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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G57880 |
| fragaria_vesca | FvH4_1g00730 FvH4_1g00730 |
| malus_domestica | MD15G1150700.v1.1 |
| prunus_persica | Prupe.7G265000_v2.0.a1 |
| pyrus_communis | pycom15g13500 |
| rosa_chinensis | RchiOBHm_Chr2g0085451 |
| rosa_laevigata | RLG00000015689 RLG00000015690 RLG00000015691 |
| rosa_multiflora | Rmu_sc0004926.1_g000021 Rmu_sc0004926.1_g000026 Rmu_sc0007908.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00155370 |
| rosa_rugosa | Rorug01G0460500 |
| rosa_samantha | Rh2AG008700 Rh2BG010000 Rh2CG010500 Rh2DG011000 |
| rosa_wichuraiana | Rw2G000840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 342 |
| Acc65I | GGTACC | 1 cut(s) | 414 |
| AccB1I | GGYRCC | 1 cut(s) | 414 |
| AccBSI | CCGCTC | 1 cut(s) | 172 |
| AccII | CGCG | 2 cut(s) | 637, 1098 |
| AciI | CCGC | 8 cut(s) | 44, 68, 157, 172, 245, 399, 412, 545 |
| AclWI | GGATC | 4 cut(s) | 718, 815, 865, 1041 |
| AcoI | YGGCCR | 2 cut(s) | 72, 1053 |
| AcsI | RAATTY | 2 cut(s) | 805, 1101 |
| AcvI | CACGTG | 1 cut(s) | 367 |
| AcyI | GRCGYC | 2 cut(s) | 339, 349 |
| AfaI | GTAC | 1 cut(s) | 416 |
| AfeI | AGCGCT | 1 cut(s) | 253 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 171, 752 |
| AflIII | ACRYGT | 1 cut(s) | 635 |
| AgeI | ACCGGT | 1 cut(s) | 497 |
| AgsI | TTSAA | 4 cut(s) | 334, 376, 529, 571 |
| AleI | CACNNNNGTG | 1 cut(s) | 365 |
| Alw21I | GWGCWC | 2 cut(s) | 766, 945 |
| Alw26I | GTCTC | 2 cut(s) | 184, 793 |
| Alw44I | GTGCAC | 1 cut(s) | 762 |
| AlwI | GGATC | 4 cut(s) | 718, 815, 865, 1041 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 695 |
| Aor51HI | AGCGCT | 1 cut(s) | 253 |
| AoxI | GGCC | 5 cut(s) | 72, 162, 462, 601, 1053 |
| ApaLI | GTGCAC | 1 cut(s) | 762 |
| ApeKI | GCWGC | 6 cut(s) | 9, 58, 307, 451, 454, 624 |
| ApoI | RAATTY | 2 cut(s) | 805, 1101 |
| AsiGI | ACCGGT | 1 cut(s) | 497 |
| Asp718I | GGTACC | 1 cut(s) | 414 |
| AspLEI | GCGC | 2 cut(s) | 43, 254 |
| AspS9I | GGNCC | 2 cut(s) | 462, 743 |
| AsuII | TTCGAA | 1 cut(s) | 948 |
| AvaII | GGWCC | 1 cut(s) | 743 |
| BaeGI | GKGCMC | 1 cut(s) | 766 |
| BalI | TGGCCA | 2 cut(s) | 74, 1055 |
| BanI | GGYRCC | 1 cut(s) | 414 |
| BanII | GRGCYC | 1 cut(s) | 299 |
| BbrPI | CACGTG | 1 cut(s) | 367 |
| Bbv12I | GWGCWC | 2 cut(s) | 766, 945 |
| BbvI | GCAGC | 6 cut(s) | 21, 45, 294, 441, 463, 636 |
| BccI | CCATC | 2 cut(s) | 83, 144 |
| BcoDI | GTCTC | 2 cut(s) | 184, 793 |
| BfaI | CTAG | 1 cut(s) | 519 |
| BfmI | CTRYAG | 1 cut(s) | 1082 |
| BfoI | RGCGCY | 2 cut(s) | 44, 255 |
| BglII | AGATCT | 1 cut(s) | 202 |
| BisI | GCNGC | 7 cut(s) | 10, 44, 59, 308, 452, 455, 625 |
| BlpI | GCTNAGC | 1 cut(s) | 293 |
| BlsI | GCNGC | 7 cut(s) | 11, 45, 60, 309, 453, 456, 626 |
| Bme18I | GGWCC | 1 cut(s) | 743 |
| BmgT120I | GGNCC | 2 cut(s) | 462, 743 |
| BmiI | GGNNCC | 2 cut(s) | 416, 745 |
| BmsI | GCATC | 6 cut(s) | 211, 686, 688, 823, 859, 971 |
| Bpu10I | CCTNAGC | 1 cut(s) | 458 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 293 |
| Bpu14I | TTCGAA | 1 cut(s) | 948 |
| BsaAI | YACGTR | 1 cut(s) | 367 |
| BsaHI | GRCGYC | 2 cut(s) | 339, 349 |
| BsaJI | CCNNGG | 1 cut(s) | 165 |
| BsaWI | WCCGGW | 2 cut(s) | 497, 505 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 487, 517 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 171, 752 |
| Bse118I | RCCGGY | 1 cut(s) | 497 |
| Bse1I | ACTGG | 2 cut(s) | 400, 745 |
| BseDI | CCNNGG | 1 cut(s) | 165 |
| BseGI | GGATG | 2 cut(s) | 657, 928 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 171, 752 |
| BseMII | CTCAG | 6 cut(s) | 51, 179, 284, 335, 480, 794 |
| BseNI | ACTGG | 2 cut(s) | 400, 745 |
| BseSI | GKGCMC | 1 cut(s) | 766 |
| BseXI | GCAGC | 6 cut(s) | 21, 45, 294, 441, 463, 636 |
| BseYI | CCCAGC | 1 cut(s) | 408 |
| BsgI | GTGCAG | 1 cut(s) | 346 |
| Bsh1236I | CGCG | 2 cut(s) | 637, 1098 |
| Bsh1285I | CGRYCG | 1 cut(s) | 26 |
| BshFI | GGCC | 5 cut(s) | 74, 164, 464, 603, 1055 |
| BshNI | GGYRCC | 1 cut(s) | 414 |
| BshTI | ACCGGT | 1 cut(s) | 497 |
| BsiEI | CGRYCG | 1 cut(s) | 26 |
| BsiHKAI | GWGCWC | 2 cut(s) | 766, 945 |
| BsiSI | CCGG | 5 cut(s) | 47, 196, 311, 498, 506 |
| BslFI | GGGAC | 1 cut(s) | 729 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 171, 752 |
| BsmAI | GTCTC | 2 cut(s) | 184, 793 |
| BsmFI | GGGAC | 1 cut(s) | 729 |
| BsnI | GGCC | 5 cut(s) | 74, 164, 464, 603, 1055 |
| Bsp119I | TTCGAA | 1 cut(s) | 948 |
| Bsp1286I | GDGCHC | 3 cut(s) | 299, 766, 945 |
| Bsp143I | GATC | 8 cut(s) | 23, 89, 202, 723, 820, 870, 1033, 1089 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 293 |
| BspACI | CCGC | 8 cut(s) | 44, 68, 157, 172, 245, 399, 412, 545 |
| BspANI | GGCC | 5 cut(s) | 74, 164, 464, 603, 1055 |
| BspCNI | CTCAG | 6 cut(s) | 50, 180, 285, 334, 479, 793 |
| BspFNI | CGCG | 2 cut(s) | 637, 1098 |
| BspLI | GGNNCC | 2 cut(s) | 416, 745 |
| BspMAI | CTGCAG | 1 cut(s) | 1086 |
| BspPI | GGATC | 4 cut(s) | 718, 815, 865, 1041 |
| BspQI | GCTCTTC | 1 cut(s) | 950 |
| BspT104I | TTCGAA | 1 cut(s) | 948 |
| BspT107I | GGYRCC | 1 cut(s) | 414 |
| BsrBI | CCGCTC | 1 cut(s) | 172 |
| BsrFI | RCCGGY | 1 cut(s) | 497 |
| BsrI | ACTGG | 2 cut(s) | 400, 745 |
| BssAI | RCCGGY | 1 cut(s) | 497 |
| BssECI | CCNNGG | 1 cut(s) | 165 |
| BssMI | GATC | 8 cut(s) | 23, 89, 202, 723, 820, 870, 1033, 1089 |
| BssNI | GRCGYC | 2 cut(s) | 339, 349 |
| BssT1I | CCWWGG | 1 cut(s) | 165 |
| Bst4CI | ACNGT | 3 cut(s) | 437, 705, 940 |
| Bst6I | CTCTTC | 4 cut(s) | 87, 124, 945, 950 |
| BstACI | GRCGYC | 2 cut(s) | 339, 349 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 770 |
| BstBAI | YACGTR | 1 cut(s) | 367 |
| BstBI | TTCGAA | 1 cut(s) | 948 |
| BstDEI | CTNAG | 7 cut(s) | 37, 188, 293, 321, 458, 466, 780 |
| BstF5I | GGATG | 2 cut(s) | 657, 928 |
| BstFNI | CGCG | 2 cut(s) | 637, 1098 |
| BstH2I | RGCGCY | 2 cut(s) | 44, 255 |
| BstHHI | GCGC | 2 cut(s) | 43, 254 |
| BstKTI | GATC | 8 cut(s) | 26, 92, 205, 726, 823, 873, 1036, 1092 |
| BstMAI | GTCTC | 2 cut(s) | 184, 793 |
| BstMBI | GATC | 8 cut(s) | 23, 89, 202, 723, 820, 870, 1033, 1089 |
| BstMCI | CGRYCG | 1 cut(s) | 26 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 221, 258, 770, 983 |
| BstNSI | RCATGY | 3 cut(s) | 850, 862, 1064 |
| BstSFI | CTRYAG | 1 cut(s) | 1082 |
| BstSLI | GKGCMC | 1 cut(s) | 766 |
| BstUI | CGCG | 2 cut(s) | 637, 1098 |
| BstV1I | GCAGC | 6 cut(s) | 21, 45, 294, 441, 463, 636 |
| BstX2I | RGATCY | 2 cut(s) | 202, 820 |
| BstYI | RGATCY | 2 cut(s) | 202, 820 |
| BsuRI | GGCC | 5 cut(s) | 74, 164, 464, 603, 1055 |
| BtsCI | GGATG | 2 cut(s) | 657, 928 |
| BtsI | GCAGTG | 2 cut(s) | 236, 1079 |
| BtsIMutI | CAGTG | 6 cut(s) | 236, 329, 442, 936, 1079, 1120 |
| CaiI | CAGNNNCTG | 1 cut(s) | 695 |
| CfoI | GCGC | 2 cut(s) | 43, 254 |
| Cfr10I | RCCGGY | 1 cut(s) | 497 |
| Cfr13I | GGNCC | 2 cut(s) | 462, 743 |
| CseI | GACGC | 2 cut(s) | 149, 357 |
| Csp6I | GTAC | 1 cut(s) | 415 |
| CspAI | ACCGGT | 1 cut(s) | 497 |
| CviAII | CATG | 5 cut(s) | 430, 847, 859, 1030, 1061 |
| CviQI | GTAC | 1 cut(s) | 415 |
| DdeI | CTNAG | 7 cut(s) | 37, 188, 293, 321, 458, 466, 780 |
| DpnI | GATC | 8 cut(s) | 25, 91, 204, 725, 822, 872, 1035, 1091 |
| DpnII | GATC | 8 cut(s) | 23, 89, 202, 723, 820, 870, 1033, 1089 |
| EaeI | YGGCCR | 2 cut(s) | 72, 1053 |
| Eam1104I | CTCTTC | 4 cut(s) | 87, 124, 945, 950 |
| EarI | CTCTTC | 4 cut(s) | 87, 124, 945, 950 |
| Eco130I | CCWWGG | 1 cut(s) | 165 |
| Eco147I | AGGCCT | 1 cut(s) | 603 |
| Eco24I | GRGCYC | 1 cut(s) | 299 |
| Eco47I | GGWCC | 1 cut(s) | 743 |
| Eco47III | AGCGCT | 1 cut(s) | 253 |
| Eco72I | CACGTG | 1 cut(s) | 367 |
| EcoO109I | RGGNCCY | 1 cut(s) | 462 |
| EcoT14I | CCWWGG | 1 cut(s) | 165 |
| EcoT22I | ATGCAT | 3 cut(s) | 679, 852, 860 |
| EcoT38I | GRGCYC | 1 cut(s) | 299 |
| ErhI | CCWWGG | 1 cut(s) | 165 |
| FaeI | CATG | 5 cut(s) | 433, 850, 862, 1033, 1064 |
| FaqI | GGGAC | 1 cut(s) | 729 |
| FatI | CATG | 5 cut(s) | 429, 846, 858, 1029, 1060 |
| Fnu4HI | GCNGC | 7 cut(s) | 10, 44, 59, 308, 452, 455, 625 |
| FokI | GGATG | 2 cut(s) | 664, 935 |
| FriOI | GRGCYC | 1 cut(s) | 299 |
| Fsp4HI | GCNGC | 7 cut(s) | 10, 44, 59, 308, 452, 455, 625 |
| FspBI | CTAG | 1 cut(s) | 519 |
| GlaI | GCGC | 2 cut(s) | 42, 253 |
| GluI | GCNGC | 7 cut(s) | 10, 44, 59, 308, 452, 455, 625 |
| GsaI | CCCAGC | 1 cut(s) | 412 |
| HaeII | RGCGCY | 2 cut(s) | 44, 255 |
| HaeIII | GGCC | 5 cut(s) | 74, 164, 464, 603, 1055 |
| HapII | CCGG | 5 cut(s) | 47, 196, 311, 498, 506 |
| HgaI | GACGC | 2 cut(s) | 149, 357 |
| HhaI | GCGC | 2 cut(s) | 43, 254 |
| Hin1I | GRCGYC | 2 cut(s) | 339, 349 |
| Hin1II | CATG | 5 cut(s) | 433, 850, 862, 1033, 1064 |
| Hin6I | GCGC | 2 cut(s) | 41, 252 |
| HinP1I | GCGC | 2 cut(s) | 41, 252 |
| HincII | GTYRAC | 1 cut(s) | 472 |
| HindII | GTYRAC | 1 cut(s) | 472 |
| HindIII | AAGCTT | 2 cut(s) | 95, 315 |
| HinfI | GANTC | 7 cut(s) | 53, 192, 330, 574, 692, 786, 1038 |
| HpaII | CCGG | 5 cut(s) | 47, 196, 311, 498, 506 |
| Hpy166II | GTNNAC | 2 cut(s) | 472, 764 |
| Hpy8I | GTNNAC | 2 cut(s) | 472, 764 |
| Hpy99I | CGWCG | 3 cut(s) | 143, 341, 351 |
| HpyAV | CCTTC | 4 cut(s) | 135, 154, 605, 920 |
| HpyCH4III | ACNGT | 3 cut(s) | 437, 705, 940 |
| HpyCH4IV | ACGT | 3 cut(s) | 339, 366, 760 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 221, 258, 770, 983 |
| HpyF3I | CTNAG | 7 cut(s) | 37, 188, 293, 321, 458, 466, 780 |
| HpySE526I | ACGT | 3 cut(s) | 339, 366, 760 |
| Hsp92I | GRCGYC | 2 cut(s) | 339, 349 |
| Hsp92II | CATG | 5 cut(s) | 433, 850, 862, 1033, 1064 |
| HspAI | GCGC | 2 cut(s) | 41, 252 |
| KpnI | GGTACC | 1 cut(s) | 418 |
| Kzo9I | GATC | 8 cut(s) | 23, 89, 202, 723, 820, 870, 1033, 1089 |
| LguI | GCTCTTC | 1 cut(s) | 950 |
| LmnI | GCTCC | 2 cut(s) | 169, 484 |
| Lsp1109I | GCAGC | 6 cut(s) | 21, 45, 294, 441, 463, 636 |
| LweI | GCATC | 6 cut(s) | 211, 686, 688, 823, 859, 971 |
| MaeI | CTAG | 1 cut(s) | 519 |
| MaeII | ACGT | 3 cut(s) | 339, 366, 760 |
| MaeIII | GTNAC | 2 cut(s) | 534, 1077 |
| MalI | GATC | 8 cut(s) | 25, 91, 204, 725, 822, 872, 1035, 1091 |
| MbiI | CCGCTC | 1 cut(s) | 172 |
| MboI | GATC | 8 cut(s) | 23, 89, 202, 723, 820, 870, 1033, 1089 |
| MflI | RGATCY | 2 cut(s) | 202, 820 |
| MhlI | GDGCHC | 3 cut(s) | 299, 766, 945 |
| MlsI | TGGCCA | 2 cut(s) | 74, 1055 |
| MluCI | AATT | 5 cut(s) | 280, 529, 615, 805, 1101 |
| MluI | ACGCGT | 1 cut(s) | 635 |
| MluNI | TGGCCA | 2 cut(s) | 74, 1055 |
| MlyI | GAGTC | 5 cut(s) | 62, 186, 686, 795, 1047 |
| MmeI | TCCRAC | 2 cut(s) | 162, 733 |
| MnlI | CCTC | 4 cut(s) | 475, 508, 614, 671 |
| Mox20I | TGGCCA | 2 cut(s) | 74, 1055 |
| Mph1103I | ATGCAT | 3 cut(s) | 679, 852, 860 |
| MscI | TGGCCA | 2 cut(s) | 74, 1055 |
| MseI | TTAA | 1 cut(s) | 629 |
| MslI | CAYNNNNRTG | 2 cut(s) | 365, 638 |
| Msp20I | TGGCCA | 2 cut(s) | 74, 1055 |
| MspA1I | CMGCKG | 2 cut(s) | 412, 454 |
| MspI | CCGG | 5 cut(s) | 47, 196, 311, 498, 506 |
| MvnI | CGCG | 2 cut(s) | 637, 1098 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 221, 258, 770, 983 |
| NdeII | GATC | 8 cut(s) | 23, 89, 202, 723, 820, 870, 1033, 1089 |
| NlaIII | CATG | 5 cut(s) | 433, 850, 862, 1033, 1064 |
| NlaIV | GGNNCC | 2 cut(s) | 416, 745 |
| NmuCI | GTSAC | 2 cut(s) | 534, 1077 |
| NsiI | ATGCAT | 3 cut(s) | 679, 852, 860 |
| NspI | RCATGY | 3 cut(s) | 850, 862, 1064 |
| NspV | TTCGAA | 1 cut(s) | 948 |
| OliI | CACNNNNGTG | 1 cut(s) | 365 |
| PceI | AGGCCT | 1 cut(s) | 603 |
| PciSI | GCTCTTC | 1 cut(s) | 950 |
| PfeI | GAWTC | 2 cut(s) | 330, 574 |
| PinAI | ACCGGT | 1 cut(s) | 497 |
| PkrI | GCNGC | 7 cut(s) | 11, 45, 60, 309, 453, 456, 626 |
| Ple19I | CGATCG | 1 cut(s) | 26 |
| PleI | GAGTC | 5 cut(s) | 61, 186, 686, 794, 1046 |
| PmaCI | CACGTG | 1 cut(s) | 367 |
| PmlI | CACGTG | 1 cut(s) | 367 |
| PpsI | GAGTC | 5 cut(s) | 61, 186, 686, 794, 1046 |
| Ppu21I | YACGTR | 1 cut(s) | 367 |
| PspCI | CACGTG | 1 cut(s) | 367 |
| PspFI | CCCAGC | 1 cut(s) | 408 |
| PspN4I | GGNNCC | 2 cut(s) | 416, 745 |
| PspPI | GGNCC | 2 cut(s) | 462, 743 |
| PstI | CTGCAG | 1 cut(s) | 1086 |
| PstNI | CAGNNNCTG | 1 cut(s) | 695 |
| PsuI | RGATCY | 2 cut(s) | 202, 820 |
| PvuI | CGATCG | 1 cut(s) | 26 |
| PvuII | CAGCTG | 1 cut(s) | 454 |
| RsaI | GTAC | 1 cut(s) | 416 |
| RsaNI | GTAC | 1 cut(s) | 415 |
| RseI | CAYNNNNRTG | 2 cut(s) | 365, 638 |
| SapI | GCTCTTC | 1 cut(s) | 950 |
| SaqAI | TTAA | 1 cut(s) | 629 |
| SatI | GCNGC | 7 cut(s) | 10, 44, 59, 308, 452, 455, 625 |
| Sau3AI | GATC | 8 cut(s) | 23, 89, 202, 723, 820, 870, 1033, 1089 |
| Sau96I | GGNCC | 2 cut(s) | 462, 743 |
| SchI | GAGTC | 5 cut(s) | 62, 186, 686, 795, 1047 |
| SduI | GDGCHC | 3 cut(s) | 299, 766, 945 |
| SfaNI | GCATC | 6 cut(s) | 211, 686, 688, 823, 859, 971 |
| SfcI | CTRYAG | 1 cut(s) | 1082 |
| SfuI | TTCGAA | 1 cut(s) | 948 |
| SinI | GGWCC | 1 cut(s) | 743 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 365, 638 |
| Sse9I | AATT | 5 cut(s) | 280, 529, 615, 805, 1101 |
| SseBI | AGGCCT | 1 cut(s) | 603 |
| SsiI | CCGC | 8 cut(s) | 44, 68, 157, 172, 245, 399, 412, 545 |
| SspMI | CTAG | 1 cut(s) | 519 |
| StuI | AGGCCT | 1 cut(s) | 603 |
| StyI | CCWWGG | 1 cut(s) | 165 |
| TaaI | ACNGT | 3 cut(s) | 437, 705, 940 |
| TaiI | ACGT | 3 cut(s) | 342, 369, 763 |
| TaqI | TCGA | 3 cut(s) | 276, 948, 1036 |
| TasI | AATT | 5 cut(s) | 280, 529, 615, 805, 1101 |
| TauI | GCSGC | 1 cut(s) | 46 |
| TfiI | GAWTC | 2 cut(s) | 330, 574 |
| Tru1I | TTAA | 1 cut(s) | 629 |
| Tru9I | TTAA | 1 cut(s) | 629 |
| TscAI | CASTG | 5 cut(s) | 236, 329, 442, 943, 1086 |
| TseFI | GTSAC | 2 cut(s) | 534, 1077 |
| TseI | GCWGC | 6 cut(s) | 9, 58, 307, 451, 454, 624 |
| Tsp45I | GTSAC | 2 cut(s) | 534, 1077 |
| TspDTI | ATGAA | 5 cut(s) | 446, 459, 555, 853, 939 |
| TspGWI | ACGGA | 1 cut(s) | 813 |
| TspRI | CASTG | 5 cut(s) | 236, 329, 442, 943, 1086 |
| VneI | GTGCAC | 1 cut(s) | 762 |
| VpaK11BI | GGWCC | 1 cut(s) | 743 |
| XapI | RAATTY | 2 cut(s) | 805, 1101 |
| XceI | RCATGY | 3 cut(s) | 850, 862, 1064 |
| XspI | CTAG | 1 cut(s) | 519 |
| ZraI | GACGTC | 1 cut(s) | 340 |
| Zsp2I | ATGCAT | 3 cut(s) | 679, 852, 860 |