Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0011454

Physical Location & Seq

Genomic Coordinates Reverse (-)

21880752 .. 21884824

Gene Structure 4073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G265000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1140 bp

ATGTCAGGCAGCGAACAAGAGCGAACAGCAAAGTCAGGGGCGGAGGAGCAGTCGCTGAGGGTAGCCGTAGCCATTTCTCTTCTCCGATCAAAGCTTCTTCAAAAGCAGCAAAAGCAGCCTCCTCCTCATCCTGTTGATCAATCCGACGCTCTCCGATGGAAGCGAAAGGCCAAGGAGCGAAAGCAAGAGCTTTTGAGACTCCGACAAGATCTCAACGAAGCCGAAGATGCTTCGCAGTGCGACTTGTTCCCGCAAAGCGCTTCTTGCAAGTGTTATTTCTTTGATAATTTGGGGAAACTAAGCCCTAATAAGCGGCTTCCAGATCCTTCTCAGTGCAGATTCAATGATGTCTTGCGACGCAGATTTCTCAGGCACGTACGTTTTAAGGAAAGGAGAAGAAGAACAAGTAGTTCATCCCAGCGACGCCATTTTGCAGACATAAACAGTGAAGATGAAATGGAGCAACTTAGGGCCTCAGTCGATTTTCTTGTGGAGCTTTGTGAAACCGGTTCTCCTGTGGAGGAGACCAATGTGGCAAATTGGTCACACCAAGCTGCAGACTTTATTTTAGCTTCATTGAAGAACCTGTTATCAGTGGCAATGAATGCGGAACTCATAGAAGGAATTATCAGCAGCTTAATCACGCGTTTGGTTGGAAGGATGTGTTGCCCCTTGCAAGGAAACGCATCAAAACACTCTGAACCTGATGCTCAGTTTTTCATTCAGCACTTGATCCGAAAGCTTGGAAGTGAGCCCTACATTGGTCAGCGTGCATTATTCTTAGTATCTCAGAGAATCTCTGTTCTTGCAGAGAATTTCCTTTTCACAGATCCATTTGATGATGCTTTTACAAACATGCATCAATGCATGTTCATGCTGATCCAGCTTACAGAGTTTTTGGTATCCGATTACCTGTCAGAATGGTCAAAGGATGAAGGTTTTGACACCATGGTCTTCGAAGAGTGGGTAGCATCAATGGTTCACGCACGCAAGGCATTACAAGTTTTGGAAAGCAGAAATGGGGTCTATGTGTTATACATGGAACGAGTCATAGGTGAGTTGGCAAGGCATGTCGGCCTAAATATGTCCCTGCACAAGCTCAAACGCGAAATTCTTGATAGCCTGTTGTTCCACCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000212 GO:0000226 GO:0000280 GO:0003006 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0007140 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009553 GO:0009555 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022607 GO:0032501 GO:0032502 GO:0032504 GO:0034293 GO:0034641 GO:0035825 GO:0042138 GO:0043170 GO:0043934 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044703 GO:0045132 GO:0045143 GO:0046483 GO:0048229 GO:0048232 GO:0048236 GO:0048285 GO:0048609 GO:0048856 GO:0048869 GO:0051026 GO:0051276 GO:0051321 GO:0051704 GO:0061982 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

380

Amino Acids

43.72

Weight (kDa)

7.65

Isoelectric Point (pI)

65.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57880
fragaria_vesca	FvH4_1g00730 FvH4_1g00730
malus_domestica	MD15G1150700.v1.1
prunus_persica	Prupe.7G265000_v2.0.a1
pyrus_communis	pycom15g13500
rosa_chinensis	RchiOBHm_Chr2g0085451
rosa_laevigata	RLG00000015689 RLG00000015690 RLG00000015691
rosa_multiflora	Rmu_sc0004926.1_g000021 Rmu_sc0004926.1_g000026 Rmu_sc0007908.1_g000011
rosa_roxburghii	Rroxscaffold_2G00155370
rosa_rugosa	Rorug01G0460500
rosa_samantha	Rh2AG008700 Rh2BG010000 Rh2CG010500 Rh2DG011000
rosa_wichuraiana	Rw2G000840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	950
AccII	CGCG	2 cut(s)	646, 1107
AciI	CCGC	4 cut(s)	41, 251, 313, 608
AclWI	GGATC	4 cut(s)	317, 727, 824, 874
AcsI	RAATTY	2 cut(s)	814, 1110
AcyI	GRCGYC	1 cut(s)	424
AfaI	GTAC	1 cut(s)	378
AfeI	AGCGCT	1 cut(s)	259
AfiI	CCNNNNNNNGG	2 cut(s)	677, 761
AflIII	ACRYGT	1 cut(s)	644
AgeI	ACCGGT	1 cut(s)	506
AgsI	TTSAA	3 cut(s)	101, 343, 580
AluBI	AGCT	9 cut(s)	94, 190, 496, 554, 572, 636, 742, 886, 1099
AluI	AGCT	9 cut(s)	94, 190, 496, 554, 572, 636, 742, 886, 1099
Alw26I	GTCTC	2 cut(s)	190, 518
AlwI	GGATC	4 cut(s)	317, 727, 824, 874
AlwNI	CAGNNNCTG	1 cut(s)	55
Aor51HI	AGCGCT	1 cut(s)	259
AoxI	GGCC	3 cut(s)	168, 471, 1075
ApeKI	GCWGC	5 cut(s)	9, 106, 115, 554, 633
ApoI	RAATTY	2 cut(s)	814, 1110
AsiGI	ACCGGT	1 cut(s)	506
AspLEI	GCGC	1 cut(s)	260
AspS9I	GGNCC	1 cut(s)	471
AsuHPI	GGTGA	1 cut(s)	1067
AsuII	TTCGAA	1 cut(s)	957
BanII	GRGCYC	1 cut(s)	756
BbsI	GAAGAC	1 cut(s)	946
BbvCI	CCTCAGC	1 cut(s)	56
BbvI	GCAGC	5 cut(s)	21, 118, 127, 541, 645
BccI	CCATC	1 cut(s)	150
BceAI	ACGGC	1 cut(s)	50
BciVI	GTATCC	1 cut(s)	913
BclI	TGATCA	1 cut(s)	136
BcoDI	GTCTC	2 cut(s)	190, 518
BfmI	CTRYAG	1 cut(s)	555
BfoI	RGCGCY	1 cut(s)	261
BfuI	GTATCC	1 cut(s)	913
BglII	AGATCT	1 cut(s)	208
BisI	GCNGC	6 cut(s)	10, 107, 116, 314, 555, 634
BlsI	GCNGC	6 cut(s)	11, 108, 117, 315, 556, 635
BmgT120I	GGNCC	1 cut(s)	471
BmsI	GCATC	6 cut(s)	217, 695, 697, 832, 868, 980
BpiI	GAAGAC	1 cut(s)	946
Bpu10I	CCTNAGC	1 cut(s)	56
Bpu14I	TTCGAA	1 cut(s)	957
BsaAI	YACGTR	1 cut(s)	376
BsaHI	GRCGYC	1 cut(s)	424
BsaI	GGTCTC	1 cut(s)	518
BsaJI	CCNNGG	2 cut(s)	171, 948
BsaWI	WCCGGW	1 cut(s)	506
BsaXI	ACNNNNNCTCC	4 cut(s)	35, 65, 496, 526
Bsc4I	CCNNNNNNNGG	2 cut(s)	677, 761
Bse118I	RCCGGY	1 cut(s)	506
Bse3DI	GCAATG	1 cut(s)	606
BseDI	CCNNGG	2 cut(s)	171, 948
BseGI	GGATG	4 cut(s)	127, 413, 666, 937
BseLI	CCNNNNNNNGG	2 cut(s)	677, 761
BseMI	GCAATG	1 cut(s)	606
BseMII	CTCAG	6 cut(s)	47, 344, 382, 489, 725, 803
BseRI	GAGGAG	4 cut(s)	59, 111, 114, 536
BseXI	GCAGC	5 cut(s)	21, 118, 127, 541, 645
BseYI	CCCAGC	1 cut(s)	417
BsgI	GTGCAG	2 cut(s)	355, 1076
Bsh1236I	CGCG	2 cut(s)	646, 1107
BshFI	GGCC	3 cut(s)	170, 473, 1077
BshTI	ACCGGT	1 cut(s)	506
BsiSI	CCGG	1 cut(s)	507
BsiWI	CGTACG	1 cut(s)	376
BslFI	GGGAC	1 cut(s)	1072
BslI	CCNNNNNNNGG	2 cut(s)	677, 761
BsmAI	GTCTC	2 cut(s)	190, 518
BsmFI	GGGAC	1 cut(s)	1072
BsmI	GAATGC	1 cut(s)	610
BsnI	GGCC	3 cut(s)	170, 473, 1077
Bso31I	GGTCTC	1 cut(s)	518
Bsp119I	TTCGAA	1 cut(s)	957
Bsp1286I	GDGCHC	1 cut(s)	756
Bsp143I	GATC	7 cut(s)	86, 136, 208, 322, 732, 829, 879
Bsp19I	CCATGG	1 cut(s)	948
BspACI	CCGC	4 cut(s)	41, 251, 313, 608
BspANI	GGCC	3 cut(s)	170, 473, 1077
BspCNI	CTCAG	6 cut(s)	48, 343, 381, 488, 724, 802
BspFNI	CGCG	2 cut(s)	646, 1107
BspMAI	CTGCAG	1 cut(s)	559
BspPI	GGATC	4 cut(s)	317, 727, 824, 874
BspT104I	TTCGAA	1 cut(s)	957
BspTNI	GGTCTC	1 cut(s)	518
BsrDI	GCAATG	1 cut(s)	606
BsrFI	RCCGGY	1 cut(s)	506
BssAI	RCCGGY	1 cut(s)	506
BssECI	CCNNGG	2 cut(s)	171, 948
BssMI	GATC	7 cut(s)	86, 136, 208, 322, 732, 829, 879
BssNI	GRCGYC	1 cut(s)	424
BssT1I	CCWWGG	2 cut(s)	171, 948
Bst4CI	ACNGT	1 cut(s)	446
Bst6I	CTCTTC	2 cut(s)	84, 954
BstACI	GRCGYC	1 cut(s)	424
BstAPI	GCANNNNNTGC	1 cut(s)	605
BstBAI	YACGTR	1 cut(s)	376
BstBI	TTCGAA	1 cut(s)	957
BstC8I	GCNNGC	2 cut(s)	771, 988
BstDEI	CTNAG	9 cut(s)	56, 299, 330, 368, 467, 475, 711, 781, 789
BstDSI	CCRYGG	1 cut(s)	948
BstF5I	GGATG	4 cut(s)	127, 413, 666, 937
BstFNI	CGCG	2 cut(s)	646, 1107
BstH2I	RGCGCY	1 cut(s)	261
BstHHI	GCGC	1 cut(s)	260
BstKTI	GATC	7 cut(s)	89, 139, 211, 325, 735, 832, 882
BstMAI	GTCTC	2 cut(s)	190, 518
BstMBI	GATC	7 cut(s)	86, 136, 208, 322, 732, 829, 879
BstMWI	GCNNNNNNNGC	7 cut(s)	112, 115, 227, 264, 605, 883, 992
BstNSI	RCATGY	3 cut(s)	859, 871, 1073
BstSFI	CTRYAG	1 cut(s)	555
BstUI	CGCG	2 cut(s)	646, 1107
BstV1I	GCAGC	5 cut(s)	21, 118, 127, 541, 645
BstV2I	GAAGAC	1 cut(s)	946
BstX2I	RGATCY	3 cut(s)	208, 322, 829
BstYI	RGATCY	3 cut(s)	208, 322, 829
BsuI	GTATCC	1 cut(s)	913
BsuRI	GGCC	3 cut(s)	170, 473, 1077
BtgI	CCRYGG	1 cut(s)	948
BtsCI	GGATG	4 cut(s)	127, 413, 666, 937
BtsI	GCAGTG	1 cut(s)	242
BtsIMutI	CAGTG	5 cut(s)	242, 338, 451, 600, 1135
Cac8I	GCNNGC	2 cut(s)	771, 988
CaiI	CAGNNNCTG	1 cut(s)	55
CfoI	GCGC	1 cut(s)	260
Cfr10I	RCCGGY	1 cut(s)	506
Cfr13I	GGNCC	1 cut(s)	471
CseI	GACGC	3 cut(s)	155, 366, 432
Csp6I	GTAC	1 cut(s)	377
CspAI	ACCGGT	1 cut(s)	506
CviAII	CATG	6 cut(s)	856, 868, 874, 949, 1039, 1070
CviQI	GTAC	1 cut(s)	377
DdeI	CTNAG	9 cut(s)	56, 299, 330, 368, 467, 475, 711, 781, 789
DpnI	GATC	7 cut(s)	88, 138, 210, 324, 734, 831, 881
DpnII	GATC	7 cut(s)	86, 136, 208, 322, 732, 829, 879
DrdI	GACNNNNNNGTC	1 cut(s)	950
DseDI	GACNNNNNNGTC	1 cut(s)	950
Eam1104I	CTCTTC	2 cut(s)	84, 954
EarI	CTCTTC	2 cut(s)	84, 954
EciI	GGCGGA	1 cut(s)	56
Eco130I	CCWWGG	2 cut(s)	171, 948
Eco24I	GRGCYC	1 cut(s)	756
Eco31I	GGTCTC	1 cut(s)	518
Eco47III	AGCGCT	1 cut(s)	259
EcoO109I	RGGNCCY	1 cut(s)	471
EcoT14I	CCWWGG	2 cut(s)	171, 948
EcoT22I	ATGCAT	2 cut(s)	861, 869
EcoT38I	GRGCYC	1 cut(s)	756
ErhI	CCWWGG	2 cut(s)	171, 948
FaeI	CATG	6 cut(s)	859, 871, 877, 952, 1042, 1073
FalI	AAGNNNNNCTT	2 cut(s)	247, 279
FaqI	GGGAC	1 cut(s)	1072
FatI	CATG	6 cut(s)	855, 867, 873, 948, 1038, 1069
FauI	CCCGC	1 cut(s)	258
FbaI	TGATCA	1 cut(s)	136
Fnu4HI	GCNGC	6 cut(s)	10, 107, 116, 314, 555, 634
FokI	GGATG	4 cut(s)	114, 400, 673, 944
FriOI	GRGCYC	1 cut(s)	756
Fsp4HI	GCNGC	6 cut(s)	10, 107, 116, 314, 555, 634
GlaI	GCGC	1 cut(s)	259
GluI	GCNGC	6 cut(s)	10, 107, 116, 314, 555, 634
GsaI	CCCAGC	1 cut(s)	421
HaeII	RGCGCY	1 cut(s)	261
HaeIII	GGCC	3 cut(s)	170, 473, 1077
HapII	CCGG	1 cut(s)	507
HgaI	GACGC	3 cut(s)	155, 366, 432
HhaI	GCGC	1 cut(s)	260
Hin1I	GRCGYC	1 cut(s)	424
Hin1II	CATG	6 cut(s)	859, 871, 877, 952, 1042, 1073
Hin6I	GCGC	1 cut(s)	258
HinP1I	GCGC	1 cut(s)	258
HindIII	AAGCTT	2 cut(s)	92, 740
HinfI	GANTC	4 cut(s)	198, 339, 795, 1047
HpaII	CCGG	1 cut(s)	507
HphI	GGTGA	1 cut(s)	1067
Hpy166II	GTNNAC	1 cut(s)	982
Hpy188I	TCNGA	9 cut(s)	86, 145, 155, 203, 700, 737, 792, 907, 919
Hpy188III	TCNNGA	2 cut(s)	320, 1115
Hpy8I	GTNNAC	1 cut(s)	982
Hpy99I	CGWCG	3 cut(s)	149, 360, 426
HpyAV	CCTTC	4 cut(s)	336, 614, 651, 929
HpyCH4III	ACNGT	1 cut(s)	446
HpyCH4IV	ACGT	2 cut(s)	375, 379
HpyF10VI	GCNNNNNNNGC	7 cut(s)	112, 115, 227, 264, 605, 883, 992
HpyF3I	CTNAG	9 cut(s)	56, 299, 330, 368, 467, 475, 711, 781, 789
HpySE526I	ACGT	2 cut(s)	375, 379
Hsp92I	GRCGYC	1 cut(s)	424
Hsp92II	CATG	6 cut(s)	859, 871, 877, 952, 1042, 1073
HspAI	GCGC	1 cut(s)	258
Ksp22I	TGATCA	1 cut(s)	136
Kzo9I	GATC	7 cut(s)	86, 136, 208, 322, 732, 829, 879
LmnI	GCTCC	4 cut(s)	46, 175, 460, 493
Lsp1109I	GCAGC	5 cut(s)	21, 118, 127, 541, 645
LweI	GCATC	6 cut(s)	217, 695, 697, 832, 868, 980
MaeII	ACGT	2 cut(s)	375, 379
MaeIII	GTNAC	1 cut(s)	543
MalI	GATC	7 cut(s)	88, 138, 210, 324, 734, 831, 881
MboI	GATC	7 cut(s)	86, 136, 208, 322, 732, 829, 879
MboII	GAAGA	9 cut(s)	71, 89, 236, 408, 411, 461, 592, 946, 971
MflI	RGATCY	3 cut(s)	208, 322, 829
MhlI	GDGCHC	1 cut(s)	756
MluCI	AATT	5 cut(s)	286, 538, 624, 814, 1110
MluI	ACGCGT	1 cut(s)	644
MlyI	GAGTC	2 cut(s)	192, 1056
MmeI	TCCRAC	3 cut(s)	168, 226, 634
MnlI	CCTC	7 cut(s)	37, 51, 129, 132, 135, 484, 514
Mph1103I	ATGCAT	2 cut(s)	861, 869
MseI	TTAA	2 cut(s)	384, 638
MslI	CAYNNNNRTG	1 cut(s)	872
MspI	CCGG	1 cut(s)	507
Mva1269I	GAATGC	1 cut(s)	610
MvnI	CGCG	2 cut(s)	646, 1107
MwoI	GCNNNNNNNGC	7 cut(s)	112, 115, 227, 264, 605, 883, 992
NcoI	CCATGG	1 cut(s)	948
NdeII	GATC	7 cut(s)	86, 136, 208, 322, 732, 829, 879
NlaIII	CATG	6 cut(s)	859, 871, 877, 952, 1042, 1073
NmuCI	GTSAC	1 cut(s)	543
NsiI	ATGCAT	2 cut(s)	861, 869
NspI	RCATGY	3 cut(s)	859, 871, 1073
NspV	TTCGAA	1 cut(s)	957
PctI	GAATGC	1 cut(s)	610
PfeI	GAWTC	2 cut(s)	339, 795
Pfl23II	CGTACG	1 cut(s)	376
PinAI	ACCGGT	1 cut(s)	506
PkrI	GCNGC	6 cut(s)	11, 108, 117, 315, 556, 635
PleI	GAGTC	2 cut(s)	192, 1055
PpsI	GAGTC	2 cut(s)	192, 1055
Ppu21I	YACGTR	1 cut(s)	376
PspFI	CCCAGC	1 cut(s)	417
PspLI	CGTACG	1 cut(s)	376
PspPI	GGNCC	1 cut(s)	471
PstI	CTGCAG	1 cut(s)	559
PstNI	CAGNNNCTG	1 cut(s)	55
PsuI	RGATCY	3 cut(s)	208, 322, 829
RsaI	GTAC	1 cut(s)	378
RsaNI	GTAC	1 cut(s)	377
RseI	CAYNNNNRTG	1 cut(s)	872
SaqAI	TTAA	2 cut(s)	384, 638
SatI	GCNGC	6 cut(s)	10, 107, 116, 314, 555, 634
Sau3AI	GATC	7 cut(s)	86, 136, 208, 322, 732, 829, 879
Sau96I	GGNCC	1 cut(s)	471
SchI	GAGTC	2 cut(s)	192, 1056
SduI	GDGCHC	1 cut(s)	756
SfaNI	GCATC	6 cut(s)	217, 695, 697, 832, 868, 980
SfcI	CTRYAG	1 cut(s)	555
SfuI	TTCGAA	1 cut(s)	957
SmiMI	CAYNNNNRTG	1 cut(s)	872
Sse9I	AATT	5 cut(s)	286, 538, 624, 814, 1110
SsiI	CCGC	4 cut(s)	41, 251, 313, 608
StyI	CCWWGG	2 cut(s)	171, 948
TaaI	ACNGT	1 cut(s)	446
TaiI	ACGT	2 cut(s)	378, 382
TaqI	TCGA	2 cut(s)	480, 957
TasI	AATT	5 cut(s)	286, 538, 624, 814, 1110
TauI	GCSGC	1 cut(s)	316
TfiI	GAWTC	2 cut(s)	339, 795
Tru1I	TTAA	2 cut(s)	384, 638
Tru9I	TTAA	2 cut(s)	384, 638
TscAI	CASTG	4 cut(s)	242, 338, 451, 600
TseFI	GTSAC	1 cut(s)	543
TseI	GCWGC	5 cut(s)	9, 106, 115, 554, 633
Tsp45I	GTSAC	1 cut(s)	543
TspDTI	ATGAA	7 cut(s)	402, 468, 564, 617, 709, 862, 948
TspRI	CASTG	4 cut(s)	242, 338, 451, 600
XapI	RAATTY	2 cut(s)	814, 1110
XceI	RCATGY	3 cut(s)	859, 871, 1073
Zsp2I	ATGCAT	2 cut(s)	861, 869

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.