Protein of unknown function (DUF679)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1044200.v1.1 |
| prunus_persica | Prupe.8G050700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0272601 RchiOBHm_Chr6g0272621 RchiOBHm_Chr6g0272661 RchiOBHm_Chr6g0272721 RchiOBHm_Chr6g0273491 |
| rosa_laevigata | RLG00000013662 |
| rosa_multiflora | Rmu_sc0010380.1_g000012 Rmu_sc0022055.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00015990 Rroxscaffold_7G00196080 |
| rosa_rugosa | Rorug06G0070100 |
| rosa_samantha | Rh6AG190500 Rh6BG194000 Rh6CG193500 Rh6DG179600 Rh6DG179700 Rh6DG185100 |
| rosa_wichuraiana | Rw6G016670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 410 |
| AclWI | GGATC | 1 cut(s) | 479 |
| AcoI | YGGCCR | 1 cut(s) | 335 |
| AcsI | RAATTY | 2 cut(s) | 350, 549 |
| AcuI | CTGAAG | 2 cut(s) | 211, 590 |
| AfaI | GTAC | 2 cut(s) | 103, 587 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 490, 543 |
| AgsI | TTSAA | 2 cut(s) | 74, 363 |
| AjnI | CCWGG | 1 cut(s) | 454 |
| AluBI | AGCT | 1 cut(s) | 299 |
| AluI | AGCT | 1 cut(s) | 299 |
| Alw26I | GTCTC | 1 cut(s) | 146 |
| AlwI | GGATC | 1 cut(s) | 479 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 234 |
| AoxI | GGCC | 1 cut(s) | 335 |
| ApeKI | GCWGC | 1 cut(s) | 265 |
| ApoI | RAATTY | 2 cut(s) | 350, 549 |
| AsuHPI | GGTGA | 3 cut(s) | 65, 172, 466 |
| BalI | TGGCCA | 1 cut(s) | 337 |
| BbvI | GCAGC | 1 cut(s) | 277 |
| BccI | CCATC | 3 cut(s) | 44, 203, 235 |
| BciT130I | CCWGG | 1 cut(s) | 456 |
| BcoDI | GTCTC | 1 cut(s) | 146 |
| BfaI | CTAG | 1 cut(s) | 591 |
| BfmI | CTRYAG | 2 cut(s) | 159, 263 |
| BfuAI | ACCTGC | 1 cut(s) | 410 |
| BglII | AGATCT | 1 cut(s) | 373 |
| BisI | GCNGC | 1 cut(s) | 266 |
| BlsI | GCNGC | 1 cut(s) | 267 |
| Bme1390I | CCNGG | 1 cut(s) | 456 |
| BmrFI | CCNGG | 1 cut(s) | 456 |
| BmsI | GCATC | 3 cut(s) | 284, 395, 568 |
| BsaAI | YACGTR | 1 cut(s) | 105 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 490, 543 |
| Bse1I | ACTGG | 1 cut(s) | 239 |
| BseBI | CCWGG | 1 cut(s) | 456 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 490, 543 |
| BseNI | ACTGG | 1 cut(s) | 239 |
| BseRI | GAGGAG | 1 cut(s) | 183 |
| BseXI | GCAGC | 1 cut(s) | 277 |
| BshFI | GGCC | 1 cut(s) | 337 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 490, 543 |
| BsmAI | GTCTC | 1 cut(s) | 146 |
| BsmI | GAATGC | 1 cut(s) | 465 |
| BsnI | GGCC | 1 cut(s) | 337 |
| Bsp143I | GATC | 2 cut(s) | 373, 471 |
| BspANI | GGCC | 1 cut(s) | 337 |
| BspMAI | CTGCAG | 1 cut(s) | 267 |
| BspMI | ACCTGC | 1 cut(s) | 410 |
| BspPI | GGATC | 1 cut(s) | 479 |
| BsrI | ACTGG | 1 cut(s) | 239 |
| BssMI | GATC | 2 cut(s) | 373, 471 |
| Bst2UI | CCWGG | 1 cut(s) | 456 |
| Bst4CI | ACNGT | 2 cut(s) | 38, 47 |
| Bst6I | CTCTTC | 2 cut(s) | 383, 566 |
| BstBAI | YACGTR | 1 cut(s) | 105 |
| BstDEI | CTNAG | 1 cut(s) | 465 |
| BstKTI | GATC | 2 cut(s) | 376, 474 |
| BstMAI | GTCTC | 1 cut(s) | 146 |
| BstMBI | GATC | 2 cut(s) | 373, 471 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 262 |
| BstNI | CCWGG | 1 cut(s) | 456 |
| BstNSI | RCATGY | 2 cut(s) | 141, 321 |
| BstSCI | CCNGG | 1 cut(s) | 454 |
| BstSFI | CTRYAG | 2 cut(s) | 159, 263 |
| BstSNI | TACGTA | 1 cut(s) | 105 |
| BstV1I | GCAGC | 1 cut(s) | 277 |
| BstX2I | RGATCY | 1 cut(s) | 373 |
| BstYI | RGATCY | 1 cut(s) | 373 |
| BsuRI | GGCC | 1 cut(s) | 337 |
| BtsI | GCAGTG | 1 cut(s) | 132 |
| BtsIMutI | CAGTG | 7 cut(s) | 43, 52, 84, 132, 219, 232, 290 |
| BveI | ACCTGC | 1 cut(s) | 410 |
| CaiI | CAGNNNCTG | 1 cut(s) | 234 |
| CseI | GACGC | 1 cut(s) | 257 |
| Csp6I | GTAC | 2 cut(s) | 102, 586 |
| CviAII | CATG | 5 cut(s) | 20, 138, 253, 318, 383 |
| CviJI | RGCY | 5 cut(s) | 164, 231, 238, 299, 337 |
| CviKI_1 | RGCY | 5 cut(s) | 164, 231, 238, 299, 337 |
| CviQI | GTAC | 2 cut(s) | 102, 586 |
| DdeI | CTNAG | 1 cut(s) | 465 |
| DpnI | GATC | 2 cut(s) | 375, 473 |
| DpnII | GATC | 2 cut(s) | 373, 471 |
| DraI | TTTAAA | 1 cut(s) | 303 |
| EaeI | YGGCCR | 1 cut(s) | 335 |
| Eam1104I | CTCTTC | 2 cut(s) | 383, 566 |
| EarI | CTCTTC | 2 cut(s) | 383, 566 |
| Eco105I | TACGTA | 1 cut(s) | 105 |
| Eco57I | CTGAAG | 2 cut(s) | 211, 590 |
| EcoRII | CCWGG | 1 cut(s) | 454 |
| EcoT22I | ATGCAT | 1 cut(s) | 388 |
| FaeI | CATG | 5 cut(s) | 23, 141, 256, 321, 386 |
| FatI | CATG | 5 cut(s) | 19, 137, 252, 317, 382 |
| FauNDI | CATATG | 1 cut(s) | 215 |
| Fnu4HI | GCNGC | 1 cut(s) | 266 |
| Fsp4HI | GCNGC | 1 cut(s) | 266 |
| FspBI | CTAG | 1 cut(s) | 591 |
| GluI | GCNGC | 1 cut(s) | 266 |
| HaeIII | GGCC | 1 cut(s) | 337 |
| HgaI | GACGC | 1 cut(s) | 257 |
| Hin1II | CATG | 5 cut(s) | 23, 141, 256, 321, 386 |
| HinfI | GANTC | 2 cut(s) | 8, 92 |
| HphI | GGTGA | 3 cut(s) | 65, 172, 466 |
| Hpy166II | GTNNAC | 2 cut(s) | 41, 425 |
| Hpy188III | TCNNGA | 2 cut(s) | 112, 591 |
| Hpy8I | GTNNAC | 2 cut(s) | 41, 425 |
| Hpy99I | CGWCG | 1 cut(s) | 315 |
| HpyAV | CCTTC | 3 cut(s) | 526, 537, 543 |
| HpyCH4III | ACNGT | 2 cut(s) | 38, 47 |
| HpyCH4IV | ACGT | 1 cut(s) | 104 |
| HpyCH4V | TGCA | 6 cut(s) | 137, 219, 265, 275, 386, 419 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 262 |
| HpyF3I | CTNAG | 1 cut(s) | 465 |
| HpySE526I | ACGT | 1 cut(s) | 104 |
| Hsp92II | CATG | 5 cut(s) | 23, 141, 256, 321, 386 |
| Kzo9I | GATC | 2 cut(s) | 373, 471 |
| LmnI | GCTCC | 1 cut(s) | 196 |
| Lsp1109I | GCAGC | 1 cut(s) | 277 |
| LweI | GCATC | 3 cut(s) | 284, 395, 568 |
| MaeI | CTAG | 1 cut(s) | 591 |
| MaeII | ACGT | 1 cut(s) | 104 |
| MalI | GATC | 2 cut(s) | 375, 473 |
| MboI | GATC | 2 cut(s) | 373, 471 |
| MboII | GAAGA | 5 cut(s) | 86, 241, 370, 504, 583 |
| MflI | RGATCY | 1 cut(s) | 373 |
| MlsI | TGGCCA | 1 cut(s) | 337 |
| MluCI | AATT | 4 cut(s) | 168, 186, 350, 549 |
| MluNI | TGGCCA | 1 cut(s) | 337 |
| MlyI | GAGTC | 1 cut(s) | 2 |
| MnlI | CCTC | 2 cut(s) | 204, 462 |
| Mox20I | TGGCCA | 1 cut(s) | 337 |
| Mph1103I | ATGCAT | 1 cut(s) | 388 |
| MscI | TGGCCA | 1 cut(s) | 337 |
| MseI | TTAA | 3 cut(s) | 125, 302, 598 |
| MslI | CAYNNNNRTG | 2 cut(s) | 48, 432 |
| Msp20I | TGGCCA | 1 cut(s) | 337 |
| MspR9I | CCNGG | 1 cut(s) | 456 |
| Mva1269I | GAATGC | 1 cut(s) | 465 |
| MvaI | CCWGG | 1 cut(s) | 456 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 262 |
| NdeI | CATATG | 1 cut(s) | 215 |
| NdeII | GATC | 2 cut(s) | 373, 471 |
| NlaIII | CATG | 5 cut(s) | 23, 141, 256, 321, 386 |
| NsiI | ATGCAT | 1 cut(s) | 388 |
| NspI | RCATGY | 2 cut(s) | 141, 321 |
| PctI | GAATGC | 1 cut(s) | 465 |
| PfeI | GAWTC | 1 cut(s) | 92 |
| PfoI | TCCNGGA | 1 cut(s) | 454 |
| PkrI | GCNGC | 1 cut(s) | 267 |
| PleI | GAGTC | 1 cut(s) | 2 |
| PpsI | GAGTC | 1 cut(s) | 2 |
| Ppu21I | YACGTR | 1 cut(s) | 105 |
| Psp6I | CCWGG | 1 cut(s) | 454 |
| PspGI | CCWGG | 1 cut(s) | 454 |
| PstI | CTGCAG | 1 cut(s) | 267 |
| PstNI | CAGNNNCTG | 1 cut(s) | 234 |
| PsuI | RGATCY | 1 cut(s) | 373 |
| RsaI | GTAC | 2 cut(s) | 103, 587 |
| RsaNI | GTAC | 2 cut(s) | 102, 586 |
| RseI | CAYNNNNRTG | 2 cut(s) | 48, 432 |
| SaqAI | TTAA | 3 cut(s) | 125, 302, 598 |
| SatI | GCNGC | 1 cut(s) | 266 |
| Sau3AI | GATC | 2 cut(s) | 373, 471 |
| SchI | GAGTC | 1 cut(s) | 2 |
| ScrFI | CCNGG | 1 cut(s) | 456 |
| SetI | ASST | 6 cut(s) | 27, 107, 160, 301, 424, 486 |
| SfaNI | GCATC | 3 cut(s) | 284, 395, 568 |
| SfcI | CTRYAG | 2 cut(s) | 159, 263 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 48, 432 |
| SnaBI | TACGTA | 1 cut(s) | 105 |
| Sse9I | AATT | 4 cut(s) | 168, 186, 350, 549 |
| SspI | AATATT | 1 cut(s) | 123 |
| SspMI | CTAG | 1 cut(s) | 591 |
| StyD4I | CCNGG | 1 cut(s) | 454 |
| TaaI | ACNGT | 2 cut(s) | 38, 47 |
| TaiI | ACGT | 1 cut(s) | 107 |
| TasI | AATT | 4 cut(s) | 168, 186, 350, 549 |
| TatI | WGTACW | 1 cut(s) | 585 |
| TfiI | GAWTC | 1 cut(s) | 92 |
| Tru1I | TTAA | 3 cut(s) | 125, 302, 598 |
| Tru9I | TTAA | 3 cut(s) | 125, 302, 598 |
| TscAI | CASTG | 7 cut(s) | 43, 52, 91, 139, 226, 239, 297 |
| TseI | GCWGC | 1 cut(s) | 265 |
| TspDTI | ATGAA | 2 cut(s) | 105, 241 |
| TspRI | CASTG | 7 cut(s) | 43, 52, 91, 139, 226, 239, 297 |
| XapI | RAATTY | 2 cut(s) | 350, 549 |
| XbaI | TCTAGA | 1 cut(s) | 590 |
| XceI | RCATGY | 2 cut(s) | 141, 321 |
| XspI | CTAG | 1 cut(s) | 591 |
| Zsp2I | ATGCAT | 1 cut(s) | 388 |