Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0014045

Physical Location & Seq

Genomic Coordinates Reverse (-)

12382546 .. 12383833

Gene Structure 1288 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G091000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 621 bp

ATGGCTCAAATTCGTGACGAGTATGGAAACCTAGTGCAGCTCACAGATGAGCATGGCAACCCTGTTGAGTTGACAGACGAGCATGGAAACCCTATGCACCTCACGGGTGTAGCTACTAGCACGGAAGCCGAAACCGGAACATACACCGGTTCCGGTGTGCATGTTCCAGGATCCGGGACCACGGGTGGGTACGAGGAGCATGGTGGCGCGTTGGGTGGCGCTGGAGTTGCGACCGGGCTTGGAATGTTTGGTGATAAACAAACAAGTGATCAACCTCATGGGTATGATGGTGGTCTCGGTGAGCACCGACAACAACAGCCCCACGACGGTGGTGTTACTGGTGAAGCCCGCCGTTCTGGCAGCTCATCAAGCTCTAGTTCCGAGGATGATGGGCAAGGTGGGAGAAGGAAGAAGAAGGGACTGAAGGAGAAAATAAAGGAAAAATTGACCGGTGGGAAGCACAAGGACGACGCTCAGCAGCAAGCATATGGACAAGAGCAAGGACAGACACACACCATAGCCGTTGGCACTGCCATCACAACCACAGCGACAACTGAGCCGGAGAAGAGGAGTATGATGGAGAAGATCAAGGACAAGCTGCCTGGTCATCACAGCCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009631 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0033993 GO:0042221 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dehydrin

Protein Analysis

207

Amino Acids

21.6

Weight (kDa)

5.88

Isoelectric Point (pI)

36.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014045)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21490 AT4G39130
fragaria_vesca	FvH4_2g09610
malus_domestica	MD10G1069000.v1.1
prunus_persica	Prupe.8G091000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0265971
rosa_laevigata	RLG00000014143
rosa_multiflora	Rmu_co8443205.1_g000001 Rmu_sc0013338.1_g000002
rosa_roxburghii	Rroxscaffold_7G00202180
rosa_rugosa	Rorug06G0021900
rosa_samantha	Rh6AG143200 Rh6BG143500 Rh6CG140100 Rh6DG127800
rosa_wichuraiana	Rw0G015570 Rw6G012380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	209
AciI	CCGC	1 cut(s)	349
AclWI	GGATC	2 cut(s)	165, 178
AcsI	RAATTY	1 cut(s)	9
AcuI	CTGAAG	1 cut(s)	443
AfaI	GTAC	1 cut(s)	191
AfiI	CCNNNNNNNGG	3 cut(s)	173, 186, 326
AgeI	ACCGGT	2 cut(s)	146, 449
AjnI	CCWGG	2 cut(s)	166, 601
AleI	CACNNNNGTG	1 cut(s)	327
AluBI	AGCT	5 cut(s)	40, 113, 363, 372, 598
AluI	AGCT	5 cut(s)	40, 113, 363, 372, 598
Alw21I	GWGCWC	1 cut(s)	306
Alw26I	GTCTC	1 cut(s)	299
AlwI	GGATC	2 cut(s)	165, 178
ApeKI	GCWGC	4 cut(s)	37, 360, 478, 598
ApoI	RAATTY	1 cut(s)	9
AsiGI	ACCGGT	2 cut(s)	146, 449
AspLEI	GCGC	2 cut(s)	209, 221
AspS9I	GGNCC	1 cut(s)	177
AsuC2I	CCSGG	2 cut(s)	175, 235
AsuHPI	GGTGA	3 cut(s)	263, 311, 353
AvaII	GGWCC	1 cut(s)	177
BamHI	GGATCC	1 cut(s)	170
Bbv12I	GWGCWC	1 cut(s)	306
BbvI	GCAGC	4 cut(s)	49, 372, 490, 585
BccI	CCATC	4 cut(s)	281, 383, 542, 571
BceAI	ACGGC	2 cut(s)	336, 506
BciT130I	CCWGG	2 cut(s)	168, 603
BclI	TGATCA	1 cut(s)	268
BcnI	CCSGG	2 cut(s)	175, 235
BcoDI	GTCTC	1 cut(s)	299
BfaI	CTAG	3 cut(s)	32, 117, 375
BfoI	RGCGCY	1 cut(s)	222
BglI	GCCNNNNNGGC	1 cut(s)	357
BisI	GCNGC	4 cut(s)	38, 361, 479, 599
BlpI	GCTNAGC	1 cut(s)	474
BlsI	GCNGC	4 cut(s)	39, 362, 480, 600
Bme1390I	CCNGG	4 cut(s)	168, 175, 235, 603
Bme18I	GGWCC	1 cut(s)	177
BmgT120I	GGNCC	1 cut(s)	177
BmiI	GGNNCC	3 cut(s)	151, 172, 178
BmrFI	CCNGG	4 cut(s)	168, 175, 235, 603
BpmI	CTGGAG	1 cut(s)	243
Bpu1102I	GCTNAGC	1 cut(s)	474
BpuMI	CCSGG	2 cut(s)	175, 235
BsaI	GGTCTC	1 cut(s)	299
BsaJI	CCNNGG	2 cut(s)	180, 381
BsaWI	WCCGGW	4 cut(s)	134, 146, 152, 449
Bsc4I	CCNNNNNNNGG	3 cut(s)	173, 186, 326
Bse118I	RCCGGY	2 cut(s)	146, 449
Bse1I	ACTGG	1 cut(s)	343
BseBI	CCWGG	2 cut(s)	168, 603
BseDI	CCNNGG	2 cut(s)	180, 381
BseGI	GGATG	1 cut(s)	391
BseLI	CCNNNNNNNGG	3 cut(s)	173, 186, 326
BseMII	CTCAG	2 cut(s)	488, 546
BseNI	ACTGG	1 cut(s)	343
BseRI	GAGGAG	2 cut(s)	209, 583
BseXI	GCAGC	4 cut(s)	49, 372, 490, 585
BsgI	GTGCAG	1 cut(s)	56
Bsh1236I	CGCG	1 cut(s)	209
Bsh1285I	CGRYCG	1 cut(s)	234
BshTI	ACCGGT	2 cut(s)	146, 449
BsiEI	CGRYCG	1 cut(s)	234
BsiHKAI	GWGCWC	1 cut(s)	306
BsiSI	CCGG	7 cut(s)	135, 147, 153, 174, 234, 450, 560
BslFI	GGGAC	2 cut(s)	190, 432
BslI	CCNNNNNNNGG	3 cut(s)	173, 186, 326
BsmAI	GTCTC	1 cut(s)	299
BsmFI	GGGAC	2 cut(s)	190, 432
Bso31I	GGTCTC	1 cut(s)	299
Bsp1286I	GDGCHC	1 cut(s)	306
Bsp143I	GATC	3 cut(s)	170, 268, 585
Bsp1720I	GCTNAGC	1 cut(s)	474
BspACI	CCGC	1 cut(s)	349
BspCNI	CTCAG	2 cut(s)	487, 547
BspFNI	CGCG	1 cut(s)	209
BspLI	GGNNCC	3 cut(s)	151, 172, 178
BspPI	GGATC	2 cut(s)	165, 178
BspTNI	GGTCTC	1 cut(s)	299
BsrFI	RCCGGY	2 cut(s)	146, 449
BsrI	ACTGG	1 cut(s)	343
BssAI	RCCGGY	2 cut(s)	146, 449
BssECI	CCNNGG	2 cut(s)	180, 381
BssMI	GATC	3 cut(s)	170, 268, 585
Bst2UI	CCWGG	2 cut(s)	168, 603
Bst4CI	ACNGT	1 cut(s)	329
Bst6I	CTCTTC	1 cut(s)	560
BstC8I	GCNNGC	2 cut(s)	349, 483
BstDEI	CTNAG	2 cut(s)	474, 555
BstDSI	CCRYGG	1 cut(s)	180
BstF5I	GGATG	1 cut(s)	391
BstFNI	CGCG	1 cut(s)	209
BstH2I	RGCGCY	1 cut(s)	222
BstHHI	GCGC	2 cut(s)	209, 221
BstKTI	GATC	3 cut(s)	173, 271, 588
BstMAI	GTCTC	1 cut(s)	299
BstMBI	GATC	3 cut(s)	170, 268, 585
BstMCI	CGRYCG	1 cut(s)	234
BstMWI	GCNNNNNNNGC	3 cut(s)	227, 357, 369
BstNI	CCWGG	2 cut(s)	168, 603
BstNSI	RCATGY	1 cut(s)	164
BstSCI	CCNGG	4 cut(s)	166, 173, 233, 601
BstUI	CGCG	1 cut(s)	209
BstV1I	GCAGC	4 cut(s)	49, 372, 490, 585
BstX2I	RGATCY	1 cut(s)	170
BstXI	CCANNNNNNTGG	1 cut(s)	329
BstYI	RGATCY	1 cut(s)	170
BtgI	CCRYGG	1 cut(s)	180
BtsCI	GGATG	1 cut(s)	391
BtsI	GCAGTG	1 cut(s)	528
BtsIMutI	CAGTG	1 cut(s)	528
Cac8I	GCNNGC	2 cut(s)	349, 483
CfoI	GCGC	2 cut(s)	209, 221
Cfr10I	RCCGGY	2 cut(s)	146, 449
Cfr13I	GGNCC	1 cut(s)	177
CseI	GACGC	1 cut(s)	479
Csp6I	GTAC	1 cut(s)	190
CspAI	ACCGGT	2 cut(s)	146, 449
CviAII	CATG	5 cut(s)	53, 83, 161, 200, 278
CviQI	GTAC	1 cut(s)	190
DdeI	CTNAG	2 cut(s)	474, 555
DpnI	GATC	3 cut(s)	172, 270, 587
DpnII	GATC	3 cut(s)	170, 268, 585
Eam1104I	CTCTTC	1 cut(s)	560
EarI	CTCTTC	1 cut(s)	560
Eco31I	GGTCTC	1 cut(s)	299
Eco47I	GGWCC	1 cut(s)	177
Eco57I	CTGAAG	1 cut(s)	443
EcoRII	CCWGG	2 cut(s)	166, 601
FaeI	CATG	5 cut(s)	56, 86, 164, 203, 281
FaqI	GGGAC	2 cut(s)	190, 432
FatI	CATG	5 cut(s)	52, 82, 160, 199, 277
FauI	CCCGC	1 cut(s)	356
FauNDI	CATATG	1 cut(s)	487
FbaI	TGATCA	1 cut(s)	268
Fnu4HI	GCNGC	4 cut(s)	38, 361, 479, 599
FokI	GGATG	1 cut(s)	398
Fsp4HI	GCNGC	4 cut(s)	38, 361, 479, 599
FspBI	CTAG	3 cut(s)	32, 117, 375
GlaI	GCGC	2 cut(s)	208, 220
GluI	GCNGC	4 cut(s)	38, 361, 479, 599
GsuI	CTGGAG	1 cut(s)	243
HaeII	RGCGCY	1 cut(s)	222
HapII	CCGG	7 cut(s)	135, 147, 153, 174, 234, 450, 560
HgaI	GACGC	1 cut(s)	479
HhaI	GCGC	2 cut(s)	209, 221
Hin1II	CATG	5 cut(s)	56, 86, 164, 203, 281
Hin6I	GCGC	2 cut(s)	207, 219
HinP1I	GCGC	2 cut(s)	207, 219
HincII	GTYRAC	1 cut(s)	72
HindII	GTYRAC	1 cut(s)	72
HpaII	CCGG	7 cut(s)	135, 147, 153, 174, 234, 450, 560
HphI	GGTGA	3 cut(s)	263, 311, 353
Hpy166II	GTNNAC	1 cut(s)	72
Hpy188I	TCNGA	1 cut(s)	382
Hpy188III	TCNNGA	1 cut(s)	14
Hpy8I	GTNNAC	1 cut(s)	72
Hpy99I	CGWCG	2 cut(s)	329, 473
HpyAV	CCTTC	3 cut(s)	399, 409, 418
HpyCH4III	ACNGT	1 cut(s)	329
HpyCH4V	TGCA	3 cut(s)	37, 97, 160
HpyF10VI	GCNNNNNNNGC	3 cut(s)	227, 357, 369
HpyF3I	CTNAG	2 cut(s)	474, 555
Hsp92II	CATG	5 cut(s)	56, 86, 164, 203, 281
HspAI	GCGC	2 cut(s)	207, 219
Ksp22I	TGATCA	1 cut(s)	268
Kzo9I	GATC	3 cut(s)	170, 268, 585
LmnI	GCTCC	1 cut(s)	196
Lsp1109I	GCAGC	4 cut(s)	49, 372, 490, 585
MaeI	CTAG	3 cut(s)	32, 117, 375
MaeIII	GTNAC	2 cut(s)	14, 334
MalI	GATC	3 cut(s)	172, 270, 587
MboI	GATC	3 cut(s)	170, 268, 585
MboII	GAAGA	4 cut(s)	421, 424, 577, 595
MflI	RGATCY	1 cut(s)	170
MhlI	GDGCHC	1 cut(s)	306
MluCI	AATT	2 cut(s)	9, 443
MnlI	CCTC	5 cut(s)	110, 187, 285, 376, 561
MslI	CAYNNNNRTG	2 cut(s)	282, 327
MspI	CCGG	7 cut(s)	135, 147, 153, 174, 234, 450, 560
MspR9I	CCNGG	4 cut(s)	168, 175, 235, 603
MvaI	CCWGG	2 cut(s)	168, 603
MvnI	CGCG	1 cut(s)	209
MwoI	GCNNNNNNNGC	3 cut(s)	227, 357, 369
NciI	CCSGG	2 cut(s)	175, 235
NdeI	CATATG	1 cut(s)	487
NdeII	GATC	3 cut(s)	170, 268, 585
NlaIII	CATG	5 cut(s)	56, 86, 164, 203, 281
NlaIV	GGNNCC	3 cut(s)	151, 172, 178
NmuCI	GTSAC	1 cut(s)	14
NspI	RCATGY	1 cut(s)	164
OliI	CACNNNNGTG	1 cut(s)	327
PfoI	TCCNGGA	2 cut(s)	166, 173
PinAI	ACCGGT	2 cut(s)	146, 449
PkrI	GCNGC	4 cut(s)	39, 362, 480, 600
Psp6I	CCWGG	2 cut(s)	166, 601
PspGI	CCWGG	2 cut(s)	166, 601
PspN4I	GGNNCC	3 cut(s)	151, 172, 178
PspPI	GGNCC	1 cut(s)	177
PsuI	RGATCY	1 cut(s)	170
RsaI	GTAC	1 cut(s)	191
RsaNI	GTAC	1 cut(s)	190
RseI	CAYNNNNRTG	2 cut(s)	282, 327
SatI	GCNGC	4 cut(s)	38, 361, 479, 599
Sau3AI	GATC	3 cut(s)	170, 268, 585
Sau96I	GGNCC	1 cut(s)	177
ScrFI	CCNGG	4 cut(s)	168, 175, 235, 603
SduI	GDGCHC	1 cut(s)	306
SetI	ASST	9 cut(s)	33, 42, 102, 115, 277, 365, 374, 400, 600
SinI	GGWCC	1 cut(s)	177
SmiMI	CAYNNNNRTG	2 cut(s)	282, 327
Sse9I	AATT	2 cut(s)	9, 443
SsiI	CCGC	1 cut(s)	349
SspMI	CTAG	3 cut(s)	32, 117, 375
StyD4I	CCNGG	4 cut(s)	166, 173, 233, 601
TaaI	ACNGT	1 cut(s)	329
TasI	AATT	2 cut(s)	9, 443
TscAI	CASTG	1 cut(s)	535
TseFI	GTSAC	1 cut(s)	14
TseI	GCWGC	4 cut(s)	37, 360, 478, 598
Tsp45I	GTSAC	1 cut(s)	14
TspGWI	ACGGA	1 cut(s)	137
TspRI	CASTG	1 cut(s)	535
VpaK11BI	GGWCC	1 cut(s)	177
XapI	RAATTY	1 cut(s)	9
XceI	RCATGY	1 cut(s)	164
XspI	CTAG	3 cut(s)	32, 117, 375

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.