Tudor-like domain present in plant sequences.
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G20030 AT5G20030 |
| fragaria_vesca | FvH4_1g03900 FvH4_1g03900 |
| malus_domestica | MD02G1037200.v1.1 MD15G1177400.v1.1 |
| prunus_persica | Prupe.7G238100_v2.0.a1 |
| pyrus_communis | pycom02g03050 pycom15g15870 |
| rosa_chinensis | RchiOBHm_Chr2g0089371 |
| rosa_laevigata | RLG00000016021 |
| rosa_multiflora | Rmu_co8276293.1_g000001 Rmu_sc0000197.1_g000025 Rmu_sc0003382.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00152020 |
| rosa_rugosa | Rorug01G0489600 Rorug01G0489700 Rorug01G0489800 Rorug01G0489900 Rorug01G0490000 Rorug01G0490100 Rorug01G0490200 |
| rosa_samantha | Rh2AG045300 Rh2BG043800 Rh2CG045700 Rh2DG045200 |
| rosa_wichuraiana | Rw2G003740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 13, 210 |
| AclWI | GGATC | 1 cut(s) | 251 |
| AcsI | RAATTY | 1 cut(s) | 224 |
| AfeI | AGCGCT | 1 cut(s) | 126 |
| AgsI | TTSAA | 1 cut(s) | 278 |
| AhlI | ACTAGT | 1 cut(s) | 194 |
| AluBI | AGCT | 4 cut(s) | 7, 188, 274, 311 |
| AluI | AGCT | 4 cut(s) | 7, 188, 274, 311 |
| Alw26I | GTCTC | 2 cut(s) | 82, 185 |
| AlwI | GGATC | 1 cut(s) | 251 |
| Aor51HI | AGCGCT | 1 cut(s) | 126 |
| ApeKI | GCWGC | 1 cut(s) | 164 |
| ApoI | RAATTY | 1 cut(s) | 224 |
| AspLEI | GCGC | 1 cut(s) | 127 |
| AsuHPI | GGTGA | 3 cut(s) | 61, 97, 208 |
| BbvI | GCAGC | 1 cut(s) | 151 |
| BccI | CCATC | 1 cut(s) | 62 |
| BceAI | ACGGC | 1 cut(s) | 129 |
| BcoDI | GTCTC | 2 cut(s) | 82, 185 |
| BcuI | ACTAGT | 1 cut(s) | 194 |
| BfaI | CTAG | 2 cut(s) | 195, 231 |
| BfmI | CTRYAG | 1 cut(s) | 137 |
| BfoI | RGCGCY | 1 cut(s) | 128 |
| BisI | GCNGC | 1 cut(s) | 165 |
| BlsI | GCNGC | 1 cut(s) | 166 |
| BsaWI | WCCGGW | 1 cut(s) | 71 |
| BseGI | GGATG | 1 cut(s) | 54 |
| BseMII | CTCAG | 1 cut(s) | 180 |
| BseXI | GCAGC | 1 cut(s) | 151 |
| BsiSI | CCGG | 1 cut(s) | 72 |
| BsmAI | GTCTC | 2 cut(s) | 82, 185 |
| Bsp143I | GATC | 3 cut(s) | 82, 93, 256 |
| BspACI | CCGC | 2 cut(s) | 13, 210 |
| BspCNI | CTCAG | 1 cut(s) | 181 |
| BspMAI | CTGCAG | 1 cut(s) | 141 |
| BspPI | GGATC | 1 cut(s) | 251 |
| BssMI | GATC | 3 cut(s) | 82, 93, 256 |
| BstDEI | CTNAG | 1 cut(s) | 189 |
| BstF5I | GGATG | 1 cut(s) | 54 |
| BstH2I | RGCGCY | 1 cut(s) | 128 |
| BstHHI | GCGC | 1 cut(s) | 127 |
| BstKTI | GATC | 3 cut(s) | 85, 96, 259 |
| BstMAI | GTCTC | 2 cut(s) | 82, 185 |
| BstMBI | GATC | 3 cut(s) | 82, 93, 256 |
| BstSFI | CTRYAG | 1 cut(s) | 137 |
| BstV1I | GCAGC | 1 cut(s) | 151 |
| BstX2I | RGATCY | 1 cut(s) | 256 |
| BstYI | RGATCY | 1 cut(s) | 256 |
| BtgZI | GCGATG | 1 cut(s) | 13 |
| BtsCI | GGATG | 1 cut(s) | 54 |
| CfoI | GCGC | 1 cut(s) | 127 |
| CviAII | CATG | 1 cut(s) | 220 |
| CviJI | RGCY | 8 cut(s) | 7, 103, 144, 164, 188, 274, 311, 317 |
| CviKI_1 | RGCY | 8 cut(s) | 7, 103, 144, 164, 188, 274, 311, 317 |
| DdeI | CTNAG | 1 cut(s) | 189 |
| DpnI | GATC | 3 cut(s) | 84, 95, 258 |
| DpnII | GATC | 3 cut(s) | 82, 93, 256 |
| Eco47III | AGCGCT | 1 cut(s) | 126 |
| FaeI | CATG | 1 cut(s) | 223 |
| FaiI | YATR | 3 cut(s) | 90, 221, 291 |
| FatI | CATG | 1 cut(s) | 219 |
| Fnu4HI | GCNGC | 1 cut(s) | 165 |
| FokI | GGATG | 1 cut(s) | 41 |
| Fsp4HI | GCNGC | 1 cut(s) | 165 |
| FspBI | CTAG | 2 cut(s) | 195, 231 |
| GlaI | GCGC | 1 cut(s) | 126 |
| GluI | GCNGC | 1 cut(s) | 165 |
| HaeII | RGCGCY | 1 cut(s) | 128 |
| HapII | CCGG | 1 cut(s) | 72 |
| HhaI | GCGC | 1 cut(s) | 127 |
| Hin1II | CATG | 1 cut(s) | 223 |
| Hin6I | GCGC | 1 cut(s) | 125 |
| HinP1I | GCGC | 1 cut(s) | 125 |
| HindIII | AAGCTT | 1 cut(s) | 309 |
| HinfI | GANTC | 2 cut(s) | 75, 213 |
| HpaII | CCGG | 1 cut(s) | 72 |
| HphI | GGTGA | 3 cut(s) | 61, 97, 208 |
| Hpy166II | GTNNAC | 1 cut(s) | 182 |
| Hpy188I | TCNGA | 1 cut(s) | 82 |
| Hpy188III | TCNNGA | 1 cut(s) | 151 |
| Hpy8I | GTNNAC | 1 cut(s) | 182 |
| HpyAV | CCTTC | 1 cut(s) | 272 |
| HpyCH4V | TGCA | 1 cut(s) | 139 |
| HpyF3I | CTNAG | 1 cut(s) | 189 |
| Hsp92II | CATG | 1 cut(s) | 223 |
| HspAI | GCGC | 1 cut(s) | 125 |
| Kzo9I | GATC | 3 cut(s) | 82, 93, 256 |
| LpnPI | CCDG | 2 cut(s) | 85, 164 |
| Lsp1109I | GCAGC | 1 cut(s) | 151 |
| MaeI | CTAG | 2 cut(s) | 195, 231 |
| MaeIII | GTNAC | 2 cut(s) | 214, 233 |
| MalI | GATC | 3 cut(s) | 84, 95, 258 |
| MboI | GATC | 3 cut(s) | 82, 93, 256 |
| MflI | RGATCY | 1 cut(s) | 256 |
| MluCI | AATT | 1 cut(s) | 224 |
| MlyI | GAGTC | 2 cut(s) | 84, 222 |
| MnlI | CCTC | 1 cut(s) | 68 |
| MseI | TTAA | 1 cut(s) | 297 |
| MspI | CCGG | 1 cut(s) | 72 |
| NdeII | GATC | 3 cut(s) | 82, 93, 256 |
| NlaIII | CATG | 1 cut(s) | 223 |
| NmuCI | GTSAC | 2 cut(s) | 214, 233 |
| PkrI | GCNGC | 1 cut(s) | 166 |
| PleI | GAGTC | 2 cut(s) | 83, 221 |
| PpsI | GAGTC | 2 cut(s) | 83, 221 |
| PstI | CTGCAG | 1 cut(s) | 141 |
| PsuI | RGATCY | 1 cut(s) | 256 |
| SaqAI | TTAA | 1 cut(s) | 297 |
| SatI | GCNGC | 1 cut(s) | 165 |
| Sau3AI | GATC | 3 cut(s) | 82, 93, 256 |
| SchI | GAGTC | 2 cut(s) | 84, 222 |
| SetI | ASST | 6 cut(s) | 9, 181, 190, 276, 283, 313 |
| SfcI | CTRYAG | 1 cut(s) | 137 |
| SgeI | CNNG | 7 cut(s) | 84, 163, 197, 207, 232, 243, 287 |
| SpeI | ACTAGT | 1 cut(s) | 194 |
| Sse9I | AATT | 1 cut(s) | 224 |
| SsiI | CCGC | 2 cut(s) | 13, 210 |
| SspMI | CTAG | 2 cut(s) | 195, 231 |
| TasI | AATT | 1 cut(s) | 224 |
| Tru1I | TTAA | 1 cut(s) | 297 |
| Tru9I | TTAA | 1 cut(s) | 297 |
| TseFI | GTSAC | 2 cut(s) | 214, 233 |
| TseI | GCWGC | 1 cut(s) | 164 |
| Tsp45I | GTSAC | 2 cut(s) | 214, 233 |
| TspDTI | ATGAA | 2 cut(s) | 17, 236 |
| XapI | RAATTY | 1 cut(s) | 224 |
| XspI | CTAG | 2 cut(s) | 195, 231 |