Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003341

Physical Location & Seq

Genomic Coordinates Forward (+)

14319476 .. 14326090

Gene Structure 6615 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G116100.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGAGACTCCATTTCCCTTCTCTCTCTCCCTCGCCGAAGCATCTCAACTCCAATCATCGCCCAGATATTGGCAAAGTTCAGAGCCCAGAAAAAATGGTTTCGAACTCGGACATCCTGACCCGGCTCACAGAAATCCTCAGCACTTCAGACCTCGACACGGCCACCGCCGGCAGCGTTCGCCGTCAACTGGAAAACGATTTCGGAGTTGATTTATCGGACCGGAAAAAGTTTATCCGGGACCAAATCGACATTTTCCTCGAGACCCACAGGGCAGAACCCCAAGACGAAGAAGAAGCAGAGGGGGAGGAGGTCGGTGAAGGGTCGGAGAATGCAGAAGAAGAAGAAGATGGAGATGAAGAAGGAGAGGAAGAGAATAAAGGCAAAAATAAAAGGAGAAAAACGGTGGATAAAGGAGTTGTCAAAAGAGGTGGCTTCAACAAAATATGTAGCTTGTCTCCACAGCTTCAAGAATTTGTTGGAGAGCCTGAAATGGCCAGGACAGAGGTAGTGAAGAGAATTTGGGCCTATATCCGTGAAAAGGATTTGCAGGACCCAAAAAATAGGCGGAATATAAGATGTGATGAATCACTACATTCCCTTTTCCGTGTTAACTCTATTAATATGTTTCAAATGAATAAAGTTCTCTCCAAGCATATATGGCCGCTTAGCAGAGAAGATGAACCTGTAAAGCAAAAGAAGAAAGGGGAAGAAAGTGATCATTCTGTCTCTGAAGGAGATGTAAATAATGTAGCACAAGAGGAAGAAGAGGTGGAAGAAGAAGAAGAGGAGGAGGAAGAAAAAGTTAGTAAACAAAAAGAAAGCAAGAAACGAAGGGCTGCAAAAGTGGATAAAGAAGTCAAGAAAAGGGGAGGAGGTGGCTTTACCAAATTATGCAGCCTTTCTCCAGAACTTCAAAAGTTCATGGGAGTGCCAGAATTGGCCAGAACAGAGGTTGTGAAGAAACTTTGGAGTTATATCCGGGAGAACAATTTGCAAGATCCAAATAATAAACGAGAGATAATATGTGATGAGTCATTGCGTGCCCTTTTTGATGTTGATTCTATCAATATGTTTCAAATGAATAAAGCTCTGTCCAAGCACATATTGCCCTTAAATGGAGAAGCTCCAGATAACGCTTCACGAAAGGATAAGCAGTCTGAACAGGAGCATGAAGAAGGTGAGATATATCTGTATATATATATATATATATATATATATAATATTCAGGTCTTCAGCTATCAAACTTTGTTGGTTGCAAAGTTATTGTATCTTTATACCACATCCTGGTACTGGCATAATGTTTCCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000120 GO:0000500 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0005730 GO:0006355 GO:0006356 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045943 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEK_C SWIB

Protein Analysis

437

Amino Acids

50.56

Weight (kDa)

5.26

Isoelectric Point (pI)

71.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003341)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49520 AT3G19080 AT3G19080 AT3G19080 AT3G19080
fragaria_vesca	FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890
malus_domestica	MD10G1089200.v1.1
prunus_persica	Prupe.8G116100_v2.0.a1 Prupe.8G116100_v2.0.a1 Prupe.8G116100_v2.0.a1 Prupe.8G116100_v2.0.a1
pyrus_communis	pycom05g06780 pycom10g07210
rosa_chinensis	RchiOBHm_Chr6g0259201
rosa_laevigata	RLG00000014549
rosa_multiflora	Rmu_ssc0000050.1_g000095
rosa_roxburghii	Rroxscaffold_7G00206510
rosa_rugosa	Rorug05G0585700 Rorug05G0585800 Rorug05G0585900
rosa_samantha	Rh6AG102700 Rh6BG095000 Rh6BG095100 Rh6CG092000 Rh6DG086000
rosa_wichuraiana	Rw6G008870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	68, 1284
AciI	CCGC	3 cut(s)	165, 565, 662
AclWI	GGATC	1 cut(s)	992
AcoI	YGGCCR	4 cut(s)	159, 492, 659, 939
AcsI	RAATTY	2 cut(s)	470, 516
AcuI	CTGAAG	3 cut(s)	129, 750, 1216
AfaI	GTAC	1 cut(s)	1289
AfiI	CCNNNNNNNGG	7 cut(s)	68, 157, 187, 538, 1115, 1284, 1290
AgsI	TTSAA	5 cut(s)	436, 467, 629, 914, 1076
AjnI	CCWGG	2 cut(s)	494, 1283
AluBI	AGCT	5 cut(s)	450, 463, 1088, 1124, 1236
AluI	AGCT	5 cut(s)	450, 463, 1088, 1124, 1236
Alw26I	GTCTC	3 cut(s)	254, 459, 730
AlwI	GGATC	1 cut(s)	992
Ama87I	CYCGRG	1 cut(s)	257
AoxI	GGCC	5 cut(s)	159, 492, 522, 659, 939
ApeKI	GCWGC	3 cut(s)	171, 836, 894
ApoI	RAATTY	2 cut(s)	470, 516
AseI	ATTAAT	1 cut(s)	618
AspS9I	GGNCC	4 cut(s)	217, 238, 522, 550
AsuC2I	CCSGG	3 cut(s)	121, 236, 980
AsuHPI	GGTGA	2 cut(s)	326, 1190
AsuII	TTCGAA	1 cut(s)	101
AvaI	CYCGRG	1 cut(s)	257
AvaII	GGWCC	3 cut(s)	217, 238, 550
BaeGI	GKGCMC	1 cut(s)	1045
BalI	TGGCCA	2 cut(s)	494, 941
BanII	GRGCYC	1 cut(s)	86
BbsI	GAAGAC	1 cut(s)	1222
BbvCI	CCTCAGC	1 cut(s)	137
BbvI	GCAGC	3 cut(s)	183, 823, 906
BccI	CCATC	1 cut(s)	341
BceAI	ACGGC	2 cut(s)	165, 174
BciT130I	CCWGG	2 cut(s)	496, 1285
BclI	TGATCA	1 cut(s)	715
BcnI	CCSGG	3 cut(s)	121, 236, 980
BcoDI	GTCTC	3 cut(s)	254, 459, 730
BisI	GCNGC	4 cut(s)	172, 662, 837, 895
BlpI	GCTNAGC	1 cut(s)	665
BlsI	GCNGC	4 cut(s)	173, 663, 838, 896
Bme1390I	CCNGG	5 cut(s)	121, 236, 496, 980, 1285
Bme18I	GGWCC	3 cut(s)	217, 238, 550
BmeT110I	CYCGRG	1 cut(s)	257
BmgT120I	GGNCC	4 cut(s)	217, 238, 522, 550
BmiI	GGNNCC	2 cut(s)	239, 552
BmrFI	CCNGG	5 cut(s)	121, 236, 496, 980, 1285
BmsI	GCATC	1 cut(s)	49
BpiI	GAAGAC	1 cut(s)	1222
BpmI	CTGGAG	2 cut(s)	888, 1110
Bpu10I	CCTNAGC	1 cut(s)	137
Bpu1102I	GCTNAGC	1 cut(s)	665
Bpu14I	TTCGAA	1 cut(s)	101
BpuMI	CCSGG	3 cut(s)	121, 236, 980
BsaI	GGTCTC	1 cut(s)	254
BsaWI	WCCGGW	1 cut(s)	219
Bsc4I	CCNNNNNNNGG	7 cut(s)	68, 157, 187, 538, 1115, 1284, 1290
Bse118I	RCCGGY	1 cut(s)	167
Bse1I	ACTGG	2 cut(s)	192, 1295
Bse3DI	GCAATG	1 cut(s)	1034
BseBI	CCWGG	2 cut(s)	496, 1285
BseGI	GGATG	2 cut(s)	111, 1280
BseLI	CCNNNNNNNGG	7 cut(s)	68, 157, 187, 538, 1115, 1284, 1290
BseMI	GCAATG	1 cut(s)	1034
BseMII	CTCAG	1 cut(s)	151
BseNI	ACTGG	2 cut(s)	192, 1295
BseRI	GAGGAG	4 cut(s)	320, 800, 803, 885
BseSI	GKGCMC	1 cut(s)	1045
BseXI	GCAGC	3 cut(s)	183, 823, 906
BshFI	GGCC	5 cut(s)	161, 494, 524, 661, 941
BsiHKCI	CYCGRG	1 cut(s)	257
BsiSI	CCGG	5 cut(s)	121, 168, 220, 235, 979
BslFI	GGGAC	1 cut(s)	251
BslI	CCNNNNNNNGG	7 cut(s)	68, 157, 187, 538, 1115, 1284, 1290
BsmAI	GTCTC	3 cut(s)	254, 459, 730
BsmFI	GGGAC	1 cut(s)	251
BsmI	GAATGC	1 cut(s)	334
BsnI	GGCC	5 cut(s)	161, 494, 524, 661, 941
Bso31I	GGTCTC	1 cut(s)	254
BsoBI	CYCGRG	1 cut(s)	257
Bsp119I	TTCGAA	1 cut(s)	101
Bsp1286I	GDGCHC	2 cut(s)	86, 1045
Bsp143I	GATC	2 cut(s)	715, 997
Bsp1720I	GCTNAGC	1 cut(s)	665
BspACI	CCGC	3 cut(s)	165, 565, 662
BspANI	GGCC	5 cut(s)	161, 494, 524, 661, 941
BspCNI	CTCAG	1 cut(s)	150
BspLI	GGNNCC	2 cut(s)	239, 552
BspPI	GGATC	1 cut(s)	992
BspT104I	TTCGAA	1 cut(s)	101
BspTNI	GGTCTC	1 cut(s)	254
BsrDI	GCAATG	1 cut(s)	1034
BsrFI	RCCGGY	1 cut(s)	167
BsrI	ACTGG	2 cut(s)	192, 1295
BssAI	RCCGGY	1 cut(s)	167
BssMI	GATC	2 cut(s)	715, 997
Bst2UI	CCWGG	2 cut(s)	496, 1285
Bst4CI	ACNGT	1 cut(s)	403
Bst6I	CTCTTC	4 cut(s)	363, 506, 759, 777
BstAPI	GCANNNNNTGC	1 cut(s)	1105
BstBI	TTCGAA	1 cut(s)	101
BstC8I	GCNNGC	2 cut(s)	169, 1041
BstDEI	CTNAG	2 cut(s)	137, 665
BstF5I	GGATG	2 cut(s)	111, 1280
BstKTI	GATC	2 cut(s)	718, 1000
BstMAI	GTCTC	3 cut(s)	254, 459, 730
BstMBI	GATC	2 cut(s)	715, 997
BstMWI	GCNNNNNNNGC	3 cut(s)	177, 658, 1105
BstNI	CCWGG	2 cut(s)	496, 1285
BstSCI	CCNGG	5 cut(s)	119, 234, 494, 978, 1283
BstSLI	GKGCMC	1 cut(s)	1045
BstV1I	GCAGC	3 cut(s)	183, 823, 906
BstV2I	GAAGAC	1 cut(s)	1222
BstX2I	RGATCY	1 cut(s)	997
BstYI	RGATCY	1 cut(s)	997
BsuRI	GGCC	5 cut(s)	161, 494, 524, 661, 941
BtgZI	GCGATG	1 cut(s)	41
BtsCI	GGATG	2 cut(s)	111, 1280
Cac8I	GCNNGC	2 cut(s)	169, 1041
Cfr10I	RCCGGY	1 cut(s)	167
Cfr13I	GGNCC	4 cut(s)	217, 238, 522, 550
CpoI	CGGWCCG	1 cut(s)	217
Csp6I	GTAC	1 cut(s)	1288
CspCI	CAANNNNNGTGG	2 cut(s)	409, 444
CspI	CGGWCCG	1 cut(s)	217
CviAII	CATG	2 cut(s)	922, 1169
CviQI	GTAC	1 cut(s)	1288
DdeI	CTNAG	2 cut(s)	137, 665
DpnI	GATC	2 cut(s)	717, 999
DpnII	GATC	2 cut(s)	715, 997
EaeI	YGGCCR	4 cut(s)	159, 492, 659, 939
Eam1104I	CTCTTC	4 cut(s)	363, 506, 759, 777
EarI	CTCTTC	4 cut(s)	363, 506, 759, 777
EciI	GGCGGA	1 cut(s)	580
Eco24I	GRGCYC	1 cut(s)	86
Eco31I	GGTCTC	1 cut(s)	254
Eco47I	GGWCC	3 cut(s)	217, 238, 550
Eco57I	CTGAAG	3 cut(s)	129, 750, 1216
Eco88I	CYCGRG	1 cut(s)	257
EcoO109I	RGGNCCY	1 cut(s)	550
EcoRII	CCWGG	2 cut(s)	494, 1283
EcoT38I	GRGCYC	1 cut(s)	86
FaeI	CATG	2 cut(s)	925, 1172
FaqI	GGGAC	1 cut(s)	251
FatI	CATG	2 cut(s)	921, 1168
FbaI	TGATCA	1 cut(s)	715
Fnu4HI	GCNGC	4 cut(s)	172, 662, 837, 895
FokI	GGATG	2 cut(s)	98, 1267
FriOI	GRGCYC	1 cut(s)	86
Fsp4HI	GCNGC	4 cut(s)	172, 662, 837, 895
GluI	GCNGC	4 cut(s)	172, 662, 837, 895
GsuI	CTGGAG	2 cut(s)	888, 1110
HaeIII	GGCC	5 cut(s)	161, 494, 524, 661, 941
HapII	CCGG	5 cut(s)	121, 168, 220, 235, 979
Hin1II	CATG	2 cut(s)	925, 1172
HincII	GTYRAC	2 cut(s)	185, 610
HindII	GTYRAC	2 cut(s)	185, 610
HinfI	GANTC	4 cut(s)	6, 584, 1031, 1058
HpaI	GTTAAC	1 cut(s)	610
HpaII	CCGG	5 cut(s)	121, 168, 220, 235, 979
HphI	GGTGA	2 cut(s)	326, 1190
Hpy166II	GTNNAC	3 cut(s)	185, 610, 809
Hpy188I	TCNGA	8 cut(s)	81, 109, 148, 203, 217, 325, 730, 1159
Hpy188III	TCNNGA	7 cut(s)	115, 259, 467, 859, 905, 1127, 1140
Hpy8I	GTNNAC	3 cut(s)	185, 610, 809
HpyAV	CCTTC	6 cut(s)	27, 311, 353, 725, 825, 1169
HpyCH4III	ACNGT	1 cut(s)	403
HpyCH4V	TGCA	6 cut(s)	332, 547, 839, 894, 994, 1256
HpyF10VI	GCNNNNNNNGC	3 cut(s)	177, 658, 1105
HpyF3I	CTNAG	2 cut(s)	137, 665
Hsp92II	CATG	2 cut(s)	925, 1172
KroI	GCCGGC	1 cut(s)	167
KroNI	GCCGGC	1 cut(s)	169
Ksp22I	TGATCA	1 cut(s)	715
KspAI	GTTAAC	1 cut(s)	610
Kzo9I	GATC	2 cut(s)	715, 997
LmnI	GCTCC	2 cut(s)	1129, 1165
Lsp1109I	GCAGC	3 cut(s)	183, 823, 906
LweI	GCATC	1 cut(s)	49
MalI	GATC	2 cut(s)	717, 999
MboI	GATC	2 cut(s)	715, 997
MflI	RGATCY	1 cut(s)	997
MhlI	GDGCHC	2 cut(s)	86, 1045
MlsI	TGGCCA	2 cut(s)	494, 941
MluCI	AATT	5 cut(s)	470, 516, 887, 935, 988
MluNI	TGGCCA	2 cut(s)	494, 941
MlyI	GAGTC	1 cut(s)	1040
MmeI	TCCRAC	2 cut(s)	303, 457
Mox20I	TGGCCA	2 cut(s)	494, 941
MroNI	GCCGGC	1 cut(s)	167
MscI	TGGCCA	2 cut(s)	494, 941
MseI	TTAA	3 cut(s)	609, 618, 1112
MslI	CAYNNNNRTG	1 cut(s)	926
Msp20I	TGGCCA	2 cut(s)	494, 941
MspI	CCGG	5 cut(s)	121, 168, 220, 235, 979
MspR9I	CCNGG	5 cut(s)	121, 236, 496, 980, 1285
Mva1269I	GAATGC	1 cut(s)	334
MvaI	CCWGG	2 cut(s)	496, 1285
MwoI	GCNNNNNNNGC	3 cut(s)	177, 658, 1105
NaeI	GCCGGC	1 cut(s)	169
NciI	CCSGG	3 cut(s)	121, 236, 980
NdeII	GATC	2 cut(s)	715, 997
NgoMIV	GCCGGC	1 cut(s)	167
NlaIII	CATG	2 cut(s)	925, 1172
NlaIV	GGNNCC	2 cut(s)	239, 552
NspV	TTCGAA	1 cut(s)	101
PaeR7I	CTCGAG	1 cut(s)	257
PctI	GAATGC	1 cut(s)	334
PdiI	GCCGGC	1 cut(s)	169
PfeI	GAWTC	2 cut(s)	584, 1058
PflMI	CCANNNNNTGG	2 cut(s)	68, 1284
PfoI	TCCNGGA	2 cut(s)	234, 978
PkrI	GCNGC	4 cut(s)	173, 663, 838, 896
PleI	GAGTC	1 cut(s)	1039
PpsI	GAGTC	1 cut(s)	1039
PpuMI	RGGWCCY	1 cut(s)	550
PshBI	ATTAAT	1 cut(s)	618
Psp5II	RGGWCCY	1 cut(s)	550
Psp6I	CCWGG	2 cut(s)	494, 1283
PspGI	CCWGG	2 cut(s)	494, 1283
PspN4I	GGNNCC	2 cut(s)	239, 552
PspPI	GGNCC	4 cut(s)	217, 238, 522, 550
PspPPI	RGGWCCY	1 cut(s)	550
PsuI	RGATCY	1 cut(s)	997
RsaI	GTAC	1 cut(s)	1289
RsaNI	GTAC	1 cut(s)	1288
RseI	CAYNNNNRTG	1 cut(s)	926
Rsr2I	CGGWCCG	1 cut(s)	217
RsrII	CGGWCCG	1 cut(s)	217
SaqAI	TTAA	3 cut(s)	609, 618, 1112
SatI	GCNGC	4 cut(s)	172, 662, 837, 895
Sau3AI	GATC	2 cut(s)	715, 997
Sau96I	GGNCC	4 cut(s)	217, 238, 522, 550
SchI	GAGTC	1 cut(s)	1040
ScrFI	CCNGG	5 cut(s)	121, 236, 496, 980, 1285
SduI	GDGCHC	2 cut(s)	86, 1045
SfaNI	GCATC	1 cut(s)	49
Sfr274I	CTCGAG	1 cut(s)	257
SfuI	TTCGAA	1 cut(s)	101
SinI	GGWCC	3 cut(s)	217, 238, 550
SlaI	CTCGAG	1 cut(s)	257
SmiMI	CAYNNNNRTG	1 cut(s)	926
SmlI	CTYRAG	1 cut(s)	257
SmoI	CTYRAG	1 cut(s)	257
Sse9I	AATT	5 cut(s)	470, 516, 887, 935, 988
SsiI	CCGC	3 cut(s)	165, 565, 662
SspI	AATATT	1 cut(s)	1222
StyD4I	CCNGG	5 cut(s)	119, 234, 494, 978, 1283
TaaI	ACNGT	1 cut(s)	403
TaqI	TCGA	4 cut(s)	101, 153, 246, 258
TasI	AATT	5 cut(s)	470, 516, 887, 935, 988
TauI	GCSGC	1 cut(s)	664
TfiI	GAWTC	2 cut(s)	584, 1058
Tru1I	TTAA	3 cut(s)	609, 618, 1112
Tru9I	TTAA	3 cut(s)	609, 618, 1112
TseI	GCWGC	3 cut(s)	171, 836, 894
TspDTI	ATGAA	7 cut(s)	369, 597, 647, 693, 910, 1094, 1185
TspGWI	ACGGA	2 cut(s)	521, 593
Van91I	CCANNNNNTGG	2 cut(s)	68, 1284
VpaK11BI	GGWCC	3 cut(s)	217, 238, 550
VspI	ATTAAT	1 cut(s)	618
XapI	RAATTY	2 cut(s)	470, 516
XhoI	CTCGAG	1 cut(s)	257

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.