Protein of unknown function (DUF679)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1044200.v1.1 |
| prunus_persica | Prupe.8G050700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0272601 RchiOBHm_Chr6g0272621 RchiOBHm_Chr6g0272661 RchiOBHm_Chr6g0272721 RchiOBHm_Chr6g0273491 |
| rosa_laevigata | RLG00000013662 |
| rosa_multiflora | Rmu_sc0010380.1_g000012 Rmu_sc0022055.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00015990 Rroxscaffold_7G00196080 |
| rosa_rugosa | Rorug06G0070100 |
| rosa_samantha | Rh6AG190500 Rh6BG194000 Rh6CG193500 Rh6DG179600 Rh6DG179700 Rh6DG185100 |
| rosa_wichuraiana | Rw6G016670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 454 |
| AcuI | CTGAAG | 2 cut(s) | 210, 433 |
| AfaI | GTAC | 1 cut(s) | 189 |
| AgsI | TTSAA | 1 cut(s) | 119 |
| AjiI | CACGTC | 1 cut(s) | 362 |
| AluBI | AGCT | 1 cut(s) | 141 |
| AluI | AGCT | 1 cut(s) | 141 |
| Alw21I | GWGCWC | 1 cut(s) | 143 |
| Alw26I | GTCTC | 1 cut(s) | 368 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 456 |
| Ama87I | CYCGRG | 1 cut(s) | 93 |
| AoxI | GGCC | 1 cut(s) | 253 |
| ApeKI | GCWGC | 2 cut(s) | 98, 101 |
| AspLEI | GCGC | 1 cut(s) | 443 |
| AsuHPI | GGTGA | 5 cut(s) | 55, 190, 290, 296, 394 |
| AvaI | CYCGRG | 1 cut(s) | 93 |
| BanII | GRGCYC | 1 cut(s) | 143 |
| Bbv12I | GWGCWC | 1 cut(s) | 143 |
| BbvI | GCAGC | 2 cut(s) | 110, 113 |
| BccI | CCATC | 5 cut(s) | 23, 210, 257, 275, 425 |
| BclI | TGATCA | 1 cut(s) | 286 |
| BcoDI | GTCTC | 1 cut(s) | 368 |
| BisI | GCNGC | 3 cut(s) | 99, 102, 454 |
| BlsI | GCNGC | 3 cut(s) | 100, 103, 455 |
| BmcAI | AGTACT | 1 cut(s) | 189 |
| BmeT110I | CYCGRG | 1 cut(s) | 93 |
| BmgBI | CACGTC | 1 cut(s) | 362 |
| BmsI | GCATC | 2 cut(s) | 58, 79 |
| BsaBI | GATNNNNATC | 1 cut(s) | 285 |
| BsaJI | CCNNGG | 1 cut(s) | 250 |
| Bse8I | GATNNNNATC | 1 cut(s) | 285 |
| BseDI | CCNNGG | 1 cut(s) | 250 |
| BseGI | GGATG | 4 cut(s) | 73, 94, 151, 241 |
| BseJI | GATNNNNATC | 1 cut(s) | 285 |
| BseXI | GCAGC | 2 cut(s) | 110, 113 |
| BsgI | GTGCAG | 1 cut(s) | 342 |
| BshFI | GGCC | 1 cut(s) | 255 |
| BsiHKAI | GWGCWC | 1 cut(s) | 143 |
| BsiHKCI | CYCGRG | 1 cut(s) | 93 |
| BsmAI | GTCTC | 1 cut(s) | 368 |
| BsmBI | CGTCTC | 1 cut(s) | 368 |
| BsnI | GGCC | 1 cut(s) | 255 |
| BsoBI | CYCGRG | 1 cut(s) | 93 |
| Bsp1286I | GDGCHC | 1 cut(s) | 143 |
| Bsp143I | GATC | 1 cut(s) | 286 |
| Bsp19I | CCATGG | 1 cut(s) | 250 |
| BspACI | CCGC | 1 cut(s) | 454 |
| BspANI | GGCC | 1 cut(s) | 255 |
| BspQI | GCTCTTC | 1 cut(s) | 131 |
| BssECI | CCNNGG | 1 cut(s) | 250 |
| BssMI | GATC | 1 cut(s) | 286 |
| BssT1I | CCWWGG | 1 cut(s) | 250 |
| Bst4CI | ACNGT | 2 cut(s) | 9, 36 |
| Bst6I | CTCTTC | 3 cut(s) | 114, 131, 229 |
| BstDEI | CTNAG | 1 cut(s) | 19 |
| BstDSI | CCRYGG | 1 cut(s) | 250 |
| BstF5I | GGATG | 4 cut(s) | 73, 94, 151, 241 |
| BstHHI | GCGC | 1 cut(s) | 443 |
| BstKTI | GATC | 1 cut(s) | 289 |
| BstMAI | GTCTC | 1 cut(s) | 368 |
| BstMBI | GATC | 1 cut(s) | 286 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 20, 98 |
| BstNSI | RCATGY | 1 cut(s) | 441 |
| BstV1I | GCAGC | 2 cut(s) | 110, 113 |
| BsuRI | GGCC | 1 cut(s) | 255 |
| BtgI | CCRYGG | 1 cut(s) | 250 |
| BtrI | CACGTC | 1 cut(s) | 362 |
| BtsCI | GGATG | 4 cut(s) | 73, 94, 151, 241 |
| BtsI | GCAGTG | 1 cut(s) | 354 |
| BtsIMutI | CAGTG | 2 cut(s) | 315, 354 |
| CaiI | CAGNNNCTG | 1 cut(s) | 456 |
| CfoI | GCGC | 1 cut(s) | 443 |
| Csp6I | GTAC | 1 cut(s) | 188 |
| CviAII | CATG | 3 cut(s) | 251, 275, 438 |
| CviJI | RGCY | 5 cut(s) | 54, 141, 255, 386, 453 |
| CviKI_1 | RGCY | 5 cut(s) | 54, 141, 255, 386, 453 |
| CviQI | GTAC | 1 cut(s) | 188 |
| DdeI | CTNAG | 1 cut(s) | 19 |
| DpnI | GATC | 1 cut(s) | 288 |
| DpnII | GATC | 1 cut(s) | 286 |
| DraI | TTTAAA | 1 cut(s) | 304 |
| Eam1104I | CTCTTC | 3 cut(s) | 114, 131, 229 |
| EarI | CTCTTC | 3 cut(s) | 114, 131, 229 |
| Ecl136II | GAGCTC | 1 cut(s) | 141 |
| Eco130I | CCWWGG | 1 cut(s) | 250 |
| Eco24I | GRGCYC | 1 cut(s) | 143 |
| Eco53kI | GAGCTC | 1 cut(s) | 141 |
| Eco57I | CTGAAG | 2 cut(s) | 210, 433 |
| Eco88I | CYCGRG | 1 cut(s) | 93 |
| EcoICRI | GAGCTC | 1 cut(s) | 141 |
| EcoT14I | CCWWGG | 1 cut(s) | 250 |
| EcoT38I | GRGCYC | 1 cut(s) | 143 |
| ErhI | CCWWGG | 1 cut(s) | 250 |
| Esp3I | CGTCTC | 1 cut(s) | 368 |
| FaeI | CATG | 3 cut(s) | 254, 278, 441 |
| FaiI | YATR | 9 cut(s) | 74, 83, 252, 276, 335, 339, 344, 407, 439 |
| FatI | CATG | 3 cut(s) | 250, 274, 437 |
| FbaI | TGATCA | 1 cut(s) | 286 |
| Fnu4HI | GCNGC | 3 cut(s) | 99, 102, 454 |
| FokI | GGATG | 4 cut(s) | 80, 101, 158, 248 |
| FriOI | GRGCYC | 1 cut(s) | 143 |
| Fsp4HI | GCNGC | 3 cut(s) | 99, 102, 454 |
| GlaI | GCGC | 1 cut(s) | 442 |
| GluI | GCNGC | 3 cut(s) | 99, 102, 454 |
| HaeIII | GGCC | 1 cut(s) | 255 |
| HhaI | GCGC | 1 cut(s) | 443 |
| Hin1II | CATG | 3 cut(s) | 254, 278, 441 |
| Hin6I | GCGC | 1 cut(s) | 441 |
| HinP1I | GCGC | 1 cut(s) | 441 |
| HinfI | GANTC | 3 cut(s) | 181, 239, 323 |
| HphI | GGTGA | 5 cut(s) | 55, 190, 290, 296, 394 |
| Hpy166II | GTNNAC | 1 cut(s) | 272 |
| Hpy188I | TCNGA | 2 cut(s) | 145, 229 |
| Hpy8I | GTNNAC | 1 cut(s) | 272 |
| HpyAV | CCTTC | 1 cut(s) | 34 |
| HpyCH4III | ACNGT | 2 cut(s) | 9, 36 |
| HpyCH4IV | ACGT | 1 cut(s) | 361 |
| HpyCH4V | TGCA | 1 cut(s) | 359 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 20, 98 |
| HpyF3I | CTNAG | 1 cut(s) | 19 |
| HpySE526I | ACGT | 1 cut(s) | 361 |
| Hsp92II | CATG | 3 cut(s) | 254, 278, 441 |
| HspAI | GCGC | 1 cut(s) | 441 |
| Ksp22I | TGATCA | 1 cut(s) | 286 |
| Kzo9I | GATC | 1 cut(s) | 286 |
| LguI | GCTCTTC | 1 cut(s) | 131 |
| LmnI | GCTCC | 1 cut(s) | 418 |
| LpnPI | CCDG | 1 cut(s) | 429 |
| Lsp1109I | GCAGC | 2 cut(s) | 110, 113 |
| LweI | GCATC | 2 cut(s) | 58, 79 |
| MaeII | ACGT | 1 cut(s) | 361 |
| MalI | GATC | 1 cut(s) | 288 |
| MboI | GATC | 1 cut(s) | 286 |
| MboII | GAAGA | 3 cut(s) | 131, 148, 216 |
| MhlI | GDGCHC | 1 cut(s) | 143 |
| MluCI | AATT | 1 cut(s) | 258 |
| MlyI | GAGTC | 1 cut(s) | 233 |
| MnlI | CCTC | 2 cut(s) | 115, 232 |
| MseI | TTAA | 1 cut(s) | 303 |
| MslI | CAYNNNNRTG | 1 cut(s) | 279 |
| MspA1I | CMGCKG | 1 cut(s) | 456 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 20, 98 |
| NcoI | CCATGG | 1 cut(s) | 250 |
| NdeII | GATC | 1 cut(s) | 286 |
| NlaIII | CATG | 3 cut(s) | 254, 278, 441 |
| NspI | RCATGY | 1 cut(s) | 441 |
| PciSI | GCTCTTC | 1 cut(s) | 131 |
| PfeI | GAWTC | 2 cut(s) | 181, 323 |
| PkrI | GCNGC | 3 cut(s) | 100, 103, 455 |
| PleI | GAGTC | 1 cut(s) | 233 |
| PpsI | GAGTC | 1 cut(s) | 233 |
| Psp124BI | GAGCTC | 1 cut(s) | 143 |
| PstNI | CAGNNNCTG | 1 cut(s) | 456 |
| RsaI | GTAC | 1 cut(s) | 189 |
| RsaNI | GTAC | 1 cut(s) | 188 |
| RseI | CAYNNNNRTG | 1 cut(s) | 279 |
| SacI | GAGCTC | 1 cut(s) | 143 |
| SapI | GCTCTTC | 1 cut(s) | 131 |
| SaqAI | TTAA | 1 cut(s) | 303 |
| SatI | GCNGC | 3 cut(s) | 99, 102, 454 |
| Sau3AI | GATC | 1 cut(s) | 286 |
| ScaI | AGTACT | 1 cut(s) | 189 |
| SchI | GAGTC | 1 cut(s) | 233 |
| SduI | GDGCHC | 1 cut(s) | 143 |
| SetI | ASST | 5 cut(s) | 45, 114, 143, 364, 382 |
| SfaNI | GCATC | 2 cut(s) | 58, 79 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 279 |
| Sse9I | AATT | 1 cut(s) | 258 |
| SsiI | CCGC | 1 cut(s) | 454 |
| SstI | GAGCTC | 1 cut(s) | 143 |
| StyI | CCWWGG | 1 cut(s) | 250 |
| TaaI | ACNGT | 2 cut(s) | 9, 36 |
| TaiI | ACGT | 1 cut(s) | 364 |
| TasI | AATT | 1 cut(s) | 258 |
| TatI | WGTACW | 1 cut(s) | 187 |
| TauI | GCSGC | 1 cut(s) | 456 |
| TfiI | GAWTC | 2 cut(s) | 181, 323 |
| Tru1I | TTAA | 1 cut(s) | 303 |
| Tru9I | TTAA | 1 cut(s) | 303 |
| TscAI | CASTG | 2 cut(s) | 322, 361 |
| TseI | GCWGC | 2 cut(s) | 98, 101 |
| TspDTI | ATGAA | 2 cut(s) | 17, 336 |
| TspRI | CASTG | 2 cut(s) | 322, 361 |
| XceI | RCATGY | 1 cut(s) | 441 |
| ZrmI | AGTACT | 1 cut(s) | 189 |