Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007953

Physical Location & Seq

Genomic Coordinates Forward (+)

22030537 .. 22033800

Gene Structure 3264 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G267200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 942 bp

ATGATGCCCAGATGCTCTGTTCAATCGAATGATGTTCAGCTCTTCCAGAGCTTAACTGGGCTTCAACAGCTTGCAGAAACCCACCGTTTCAAGGCCTGGTTCTTAGATCAGTTTGGAGTCCTCCATGACGGGAAGCAGCCTTATCCTGGTGCAATCACAACATTAAAAAACCTAGCAAGTACTGGTGCAAAAATGGTAATTATAAGTAATTCCTCAAGACGCTCGTCTACAACCATGGAGAAATTGAGAAGCCTTGGGTTTGATCCTTCTCTATTTGTCGGAGCCATCACGAGTGGAGAATTAACACATCAGAACTTGCAAAGGAGAGATGATGCTTGGTTTGCAGCACTGGGAAAATCTTGCATTCATATGACTTGGAGTGCTCGTGGTGCCATATCTCTTGAGGGCCTGGGATTGCAAGTTGTGGAGAATGTTCAGGATGCTGAATTTATTTTGGTCCATGGTACCGAGGCCTTAGGGCTTCCTTCTGGTGATGCGCTTCCCATGAAACTTGAGGAACTGGAAAGTATATTGGAACAATGTGCTGCTAAACACATCCCTATGGTGGTAGCCAATCCAGATTTTGTGACTGTTGAGGCTAGAGCCTTGCGTGTAATGCCTGGGACTCTGGCTGCCAGGTATGAAAAGCTGGGGGGTGAAGTGAAATGGATGGGCAAGCCTGATAAGGTCATCTACAAATCAGCAATGGCGTTAGCTGGTGTAGACCCTGTTGATTCTATAGCAGTGGGTGATTCTCTTCACCATGACATTAAGGGTGCAAATGCAGCTATAATCCAATCAGTTTTTATCACAGCTGGGATCCATGCAACTGAACTTGGACTCAGTAGTTTTGGAGACATTGCGGATATATCTTCTGTGCAAGCTCTTGCTTCCAAATACGATGCTTACCCATCATACGTGTTACCTGCGTTTACATGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAD_2 Hydrolase_6 Hydrolase_like

Protein Analysis

314

Amino Acids

33.77

Weight (kDa)

5.84

Isoelectric Point (pI)

38.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007953)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10460
fragaria_vesca	FvH4_1g00490 FvH4_1g00490 FvH4_1g00490 FvH4_1g00490 FvH4_1g00490 FvH4_1g00490
malus_domestica	MD15G1148400.v1.1
prunus_persica	Prupe.7G267200_v2.0.a1 Prupe.7G267200_v2.0.a1 Prupe.7G267200_v2.0.a1
pyrus_communis	pycom15g13270
rosa_chinensis	RchiOBHm_Chr2g0085091
rosa_laevigata	RLG00000015655
rosa_multiflora	Rmu_sc0008647.1_g000015 Rmu_sc0008647.1_g000017
rosa_roxburghii	Rroxscaffold_2G00155640
rosa_rugosa	Rorug01G0457600 Rorug01G0457700
rosa_samantha	Rh2AG005900 Rh2BG006600 Rh2CG007300 Rh2DG007400
rosa_wichuraiana	Rw2G000540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	203
Acc36I	ACCTGC	1 cut(s)	934
Acc65I	GGTACC	1 cut(s)	464
AccB1I	GGYRCC	2 cut(s)	389, 464
AccI	GTMKAC	2 cut(s)	227, 723
AciI	CCGC	1 cut(s)	863
AclWI	GGATC	3 cut(s)	257, 814, 827
AcsI	RAATTY	1 cut(s)	446
AfaI	GTAC	2 cut(s)	181, 466
AfiI	CCNNNNNNNGG	3 cut(s)	91, 146, 565
AflIII	ACRYGT	1 cut(s)	918
AgsI	TTSAA	3 cut(s)	23, 65, 91
AjnI	CCWGG	5 cut(s)	95, 145, 408, 619, 635
AluBI	AGCT	8 cut(s)	40, 51, 70, 649, 716, 788, 815, 884
AluI	AGCT	8 cut(s)	40, 51, 70, 649, 716, 788, 815, 884
Alw21I	GWGCWC	1 cut(s)	385
Alw26I	GTCTC	1 cut(s)	849
AlwI	GGATC	3 cut(s)	257, 814, 827
AoxI	GGCC	3 cut(s)	93, 406, 471
ApeKI	GCWGC	5 cut(s)	136, 344, 545, 632, 785
ApoI	RAATTY	1 cut(s)	446
Asp718I	GGTACC	1 cut(s)	464
AspLEI	GCGC	1 cut(s)	499
AspS9I	GGNCC	2 cut(s)	406, 457
AsuHPI	GGTGA	4 cut(s)	503, 668, 752, 761
AvaII	GGWCC	1 cut(s)	457
AxyI	CCTNAGG	1 cut(s)	475
BamHI	GGATCC	1 cut(s)	819
BanI	GGYRCC	2 cut(s)	389, 464
BauI	CACGAG	2 cut(s)	289, 384
Bbv12I	GWGCWC	1 cut(s)	385
BbvI	GCAGC	5 cut(s)	148, 356, 532, 619, 797
BccI	CCATC	3 cut(s)	293, 664, 919
BciT130I	CCWGG	5 cut(s)	97, 147, 410, 621, 637
BcoDI	GTCTC	1 cut(s)	849
BfaI	CTAG	2 cut(s)	173, 600
BfmI	CTRYAG	1 cut(s)	738
BfuAI	ACCTGC	1 cut(s)	934
BisI	GCNGC	5 cut(s)	137, 345, 546, 633, 786
BlsI	GCNGC	5 cut(s)	138, 346, 547, 634, 787
BmcAI	AGTACT	1 cut(s)	181
Bme1390I	CCNGG	5 cut(s)	97, 147, 410, 621, 637
Bme18I	GGWCC	1 cut(s)	457
BmgT120I	GGNCC	2 cut(s)	406, 457
BmiI	GGNNCC	4 cut(s)	283, 391, 466, 821
BmrFI	CCNGG	5 cut(s)	97, 147, 410, 621, 637
BmrI	ACTGGG	2 cut(s)	66, 359
BmsI	GCATC	5 cut(s)	2, 322, 430, 484, 892
BmuI	ACTGGG	2 cut(s)	66, 359
BoxI	GACNNNNGTC	1 cut(s)	223
BpuEI	CTTGAG	3 cut(s)	199, 422, 533
BsaAI	YACGTR	1 cut(s)	919
BsaJI	CCNNGG	6 cut(s)	234, 253, 409, 460, 468, 620
BsaXI	ACNNNNNCTCC	2 cut(s)	370, 400
Bsc4I	CCNNNNNNNGG	3 cut(s)	91, 146, 565
Bse1I	ACTGG	4 cut(s)	61, 187, 354, 525
Bse21I	CCTNAGG	1 cut(s)	475
Bse3DI	GCAATG	2 cut(s)	711, 858
BseBI	CCWGG	5 cut(s)	97, 147, 410, 621, 637
BseDI	CCNNGG	6 cut(s)	234, 253, 409, 460, 468, 620
BseGI	GGATG	3 cut(s)	445, 555, 675
BseLI	CCNNNNNNNGG	3 cut(s)	91, 146, 565
BseMI	GCAATG	2 cut(s)	711, 858
BseMII	CTCAG	1 cut(s)	856
BseNI	ACTGG	4 cut(s)	61, 187, 354, 525
BseXI	GCAGC	5 cut(s)	148, 356, 532, 619, 797
BseYI	CCCAGC	2 cut(s)	649, 815
BshFI	GGCC	3 cut(s)	95, 408, 473
BshNI	GGYRCC	2 cut(s)	389, 464
BsiHKAI	GWGCWC	1 cut(s)	385
BslFI	GGGAC	1 cut(s)	637
BslI	CCNNNNNNNGG	3 cut(s)	91, 146, 565
BsmAI	GTCTC	1 cut(s)	849
BsmFI	GGGAC	1 cut(s)	637
BsmI	GAATGC	1 cut(s)	363
BsnI	GGCC	3 cut(s)	95, 408, 473
Bsp1286I	GDGCHC	1 cut(s)	385
Bsp143I	GATC	3 cut(s)	106, 262, 819
Bsp19I	CCATGG	2 cut(s)	234, 460
BspACI	CCGC	1 cut(s)	863
BspANI	GGCC	3 cut(s)	95, 408, 473
BspCNI	CTCAG	1 cut(s)	855
BspLI	GGNNCC	4 cut(s)	283, 391, 466, 821
BspMI	ACCTGC	1 cut(s)	934
BspPI	GGATC	3 cut(s)	257, 814, 827
BspQI	GCTCTTC	1 cut(s)	47
BspT107I	GGYRCC	2 cut(s)	389, 464
BsrDI	GCAATG	2 cut(s)	711, 858
BsrI	ACTGG	4 cut(s)	61, 187, 354, 525
BssECI	CCNNGG	6 cut(s)	234, 253, 409, 460, 468, 620
BssMI	GATC	3 cut(s)	106, 262, 819
BssSI	CACGAG	2 cut(s)	289, 384
BssT1I	CCWWGG	3 cut(s)	234, 253, 460
Bst2BI	CACGAG	2 cut(s)	289, 384
Bst2UI	CCWGG	5 cut(s)	97, 147, 410, 621, 637
Bst4CI	ACNGT	2 cut(s)	86, 592
Bst6I	CTCTTC	2 cut(s)	47, 762
BstBAI	YACGTR	1 cut(s)	919
BstC8I	GCNNGC	3 cut(s)	72, 677, 882
BstDEI	CTNAG	3 cut(s)	103, 475, 842
BstDSI	CCRYGG	2 cut(s)	234, 460
BstF5I	GGATG	3 cut(s)	445, 555, 675
BstHHI	GCGC	1 cut(s)	499
BstKTI	GATC	3 cut(s)	109, 265, 822
BstMAI	GTCTC	1 cut(s)	849
BstMBI	GATC	3 cut(s)	106, 262, 819
BstMWI	GCNNNNNNNGC	5 cut(s)	67, 341, 389, 616, 785
BstNI	CCWGG	5 cut(s)	97, 147, 410, 621, 637
BstPAI	GACNNNNGTC	1 cut(s)	223
BstSCI	CCNGG	5 cut(s)	95, 145, 408, 619, 635
BstSFI	CTRYAG	1 cut(s)	738
BstV1I	GCAGC	5 cut(s)	148, 356, 532, 619, 797
BstX2I	RGATCY	1 cut(s)	819
BstYI	RGATCY	1 cut(s)	819
Bsu36I	CCTNAGG	1 cut(s)	475
BsuRI	GGCC	3 cut(s)	95, 408, 473
BtgI	CCRYGG	2 cut(s)	234, 460
BtsCI	GGATG	3 cut(s)	445, 555, 675
BtsI	GCAGTG	1 cut(s)	750
BtsIMutI	CAGTG	2 cut(s)	347, 750
BveI	ACCTGC	1 cut(s)	934
Cac8I	GCNNGC	3 cut(s)	72, 677, 882
CfoI	GCGC	1 cut(s)	499
Cfr13I	GGNCC	2 cut(s)	406, 457
CseI	GACGC	1 cut(s)	228
Csp6I	GTAC	2 cut(s)	180, 465
CviAII	CATG	7 cut(s)	125, 235, 461, 505, 764, 824, 936
CviQI	GTAC	2 cut(s)	180, 465
DdeI	CTNAG	3 cut(s)	103, 475, 842
DpnI	GATC	3 cut(s)	108, 264, 821
DpnII	GATC	3 cut(s)	106, 262, 819
Eam1104I	CTCTTC	2 cut(s)	47, 762
EarI	CTCTTC	2 cut(s)	47, 762
Eco130I	CCWWGG	3 cut(s)	234, 253, 460
Eco147I	AGGCCT	2 cut(s)	95, 473
Eco47I	GGWCC	1 cut(s)	457
Eco81I	CCTNAGG	1 cut(s)	475
EcoO109I	RGGNCCY	1 cut(s)	406
EcoRII	CCWGG	5 cut(s)	95, 145, 408, 619, 635
EcoT14I	CCWWGG	3 cut(s)	234, 253, 460
ErhI	CCWWGG	3 cut(s)	234, 253, 460
FaeI	CATG	7 cut(s)	128, 238, 464, 508, 767, 827, 939
FaqI	GGGAC	1 cut(s)	637
FatI	CATG	7 cut(s)	124, 234, 460, 504, 763, 823, 935
FauNDI	CATATG	1 cut(s)	369
FblI	GTMKAC	2 cut(s)	227, 723
Fnu4HI	GCNGC	5 cut(s)	137, 345, 546, 633, 786
FokI	GGATG	3 cut(s)	452, 542, 682
Fsp4HI	GCNGC	5 cut(s)	137, 345, 546, 633, 786
FspBI	CTAG	2 cut(s)	173, 600
GlaI	GCGC	1 cut(s)	498
GluI	GCNGC	5 cut(s)	137, 345, 546, 633, 786
GsaI	CCCAGC	2 cut(s)	653, 819
HaeIII	GGCC	3 cut(s)	95, 408, 473
HgaI	GACGC	1 cut(s)	228
HhaI	GCGC	1 cut(s)	499
Hin1II	CATG	7 cut(s)	128, 238, 464, 508, 767, 827, 939
Hin6I	GCGC	1 cut(s)	497
HinP1I	GCGC	1 cut(s)	497
HinfI	GANTC	5 cut(s)	117, 625, 734, 752, 840
HphI	GGTGA	4 cut(s)	503, 668, 752, 761
Hpy166II	GTNNAC	3 cut(s)	228, 724, 933
Hpy188I	TCNGA	2 cut(s)	281, 312
Hpy188III	TCNNGA	6 cut(s)	46, 216, 289, 401, 437, 578
Hpy8I	GTNNAC	3 cut(s)	228, 724, 933
HpyAV	CCTTC	2 cut(s)	276, 495
HpyCH4III	ACNGT	2 cut(s)	86, 592
HpyCH4IV	ACGT	1 cut(s)	918
HpyF10VI	GCNNNNNNNGC	5 cut(s)	67, 341, 389, 616, 785
HpyF3I	CTNAG	3 cut(s)	103, 475, 842
HpySE526I	ACGT	1 cut(s)	918
Hsp92II	CATG	7 cut(s)	128, 238, 464, 508, 767, 827, 939
HspAI	GCGC	1 cut(s)	497
KpnI	GGTACC	1 cut(s)	468
Kzo9I	GATC	3 cut(s)	106, 262, 819
LguI	GCTCTTC	1 cut(s)	47
LmnI	GCTCC	1 cut(s)	281
Lsp1109I	GCAGC	5 cut(s)	148, 356, 532, 619, 797
LweI	GCATC	5 cut(s)	2, 322, 430, 484, 892
MaeI	CTAG	2 cut(s)	173, 600
MaeII	ACGT	1 cut(s)	918
MaeIII	GTNAC	2 cut(s)	586, 921
MalI	GATC	3 cut(s)	108, 264, 821
MboI	GATC	3 cut(s)	106, 262, 819
MboII	GAAGA	3 cut(s)	34, 749, 864
MflI	RGATCY	1 cut(s)	819
MhlI	GDGCHC	1 cut(s)	385
MluCI	AATT	5 cut(s)	198, 208, 242, 299, 446
MlyI	GAGTC	3 cut(s)	126, 619, 834
MmeI	TCCRAC	1 cut(s)	259
MnlI	CCTC	6 cut(s)	131, 223, 397, 463, 508, 589
MseI	TTAA	4 cut(s)	53, 164, 302, 771
MslI	CAYNNNNRTG	2 cut(s)	368, 560
MspA1I	CMGCKG	1 cut(s)	815
MspR9I	CCNGG	5 cut(s)	97, 147, 410, 621, 637
Mva1269I	GAATGC	1 cut(s)	363
MvaI	CCWGG	5 cut(s)	97, 147, 410, 621, 637
MwoI	GCNNNNNNNGC	5 cut(s)	67, 341, 389, 616, 785
NcoI	CCATGG	2 cut(s)	234, 460
NdeI	CATATG	1 cut(s)	369
NdeII	GATC	3 cut(s)	106, 262, 819
NlaIII	CATG	7 cut(s)	128, 238, 464, 508, 767, 827, 939
NlaIV	GGNNCC	4 cut(s)	283, 391, 466, 821
NmuCI	GTSAC	1 cut(s)	586
PceI	AGGCCT	2 cut(s)	95, 473
PciSI	GCTCTTC	1 cut(s)	47
PctI	GAATGC	1 cut(s)	363
PfeI	GAWTC	2 cut(s)	734, 752
PkrI	GCNGC	5 cut(s)	138, 346, 547, 634, 787
PleI	GAGTC	3 cut(s)	125, 619, 834
PpsI	GAGTC	3 cut(s)	125, 619, 834
Ppu21I	YACGTR	1 cut(s)	919
PshAI	GACNNNNGTC	1 cut(s)	223
PsiI	TTATAA	1 cut(s)	203
Psp6I	CCWGG	5 cut(s)	95, 145, 408, 619, 635
PspFI	CCCAGC	2 cut(s)	649, 815
PspGI	CCWGG	5 cut(s)	95, 145, 408, 619, 635
PspN4I	GGNNCC	4 cut(s)	283, 391, 466, 821
PspPI	GGNCC	2 cut(s)	406, 457
PsuI	RGATCY	1 cut(s)	819
PvuII	CAGCTG	1 cut(s)	815
RsaI	GTAC	2 cut(s)	181, 466
RsaNI	GTAC	2 cut(s)	180, 465
RseI	CAYNNNNRTG	2 cut(s)	368, 560
SapI	GCTCTTC	1 cut(s)	47
SaqAI	TTAA	4 cut(s)	53, 164, 302, 771
SatI	GCNGC	5 cut(s)	137, 345, 546, 633, 786
Sau3AI	GATC	3 cut(s)	106, 262, 819
Sau96I	GGNCC	2 cut(s)	406, 457
ScaI	AGTACT	1 cut(s)	181
SchI	GAGTC	3 cut(s)	126, 619, 834
ScrFI	CCNGG	5 cut(s)	97, 147, 410, 621, 637
SduI	GDGCHC	1 cut(s)	385
SfaNI	GCATC	5 cut(s)	2, 322, 430, 484, 892
SfcI	CTRYAG	1 cut(s)	738
SinI	GGWCC	1 cut(s)	457
SmiMI	CAYNNNNRTG	2 cut(s)	368, 560
SmlI	CTYRAG	3 cut(s)	214, 401, 512
SmoI	CTYRAG	3 cut(s)	214, 401, 512
Sse9I	AATT	5 cut(s)	198, 208, 242, 299, 446
SseBI	AGGCCT	2 cut(s)	95, 473
SsiI	CCGC	1 cut(s)	863
SspMI	CTAG	2 cut(s)	173, 600
StuI	AGGCCT	2 cut(s)	95, 473
StyD4I	CCNGG	5 cut(s)	95, 145, 408, 619, 635
StyI	CCWWGG	3 cut(s)	234, 253, 460
TaaI	ACNGT	2 cut(s)	86, 592
TaiI	ACGT	1 cut(s)	921
TaqI	TCGA	1 cut(s)	26
TasI	AATT	5 cut(s)	198, 208, 242, 299, 446
TatI	WGTACW	1 cut(s)	179
TfiI	GAWTC	2 cut(s)	734, 752
Tru1I	TTAA	4 cut(s)	53, 164, 302, 771
Tru9I	TTAA	4 cut(s)	53, 164, 302, 771
TscAI	CASTG	2 cut(s)	354, 750
TseFI	GTSAC	1 cut(s)	586
TseI	GCWGC	5 cut(s)	136, 344, 545, 632, 785
Tsp45I	GTSAC	1 cut(s)	586
TspDTI	ATGAA	3 cut(s)	356, 521, 657
TspRI	CASTG	2 cut(s)	354, 750
VpaK11BI	GGWCC	1 cut(s)	457
XapI	RAATTY	1 cut(s)	446
XcmI	CCANNNNNNNNNTGG	1 cut(s)	53
XmiI	GTMKAC	2 cut(s)	227, 723
XspI	CTAG	2 cut(s)	173, 600
ZrmI	AGTACT	1 cut(s)	181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.