Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0005015

Physical Location & Seq

Genomic Coordinates Reverse (-)

22141140 .. 22144410

Gene Structure 3271 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G269600.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 726 bp

ATGATGAGGAAAGAAGACCCCCGCCCCCCCAAGATTATCGAAGCACAGAGCATTTCCATACGATCTCACCACAACCCTCCTGCCGTTGATAAGCTTCAACAACTCCTGTCTACAGGTGGTGGTGGTTCTGGTTGGGACAAGTGCTGGGAGCAAGGTTTGACCCCTTGGGATTTAGGACAGCCAACGCCAGTGATTGCGCATCTTCATCGTCAGGGTGCCCTTCCCAAGGGCAGGGCTCTTGTCCCTGGTTGTGGCACTGGTTATGATGTTGTGGCAATTGCATCCCCCGAACGCCATGTCACTGGATTGGACATTTCAGAGAATGCCATTAAGAAAGCAGCCGAGTTGTTTTCCTCACTTCCCGAAGCACGCTATTATAGCTTCTTAAAGGTGGACTTTTTCACTTGGCATCCAACTGAATTGTTTGATCTCATTTTTGATTATACGTTCTTCTGTGCTGTTGAACCAGAGATGAGATCAGTGTGGGCACGAAAGATTCGAGATATTTTAAAACCAGATGGGGAGCTCATAACACTAATGTTTCCTATCAGTGATCATATTGGTGGACCCCCTTACAAAGTGTCAATTTCAGATTATGAAGAGGTGTTGCATCCCATGGGCTTTAAGGCAACCTCTATCGTAGACAATGAACTAGCTGTTCCCCCTCGCAAGGGAAGAGAAAAGCTTGGAAGGTGGAAGAGATCTCTAAGCGAATCCTCTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006082 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008168 GO:0008172 GO:0008757 GO:0009056 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0016020 GO:0016143 GO:0016145 GO:0016740 GO:0016741 GO:0018708 GO:0019748 GO:0019757 GO:0019759 GO:0019760 GO:0019762 GO:0031967 GO:0031975 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044248 GO:0044273 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0071704 GO:0071944 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575 GO:1901657 GO:1901658

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPMT

Protein Analysis

242

Amino Acids

26.99

Weight (kDa)

6.71

Isoelectric Point (pI)

44.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005015)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43910 AT2G43910 AT2G43910 AT2G43920 AT2G43920 AT2G43920 AT2G43920 AT2G43920 AT2G43920 AT2G43940
fragaria_vesca	FvH4_1g00240 FvH4_1g00240 FvH4_1g00240
malus_domestica	MD15G1143500.v1.1
prunus_persica	Prupe.7G269600_v2.0.a1 Prupe.7G269600_v2.0.a1 Prupe.7G269600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0084541
rosa_laevigata	RLG00000015625
rosa_multiflora	Rmu_sc0009647.1_g000002
rosa_roxburghii	Rroxscaffold_2G00155980
rosa_rugosa	Rorug01G0454800 Rorug01G0454900 Rorug01G0455000 Rorug01G0455100
rosa_samantha	Rh2AG002900 Rh2BG002500 Rh2CG003000 Rh2DG003000
rosa_wichuraiana	Rw2G000260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	198
AccB1I	GGYRCC	1 cut(s)	215
AccI	GTMKAC	2 cut(s)	110, 642
AciI	CCGC	1 cut(s)	22
AfiI	CCNNNNNNNGG	5 cut(s)	226, 231, 251, 670, 671
AgsI	TTSAA	2 cut(s)	98, 464
AjnI	CCWGG	1 cut(s)	244
AluBI	AGCT	5 cut(s)	94, 381, 526, 656, 685
AluI	AGCT	5 cut(s)	94, 381, 526, 656, 685
Alw21I	GWGCWC	1 cut(s)	528
ApeKI	GCWGC	1 cut(s)	338
ArsI	GACNNNNNNTTYG	2 cut(s)	282, 314
AspLEI	GCGC	1 cut(s)	199
AspS9I	GGNCC	1 cut(s)	566
AsuHPI	GGTGA	1 cut(s)	59
AvaII	GGWCC	1 cut(s)	566
BaeGI	GKGCMC	2 cut(s)	220, 490
BanI	GGYRCC	1 cut(s)	215
BanII	GRGCYC	2 cut(s)	238, 528
BbsI	GAAGAC	1 cut(s)	21
Bbv12I	GWGCWC	1 cut(s)	528
BbvI	GCAGC	1 cut(s)	350
BccI	CCATC	1 cut(s)	512
BceAI	ACGGC	1 cut(s)	68
BcgI	CGANNNNNNTGC	2 cut(s)	188, 222
BciT130I	CCWGG	1 cut(s)	246
BclI	TGATCA	1 cut(s)	553
BfaI	CTAG	1 cut(s)	653
BfmI	CTRYAG	1 cut(s)	111
BglII	AGATCT	1 cut(s)	701
BisI	GCNGC	1 cut(s)	339
BlsI	GCNGC	1 cut(s)	340
Bme1390I	CCNGG	1 cut(s)	246
Bme18I	GGWCC	1 cut(s)	566
BmgT120I	GGNCC	1 cut(s)	566
BmiI	GGNNCC	2 cut(s)	217, 568
BmrFI	CCNGG	1 cut(s)	246
BmsI	GCATC	4 cut(s)	208, 290, 418, 619
BpiI	GAAGAC	1 cut(s)	21
BsaJI	CCNNGG	4 cut(s)	164, 225, 244, 615
Bsc4I	CCNNNNNNNGG	5 cut(s)	226, 231, 251, 670, 671
Bse1I	ACTGG	3 cut(s)	188, 262, 307
BseBI	CCWGG	1 cut(s)	246
BseDI	CCNNGG	4 cut(s)	164, 225, 244, 615
BseGI	GGATG	3 cut(s)	281, 409, 610
BseLI	CCNNNNNNNGG	5 cut(s)	226, 231, 251, 670, 671
BseNI	ACTGG	3 cut(s)	188, 262, 307
BseSI	GKGCMC	2 cut(s)	220, 490
BseXI	GCAGC	1 cut(s)	350
BseYI	CCCAGC	1 cut(s)	144
BshNI	GGYRCC	1 cut(s)	215
BsiHKAI	GWGCWC	1 cut(s)	528
BslFI	GGGAC	2 cut(s)	149, 227
BslI	CCNNNNNNNGG	5 cut(s)	226, 231, 251, 670, 671
BsmFI	GGGAC	2 cut(s)	149, 227
BsmI	GAATGC	1 cut(s)	328
Bsp1286I	GDGCHC	4 cut(s)	220, 238, 490, 528
Bsp143I	GATC	5 cut(s)	62, 427, 476, 553, 701
Bsp19I	CCATGG	1 cut(s)	615
BspACI	CCGC	1 cut(s)	22
BspLI	GGNNCC	2 cut(s)	217, 568
BspT107I	GGYRCC	1 cut(s)	215
BsrI	ACTGG	3 cut(s)	188, 262, 307
BssECI	CCNNGG	4 cut(s)	164, 225, 244, 615
BssMI	GATC	5 cut(s)	62, 427, 476, 553, 701
BssT1I	CCWWGG	3 cut(s)	164, 225, 615
Bst2UI	CCWGG	1 cut(s)	246
Bst6I	CTCTTC	3 cut(s)	594, 670, 692
BstC8I	GCNNGC	1 cut(s)	370
BstDEI	CTNAG	1 cut(s)	707
BstDSI	CCRYGG	1 cut(s)	615
BstENI	CCTNNNNNAGG	1 cut(s)	224
BstF5I	GGATG	3 cut(s)	281, 409, 610
BstHHI	GCGC	1 cut(s)	199
BstKTI	GATC	5 cut(s)	65, 430, 479, 556, 704
BstMBI	GATC	5 cut(s)	62, 427, 476, 553, 701
BstMWI	GCNNNNNNNGC	1 cut(s)	378
BstNI	CCWGG	1 cut(s)	246
BstSCI	CCNGG	1 cut(s)	244
BstSFI	CTRYAG	1 cut(s)	111
BstSLI	GKGCMC	2 cut(s)	220, 490
BstV1I	GCAGC	1 cut(s)	350
BstV2I	GAAGAC	1 cut(s)	21
BstX2I	RGATCY	1 cut(s)	701
BstXI	CCANNNNNNTGG	1 cut(s)	302
BstYI	RGATCY	1 cut(s)	701
BtgI	CCRYGG	1 cut(s)	615
BtsCI	GGATG	3 cut(s)	281, 409, 610
BtsIMutI	CAGTG	5 cut(s)	195, 255, 300, 486, 556
Cac8I	GCNNGC	1 cut(s)	370
CfoI	GCGC	1 cut(s)	199
Cfr13I	GGNCC	1 cut(s)	566
CviAII	CATG	2 cut(s)	296, 616
CviJI	RGCY	9 cut(s)	94, 181, 236, 341, 381, 526, 621, 656, 685
CviKI_1	RGCY	9 cut(s)	94, 181, 236, 341, 381, 526, 621, 656, 685
DdeI	CTNAG	1 cut(s)	707
DpnI	GATC	5 cut(s)	64, 429, 478, 555, 703
DpnII	GATC	5 cut(s)	62, 427, 476, 553, 701
DraI	TTTAAA	1 cut(s)	510
Eam1104I	CTCTTC	3 cut(s)	594, 670, 692
EarI	CTCTTC	3 cut(s)	594, 670, 692
Ecl136II	GAGCTC	1 cut(s)	526
Eco130I	CCWWGG	3 cut(s)	164, 225, 615
Eco24I	GRGCYC	2 cut(s)	238, 528
Eco47I	GGWCC	1 cut(s)	566
Eco53kI	GAGCTC	1 cut(s)	526
EcoICRI	GAGCTC	1 cut(s)	526
EcoNI	CCTNNNNNAGG	1 cut(s)	224
EcoRII	CCWGG	1 cut(s)	244
EcoT14I	CCWWGG	3 cut(s)	164, 225, 615
EcoT38I	GRGCYC	2 cut(s)	238, 528
ErhI	CCWWGG	3 cut(s)	164, 225, 615
FaeI	CATG	2 cut(s)	299, 619
FaiI	YATR	9 cut(s)	59, 264, 297, 378, 444, 530, 558, 597, 617
FalI	AAGNNNNNCTT	2 cut(s)	380, 412
FaqI	GGGAC	2 cut(s)	149, 227
FatI	CATG	2 cut(s)	295, 615
FauI	CCCGC	1 cut(s)	29
FbaI	TGATCA	1 cut(s)	553
FblI	GTMKAC	2 cut(s)	110, 642
Fnu4HI	GCNGC	1 cut(s)	339
FokI	GGATG	3 cut(s)	268, 396, 597
FriOI	GRGCYC	2 cut(s)	238, 528
Fsp4HI	GCNGC	1 cut(s)	339
FspBI	CTAG	1 cut(s)	653
FspI	TGCGCA	1 cut(s)	198
GlaI	GCGC	1 cut(s)	198
GluI	GCNGC	1 cut(s)	339
GsaI	CCCAGC	1 cut(s)	148
HhaI	GCGC	1 cut(s)	199
Hin1II	CATG	2 cut(s)	299, 619
Hin6I	GCGC	1 cut(s)	197
HinP1I	GCGC	1 cut(s)	197
HindIII	AAGCTT	2 cut(s)	92, 683
HinfI	GANTC	2 cut(s)	496, 713
HphI	GGTGA	1 cut(s)	59
Hpy166II	GTNNAC	4 cut(s)	111, 394, 566, 643
Hpy188I	TCNGA	3 cut(s)	319, 592, 725
Hpy188III	TCNNGA	2 cut(s)	362, 500
Hpy8I	GTNNAC	4 cut(s)	111, 394, 566, 643
HpyAV	CCTTC	2 cut(s)	230, 684
HpyCH4IV	ACGT	1 cut(s)	446
HpyCH4V	TGCA	2 cut(s)	281, 610
HpyF10VI	GCNNNNNNNGC	1 cut(s)	378
HpyF3I	CTNAG	1 cut(s)	707
HpySE526I	ACGT	1 cut(s)	446
Hsp92II	CATG	2 cut(s)	299, 619
HspAI	GCGC	1 cut(s)	197
Ksp22I	TGATCA	1 cut(s)	553
Kzo9I	GATC	5 cut(s)	62, 427, 476, 553, 701
LmnI	GCTCC	2 cut(s)	148, 523
Lsp1109I	GCAGC	1 cut(s)	350
LweI	GCATC	4 cut(s)	208, 290, 418, 619
MaeI	CTAG	1 cut(s)	653
MaeII	ACGT	1 cut(s)	446
MaeIII	GTNAC	1 cut(s)	298
MalI	GATC	5 cut(s)	64, 429, 478, 555, 703
MboI	GATC	5 cut(s)	62, 427, 476, 553, 701
MboII	GAAGA	6 cut(s)	26, 194, 442, 611, 687, 709
MfeI	CAATTG	1 cut(s)	276
MflI	RGATCY	1 cut(s)	701
MhlI	GDGCHC	4 cut(s)	220, 238, 490, 528
MluCI	AATT	3 cut(s)	276, 419, 585
MmeI	TCCRAC	1 cut(s)	437
MnlI	CCTC	5 cut(s)	87, 364, 595, 643, 675
MseI	TTAA	4 cut(s)	330, 386, 509, 624
MslI	CAYNNNNRTG	1 cut(s)	561
MspR9I	CCNGG	1 cut(s)	246
MunI	CAATTG	1 cut(s)	276
Mva1269I	GAATGC	1 cut(s)	328
MvaI	CCWGG	1 cut(s)	246
MwoI	GCNNNNNNNGC	1 cut(s)	378
NcoI	CCATGG	1 cut(s)	615
NdeII	GATC	5 cut(s)	62, 427, 476, 553, 701
NlaIII	CATG	2 cut(s)	299, 619
NlaIV	GGNNCC	2 cut(s)	217, 568
NmeAIII	GCCGAG	1 cut(s)	367
NmuCI	GTSAC	1 cut(s)	298
NsbI	TGCGCA	1 cut(s)	198
PcsI	WCGNNNNNNNCGW	1 cut(s)	496
PctI	GAATGC	1 cut(s)	328
PfeI	GAWTC	2 cut(s)	496, 713
PkrI	GCNGC	1 cut(s)	340
Psp124BI	GAGCTC	1 cut(s)	528
Psp6I	CCWGG	1 cut(s)	244
PspFI	CCCAGC	1 cut(s)	144
PspGI	CCWGG	1 cut(s)	244
PspN4I	GGNNCC	2 cut(s)	217, 568
PspPI	GGNCC	1 cut(s)	566
PsuI	RGATCY	1 cut(s)	701
RseI	CAYNNNNRTG	1 cut(s)	561
SacI	GAGCTC	1 cut(s)	528
SaqAI	TTAA	4 cut(s)	330, 386, 509, 624
SatI	GCNGC	1 cut(s)	339
Sau3AI	GATC	5 cut(s)	62, 427, 476, 553, 701
Sau96I	GGNCC	1 cut(s)	566
ScrFI	CCNGG	1 cut(s)	246
SduI	GDGCHC	4 cut(s)	220, 238, 490, 528
SfaNI	GCATC	4 cut(s)	208, 290, 418, 619
SfcI	CTRYAG	1 cut(s)	111
SinI	GGWCC	1 cut(s)	566
SmiMI	CAYNNNNRTG	1 cut(s)	561
Sse9I	AATT	3 cut(s)	276, 419, 585
SsiI	CCGC	1 cut(s)	22
SspMI	CTAG	1 cut(s)	653
SstI	GAGCTC	1 cut(s)	528
StyD4I	CCNGG	1 cut(s)	244
StyI	CCWWGG	3 cut(s)	164, 225, 615
TaiI	ACGT	1 cut(s)	449
TaqI	TCGA	2 cut(s)	39, 499
TasI	AATT	3 cut(s)	276, 419, 585
TfiI	GAWTC	2 cut(s)	496, 713
Tru1I	TTAA	4 cut(s)	330, 386, 509, 624
Tru9I	TTAA	4 cut(s)	330, 386, 509, 624
TscAI	CASTG	5 cut(s)	195, 262, 307, 486, 556
TseFI	GTSAC	1 cut(s)	298
TseI	GCWGC	1 cut(s)	338
Tsp45I	GTSAC	1 cut(s)	298
TspDTI	ATGAA	3 cut(s)	194, 612, 663
TspRI	CASTG	5 cut(s)	195, 262, 307, 486, 556
VpaK11BI	GGWCC	1 cut(s)	566
XagI	CCTNNNNNAGG	1 cut(s)	224
XmiI	GTMKAC	2 cut(s)	110, 642
XspI	CTAG	1 cut(s)	653

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.