Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003341

Physical Location & Seq

Genomic Coordinates Reverse (-)

78304337 .. 78306388

Gene Structure 2052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0585900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGGATTGTTGCCAATGGGAAGGCATTACTTGTGATGTGGCTGGTCGAGTAACCCATTTGCACTTATCCTCCAAAGGCCTCAAACTCAAAGGAGGTATTTTTTCCTCATCATCACTCCAAAATCTCACACATCTCACCCACCTCAATCTCTCTCGCAATTCACTTTATGGTTCTTTAGATCAAGCCGGATTCTTCTTGTCCTTGGGTCATCTTGAGGTACTTGATTTGAGTTTTAACCTTCTTTCTGGAGAGCTCCCAGGTTCTCTATCATCATCCAATAATATTCGAATGGTGGATTTGTCTAGCAATCGCTTCCATGGTGCAATTCCATCCTCCTTCTTCCAACAAGCAAAGAATTTGACTTGTTTCAATGTCATGAACAACACCTTCTCAGGTTATATCCCGTCCCCTATTTGTGTCCAGTCTTCTTCATTGATTAGGCTATTGGATTTTTCCTACAATAAATTTGGAGGCAATCTCTCTCGAGGAATAGGAAACTGTTCCAAACTGGAAGTTTTCCGTGCTGGTTACAATAACCTCTCAGGATCACTTCCAGAAGATATCTATGATGCTACCGCACTGGAAGAAATTGCAATCCCTGCTAATTCGTTTTATGGAGGCATTAGTAACAGAATTGTTAACCTCACTAACCTCACAACCCTTGACTTCTACTTTAATCATTTCAGTGGCATGCTTCCAATAGATATTGGGAAGCTCTCCAAATTGAAAGTCTTGCTCCTTCATTCCAATAATCTAGAAGGTTCCTTGCCACCATCTTTCCTGAATTGCACAAACCTTATGGAACTGAATCTAGGATTCAACCTTTTGAAAGGAGATATCTCGGCTTTTAATTTCTCCAGACTAGGTCAACTTCGTAAACTTGACTTTATGAGTAATCATTTTACTGGTACCTTGCCAATAAGCCTTTACTCATGCAAGTCCCTTAGAGCAATTCGACTGAGCTTAAACAACCTAGAGGGACAAATACAACCCGAGATTGTCTCGTTAAAACACTTATCCTTCCTCTCACTTTCTGGGAACAGACTGACCAATGTCACAGGCGCTATGAATATATTGAAGGGCTGTAGAAATCTCACAGTACTCATCCTTTCAACTACTTTTATAGGTGAAGAAATGCCAGATGGTGATCACATGGCTCACTTTGATGGATTCCAAAATCTTAGGATTTTGGCTTTGCGTGGTTGTGAGCTCACCGGTCAAATACCCATATGGGTTTCTAAGCTCAAGAAGCTAGAGATCTTGGATATGTCTCTTAATAGAATCACAGGCTCAATTCCTACTTGGTTGGGGACTTTTCCAATGCTCTTTTCTATAAACTTGGGGTCCAACCTAATCTCAGGTGAAATTCCAAAAGAACTTTGCACACTACCAATGTTGGTATCTGAACAAACTGCAGCTCAAGTAGATCATGGTTATCTTGAATTGCCTTTCTTCGCTTCCCAAGCCGTGCCTGATGCAAGCATTTTACAGTTCAATTCTTTGTCTTACTTTCCACCATCTATATTCTTAGGCGATAATAGCATTACTGGCAATATACCAACTGAGATCGGAAAGTTGCAACTTCTCCATACATTGGATCTCAGCGCCAACCAGCTGTCTGGCAACATTCCGGACCAAATATCTGATCTCAAAAACTTGGAGACGTTGGATCTTTCGGTGAATCATTTGTCTGGAGAAATCCCACCTTCAATGACGAGTCTTAGTTTCTTGTCATCTTTTAATGTCTCATATAATAACTTGGAAGGAGAAATACCAAAAAGCACTCAGCTCCAAGGCTTGAATGTCTCAGCATTTGAGGGGAATCCGGAGCTTTGTGGTTCCCCGCTACTAAATCCGTGTCAATCATTCAATGGTACTGATTTAGATGATGATAAGAATGACGGGAATCAAATTCTAGGGTTGCATATTTCCGTTGTGCTTGGCTTCACTATAGGGTTGGTGGGAGTTTGTGGTTCATTATTGCTTATCAAGACCTGGAGAGATGCATATTTCAAATTCCTGAATAATGTACAAGATAGGCTCAAATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000120 GO:0000500 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0005730 GO:0006355 GO:0006356 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045943 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEK_C SWIB

Protein Analysis

683

Amino Acids

74.71

Weight (kDa)

5.74

Isoelectric Point (pI)

29.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	44 - 105	2.5e-06	Leucine rich repeat
LRR_14	PF23598	214 - 453	1.3e-07	Leucine-rich repeat region
LRR_8	PF13855	393 - 452	6.7e-07	Leucine rich repeat
LRR_14	PF23598	517 - 606	2.4e-09	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003341)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49520 AT3G19080 AT3G19080 AT3G19080 AT3G19080
fragaria_vesca	FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890 FvH4_2g06890
malus_domestica	MD10G1089200.v1.1
prunus_persica	Prupe.8G116100_v2.0.a1 Prupe.8G116100_v2.0.a1 Prupe.8G116100_v2.0.a1 Prupe.8G116100_v2.0.a1
pyrus_communis	pycom05g06780 pycom10g07210
rosa_chinensis	RchiOBHm_Chr6g0259201
rosa_laevigata	RLG00000014549
rosa_multiflora	Rmu_ssc0000050.1_g000095
rosa_roxburghii	Rroxscaffold_7G00206510
rosa_rugosa	Rorug05G0585700 Rorug05G0585800 Rorug05G0585900
rosa_samantha	Rh6AG102700 Rh6BG095000 Rh6BG095100 Rh6CG092000 Rh6DG086000
rosa_wichuraiana	Rw6G008870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	908
AccB1I	GGYRCC	1 cut(s)	908
AccB7I	CCANNNNNTGG	1 cut(s)	1594
AccIII	TCCGGA	2 cut(s)	1630, 1825
AciI	CCGC	2 cut(s)	576, 1844
AclWI	GGATC	3 cut(s)	553, 1605, 1677
AcsI	RAATTY	5 cut(s)	355, 464, 1365, 1911, 2015
AfaI	GTAC	5 cut(s)	219, 910, 1101, 1876, 2031
AfiI	CCNNNNNNNGG	1 cut(s)	1594
AgeI	ACCGGT	1 cut(s)	1214
AjnI	CCWGG	2 cut(s)	256, 1994
AjuI	GAANNNNNNNTTGG	2 cut(s)	1312, 1344
Alw21I	GWGCWC	2 cut(s)	255, 1212
Alw26I	GTCTC	5 cut(s)	1006, 1275, 1655, 1750, 1810
AlwI	GGATC	3 cut(s)	553, 1605, 1677
Ama87I	CYCGRG	2 cut(s)	483, 992
Aor13HI	TCCGGA	2 cut(s)	1630, 1825
AoxI	GGCC	1 cut(s)	76
ApeKI	GCWGC	1 cut(s)	1415
ApoI	RAATTY	5 cut(s)	355, 464, 1365, 1911, 2015
ArsI	GACNNNNNNTTYG	2 cut(s)	714, 746
AsiGI	ACCGGT	1 cut(s)	1214
Asp700I	GAANNNNTTC	1 cut(s)	499
Asp718I	GGTACC	1 cut(s)	908
AspLEI	GCGC	2 cut(s)	1064, 1607
AspS9I	GGNCC	2 cut(s)	1344, 1633
AsuHPI	GGTGA	6 cut(s)	127, 1139, 1157, 1204, 1373, 1690
AsuII	TTCGAA	1 cut(s)	286
AvaI	CYCGRG	2 cut(s)	483, 992
AvaII	GGWCC	2 cut(s)	1344, 1633
BanI	GGYRCC	1 cut(s)	908
BanII	GRGCYC	2 cut(s)	255, 1212
BarI	GAAGNNNNNNTAC	2 cut(s)	1755, 1787
BbsI	GAAGAC	1 cut(s)	417
Bbv12I	GWGCWC	2 cut(s)	255, 1212
BbvI	GCAGC	1 cut(s)	1427
BccI	CCATC	5 cut(s)	337, 781, 1136, 1160, 1525
BceAI	ACGGC	1 cut(s)	1451
BciT130I	CCWGG	2 cut(s)	258, 1996
BclI	TGATCA	1 cut(s)	1147
BcoDI	GTCTC	5 cut(s)	1006, 1275, 1655, 1750, 1810
BfaI	CTAG	7 cut(s)	303, 755, 812, 863, 974, 1253, 1916
BfmI	CTRYAG	3 cut(s)	1084, 1413, 1950
BfoI	RGCGCY	2 cut(s)	1065, 1608
BglII	AGATCT	1 cut(s)	1257
BisI	GCNGC	1 cut(s)	1416
BlsI	GCNGC	1 cut(s)	1417
BmcAI	AGTACT	1 cut(s)	1101
Bme1390I	CCNGG	2 cut(s)	258, 1996
Bme18I	GGWCC	2 cut(s)	1344, 1633
BmeT110I	CYCGRG	2 cut(s)	483, 992
BmgT120I	GGNCC	2 cut(s)	1344, 1633
BmiI	GGNNCC	4 cut(s)	763, 910, 1345, 1840
BmrFI	CCNGG	2 cut(s)	258, 1996
BmsI	GCATC	3 cut(s)	559, 1465, 1993
BoxI	GACNNNNGTC	1 cut(s)	1052
BpiI	GAAGAC	1 cut(s)	417
BplI	GAGNNNNNCTC	4 cut(s)	462, 494, 986, 1018
BpmI	CTGGAG	4 cut(s)	267, 841, 1713, 2017
Bpu14I	TTCGAA	1 cut(s)	286
BpuEI	CTTGAG	3 cut(s)	233, 1229, 1404
BsaBI	GATNNNNATC	1 cut(s)	1146
BsaJI	CCNNGG	4 cut(s)	201, 256, 316, 1792
BsaWI	WCCGGW	3 cut(s)	1214, 1630, 1825
BsaXI	ACNNNNNCTCC	2 cut(s)	53, 83
Bsc4I	CCNNNNNNNGG	1 cut(s)	1594
Bse118I	RCCGGY	1 cut(s)	1214
Bse1I	ACTGG	5 cut(s)	421, 513, 585, 910, 1552
Bse8I	GATNNNNATC	1 cut(s)	1146
BseAI	TCCGGA	2 cut(s)	1630, 1825
BseBI	CCWGG	2 cut(s)	258, 1996
BseDI	CCNNGG	4 cut(s)	201, 256, 316, 1792
BseGI	GGATG	3 cut(s)	272, 329, 1104
BseJI	GATNNNNATC	1 cut(s)	1146
BseLI	CCNNNNNNNGG	1 cut(s)	1594
BseMII	CTCAG	8 cut(s)	405, 555, 950, 1371, 1554, 1615, 1799, 1821
BseNI	ACTGG	5 cut(s)	421, 513, 585, 910, 1552
BseXI	GCAGC	1 cut(s)	1427
BshFI	GGCC	1 cut(s)	78
BshNI	GGYRCC	1 cut(s)	908
BshTI	ACCGGT	1 cut(s)	1214
BsiHKAI	GWGCWC	2 cut(s)	255, 1212
BsiHKCI	CYCGRG	2 cut(s)	483, 992
BsiSI	CCGG	4 cut(s)	186, 1215, 1631, 1826
BslFI	GGGAC	4 cut(s)	391, 925, 993, 1324
BslI	CCNNNNNNNGG	1 cut(s)	1594
BsmAI	GTCTC	5 cut(s)	1006, 1275, 1655, 1750, 1810
BsmBI	CGTCTC	1 cut(s)	1655
BsmFI	GGGAC	4 cut(s)	391, 925, 993, 1324
BsnI	GGCC	1 cut(s)	78
BsoBI	CYCGRG	2 cut(s)	483, 992
Bsp119I	TTCGAA	1 cut(s)	286
Bsp1286I	GDGCHC	2 cut(s)	255, 1212
Bsp13I	TCCGGA	2 cut(s)	1630, 1825
Bsp1407I	TGTACA	1 cut(s)	2029
Bsp143I	GATC	9 cut(s)	178, 545, 1147, 1257, 1426, 1566, 1597, 1645, 1669
Bsp19I	CCATGG	1 cut(s)	316
BspACI	CCGC	2 cut(s)	576, 1844
BspANI	GGCC	1 cut(s)	78
BspCNI	CTCAG	8 cut(s)	404, 554, 951, 1370, 1555, 1614, 1798, 1820
BspEI	TCCGGA	2 cut(s)	1630, 1825
BspHI	TCATGA	1 cut(s)	375
BspLI	GGNNCC	4 cut(s)	763, 910, 1345, 1840
BspMAI	CTGCAG	1 cut(s)	1417
BspPI	GGATC	3 cut(s)	553, 1605, 1677
BspT104I	TTCGAA	1 cut(s)	286
BspT107I	GGYRCC	1 cut(s)	908
BsrFI	RCCGGY	1 cut(s)	1214
BsrGI	TGTACA	1 cut(s)	2029
BsrI	ACTGG	5 cut(s)	421, 513, 585, 910, 1552
BssAI	RCCGGY	1 cut(s)	1214
BssECI	CCNNGG	4 cut(s)	201, 256, 316, 1792
BssMI	GATC	9 cut(s)	178, 545, 1147, 1257, 1426, 1566, 1597, 1645, 1669
BssT1I	CCWWGG	3 cut(s)	201, 316, 1792
Bst2UI	CCWGG	2 cut(s)	258, 1996
Bst4CI	ACNGT	3 cut(s)	500, 1099, 1491
BstAPI	GCANNNNNTGC	1 cut(s)	599
BstAUI	TGTACA	1 cut(s)	2029
BstBI	TTCGAA	1 cut(s)	286
BstC8I	GCNNGC	2 cut(s)	692, 1480
BstDSI	CCRYGG	1 cut(s)	316
BstF5I	GGATG	3 cut(s)	272, 329, 1104
BstH2I	RGCGCY	2 cut(s)	1065, 1608
BstHHI	GCGC	2 cut(s)	1064, 1607
BstKTI	GATC	9 cut(s)	181, 548, 1150, 1260, 1429, 1569, 1600, 1648, 1672
BstMAI	GTCTC	5 cut(s)	1006, 1275, 1655, 1750, 1810
BstMBI	GATC	9 cut(s)	178, 545, 1147, 1257, 1426, 1566, 1597, 1645, 1669
BstMWI	GCNNNNNNNGC	5 cut(s)	599, 1249, 1463, 1539, 1548
BstNI	CCWGG	2 cut(s)	258, 1996
BstNSI	RCATGY	1 cut(s)	694
BstPAI	GACNNNNGTC	1 cut(s)	1052
BstSCI	CCNGG	2 cut(s)	256, 1994
BstSFI	CTRYAG	3 cut(s)	1084, 1413, 1950
BstV1I	GCAGC	1 cut(s)	1427
BstV2I	GAAGAC	1 cut(s)	417
BstX2I	RGATCY	3 cut(s)	1257, 1597, 1669
BstXI	CCANNNNNNTGG	1 cut(s)	1619
BstYI	RGATCY	3 cut(s)	1257, 1597, 1669
BsuRI	GGCC	1 cut(s)	78
BtgI	CCRYGG	1 cut(s)	316
BtsCI	GGATG	3 cut(s)	272, 329, 1104
BtsIMutI	CAGTG	2 cut(s)	578, 691
Cac8I	GCNNGC	2 cut(s)	692, 1480
CciI	TCATGA	1 cut(s)	375
CfoI	GCGC	2 cut(s)	1064, 1607
Cfr10I	RCCGGY	1 cut(s)	1214
Cfr13I	GGNCC	2 cut(s)	1344, 1633
Csp6I	GTAC	5 cut(s)	218, 909, 1100, 1875, 2030
CspAI	ACCGGT	1 cut(s)	1214
CviAII	CATG	6 cut(s)	317, 376, 691, 933, 1153, 1430
CviQI	GTAC	5 cut(s)	218, 909, 1100, 1875, 2030
DpnI	GATC	9 cut(s)	180, 547, 1149, 1259, 1428, 1568, 1599, 1647, 1671
DpnII	GATC	9 cut(s)	178, 545, 1147, 1257, 1426, 1566, 1597, 1645, 1669
Ecl136II	GAGCTC	2 cut(s)	253, 1210
Eco130I	CCWWGG	3 cut(s)	201, 316, 1792
Eco147I	AGGCCT	1 cut(s)	78
Eco24I	GRGCYC	2 cut(s)	255, 1212
Eco32I	GATATC	2 cut(s)	562, 838
Eco47I	GGWCC	2 cut(s)	1344, 1633
Eco53kI	GAGCTC	2 cut(s)	253, 1210
Eco88I	CYCGRG	2 cut(s)	483, 992
EcoICRI	GAGCTC	2 cut(s)	253, 1210
EcoRII	CCWGG	2 cut(s)	256, 1994
EcoRV	GATATC	2 cut(s)	562, 838
EcoT14I	CCWWGG	3 cut(s)	201, 316, 1792
EcoT22I	ATGCAT	1 cut(s)	2008
EcoT38I	GRGCYC	2 cut(s)	255, 1212
ErhI	CCWWGG	3 cut(s)	201, 316, 1792
Esp3I	CGTCTC	1 cut(s)	1655
FaeI	CATG	6 cut(s)	320, 379, 694, 936, 1156, 1433
FaqI	GGGAC	4 cut(s)	391, 925, 993, 1324
FatI	CATG	6 cut(s)	316, 375, 690, 932, 1152, 1429
FauI	CCCGC	1 cut(s)	1851
FauNDI	CATATG	1 cut(s)	1229
FbaI	TGATCA	1 cut(s)	1147
Fnu4HI	GCNGC	1 cut(s)	1416
FokI	GGATG	3 cut(s)	259, 316, 1091
FriOI	GRGCYC	2 cut(s)	255, 1212
Fsp4HI	GCNGC	1 cut(s)	1416
FspBI	CTAG	7 cut(s)	303, 755, 812, 863, 974, 1253, 1916
GlaI	GCGC	2 cut(s)	1063, 1606
GluI	GCNGC	1 cut(s)	1416
GsuI	CTGGAG	4 cut(s)	267, 841, 1713, 2017
HaeII	RGCGCY	2 cut(s)	1065, 1608
HaeIII	GGCC	1 cut(s)	78
HapII	CCGG	4 cut(s)	186, 1215, 1631, 1826
HhaI	GCGC	2 cut(s)	1064, 1607
Hin1II	CATG	6 cut(s)	320, 379, 694, 936, 1156, 1433
Hin6I	GCGC	2 cut(s)	1062, 1605
HinP1I	GCGC	2 cut(s)	1062, 1605
HincII	GTYRAC	2 cut(s)	640, 869
HindII	GTYRAC	2 cut(s)	640, 869
HinfI	GANTC	9 cut(s)	189, 808, 816, 1170, 1281, 1681, 1717, 1822, 1906
HpaI	GTTAAC	1 cut(s)	640
HpaII	CCGG	4 cut(s)	186, 1215, 1631, 1826
HphI	GGTGA	6 cut(s)	127, 1139, 1157, 1204, 1373, 1690
Hpy166II	GTNNAC	3 cut(s)	640, 869, 878
Hpy188I	TCNGA	3 cut(s)	1405, 1571, 1645
Hpy8I	GTNNAC	3 cut(s)	640, 869, 878
HpyCH4III	ACNGT	3 cut(s)	500, 1099, 1491
HpyCH4IV	ACGT	1 cut(s)	1664
HpyF10VI	GCNNNNNNNGC	5 cut(s)	599, 1249, 1463, 1539, 1548
HpySE526I	ACGT	1 cut(s)	1664
Hsp92II	CATG	6 cut(s)	320, 379, 694, 936, 1156, 1433
HspAI	GCGC	2 cut(s)	1062, 1605
Kpn2I	TCCGGA	2 cut(s)	1630, 1825
KpnI	GGTACC	1 cut(s)	912
Ksp22I	TGATCA	1 cut(s)	1147
KspAI	GTTAAC	1 cut(s)	640
Kzo9I	GATC	9 cut(s)	178, 545, 1147, 1257, 1426, 1566, 1597, 1645, 1669
LmnI	GCTCC	4 cut(s)	258, 741, 1794, 1828
Lsp1109I	GCAGC	1 cut(s)	1427
LweI	GCATC	3 cut(s)	559, 1465, 1993
MaeI	CTAG	7 cut(s)	303, 755, 812, 863, 974, 1253, 1916
MaeII	ACGT	1 cut(s)	1664
MaeIII	GTNAC	4 cut(s)	49, 527, 626, 1054
MalI	GATC	9 cut(s)	180, 547, 1149, 1259, 1428, 1568, 1599, 1647, 1671
MboI	GATC	9 cut(s)	178, 545, 1147, 1257, 1426, 1566, 1597, 1645, 1669
MboII	GAAGA	8 cut(s)	184, 331, 417, 420, 569, 596, 1142, 1444
MflI	RGATCY	3 cut(s)	1257, 1597, 1669
MhlI	GDGCHC	2 cut(s)	255, 1212
MlyI	GAGTC	1 cut(s)	1726
MmeI	TCCRAC	3 cut(s)	367, 1371, 1647
Mph1103I	ATGCAT	1 cut(s)	2008
MroI	TCCGGA	2 cut(s)	1630, 1825
MroXI	GAANNNNTTC	1 cut(s)	499
MseI	TTAA	8 cut(s)	234, 639, 675, 849, 965, 1007, 1275, 1740
MslI	CAYNNNNRTG	2 cut(s)	684, 1164
MspA1I	CMGCKG	1 cut(s)	1615
MspI	CCGG	4 cut(s)	186, 1215, 1631, 1826
MspR9I	CCNGG	2 cut(s)	258, 1996
MvaI	CCWGG	2 cut(s)	258, 1996
MwoI	GCNNNNNNNGC	5 cut(s)	599, 1249, 1463, 1539, 1548
NcoI	CCATGG	1 cut(s)	316
NdeI	CATATG	1 cut(s)	1229
NdeII	GATC	9 cut(s)	178, 545, 1147, 1257, 1426, 1566, 1597, 1645, 1669
NlaIII	CATG	6 cut(s)	320, 379, 694, 936, 1156, 1433
NlaIV	GGNNCC	4 cut(s)	763, 910, 1345, 1840
NmeAIII	GCCGAG	1 cut(s)	821
NmuCI	GTSAC	1 cut(s)	1054
NsiI	ATGCAT	1 cut(s)	2008
NspI	RCATGY	1 cut(s)	694
NspV	TTCGAA	1 cut(s)	286
PaeI	GCATGC	1 cut(s)	694
PaeR7I	CTCGAG	1 cut(s)	483
PagI	TCATGA	1 cut(s)	375
PceI	AGGCCT	1 cut(s)	78
PdmI	GAANNNNTTC	1 cut(s)	499
PfeI	GAWTC	8 cut(s)	189, 808, 816, 1170, 1281, 1681, 1822, 1906
PflFI	GACNNNGTC	1 cut(s)	864
PflMI	CCANNNNNTGG	1 cut(s)	1594
PinAI	ACCGGT	1 cut(s)	1214
PkrI	GCNGC	1 cut(s)	1417
PleI	GAGTC	1 cut(s)	1725
PpsI	GAGTC	1 cut(s)	1725
PshAI	GACNNNNGTC	1 cut(s)	1052
Psp124BI	GAGCTC	2 cut(s)	255, 1212
Psp6I	CCWGG	2 cut(s)	256, 1994
PspGI	CCWGG	2 cut(s)	256, 1994
PspN4I	GGNNCC	4 cut(s)	763, 910, 1345, 1840
PspPI	GGNCC	2 cut(s)	1344, 1633
PstI	CTGCAG	1 cut(s)	1417
PsuI	RGATCY	3 cut(s)	1257, 1597, 1669
PsyI	GACNNNGTC	1 cut(s)	864
PvuII	CAGCTG	1 cut(s)	1615
RsaI	GTAC	5 cut(s)	219, 910, 1101, 1876, 2031
RsaNI	GTAC	5 cut(s)	218, 909, 1100, 1875, 2030
RseI	CAYNNNNRTG	2 cut(s)	684, 1164
SacI	GAGCTC	2 cut(s)	255, 1212
SaqAI	TTAA	8 cut(s)	234, 639, 675, 849, 965, 1007, 1275, 1740
SatI	GCNGC	1 cut(s)	1416
Sau3AI	GATC	9 cut(s)	178, 545, 1147, 1257, 1426, 1566, 1597, 1645, 1669
Sau96I	GGNCC	2 cut(s)	1344, 1633
ScaI	AGTACT	1 cut(s)	1101
SchI	GAGTC	1 cut(s)	1726
ScrFI	CCNGG	2 cut(s)	258, 1996
SduI	GDGCHC	2 cut(s)	255, 1212
SfaNI	GCATC	3 cut(s)	559, 1465, 1993
SfcI	CTRYAG	3 cut(s)	1084, 1413, 1950
Sfr274I	CTCGAG	1 cut(s)	483
SfuI	TTCGAA	1 cut(s)	286
SinI	GGWCC	2 cut(s)	1344, 1633
SlaI	CTCGAG	1 cut(s)	483
SmiMI	CAYNNNNRTG	2 cut(s)	684, 1164
SmlI	CTYRAG	4 cut(s)	212, 483, 1244, 1419
SmoI	CTYRAG	4 cut(s)	212, 483, 1244, 1419
SphI	GCATGC	1 cut(s)	694
SseBI	AGGCCT	1 cut(s)	78
SsiI	CCGC	2 cut(s)	576, 1844
SspI	AATATT	1 cut(s)	283
SspMI	CTAG	7 cut(s)	303, 755, 812, 863, 974, 1253, 1916
SstI	GAGCTC	2 cut(s)	255, 1212
StuI	AGGCCT	1 cut(s)	78
StyD4I	CCNGG	2 cut(s)	256, 1994
StyI	CCWWGG	3 cut(s)	201, 316, 1792
TaaI	ACNGT	3 cut(s)	500, 1099, 1491
TaiI	ACGT	1 cut(s)	1667
TaqI	TCGA	4 cut(s)	46, 286, 484, 955
TatI	WGTACW	2 cut(s)	1099, 2029
TfiI	GAWTC	8 cut(s)	189, 808, 816, 1170, 1281, 1681, 1822, 1906
Tru1I	TTAA	8 cut(s)	234, 639, 675, 849, 965, 1007, 1275, 1740
Tru9I	TTAA	8 cut(s)	234, 639, 675, 849, 965, 1007, 1275, 1740
TscAI	CASTG	2 cut(s)	585, 691
TseFI	GTSAC	1 cut(s)	1054
TseI	GCWGC	1 cut(s)	1415
Tsp45I	GTSAC	1 cut(s)	1054
TspDTI	ATGAA	5 cut(s)	392, 420, 731, 1082, 1965
TspGWI	ACGGA	3 cut(s)	509, 1845, 1921
TspRI	CASTG	2 cut(s)	585, 691
Tth111I	GACNNNGTC	1 cut(s)	864
Van91I	CCANNNNNTGG	1 cut(s)	1594
VpaK11BI	GGWCC	2 cut(s)	1344, 1633
XapI	RAATTY	5 cut(s)	355, 464, 1365, 1911, 2015
XbaI	TCTAGA	1 cut(s)	754
XceI	RCATGY	1 cut(s)	694
XhoI	CTCGAG	1 cut(s)	483
XmnI	GAANNNNTTC	1 cut(s)	499
XspI	CTAG	7 cut(s)	303, 755, 812, 863, 974, 1253, 1916
ZrmI	AGTACT	1 cut(s)	1101
Zsp2I	ATGCAT	1 cut(s)	2008

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.