Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0008118

Physical Location & Seq

Genomic Coordinates Reverse (-)

1158206 .. 1159549

Gene Structure 1344 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G014200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 999 bp

ATGGATAGAGAACAAGATGAACTGCAATTTCTTGGGATCTTTGGCATCTGCAAAGAAGCCTACAAAATTGTATTTTCATGGAGAAAAATCTTCAGCCAAATCACCTTAACCCTGATCCTCCCTTTGAGCTTCATCTTCTTGGCTCACATAGAGCTCTCAAACATCCTTCTCTTAAAGATCATCCACAACGAAAGAGTCTTAGACCGAACAAACACCAACAGTCCAAGATATCAAAGAGTATCGGATGTCATATCCTCTGAGTGGGCAACTTTTTGGCTTTTCAAAGCTGTATACTTCACTTTCTTGCTCATCTTCAGCCTCCTCTCCACCTCGGCCGTGGTATACACGATCGCATGTATATACACGGGGCGAGAAATCACCTACAGGAAGGTGATGAGCGTCGTCCCGAAAGTGTGGAAGCGAGTCATGGTGACGTTCTTTTGCACTTTCATGGCTTTCTTTGCCTACAACATAGTGGCTTTTATTGTCCTAATTATTTGGTTAGTTTCGGTGGCCCTTACTGACGCTGGTGGTATTATTGGTTTCTTTCTGCTCATCTTTTATTTCATCGGGTTCGTTTACTTGTCCTTAATCTGGCTACTGGCGAGCGTGGTCTCTGTGTTAGAGGAAGCAAGAGGGATCAAAGCCATGACCAAGAGCAAGGCGTTGCTAAAAGGAAACATGTGGGTGGCTGCAATTATTTTTTTCATGCTCAATGTTCTGGGCGGCCTTCTGCAGTTTGCATTTCAAAAGCTAGTTGTGCATGGATATTCATTTGGTGTGGTGGGTAGAGTTGCTTATGGATTTATATGCTTGTTGCTGCTGTTCAAGCTCATCTTGTTCTGGCTTGTCATCCAAACCGTGCTCTATTTTGTCTGCAAGTCTTACCACCATGAAAACATCGACAAATCTGCCCTATCAGATCATCTGGAGGTTTATTTAGGAGACTATGTTCCTTTGACTGCTAAAGATGTTCAGCTTGAGCAAGTTAATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

333

Amino Acids

38.19

Weight (kDa)

9.06

Isoelectric Point (pI)

26.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008118)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g15070
malus_domestica	MD05G1011000.v1.1 MD10G1010500.v1.1 MD10G1010700.v1.1
prunus_persica	Prupe.8G014200_v2.0.a1
pyrus_communis	pycom05g00620 pycom10g00680
rosa_chinensis	RchiOBHm_Chr6g0277711 RchiOBHm_Chr6g0277721
rosa_laevigata	RLG00000013280 RLG00000013281
rosa_multiflora	Rmu_sc0007109.1_g000007 Rmu_sc0007109.1_g000008 Rmu_sc0007109.1_g000012
rosa_roxburghii	Rroxscaffold_7G00191010 Rroxscaffold_7G00191030
rosa_rugosa	Rorug06G0110500 Rorug06G0110500
rosa_samantha	Rh6BG225000 Rh6CG227400 Rh6DG218100 Rh6DG218200
rosa_wichuraiana	Rw6G019360 Rw6G019370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	291, 342
AciI	CCGC	1 cut(s)	726
AclWI	GGATC	3 cut(s)	44, 109, 647
AcoI	YGGCCR	1 cut(s)	333
AcuI	CTGAAG	2 cut(s)	76, 298
AfiI	CCNNNNNNNGG	2 cut(s)	261, 594
AflIII	ACRYGT	1 cut(s)	681
AgsI	TTSAA	3 cut(s)	283, 749, 829
AloI	GAACNNNNNNTCC	2 cut(s)	936, 968
AluBI	AGCT	6 cut(s)	129, 154, 287, 754, 832, 979
AluI	AGCT	6 cut(s)	129, 154, 287, 754, 832, 979
Alw21I	GWGCWC	2 cut(s)	156, 867
Alw26I	GTCTC	2 cut(s)	619, 939
AlwI	GGATC	3 cut(s)	44, 109, 647
AoxI	GGCC	3 cut(s)	333, 513, 727
ApeKI	GCWGC	2 cut(s)	692, 820
AspS9I	GGNCC	1 cut(s)	514
AsuHPI	GGTGA	4 cut(s)	94, 370, 403, 442
BanII	GRGCYC	1 cut(s)	156
Bbv12I	GWGCWC	2 cut(s)	156, 867
BbvI	GCAGC	2 cut(s)	679, 807
BceAI	ACGGC	1 cut(s)	320
BcgI	CGANNNNNNTGC	2 cut(s)	893, 927
BcoDI	GTCTC	2 cut(s)	619, 939
BfaI	CTAG	1 cut(s)	755
BfmI	CTRYAG	2 cut(s)	382, 734
BisI	GCNGC	3 cut(s)	693, 727, 821
BlsI	GCNGC	3 cut(s)	694, 728, 822
BmgT120I	GGNCC	1 cut(s)	514
BmsI	GCATC	1 cut(s)	54
BpmI	CTGGAG	1 cut(s)	950
BsaI	GGTCTC	1 cut(s)	619
BsaJI	CCNNGG	2 cut(s)	330, 336
BsaXI	ACNNNNNCTCC	2 cut(s)	936, 966
Bsc4I	CCNNNNNNNGG	2 cut(s)	261, 594
Bse1I	ACTGG	1 cut(s)	606
BseDI	CCNNGG	2 cut(s)	330, 336
BseGI	GGATG	4 cut(s)	162, 180, 250, 852
BseLI	CCNNNNNNNGG	2 cut(s)	261, 594
BseMII	CTCAG	1 cut(s)	249
BseNI	ACTGG	1 cut(s)	606
BseRI	GAGGAG	1 cut(s)	311
BseX3I	CGGCCG	1 cut(s)	333
BseXI	GCAGC	2 cut(s)	679, 807
Bsh1285I	CGRYCG	2 cut(s)	336, 351
BshFI	GGCC	3 cut(s)	335, 515, 729
BsiEI	CGRYCG	2 cut(s)	336, 351
BsiHKAI	GWGCWC	2 cut(s)	156, 867
BslFI	GGGAC	1 cut(s)	389
BslI	CCNNNNNNNGG	2 cut(s)	261, 594
BsmAI	GTCTC	2 cut(s)	619, 939
BsmFI	GGGAC	1 cut(s)	389
BsnI	GGCC	3 cut(s)	335, 515, 729
Bso31I	GGTCTC	1 cut(s)	619
Bsp1286I	GDGCHC	2 cut(s)	156, 867
Bsp143I	GATC	6 cut(s)	36, 114, 177, 348, 639, 922
BspACI	CCGC	1 cut(s)	726
BspANI	GGCC	3 cut(s)	335, 515, 729
BspCNI	CTCAG	1 cut(s)	250
BspMAI	CTGCAG	1 cut(s)	738
BspPI	GGATC	3 cut(s)	44, 109, 647
BspTNI	GGTCTC	1 cut(s)	619
BsrI	ACTGG	1 cut(s)	606
BssECI	CCNNGG	2 cut(s)	330, 336
BssMI	GATC	6 cut(s)	36, 114, 177, 348, 639, 922
BssNAI	GTATAC	2 cut(s)	292, 343
Bst1107I	GTATAC	2 cut(s)	292, 343
Bst4CI	ACNGT	2 cut(s)	221, 862
BstC8I	GCNNGC	1 cut(s)	607
BstDEI	CTNAG	2 cut(s)	199, 258
BstDSI	CCRYGG	1 cut(s)	336
BstF5I	GGATG	4 cut(s)	162, 180, 250, 852
BstKTI	GATC	6 cut(s)	39, 117, 180, 351, 642, 925
BstMAI	GTCTC	2 cut(s)	619, 939
BstMBI	GATC	6 cut(s)	36, 114, 177, 348, 639, 922
BstMCI	CGRYCG	2 cut(s)	336, 351
BstMWI	GCNNNNNNNGC	3 cut(s)	461, 760, 829
BstNSI	RCATGY	2 cut(s)	357, 685
BstSFI	CTRYAG	2 cut(s)	382, 734
BstV1I	GCAGC	2 cut(s)	679, 807
BstX2I	RGATCY	1 cut(s)	36
BstYI	RGATCY	1 cut(s)	36
BstZ17I	GTATAC	2 cut(s)	292, 343
BstZI	CGGCCG	1 cut(s)	333
BsuRI	GGCC	3 cut(s)	335, 515, 729
BtgI	CCRYGG	1 cut(s)	336
BtsCI	GGATG	4 cut(s)	162, 180, 250, 852
Cac8I	GCNNGC	1 cut(s)	607
Cfr13I	GGNCC	1 cut(s)	514
CseI	GACGC	2 cut(s)	388, 533
CviAII	CATG	9 cut(s)	78, 354, 427, 451, 649, 682, 709, 764, 893
DdeI	CTNAG	2 cut(s)	199, 258
DpnI	GATC	6 cut(s)	38, 116, 179, 350, 641, 924
DpnII	GATC	6 cut(s)	36, 114, 177, 348, 639, 922
EaeI	YGGCCR	1 cut(s)	333
EagI	CGGCCG	1 cut(s)	333
Ecl136II	GAGCTC	1 cut(s)	154
EclXI	CGGCCG	1 cut(s)	333
Eco24I	GRGCYC	1 cut(s)	156
Eco31I	GGTCTC	1 cut(s)	619
Eco32I	GATATC	1 cut(s)	230
Eco52I	CGGCCG	1 cut(s)	333
Eco53kI	GAGCTC	1 cut(s)	154
Eco57I	CTGAAG	2 cut(s)	76, 298
EcoICRI	GAGCTC	1 cut(s)	154
EcoRV	GATATC	1 cut(s)	230
EcoT38I	GRGCYC	1 cut(s)	156
FaeI	CATG	9 cut(s)	81, 357, 430, 454, 652, 685, 712, 767, 896
FalI	AAGNNNNNCTT	2 cut(s)	821, 853
FaqI	GGGAC	1 cut(s)	389
FatI	CATG	9 cut(s)	77, 353, 426, 450, 648, 681, 708, 763, 892
FblI	GTMKAC	2 cut(s)	291, 342
Fnu4HI	GCNGC	3 cut(s)	693, 727, 821
FokI	GGATG	4 cut(s)	149, 167, 257, 839
FriOI	GRGCYC	1 cut(s)	156
Fsp4HI	GCNGC	3 cut(s)	693, 727, 821
FspBI	CTAG	1 cut(s)	755
GluI	GCNGC	3 cut(s)	693, 727, 821
GsuI	CTGGAG	1 cut(s)	950
HaeIII	GGCC	3 cut(s)	335, 515, 729
HgaI	GACGC	2 cut(s)	388, 533
Hin1II	CATG	9 cut(s)	81, 357, 430, 454, 652, 685, 712, 767, 896
HinfI	GANTC	2 cut(s)	195, 423
HphI	GGTGA	4 cut(s)	94, 370, 403, 442
Hpy166II	GTNNAC	3 cut(s)	292, 343, 580
Hpy188I	TCNGA	3 cut(s)	244, 259, 922
Hpy188III	TCNNGA	2 cut(s)	406, 929
Hpy8I	GTNNAC	3 cut(s)	292, 343, 580
Hpy99I	CGWCG	1 cut(s)	404
HpyAV	CCTTC	3 cut(s)	176, 382, 740
HpyCH4III	ACNGT	2 cut(s)	221, 862
HpyCH4IV	ACGT	1 cut(s)	434
HpyCH4V	TGCA	8 cut(s)	25, 51, 444, 695, 736, 743, 763, 879
HpyF10VI	GCNNNNNNNGC	3 cut(s)	461, 760, 829
HpyF3I	CTNAG	2 cut(s)	199, 258
HpySE526I	ACGT	1 cut(s)	434
Hsp92II	CATG	9 cut(s)	81, 357, 430, 454, 652, 685, 712, 767, 896
Kzo9I	GATC	6 cut(s)	36, 114, 177, 348, 639, 922
LpnPI	CCDG	8 cut(s)	125, 370, 513, 580, 587, 707, 829, 914
Lsp1109I	GCAGC	2 cut(s)	679, 807
LweI	GCATC	1 cut(s)	54
MaeI	CTAG	1 cut(s)	755
MaeII	ACGT	1 cut(s)	434
MaeIII	GTNAC	1 cut(s)	430
MalI	GATC	6 cut(s)	38, 116, 179, 350, 641, 924
MboI	GATC	6 cut(s)	36, 114, 177, 348, 639, 922
MboII	GAAGA	3 cut(s)	82, 127, 304
MflI	RGATCY	1 cut(s)	36
MhlI	GDGCHC	2 cut(s)	156, 867
MluCI	AATT	4 cut(s)	26, 66, 492, 696
MlyI	GAGTC	2 cut(s)	204, 432
MnlI	CCTC	8 cut(s)	128, 265, 329, 332, 340, 619, 629, 925
MseI	TTAA	4 cut(s)	107, 173, 590, 990
MslI	CAYNNNNRTG	2 cut(s)	449, 686
MwoI	GCNNNNNNNGC	3 cut(s)	461, 760, 829
NdeII	GATC	6 cut(s)	36, 114, 177, 348, 639, 922
NlaIII	CATG	9 cut(s)	81, 357, 430, 454, 652, 685, 712, 767, 896
NmeAIII	GCCGAG	1 cut(s)	311
NmuCI	GTSAC	1 cut(s)	430
NspI	RCATGY	2 cut(s)	357, 685
PciI	ACATGT	1 cut(s)	681
PkrI	GCNGC	3 cut(s)	694, 728, 822
Ple19I	CGATCG	1 cut(s)	351
PleI	GAGTC	2 cut(s)	203, 431
PpsI	GAGTC	2 cut(s)	203, 431
PscI	ACATGT	1 cut(s)	681
Psp124BI	GAGCTC	1 cut(s)	156
PspPI	GGNCC	1 cut(s)	514
PstI	CTGCAG	1 cut(s)	738
PsuI	RGATCY	1 cut(s)	36
PvuI	CGATCG	1 cut(s)	351
RseI	CAYNNNNRTG	2 cut(s)	449, 686
SacI	GAGCTC	1 cut(s)	156
SaqAI	TTAA	4 cut(s)	107, 173, 590, 990
SatI	GCNGC	3 cut(s)	693, 727, 821
Sau3AI	GATC	6 cut(s)	36, 114, 177, 348, 639, 922
Sau96I	GGNCC	1 cut(s)	514
SchI	GAGTC	2 cut(s)	204, 432
SduI	GDGCHC	2 cut(s)	156, 867
SfaNI	GCATC	1 cut(s)	54
SfcI	CTRYAG	2 cut(s)	382, 734
SmiMI	CAYNNNNRTG	2 cut(s)	449, 686
SmlI	CTYRAG	1 cut(s)	980
SmoI	CTYRAG	1 cut(s)	980
Sse9I	AATT	4 cut(s)	26, 66, 492, 696
SsiI	CCGC	1 cut(s)	726
SspMI	CTAG	1 cut(s)	755
SstI	GAGCTC	1 cut(s)	156
TaaI	ACNGT	2 cut(s)	221, 862
TaiI	ACGT	1 cut(s)	437
TaqI	TCGA	1 cut(s)	903
TaqII	GACCGA	1 cut(s)	219
TasI	AATT	4 cut(s)	26, 66, 492, 696
TauI	GCSGC	1 cut(s)	729
Tru1I	TTAA	4 cut(s)	107, 173, 590, 990
Tru9I	TTAA	4 cut(s)	107, 173, 590, 990
TseFI	GTSAC	1 cut(s)	430
TseI	GCWGC	2 cut(s)	692, 820
Tsp45I	GTSAC	1 cut(s)	430
TspDTI	ATGAA	8 cut(s)	33, 66, 121, 439, 556, 697, 762, 909
XceI	RCATGY	2 cut(s)	357, 685
XcmI	CCANNNNNNNNNTGG	1 cut(s)	334
XmiI	GTMKAC	2 cut(s)	291, 342
XspI	CTAG	1 cut(s)	755

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.