, 226, 317, 527, 566, 910, 999 |
| BspACI | CCGC | 2 cut(s) | 147, 992 |
| BspANI | GGCC | 3 cut(s) | 96, 146, 181 |
| BspCNI | CTCAG | 3 cut(s) | 493, 565, 988 |
| BspLI | GGNNCC | 5 cut(s) | 61, 133, 162, 219, 319 |
| BspPI | GGATC | 4 cut(s) | 312, 325, 574, 994 |
| BspT107I | GGYRCC | 2 cut(s) | 131, 160 |
| BspTI | CTTAAG | 1 cut(s) | 793 |
| BsrDI | GCAATG | 1 cut(s) | 859 |
| BsrI | ACTGG | 1 cut(s) | 201 |
| BssMI | GATC | 7 cut(s) | 139, 226, 317, 527, 566, 910, 999 |
| Bst2UI | CCWGG | 2 cut(s) | 64, 222 |
| Bst4CI | ACNGT | 4 cut(s) | 109, 366, 724, 1028 |
| Bst6I | CTCTTC | 1 cut(s) | 515 |
| BstAFI | CTTAAG | 1 cut(s) | 793 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1049 |
| BstBAI | YACGTR | 1 cut(s) | 698 |
| BstC8I | GCNNGC | 2 cut(s) | 605, 1020 |
| BstDEI | CTNAG | 5 cut(s) | 480, 573, 996, 1142, 1150 |
| BstEII | GGTNACC | 1 cut(s) | 1087 |
| BstKTI | GATC | 7 cut(s) | 142, 229, 320, 530, 569, 913, 1002 |
| BstMAI | GTCTC | 2 cut(s) | 476, 614 |
| BstMBI | GATC | 7 cut(s) | 139, 226, 317, 527, 566, 910, 999 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 66, 1049 |
| BstNI | CCWGG | 2 cut(s) | 64, 222 |
| BstNSI | RCATGY | 3 cut(s) | 825, 1022, 1052 |
| BstPI | GGTNACC | 1 cut(s) | 1087 |
| BstSCI | CCNGG | 2 cut(s) | 62, 220 |
| BstV1I | GCAGC | 1 cut(s) | 33 |
| BstX2I | RGATCY | 3 cut(s) | 317, 566, 999 |
| BstYI | RGATCY | 3 cut(s) | 317, 566, 999 |
| BsuRI | GGCC | 3 cut(s) | 96, 146, 181 |
| BtsIMutI | CAGTG | 2 cut(s) | 105, 194 |
| Cac8I | GCNNGC | 2 cut(s) | 605, 1020 |
| Cfr13I | GGNCC | 1 cut(s) | 1058 |
| CseI | GACGC | 2 cut(s) | 596, 1041 |
| Csp6I | GTAC | 3 cut(s) | 161, 295, 454 |
| CviAII | CATG | 3 cut(s) | 822, 1019, 1049 |
| CviJI | RGCY | 9 cut(s) | 60, 96, 146, 181, 310, 479, 587, 995, 1141 |
| CviKI_1 | RGCY | 9 cut(s) | 60, 96, 146, 181, 310, 479, 587, 995, 1141 |
| CviQI | GTAC | 3 cut(s) | 161, 295, 454 |
| DdeI | CTNAG | 5 cut(s) | 480, 573, 996, 1142, 1150 |
| DpnI | GATC | 7 cut(s) | 141, 228, 319, 529, 568, 912, 1001 |
| DpnII | GATC | 7 cut(s) | 139, 226, 317, 527, 566, 910, 999 |
| EaeI | YGGCCR | 1 cut(s) | 94 |
| Eam1104I | CTCTTC | 1 cut(s) | 515 |
| EarI | CTCTTC | 1 cut(s) | 515 |
| Eco147I | AGGCCT | 1 cut(s) | 181 |
| Eco47I | GGWCC | 1 cut(s) | 1058 |
| Eco57I | CTGAAG | 3 cut(s) | 39, 539, 918 |
| Eco91I | GGTNACC | 1 cut(s) | 1087 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1058 |
| EcoO65I | GGTNACC | 1 cut(s) | 1087 |
| EcoRII | CCWGG | 2 cut(s) | 62, 220 |
| Esp3I | CGTCTC | 1 cut(s) | 614 |
| FaeI | CATG | 3 cut(s) | 825, 1022, 1052 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 281, 313 |
| FatI | CATG | 3 cut(s) | 821, 1018, 1048 |
| FauNDI | CATATG | 1 cut(s) | 675 |
| FbaI | TGATCA | 2 cut(s) | 139, 910 |
| Fnu4HI | GCNGC | 3 cut(s) | 22, 147, 993 |
| Fsp4HI | GCNGC | 3 cut(s) | 22, 147, 993 |
| FspBI | CTAG | 1 cut(s) | 888 |
| GluI | GCNGC | 3 cut(s) | 22, 147, 993 |
| GsuI | CTGGAG | 1 cut(s) | 1179 |
| HaeIII | GGCC | 3 cut(s) | 96, 146, 181 |
| HgaI | GACGC | 2 cut(s) | 596, 1041 |
| Hin1II | CATG | 3 cut(s) | 825, 1022, 1052 |
| HincII | GTYRAC | 1 cut(s) | 790 |
| HindII | GTYRAC | 1 cut(s) | 790 |
| HinfI | GANTC | 4 cut(s) | 6, 357, 857, 929 |
| HpaI | GTTAAC | 1 cut(s) | 790 |
| HphI | GGTGA | 5 cut(s) | 236, 446, 776, 861, 1099 |
| Hpy166II | GTNNAC | 1 cut(s) | 790 |
| Hpy188III | TCNNGA | 3 cut(s) | 154, 1056, 1158 |
| Hpy8I | GTNNAC | 1 cut(s) | 790 |
| Hpy99I | CGWCG | 1 cut(s) | 236 |
| HpyAV | CCTTC | 4 cut(s) | 63, 744, 950, 980 |
| HpyCH4III | ACNGT | 4 cut(s) | 109, 366, 724, 1028 |
| HpyCH4IV | ACGT | 3 cut(s) | 498, 697, 768 |
| HpyCH4V | TGCA | 6 cut(s) | 173, 636, 679, 977, 1018, 1032 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 66, 1049 |
| HpyF3I | CTNAG | 5 cut(s) | 480, 573, 996, 1142, 1150 |
| HpySE526I | ACGT | 3 cut(s) | 498, 697, 768 |
| Hsp92II | CATG | 3 cut(s) | 825, 1022, 1052 |
| KpnI | GGTACC | 1 cut(s) | 164 |
| Ksp22I | TGATCA | 2 cut(s) | 139, 910 |
| KspAI | GTTAAC | 1 cut(s) | 790 |
| Kzo9I | GATC | 7 cut(s) | 139, 226, 317, 527, 566, 910, 999 |
| LmnI | GCTCC | 2 cut(s) | 65, 1138 |
| Lsp1109I | GCAGC | 1 cut(s) | 33 |
| LweI | GCATC | 3 cut(s) | 39, 796, 913 |
| MaeI | CTAG | 1 cut(s) | 888 |
| MaeII | ACGT | 3 cut(s) | 498, 697, 768 |
| MaeIII | GTNAC | 6 cut(s) | 89, 663, 764, 817, 867, 1087 |
| MalI | GATC | 7 cut(s) | 141, 228, 319, 529, 568, 912, 1001 |
| MboI | GATC | 7 cut(s) | 139, 226, 317, 527, 566, 910, 999 |
| MboII | GAAGA | 7 cut(s) | 496, 532, 537, 911, 995, 1088, 1091 |
| MfeI | CAATTG | 1 cut(s) | 941 |
| MflI | RGATCY | 3 cut(s) | 317, 566, 999 |
| MlyI | GAGTC | 1 cut(s) | 366 |
| MmeI | TCCRAC | 1 cut(s) | 319 |
| MseI | TTAA | 7 cut(s) | 333, 443, 708, 789, 794, 1064, 1133 |
| MspA1I | CMGCKG | 1 cut(s) | 149 |
| MspCI | CTTAAG | 1 cut(s) | 793 |
| MspR9I | CCNGG | 2 cut(s) | 64, 222 |
| MunI | CAATTG | 1 cut(s) | 941 |
| Mva1269I | GAATGC | 1 cut(s) | 1170 |
| MvaI | CCWGG | 2 cut(s) | 64, 222 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 66, 1049 |
| NdeI | CATATG | 1 cut(s) | 675 |
| NdeII | GATC | 7 cut(s) | 139, 226, 317, 527, 566, 910, 999 |
| NlaIII | CATG | 3 cut(s) | 825, 1022, 1052 |
| NlaIV | GGNNCC | 5 cut(s) | 61, 133, 162, 219, 319 |
| NmuCI | GTSAC | 4 cut(s) | 764, 817, 867, 1087 |
| NspI | RCATGY | 3 cut(s) | 825, 1022, 1052 |
| PaeI | GCATGC | 1 cut(s) | 1022 |
| PceI | AGGCCT | 1 cut(s) | 181 |
| PctI | GAATGC | 1 cut(s) | 1170 |
| PfeI | GAWTC | 3 cut(s) | 6, 857, 929 |
| PkrI | GCNGC | 3 cut(s) | 23, 148, 994 |
| PleI | GAGTC | 1 cut(s) | 365 |
| PpsI | GAGTC | 1 cut(s) | 365 |
| Ppu21I | YACGTR | 1 cut(s) | 698 |
| PpuMI | RGGWCCY | 1 cut(s) | 1058 |
| Psp5II | RGGWCCY | 1 cut(s) | 1058 |
| Psp6I | CCWGG | 2 cut(s) | 62, 220 |
| PspEI | GGTNACC | 1 cut(s) | 1087 |
| PspGI | CCWGG | 2 cut(s) | 62, 220 |
| PspN4I | GGNNCC | 5 cut(s) | 61, 133, 162, 219, 319 |
| PspPI | GGNCC | 1 cut(s) | 1058 |
| PspPPI | RGGWCCY | 1 cut(s) | 1058 |
| PsuI | RGATCY | 3 cut(s) | 317, 566, 999 |
| RsaI | GTAC | 3 cut(s) | 162, 296, 455 |
| RsaNI | GTAC | 3 cut(s) | 161, 295, 454 |
| SaqAI | TTAA | 7 cut(s) | 333, 443, 708, 789, 794, 1064, 1133 |
| SatI | GCNGC | 3 cut(s) | 22, 147, 993 |
| Sau3AI | GATC | 7 cut(s) | 139, 226, 317, 527, 566, 910, 999 |
| Sau96I | GGNCC | 1 cut(s) | 1058 |
| ScaI | AGTACT | 1 cut(s) | 296 |
| SchI | GAGTC | 1 cut(s) | 366 |
| ScrFI | CCNGG | 2 cut(s) | 64, 222 |
| SfaNI | GCATC | 3 cut(s) | 39, 796, 913 |
| SinI | GGWCC | 1 cut(s) | 1058 |
| SmlI | CTYRAG | 1 cut(s) | 793 |
| SmoI | CTYRAG | 1 cut(s) | 793 |
| SphI | GCATGC | 1 cut(s) | 1022 |
| SseBI | AGGCCT | 1 cut(s) | 181 |
| SsiI | CCGC | 2 cut(s) | 147, 992 |
| SspMI | CTAG | 1 cut(s) | 888 |
| StuI | AGGCCT | 1 cut(s) | 181 |
| StyD4I | CCNGG | 2 cut(s) | 62, 220 |
| TaaI | ACNGT | 4 cut(s) | 109, 366, 724, 1028 |
| TaiI | ACGT | 3 cut(s) | 501, 700, 771 |
| TaqI | TCGA | 2 cut(s) | 153, 234 |
| TatI | WGTACW | 2 cut(s) | 294, 453 |
| TauI | GCSGC | 2 cut(s) | 149, 995 |
| TfiI | GAWTC | 3 cut(s) | 6, 857, 929 |
| Tru1I | TTAA | 7 cut(s) | 333, 443, 708, 789, 794, 1064, 1133 |
| Tru9I | TTAA | 7 cut(s) | 333, 443, 708, 789, 794, 1064, 1133 |
| TscAI | CASTG | 2 cut(s) | 112, 201 |
| TseFI | GTSAC | 4 cut(s) | 764, 817, 867, 1087 |
| TseI | GCWGC | 1 cut(s) | 21 |
| Tsp45I | GTSAC | 4 cut(s) | 764, 817, 867, 1087 |
| TspDTI | ATGAA | 3 cut(s) | 504, 1140, 1163 |
| TspRI | CASTG | 2 cut(s) | 112, 201 |
| Vha464I | CTTAAG | 1 cut(s) | 793 |
| VpaK11BI | GGWCC | 1 cut(s) | 1058 |
| XapI | RAATTY | 2 cut(s) | 329, 344 |
| XceI | RCATGY | 3 cut(s) | 825, 1022, 1052 |
| XspI | CTAG | 1 cut(s) | 888 |
| ZrmI | AGTACT | 1 cut(s) | 296 |