Prupe.8G050700_v2.0.a1

Protein of unknown function (DUF679)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
5521612 .. 5522259
648 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G050700.1

Sequence Viewer

Length: 648 bp
ATGGAAAACAACCCCATCATCCAAGACCTGATTGACAGCAGTGAACATGACGATGATGATTACTTGTGCTTCAAAGACGAAGACACTGACCAATCCCAATATTGCATGTATGCTTTGAATGCAATACTAAGTGGCACAGCCCGCCTCCATGTTCTTTTGCCCACGGCCACCATTCTTTCCTTCACCATTTTTGCTCCTCTCCTTACTAATGATGGCTTCTGCACGGCTTTCGACCGCTGGATGATGGGTTTCTTCATTGCTCTTTTATCAGCGTCGTGCATCTTCTTTACATTCACTGATAGCTTCAAAACAGCAACTGGCAGGTTGTACTATGGAGTGGCCACGTTTAGGGGCATATGGGCTTTCAATGGTGCCCGGAAGATGCCGTGTGTGCCGTCTGATTATAGGCTGAGATGGGCTGATCTCTTCCATGCGTTGCTTTCGTTAATAGCGTTTCTGACATTTGCAGCTTCGCATTATGGTGTTATGGGTTGCTATTACCCAGCAATGCCGAGGAGGCTGACCAACACCCTTCCTCTTCTTGTTGGGTTTGTTGTTAGTGTTTTGTTTGTGTTGTTTCCTTCTAAGAGAAGAGGGATTGGTTATCCTTTCTTGCTGCTCAGGGATGCTTTGTACTCTAGATATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

216

Amino Acids

24.45

Weight (kDa)

6.39

Isoelectric Point (pI)

48.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 312
AccB1I GGYRCC 1 cut(s) 371
AciI CCGC 2 cut(s) 142, 235
AcoI YGGCCR 2 cut(s) 165, 339
AfaI GTAC 2 cut(s) 329, 635
AfiI CCNNNNNNNGG 1 cut(s) 348
AgsI TTSAA 4 cut(s) 73, 118, 307, 367
AluBI AGCT 2 cut(s) 303, 470
AluI AGCT 2 cut(s) 303, 470
AlwNI CAGNNNCTG 1 cut(s) 317
AoxI GGCC 2 cut(s) 165, 339
ApeKI GCWGC 2 cut(s) 467, 616
AsuC2I CCSGG 1 cut(s) 376
AsuHPI GGTGA 1 cut(s) 175
BaeGI GKGCMC 1 cut(s) 376
BalI TGGCCA 1 cut(s) 341
BanI GGYRCC 1 cut(s) 371
BbsI GAAGAC 1 cut(s) 87
BbvI GCAGC 2 cut(s) 479, 603
BccI CCATC 4 cut(s) 23, 206, 238, 408
BceAI ACGGC 4 cut(s) 180, 240, 370, 379
BcgI CGANNNNNNTGC 2 cut(s) 211, 245
BcnI CCSGG 1 cut(s) 376
BfaI CTAG 1 cut(s) 639
BfuAI ACCTGC 1 cut(s) 312
BglI GCCNNNNNGGC 1 cut(s) 517
BisI GCNGC 2 cut(s) 468, 617
BlsI GCNGC 2 cut(s) 469, 618
Bme1390I CCNGG 1 cut(s) 376
BmiI GGNNCC 1 cut(s) 373
BmrFI CCNGG 1 cut(s) 376
BmsI GCATC 3 cut(s) 288, 372, 616
BpiI GAAGAC 1 cut(s) 87
Bpu10I CCTNAGC 1 cut(s) 620
BpuMI CCSGG 1 cut(s) 376
BsaJI CCNNGG 2 cut(s) 162, 512
Bsc4I CCNNNNNNNGG 1 cut(s) 348
Bse1I ACTGG 1 cut(s) 322
Bse3DI GCAATG 2 cut(s) 255, 513
BseDI CCNNGG 2 cut(s) 162, 512
BseGI GGATG 3 cut(s) 18, 246, 631
BseLI CCNNNNNNNGG 1 cut(s) 348
BseMI GCAATG 2 cut(s) 255, 513
BseMII CTCAG 2 cut(s) 401, 634
BseNI ACTGG 1 cut(s) 322
BseRI GAGGAG 2 cut(s) 186, 529
BseSI GKGCMC 1 cut(s) 376
BseXI GCAGC 2 cut(s) 479, 603
BseYI CCCAGC 1 cut(s) 502
BsgI GTGCAG 1 cut(s) 205
Bsh1285I CGRYCG 1 cut(s) 235
BshFI GGCC 2 cut(s) 167, 341
BshNI GGYRCC 1 cut(s) 371
BsiEI CGRYCG 1 cut(s) 235
BsiSI CCGG 1 cut(s) 376
BslI CCNNNNNNNGG 1 cut(s) 348
BsmI GAATGC 1 cut(s) 124
BsnI GGCC 2 cut(s) 167, 341
Bsp1286I GDGCHC 1 cut(s) 376
Bsp143I GATC 1 cut(s) 421
BspACI CCGC 2 cut(s) 142, 235
BspANI GGCC 2 cut(s) 167, 341
BspCNI CTCAG 2 cut(s) 402, 633
BspLI GGNNCC 1 cut(s) 373
BspMI ACCTGC 1 cut(s) 312
BspT107I GGYRCC 1 cut(s) 371
BsrDI GCAATG 2 cut(s) 255, 513
BsrI ACTGG 1 cut(s) 322
BssECI CCNNGG 2 cut(s) 162, 512
BssMI GATC 1 cut(s) 421
Bst6I CTCTTC 3 cut(s) 431, 543, 586
BstC8I GCNNGC 1 cut(s) 142
BstDEI CTNAG 4 cut(s) 128, 410, 585, 620
BstDSI CCRYGG 1 cut(s) 162
BstF5I GGATG 3 cut(s) 18, 246, 631
BstKTI GATC 1 cut(s) 424
BstMBI GATC 1 cut(s) 421
BstMCI CGRYCG 1 cut(s) 235
BstMWI GCNNNNNNNGC 4 cut(s) 119, 141, 391, 517
BstNSI RCATGY 1 cut(s) 109
BstSCI CCNGG 1 cut(s) 374
BstSLI GKGCMC 1 cut(s) 376
BstV1I GCAGC 2 cut(s) 479, 603
BstV2I GAAGAC 1 cut(s) 87
BsuRI GGCC 2 cut(s) 167, 341
BtgI CCRYGG 1 cut(s) 162
BtsCI GGATG 3 cut(s) 18, 246, 631
BtsI GCAGTG 1 cut(s) 46
BtsIMutI CAGTG 3 cut(s) 46, 84, 294
BveI ACCTGC 1 cut(s) 312
Cac8I GCNNGC 1 cut(s) 142
CaiI CAGNNNCTG 1 cut(s) 317
CseI GACGC 1 cut(s) 261
Csp6I GTAC 2 cut(s) 328, 634
CviAII CATG 4 cut(s) 47, 106, 149, 431
CviQI GTAC 2 cut(s) 328, 634
DdeI CTNAG 4 cut(s) 128, 410, 585, 620
DpnI GATC 1 cut(s) 423
DpnII GATC 1 cut(s) 421
EaeI YGGCCR 2 cut(s) 165, 339
Eam1104I CTCTTC 3 cut(s) 431, 543, 586
EarI CTCTTC 3 cut(s) 431, 543, 586
FaeI CATG 4 cut(s) 50, 109, 152, 434
FatI CATG 4 cut(s) 46, 105, 148, 430
FauI CCCGC 1 cut(s) 149
FauNDI CATATG 1 cut(s) 356
Fnu4HI GCNGC 2 cut(s) 468, 617
FokI GGATG 3 cut(s) 5, 253, 638
Fsp4HI GCNGC 2 cut(s) 468, 617
FspBI CTAG 1 cut(s) 639
GluI GCNGC 2 cut(s) 468, 617
GsaI CCCAGC 1 cut(s) 506
HaeIII GGCC 2 cut(s) 167, 341
HapII CCGG 1 cut(s) 376
HgaI GACGC 1 cut(s) 261
Hin1II CATG 4 cut(s) 50, 109, 152, 434
HpaII CCGG 1 cut(s) 376
HphI GGTGA 1 cut(s) 175
Hpy166II GTNNAC 1 cut(s) 44
Hpy188I TCNGA 2 cut(s) 400, 459
Hpy188III TCNNGA 1 cut(s) 639
Hpy8I GTNNAC 1 cut(s) 44
Hpy99I CGWCG 1 cut(s) 277
HpyAV CCTTC 3 cut(s) 190, 542, 591
HpyCH4IV ACGT 1 cut(s) 344
HpyCH4V TGCA 5 cut(s) 105, 122, 222, 279, 467
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 141, 391, 517
HpyF3I CTNAG 4 cut(s) 128, 410, 585, 620
HpySE526I ACGT 1 cut(s) 344
Hsp92II CATG 4 cut(s) 50, 109, 152, 434
Kzo9I GATC 1 cut(s) 421
LmnI GCTCC 1 cut(s) 199
LpnPI CCDG 7 cut(s) 41, 223, 303, 307, 389, 516, 607
Lsp1109I GCAGC 2 cut(s) 479, 603
LweI GCATC 3 cut(s) 288, 372, 616
MaeI CTAG 1 cut(s) 639
MaeII ACGT 1 cut(s) 344
MalI GATC 1 cut(s) 423
MboI GATC 1 cut(s) 421
MboII GAAGA 7 cut(s) 92, 244, 274, 391, 418, 530, 603
MhlI GDGCHC 1 cut(s) 376
MlsI TGGCCA 1 cut(s) 341
MluNI TGGCCA 1 cut(s) 341
MnlI CCTC 6 cut(s) 155, 207, 507, 510, 546, 587
Mox20I TGGCCA 1 cut(s) 341
MscI TGGCCA 1 cut(s) 341
MseI TTAA 1 cut(s) 446
MslI CAYNNNNRTG 2 cut(s) 51, 480
Msp20I TGGCCA 1 cut(s) 341
MspA1I CMGCKG 1 cut(s) 237
MspI CCGG 1 cut(s) 376
MspR9I CCNGG 1 cut(s) 376
Mva1269I GAATGC 1 cut(s) 124
MwoI GCNNNNNNNGC 4 cut(s) 119, 141, 391, 517
NciI CCSGG 1 cut(s) 376
NdeI CATATG 1 cut(s) 356
NdeII GATC 1 cut(s) 421
NlaIII CATG 4 cut(s) 50, 109, 152, 434
NlaIV GGNNCC 1 cut(s) 373
NmeAIII GCCGAG 1 cut(s) 537
NspI RCATGY 1 cut(s) 109
PcsI WCGNNNNNNNCGW 1 cut(s) 449
PctI GAATGC 1 cut(s) 124
PkrI GCNGC 2 cut(s) 469, 618
PspFI CCCAGC 1 cut(s) 502
PspN4I GGNNCC 1 cut(s) 373
PstNI CAGNNNCTG 1 cut(s) 317
RsaI GTAC 2 cut(s) 329, 635
RsaNI GTAC 2 cut(s) 328, 634
RseI CAYNNNNRTG 2 cut(s) 51, 480
SaqAI TTAA 1 cut(s) 446
SatI GCNGC 2 cut(s) 468, 617
Sau3AI GATC 1 cut(s) 421
ScrFI CCNGG 1 cut(s) 376
SduI GDGCHC 1 cut(s) 376
SetI ASST 5 cut(s) 30, 305, 326, 347, 472
SfaNI GCATC 3 cut(s) 288, 372, 616
SmiMI CAYNNNNRTG 2 cut(s) 51, 480
SsiI CCGC 2 cut(s) 142, 235
SspI AATATT 1 cut(s) 101
SspMI CTAG 1 cut(s) 639
StyD4I CCNGG 1 cut(s) 374
TaiI ACGT 1 cut(s) 347
TaqI TCGA 1 cut(s) 231
TatI WGTACW 2 cut(s) 327, 633
Tru1I TTAA 1 cut(s) 446
Tru9I TTAA 1 cut(s) 446
TscAI CASTG 3 cut(s) 46, 91, 301
TseI GCWGC 2 cut(s) 467, 616
TspDTI ATGAA 1 cut(s) 244
TspRI CASTG 3 cut(s) 46, 91, 301
XbaI TCTAGA 1 cut(s) 638
XceI RCATGY 1 cut(s) 109
XspI CTAG 1 cut(s) 639
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.