Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005015

Physical Location & Seq

Genomic Coordinates Reverse (-)

54956516 .. 54960390

Gene Structure 3875 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0454900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGGATTCGGATTTGGAAGGAATTGAGGCTAGGGAGAGTAGGCTGCGCAATGCTTATGAGAGTGCTAATGCTCAAGCTTCGTCGATTTTGCGGTTCACGCTGCAATGGAAGGAGCTTGAGGAGCATATTGAGTACACTAAGGGGTTGTTTAAGGCCCGATTCGAGGAGGTTCGGAACCGGGAGAGGGAGATTGGGGTGAAGGAGAAGGAGATGGAGGAGGAAGAGGTGAAGTTTAAGGCGGAGAGGGACTCGAAAGCGAAGGATTTGCATAGGATTCAGAGGATGGTTGAGGAGAAGCAGAAGGAGATTGATGGGATGGAGAAGCGGTTTTCGGAGGTGGAGGATTTGGTTAGGGAGAAGGAGGTGGATTGTAAGTTGGTTCGGAAATGTATTGAAGAGGGGCAGAGGAAGTTGGGTTCGGTGGAAGAGCAGATTCGGGTGAAGGGGATGCAGTTGAAGTATGTTCAGGGGTTGGTTGAGAAGCAATGGAAGGAGCATGATTTGAAAGAGGAGAAGATTCGGGCAATGGAGAAGAAAGAGAAGGATTTCGGTTTGCTTGAGAAGTCGATGGAGGAGTGGGCCGGTAGACTTGAGGCAAAGGAGATGGAGCTTCGGAGATGGGTTGAGAAGCTTGAAGGACAGGAGAGAGAGGTTGGCTCTAAGATTGATGAAGTGAATTTGATTGATAAGAAGGTCCATGAATGCCTGAAAGAGGTTCAGTTGAAAGAACAGAATTTGTATTCCCTTGAAAAGTCACTACATGTACAATCGTGTGGACTTCAAAAGAAAGAGAGGGAGCTTGAAATCAAGCAAGAACAAGTTTATTCAGATGTGGTTCGAAAATCCACGAAAGTACACAGCCAGACTTTGAAATCGAAGGAGAATTCTCATCAATTGAAAGTTGAGGAATCAGAAGATACCATTCCTGCTGCTAACAATGGGAATCGGGATGGCAGAGGCTTGCAATTGTTAATGAACCAGCATTTGAGGAGGAATGATTTGATGCTTAAAGAAATTGACGATACTCTTCAAAGGTCATCAGATCCAGCGAAACTGGTGTTGGATGCAATGCATGGTTTTTACCCTTCATATTCGGCTGTGGAAAACAACAAGTTTGAGTTGACAGTTATTAGGAGGAGTTGTAATTTTTTGTTGAGGGAGTTAAAAAGAGTCTCTCCAAATATTACTCCTCAATTGAGAGGAGAAGCTATGAAGTTAGCAGTTGAGTGGAAAGCTAAGATGCATACTGACAACTGGTTGGAAGTATTGGGTCTTTTGCTGCTTCTTGCTGCTTATGATTTGAGCTCTACTTATGATGTGAAGGAGCTTGAAAGTCTTGTTGGTATAGTTGCTCAGCACAACTATGACGCAGCTGAATTATGCCTGGCTCTTGGTATTGGAGACAAGGCACCTGATCAGGACACACAGGGTCAAAGCACTTCAAAAAGAAATACAAGCAGCAACAATTGTTCCCCTGATAATAAAATTGAGAAACCTGCAGATTCTCCACTGGCCAATATTCAACGGACTACCACCACAAATACAGATTTACCGAACCCGCAGGTGTTACCAAATGAGCATTTGAGTACTGGGAATCCTTTGATGATTCCAGCTGTTACAGATGGTTCCTGTCAGTCATTAGTTGGTTTAGCAGGTAAAGTGGTTGCAGCAGGTGTGGTTCAGGAGCTTATTGCAAACAAGCAACTGCTTCAGGCCGTTGTGTTTAGTTGCACCCTCAAGTTAACTGACATGTTTCCCCCTGTGCCACTGTTAAAAGAATGTGCAGAGGGTGCGATAAGGAATGGCTCAAAGGCAGTAAAGGACCTGAAAGATGTGATTGGATGCATCAAAGATTACAACCTAGAGTCTGAATACCCATCCAAGGACATTGAATTGCAACTTCAGAAGCTGGAGAGCCTAATAGTGGATCGGGAAGCTGCATGTCTTGACGCCAAGCCAGTTAAACAACAAGCTAAGAAGAAAAGATGGAGGAAACGTGATAGCAGCACTTATGTCTCCGATTTTCAACCACCACAATCAGCGAAGAAGAAACACATCAAGTGTTACCATTGCAATGAGCCAGGGCATGTTCAGAGCAACTGTCCCCAAAGATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006082 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008168 GO:0008172 GO:0008757 GO:0009056 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0016020 GO:0016143 GO:0016145 GO:0016740 GO:0016741 GO:0018708 GO:0019748 GO:0019757 GO:0019759 GO:0019760 GO:0019762 GO:0031967 GO:0031975 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044248 GO:0044273 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0071704 GO:0071944 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575 GO:1901657 GO:1901658

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPMT

Protein Analysis

705

Amino Acids

80.65

Weight (kDa)

6.39

Isoelectric Point (pI)

54.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Frigida	PF07899	317 - 472	1.6e-30	Frigida-like protein
Frigida	PF07899	557 - 645	2.9e-13	Frigida-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005015)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43910 AT2G43910 AT2G43910 AT2G43920 AT2G43920 AT2G43920 AT2G43920 AT2G43920 AT2G43920 AT2G43940
fragaria_vesca	FvH4_1g00240 FvH4_1g00240 FvH4_1g00240
malus_domestica	MD15G1143500.v1.1
prunus_persica	Prupe.7G269600_v2.0.a1 Prupe.7G269600_v2.0.a1 Prupe.7G269600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0084541
rosa_laevigata	RLG00000015625
rosa_multiflora	Rmu_sc0009647.1_g000002
rosa_roxburghii	Rroxscaffold_2G00155980
rosa_rugosa	Rorug01G0454800 Rorug01G0454900 Rorug01G0455000 Rorug01G0455100
rosa_samantha	Rh2AG002900 Rh2BG002500 Rh2CG003000 Rh2DG003000
rosa_wichuraiana	Rw2G000260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1552, 1661
Acc16I	TGCGCA	1 cut(s)	47
Acc36I	ACCTGC	4 cut(s)	1504, 1552, 1643, 1661
AccB1I	GGYRCC	1 cut(s)	1408
AccI	GTMKAC	1 cut(s)	586
AciI	CCGC	4 cut(s)	91, 239, 325, 1559
AclWI	GGATC	2 cut(s)	1037, 1935
AcoI	YGGCCR	1 cut(s)	1512
AcsI	RAATTY	3 cut(s)	676, 733, 883
AcuI	CTGAAG	2 cut(s)	1694, 1886
AcyI	GRCGYC	1 cut(s)	1950
AfaI	GTAC	4 cut(s)	134, 765, 855, 1588
AfiI	CCNNNNNNNGG	5 cut(s)	163, 184, 712, 1882, 1924
AflIII	ACRYGT	2 cut(s)	760, 1749
AjnI	CCWGG	2 cut(s)	1383, 2080
AjuI	GAANNNNNNNTTGG	4 cut(s)	1043, 1075, 1323, 1355
AloI	GAACNNNNNNTCC	2 cut(s)	400, 432
Alw21I	GWGCWC	1 cut(s)	1307
Alw26I	GTCTC	3 cut(s)	1177, 1395, 2020
AlwI	GGATC	2 cut(s)	1037, 1935
AlwNI	CAGNNNCTG	1 cut(s)	1909
AoxI	GGCC	4 cut(s)	153, 579, 1512, 1713
ApoI	RAATTY	3 cut(s)	676, 733, 883
Asp700I	GAANNNNTTC	1 cut(s)	545
AspLEI	GCGC	1 cut(s)	48
AspS9I	GGNCC	4 cut(s)	154, 579, 694, 1822
AsuC2I	CCSGG	1 cut(s)	179
AsuHPI	GGTGA	3 cut(s)	208, 238, 451
AsuII	TTCGAA	1 cut(s)	838
AvaII	GGWCC	2 cut(s)	694, 1822
BalI	TGGCCA	1 cut(s)	1514
BanI	GGYRCC	1 cut(s)	1408
BanII	GRGCYC	1 cut(s)	1307
Bbv12I	GWGCWC	1 cut(s)	1307
BceAI	ACGGC	1 cut(s)	1700
BcgI	CGANNNNNNTGC	2 cut(s)	247, 281
BciT130I	CCWGG	2 cut(s)	1385, 2082
BclI	TGATCA	1 cut(s)	1414
BcnI	CCSGG	1 cut(s)	179
BcoDI	GTCTC	3 cut(s)	1177, 1395, 2020
BfaI	CTAG	2 cut(s)	30, 1862
BfmI	CTRYAG	1 cut(s)	1497
BfuAI	ACCTGC	4 cut(s)	1504, 1552, 1643, 1661
BlpI	GCTNAGC	1 cut(s)	1353
BmcAI	AGTACT	1 cut(s)	1588
Bme1390I	CCNGG	3 cut(s)	179, 1385, 2082
Bme18I	GGWCC	2 cut(s)	694, 1822
BmgT120I	GGNCC	4 cut(s)	154, 579, 694, 1822
BmiI	GGNNCC	3 cut(s)	176, 1410, 1627
BmrFI	CCNGG	3 cut(s)	179, 1385, 2082
BmrI	ACTGGG	1 cut(s)	1599
BmsI	GCATC	7 cut(s)	438, 993, 1054, 1230, 1832, 1854, 2102
BmuI	ACTGGG	1 cut(s)	1599
BplI	GAGNNNNNCTC	4 cut(s)	233, 265, 641, 673
BpmI	CTGGAG	1 cut(s)	1931
Bpu1102I	GCTNAGC	1 cut(s)	1353
Bpu14I	TTCGAA	1 cut(s)	838
BpuEI	CTTGAG	5 cut(s)	57, 137, 578, 611, 1721
BpuMI	CCSGG	1 cut(s)	179
BsaHI	GRCGYC	1 cut(s)	1950
BsaJI	CCNNGG	2 cut(s)	1881, 2081
BsaXI	ACNNNNNCTCC	6 cut(s)	311, 341, 1126, 1156, 1981, 2011
Bsc4I	CCNNNNNNNGG	5 cut(s)	163, 184, 712, 1882, 1924
Bse118I	RCCGGY	1 cut(s)	581
Bse1I	ACTGG	5 cut(s)	1059, 1259, 1515, 1594, 1958
Bse3DI	GCAATG	7 cut(s)	55, 110, 491, 531, 1074, 2068, 2080
BseBI	CCWGG	2 cut(s)	1385, 2082
BseDI	CCNNGG	2 cut(s)	1881, 2081
BseGI	GGATG	7 cut(s)	288, 321, 453, 955, 1069, 1847, 1877
BseLI	CCNNNNNNNGG	5 cut(s)	163, 184, 712, 1882, 1924
BseMI	GCAATG	7 cut(s)	55, 110, 491, 531, 1074, 2068, 2080
BseMII	CTCAG	1 cut(s)	1367
BseNI	ACTGG	5 cut(s)	1059, 1259, 1515, 1594, 1958
BsgI	GTGCAG	1 cut(s)	1803
BshFI	GGCC	4 cut(s)	155, 581, 1514, 1715
BshNI	GGYRCC	1 cut(s)	1408
BsiHKAI	GWGCWC	1 cut(s)	1307
BsiSI	CCGG	2 cut(s)	178, 582
BslFI	GGGAC	2 cut(s)	260, 2088
BslI	CCNNNNNNNGG	5 cut(s)	163, 184, 712, 1882, 1924
BsmAI	GTCTC	3 cut(s)	1177, 1395, 2020
BsmFI	GGGAC	2 cut(s)	260, 2088
BsmI	GAATGC	1 cut(s)	707
BsnI	GGCC	4 cut(s)	155, 581, 1514, 1715
Bsp119I	TTCGAA	1 cut(s)	838
Bsp1286I	GDGCHC	1 cut(s)	1307
Bsp1407I	TGTACA	1 cut(s)	763
Bsp143I	GATC	3 cut(s)	1042, 1414, 1927
Bsp1720I	GCTNAGC	1 cut(s)	1353
BspACI	CCGC	4 cut(s)	91, 239, 325, 1559
BspANI	GGCC	4 cut(s)	155, 581, 1514, 1715
BspCNI	CTCAG	1 cut(s)	1366
BspLI	GGNNCC	3 cut(s)	176, 1410, 1627
BspMAI	CTGCAG	1 cut(s)	1501
BspMI	ACCTGC	4 cut(s)	1504, 1552, 1643, 1661
BspPI	GGATC	2 cut(s)	1037, 1935
BspQI	GCTCTTC	1 cut(s)	420
BspT104I	TTCGAA	1 cut(s)	838
BspT107I	GGYRCC	1 cut(s)	1408
BsrDI	GCAATG	7 cut(s)	55, 110, 491, 531, 1074, 2068, 2080
BsrFI	RCCGGY	1 cut(s)	581
BsrGI	TGTACA	1 cut(s)	763
BsrI	ACTGG	5 cut(s)	1059, 1259, 1515, 1594, 1958
BssAI	RCCGGY	1 cut(s)	581
BssECI	CCNNGG	2 cut(s)	1881, 2081
BssMI	GATC	3 cut(s)	1042, 1414, 1927
BssNI	GRCGYC	1 cut(s)	1950
BssT1I	CCWWGG	1 cut(s)	1881
Bst2UI	CCWGG	2 cut(s)	1385, 2082
Bst4CI	ACNGT	3 cut(s)	1126, 1770, 2102
Bst6I	CTCTTC	4 cut(s)	216, 390, 420, 1032
BstACI	GRCGYC	1 cut(s)	1950
BstAPI	GCANNNNNTGC	1 cut(s)	1790
BstAUI	TGTACA	1 cut(s)	763
BstBI	TTCGAA	1 cut(s)	838
BstC8I	GCNNGC	1 cut(s)	962
BstDEI	CTNAG	5 cut(s)	138, 660, 1236, 1353, 1974
BstENI	CCTNNNNNAGG	1 cut(s)	710
BstF5I	GGATG	7 cut(s)	288, 321, 453, 955, 1069, 1847, 1877
BstHHI	GCGC	1 cut(s)	48
BstKTI	GATC	3 cut(s)	1045, 1417, 1930
BstMAI	GTCTC	3 cut(s)	1177, 1395, 2020
BstMBI	GATC	3 cut(s)	1042, 1414, 1927
BstMWI	GCNNNNNNNGC	3 cut(s)	97, 121, 1790
BstNI	CCWGG	2 cut(s)	1385, 2082
BstNSI	RCATGY	4 cut(s)	764, 1753, 1944, 2090
BstSCI	CCNGG	3 cut(s)	177, 1383, 2080
BstSFI	CTRYAG	1 cut(s)	1497
BstX2I	RGATCY	1 cut(s)	1042
BstYI	RGATCY	1 cut(s)	1042
BsuRI	GGCC	4 cut(s)	155, 581, 1514, 1715
BtsCI	GGATG	7 cut(s)	288, 321, 453, 955, 1069, 1847, 1877
BtsIMutI	CAGTG	2 cut(s)	1508, 1766
BveI	ACCTGC	4 cut(s)	1504, 1552, 1643, 1661
Cac8I	GCNNGC	1 cut(s)	962
CaiI	CAGNNNCTG	1 cut(s)	1909
CfoI	GCGC	1 cut(s)	48
Cfr10I	RCCGGY	1 cut(s)	581
Cfr13I	GGNCC	4 cut(s)	154, 579, 694, 1822
CseI	GACGC	2 cut(s)	1376, 1958
Csp6I	GTAC	4 cut(s)	133, 764, 854, 1587
CviAII	CATG	7 cut(s)	497, 698, 761, 1073, 1750, 1941, 2087
CviQI	GTAC	4 cut(s)	133, 764, 854, 1587
DdeI	CTNAG	5 cut(s)	138, 660, 1236, 1353, 1974
DpnI	GATC	3 cut(s)	1044, 1416, 1929
DpnII	GATC	3 cut(s)	1042, 1414, 1927
EaeI	YGGCCR	1 cut(s)	1512
Eam1104I	CTCTTC	4 cut(s)	216, 390, 420, 1032
EarI	CTCTTC	4 cut(s)	216, 390, 420, 1032
EciI	GGCGGA	1 cut(s)	254
Ecl136II	GAGCTC	1 cut(s)	1305
Eco130I	CCWWGG	1 cut(s)	1881
Eco24I	GRGCYC	1 cut(s)	1307
Eco47I	GGWCC	2 cut(s)	694, 1822
Eco53kI	GAGCTC	1 cut(s)	1305
Eco57I	CTGAAG	2 cut(s)	1694, 1886
EcoICRI	GAGCTC	1 cut(s)	1305
EcoNI	CCTNNNNNAGG	1 cut(s)	710
EcoO109I	RGGNCCY	1 cut(s)	1822
EcoRI	GAATTC	1 cut(s)	883
EcoRII	CCWGG	2 cut(s)	1383, 2080
EcoT14I	CCWWGG	1 cut(s)	1881
EcoT22I	ATGCAT	3 cut(s)	1074, 1245, 1847
EcoT38I	GRGCYC	1 cut(s)	1307
ErhI	CCWWGG	1 cut(s)	1881
FaeI	CATG	7 cut(s)	500, 701, 764, 1076, 1753, 1944, 2090
FaqI	GGGAC	2 cut(s)	260, 2088
FatI	CATG	7 cut(s)	496, 697, 760, 1072, 1749, 1940, 2086
FauI	CCCGC	1 cut(s)	1566
FbaI	TGATCA	1 cut(s)	1414
FblI	GTMKAC	1 cut(s)	586
FokI	GGATG	7 cut(s)	295, 328, 460, 962, 1076, 1854, 1864
FriOI	GRGCYC	1 cut(s)	1307
FspBI	CTAG	2 cut(s)	30, 1862
FspI	TGCGCA	1 cut(s)	47
GlaI	GCGC	1 cut(s)	47
GsuI	CTGGAG	1 cut(s)	1931
HaeIII	GGCC	4 cut(s)	155, 581, 1514, 1715
HapII	CCGG	2 cut(s)	178, 582
HgaI	GACGC	2 cut(s)	1376, 1958
HhaI	GCGC	1 cut(s)	48
Hin1I	GRCGYC	1 cut(s)	1950
Hin1II	CATG	7 cut(s)	500, 701, 764, 1076, 1753, 1944, 2090
Hin6I	GCGC	1 cut(s)	46
HinP1I	GCGC	1 cut(s)	46
HincII	GTYRAC	2 cut(s)	1122, 1743
HindII	GTYRAC	2 cut(s)	1122, 1743
HindIII	AAGCTT	2 cut(s)	75, 629
HpaI	GTTAAC	1 cut(s)	1743
HpaII	CCGG	2 cut(s)	178, 582
HphI	GGTGA	3 cut(s)	208, 238, 451
Hpy166II	GTNNAC	7 cut(s)	96, 135, 587, 776, 856, 1122, 1743
Hpy188III	TCNNGA	5 cut(s)	947, 1418, 1682, 1931, 1946
Hpy8I	GTNNAC	7 cut(s)	96, 135, 587, 776, 856, 1122, 1743
Hpy99I	CGWCG	1 cut(s)	85
HpyCH4III	ACNGT	3 cut(s)	1126, 1770, 2102
HpyCH4IV	ACGT	1 cut(s)	1996
HpyF10VI	GCNNNNNNNGC	3 cut(s)	97, 121, 1790
HpyF3I	CTNAG	5 cut(s)	138, 660, 1236, 1353, 1974
HpySE526I	ACGT	1 cut(s)	1996
Hsp92I	GRCGYC	1 cut(s)	1950
Hsp92II	CATG	7 cut(s)	500, 701, 764, 1076, 1753, 1944, 2090
HspAI	GCGC	1 cut(s)	46
Ksp22I	TGATCA	1 cut(s)	1414
KspAI	GTTAAC	1 cut(s)	1743
Kzo9I	GATC	3 cut(s)	1042, 1414, 1927
LguI	GCTCTTC	1 cut(s)	420
LmnI	GCTCC	7 cut(s)	112, 121, 493, 607, 796, 1324, 1684
LweI	GCATC	7 cut(s)	438, 993, 1054, 1230, 1832, 1854, 2102
MaeI	CTAG	2 cut(s)	30, 1862
MaeII	ACGT	1 cut(s)	1996
MaeIII	GTNAC	4 cut(s)	753, 1566, 1615, 2063
MalI	GATC	3 cut(s)	1044, 1416, 1929
MboI	GATC	3 cut(s)	1042, 1414, 1927
MfeI	CAATTG	4 cut(s)	893, 965, 1193, 1465
MflI	RGATCY	1 cut(s)	1042
MhlI	GDGCHC	1 cut(s)	1307
MlsI	TGGCCA	1 cut(s)	1514
MluNI	TGGCCA	1 cut(s)	1514
MlyI	GAGTC	3 cut(s)	242, 1179, 1874
MmeI	TCCRAC	2 cut(s)	1041, 1239
Mox20I	TGGCCA	1 cut(s)	1514
Mph1103I	ATGCAT	3 cut(s)	1074, 1245, 1847
MroXI	GAANNNNTTC	1 cut(s)	545
MscI	TGGCCA	1 cut(s)	1514
MseI	TTAA	8 cut(s)	150, 234, 971, 1008, 1163, 1742, 1772, 1962
MslI	CAYNNNNRTG	2 cut(s)	1362, 2073
Msp20I	TGGCCA	1 cut(s)	1514
MspA1I	CMGCKG	2 cut(s)	1373, 1613
MspI	CCGG	2 cut(s)	178, 582
MspR9I	CCNGG	3 cut(s)	179, 1385, 2082
MunI	CAATTG	4 cut(s)	893, 965, 1193, 1465
Mva1269I	GAATGC	1 cut(s)	707
MvaI	CCWGG	2 cut(s)	1385, 2082
MwoI	GCNNNNNNNGC	3 cut(s)	97, 121, 1790
NciI	CCSGG	1 cut(s)	179
NdeII	GATC	3 cut(s)	1042, 1414, 1927
NlaIII	CATG	7 cut(s)	500, 701, 764, 1076, 1753, 1944, 2090
NlaIV	GGNNCC	3 cut(s)	176, 1410, 1627
NmuCI	GTSAC	1 cut(s)	753
NsbI	TGCGCA	1 cut(s)	47
NsiI	ATGCAT	3 cut(s)	1074, 1245, 1847
NspI	RCATGY	4 cut(s)	764, 1753, 1944, 2090
NspV	TTCGAA	1 cut(s)	838
PaqCI	CACCTGC	2 cut(s)	1552, 1661
PciI	ACATGT	2 cut(s)	760, 1749
PciSI	GCTCTTC	1 cut(s)	420
PctI	GAATGC	1 cut(s)	707
PdmI	GAANNNNTTC	1 cut(s)	545
PleI	GAGTC	3 cut(s)	242, 1178, 1873
PpsI	GAGTC	3 cut(s)	242, 1178, 1873
PpuMI	RGGWCCY	1 cut(s)	1822
PscI	ACATGT	2 cut(s)	760, 1749
Psp124BI	GAGCTC	1 cut(s)	1307
Psp5II	RGGWCCY	1 cut(s)	1822
Psp6I	CCWGG	2 cut(s)	1383, 2080
PspGI	CCWGG	2 cut(s)	1383, 2080
PspN4I	GGNNCC	3 cut(s)	176, 1410, 1627
PspPI	GGNCC	4 cut(s)	154, 579, 694, 1822
PspPPI	RGGWCCY	1 cut(s)	1822
PstI	CTGCAG	1 cut(s)	1501
PstNI	CAGNNNCTG	1 cut(s)	1909
PsuI	RGATCY	1 cut(s)	1042
PvuII	CAGCTG	2 cut(s)	1373, 1613
RsaI	GTAC	4 cut(s)	134, 765, 855, 1588
RsaNI	GTAC	4 cut(s)	133, 764, 854, 1587
RseI	CAYNNNNRTG	2 cut(s)	1362, 2073
SacI	GAGCTC	1 cut(s)	1307
SapI	GCTCTTC	1 cut(s)	420
SaqAI	TTAA	8 cut(s)	150, 234, 971, 1008, 1163, 1742, 1772, 1962
Sau3AI	GATC	3 cut(s)	1042, 1414, 1927
Sau96I	GGNCC	4 cut(s)	154, 579, 694, 1822
ScaI	AGTACT	1 cut(s)	1588
SchI	GAGTC	3 cut(s)	242, 1179, 1874
ScrFI	CCNGG	3 cut(s)	179, 1385, 2082
SduI	GDGCHC	1 cut(s)	1307
SfaNI	GCATC	7 cut(s)	438, 993, 1054, 1230, 1832, 1854, 2102
SfcI	CTRYAG	1 cut(s)	1497
SfuI	TTCGAA	1 cut(s)	838
SinI	GGWCC	2 cut(s)	694, 1822
SmiMI	CAYNNNNRTG	2 cut(s)	1362, 2073
SmlI	CTYRAG	5 cut(s)	72, 116, 557, 590, 1736
SmoI	CTYRAG	5 cut(s)	72, 116, 557, 590, 1736
SsiI	CCGC	4 cut(s)	91, 239, 325, 1559
SspI	AATATT	2 cut(s)	1183, 1519
SspMI	CTAG	2 cut(s)	30, 1862
SstI	GAGCTC	1 cut(s)	1307
StyD4I	CCNGG	3 cut(s)	177, 1383, 2080
StyI	CCWWGG	1 cut(s)	1881
TaaI	ACNGT	3 cut(s)	1126, 1770, 2102
TaiI	ACGT	1 cut(s)	1999
TaqI	TCGA	6 cut(s)	83, 162, 251, 566, 838, 875
TatI	WGTACW	4 cut(s)	132, 763, 853, 1586
Tru1I	TTAA	8 cut(s)	150, 234, 971, 1008, 1163, 1742, 1772, 1962
Tru9I	TTAA	8 cut(s)	150, 234, 971, 1008, 1163, 1742, 1772, 1962
TscAI	CASTG	2 cut(s)	1515, 1773
TseFI	GTSAC	1 cut(s)	753
Tsp45I	GTSAC	1 cut(s)	753
TspDTI	ATGAA	5 cut(s)	684, 714, 989, 1077, 1226
TspGWI	ACGGA	1 cut(s)	1540
TspRI	CASTG	2 cut(s)	1515, 1773
VpaK11BI	GGWCC	2 cut(s)	694, 1822
XagI	CCTNNNNNAGG	1 cut(s)	710
XapI	RAATTY	3 cut(s)	676, 733, 883
XceI	RCATGY	4 cut(s)	764, 1753, 1944, 2090
XmiI	GTMKAC	1 cut(s)	586
XmnI	GAANNNNTTC	1 cut(s)	545
XspI	CTAG	2 cut(s)	30, 1862
ZrmI	AGTACT	1 cut(s)	1588
Zsp2I	ATGCAT	3 cut(s)	1074, 1245, 1847

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.