Prupe.8G122200_v2.0.a1

Presequence protease 1, chloroplastic mitochondrial-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
14791121 .. 14799264
8144 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G122200.1

Sequence Viewer

Length: 3243 bp
ATGGCGAGGGCTACTACTCTGTTTCGTTCTCCTCGCCGAATCTCTCGTTTTGCCTTACCATCATCTTCATCTTGTTCTTTCTCTTCAGCTTCTGCTCCTAGAAACCACCGCCACCGTCCGACTCCGGACGTCCCCACCGCACCCTCTCTGCTCCGAAGCCACATAAGATTACTCCCCTCCTCCTTCCACCCCCATCTCACAACCCACTTCAGGTGCCTCTCCTCACGCGCCGTCCCCGCTTCTTCTGACACTCCGCCATCTGAGTGCTCGGAGGTGAAAGATGAAGTTTTGGACAAGCTGGGATTCGAGAAGGTTACCGAAGAGTACATTGGGGAGTGCAAGTCGAAAGCTTTACTTTTCCGGCACAAAAAGACCGGTGCCCAAGTCATTTCTATGTCCAACGACGATGAAGAAAAGGTCTTTAGCATTATTTTCCGGAACCCACTGATGGATTCCACTGGAATTTCACAAATACTGCAACGGAGTGTATACTGTGGGTCAAGAAAGTACCCTGTGAAAAATCCATTTGAGGAGGTGATTGGAGGGACCTTGGGTAATTTTTCGGAAAAATTCATATATTCTGATAGGACTTGCTACGTAGTTACTTCCACACATACAAAGGATTTTTATAATCTGGTTGATATGAACCTCGACGCCGTCTTCTTCCCCAAATGTGTGGAGGACTTACAGATTTTCCGGCAGGAGGGTTGGCATTTCGAGCTCAACGACCCTTCCGGGGACATATCTTATAAAGGAGCTGTCTTCAATCAGATGAAAGAGTATTATTCTCAGCCTGATCCTATAAGTATATTAAAGAAGACTACTCGACAGGCCATTTTTCCAGAGACTACATATGGTTTTGACTGTGCAGGTGATCCAAAAGTTATTCCCCAATTGTCATTTAGGGAATTCAAGGAGTTCCACCGTAAATATTACCATCCCAGTAATGCAAGGATATGGTTTTATGGAGATGATGATCCAACTGAGCGCCTGCGCATTTTGAGTGAGTACCTGGATATGTTTGATGCAAGCTCAGCTCCAAATGAATCGAGGATTAAACCACAGAAACTATTTTCAGAACCAGTTAGGATTTTTAAGAAATATCCTTCTATTCCATTTGCTGATTTTAAAAAGAAAAACATGGTATGCCTCAGTTGGTTGCTCTGTGATGGGCCTCTAGACATGGAGACTGAGCGGACGATTCAGGTTTTGCTTCATCTTATGTCGGGAACTATTTTTTCTCCACTGAAAAGAATCTTGCTTGAAAATGGCTTTGTAGATGTTTTTATTGAGGTTTCTGTTGAACTCCTTCAACCTCTATTTAGTGTTGGGGTGATGAGTGTTTCTCATGATGACATTTTAAAAGTAGAAGAATTAGTCATGAGTACACTTAAGAAATTAGCAAAGGGAGGCTTTGATTCAGATACTTTGGAAGTATCCTTGAATGGGATGGAGTTTAATCTCAGGGAATACAATGATGAACCATATACTCGAGGCGTGTCCTTATTGGTTCGATCCATGGATAAATGGATATTTGATATGGATCCCTTTGAGCCATTAAAGTATGGGAAATTTTTAACGGCACTGAAATCCAGAATACAAAAGGAAGGCTCTAAGGCTGTTTTCTCTCCTCTGATAGAGAAATTCATTTTGCACAATCCACATAGAGTTGTGGTAGAAATGCAGCCCGATCCACAAAAGGCTTCTCGTGCTGAAAAAGCTGAGAAAGAAATTCTGGGGAAAGTTAAAGCAAGCTTAACAAATAAAGATCTCGCTGGCCTGGTACGTGCTACACAGGAGCTGCGACTGAAGCAGGCAACTCCTGACCCACCAGAAGCTATGAGAAGTGTTCCAAGCCTCTCTCTGCAAGACATTCCAAAGGAACCTACTACTGTTCCAAAAGAGGTTGACTATATCAATGGAGTTAAAGTATTGCAGCATGACCTCTTCACAAATGATGTCCTTTATACTGACATTGTGTTTGATATGAGTTCATCAGTAAAGCAAGAGCTTATTCCTTTGGTACCTCTTTTCTGTTACGCATTGCAAAACATGAATACAAAAGACACATGTTTTGTTGGTCTTCGTCACTTGATTGTAAGAAAAACTGGTGGAATATCAATTGAGTCAATGATACGGTGCACGGAAGATCCCTGTTGCCATATAATTGTTCGAGGGAAAGCCATGGCCAAACGTGCTGAAGATCTGTTTCACCTGATAAACTATCTTCTTCAAGAAGTCCAGTTTACAGACCACCGGTGGTTTAAGCAGCTTGTTTCCCATGCTATAGTGCAGTACCAACAAAGTGCTGAACTTGAAGGTCAGAACATTATTGCGTTAAGGATGGACGCAAAGCTAAATGTTTTTGGGTGGATTCGTGAACAAATGTGTGGTATCAGTCACTTGGAGTTTCTACAAGCGCTTGAGAAGAAAGTTGATCAAGATTGGGAAAGAATTTCTTCGTCTCTCGAGGAGATTCGCAAGTCCTTGTTTACTAGGAAAGGTTGTATAATTAATATGACTACTGAAGGGAAGAATCTTGCCAAATCTGAGCAGTTTGTTGGCAAATTTCTGGATTTGCTGCCTGGTAACTCTCCCTGTGCAACAACTACTTGGAATGCTAGACTACCTTGTGTAAATGAAGCCATTGTAGTACCTACTCCGTTAAACCATGTCGGAAAATCTGTTAACATTCATGACACTGGTTATCGGGTTAATGGAAGAACAGATGTTATCTCCACGTTTCTTGTTGGTGCACGTACATGGTTGCCTGACCGCACAGTAATTAGTGGTGCAGTGTATGCCTCTTATCGCTTTGATAATTACTCAGGAGCATGCTCTTTCTTACCTTCTGGTGACACCAACTTGTTGAAGACCCTTGACCGATATGATAACACTGGAGATTTTCTACGACAATTAGAAATGGATAATGATACTCTTAAAAAGGCCATTATTCAGGCACTTAAAAACGACTCATGCGAGTATCTTGATCCCAAAGCCAAAGGTTACAATAGTTTGGAGCAGTATTTAACGGGAGTCACAGAAGAAGAAAGGAAAAGGAGACATGAAGAGATGTTGTCAACCAGCTTGAAGGACTTCAAGGAATTTGCAGATGCATTTGACGCAGTCAAAGACAAAGGGGTTGTTGTTGCAATGGGAGCACCAAATGATGTTCATGCGGCACTAAAAGATCGACCTGACTTCTTTCAAGTAAAGACACCCTTCACCCGTGCAGAATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1081

Amino Acids

122.88

Weight (kDa)

6.83

Isoelectric Point (pI)

43.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 630, 750
AarI CACCTGC 1 cut(s) 860
AatII GACGTC 1 cut(s) 132
Acc16I TGCGCA 1 cut(s) 995
Acc36I ACCTGC 1 cut(s) 860
Acc65I GGTACC 1 cut(s) 2023
AccB1I GGYRCC 3 cut(s) 213, 377, 2023
AccBSI CCGCTC 1 cut(s) 1195
AccI GTMKAC 1 cut(s) 489
AccII CGCG 1 cut(s) 228
AccIII TCCGGA 2 cut(s) 124, 435
AciI CCGC 7 cut(s) 109, 138, 237, 254, 1195, 2776, 3179
AclWI GGATC 9 cut(s) 791, 869, 971, 1509, 1538, 1551, 1685, 2144, 2984
AcoI YGGCCR 1 cut(s) 2187
AcuI CTGAAG 5 cut(s) 69, 193, 1829, 2220, 2547
AcyI GRCGYC 2 cut(s) 129, 654
AfaI GTAC 9 cut(s) 326, 509, 1010, 1387, 1785, 2025, 2297, 2655, 2761
AfeI AGCGCT 1 cut(s) 2421
AfiI CCNNNNNNNGG 5 cut(s) 210, 448, 703, 736, 1446
AflII CTTAAG 1 cut(s) 1391
AflIII ACRYGT 1 cut(s) 2069
AgeI ACCGGT 2 cut(s) 374, 2256
AjnI CCWGG 3 cut(s) 1011, 1779, 2584
AjuI GAANNNNNNNTTGG 2 cut(s) 312, 344
Alw21I GWGCWC 5 cut(s) 269, 723, 2144, 2758, 3163
Alw26I GTCTC 4 cut(s) 839, 1181, 2469, 3055
Alw44I GTGCAC 2 cut(s) 2140, 2754
AlwI GGATC 9 cut(s) 791, 869, 971, 1509, 1538, 1551, 1685, 2144, 2984
AlwNI CAGNNNCTG 2 cut(s) 92, 1801
Ama87I CYCGRG 2 cut(s) 1491, 2468
Aor13HI TCCGGA 2 cut(s) 124, 435
Aor51HI AGCGCT 1 cut(s) 2421
AoxI GGCC 5 cut(s) 831, 1172, 1777, 2187, 2946
ApaLI GTGCAC 2 cut(s) 2140, 2754
ApeKI GCWGC 5 cut(s) 1684, 1801, 1936, 2269, 2581
ArsI GACNNNNNNTTYG 4 cut(s) 1964, 1996, 2057, 2089
AseI ATTAAT 1 cut(s) 2514
AsiGI ACCGGT 2 cut(s) 374, 2256
Asp700I GAANNNNTTC 3 cut(s) 1308, 2458, 3095
Asp718I GGTACC 1 cut(s) 2023
AspLEI GCGC 4 cut(s) 230, 990, 996, 2422
AspS9I GGNCC 2 cut(s) 546, 1172
AsuC2I CCSGG 1 cut(s) 736
AsuHPI GGTGA 7 cut(s) 286, 547, 884, 1345, 2204, 2867, 3217
AvaI CYCGRG 2 cut(s) 1491, 2468
AvaII GGWCC 1 cut(s) 546
BaeGI GKGCMC 3 cut(s) 382, 2144, 2758
BalI TGGCCA 1 cut(s) 2189
BamHI GGATCC 1 cut(s) 1543
BanI GGYRCC 3 cut(s) 213, 377, 2023
BanII GRGCYC 1 cut(s) 723
BauI CACGAG 1 cut(s) 1707
BbsI GAAGAC 5 cut(s) 652, 754, 824, 2075, 2879
Bbv12I GWGCWC 5 cut(s) 269, 723, 2144, 2758, 3163
BbvI GCAGC 5 cut(s) 1696, 1788, 1948, 2281, 2568
BccI CCATC 8 cut(s) 67, 201, 265, 442, 945, 1163, 1444, 2338
BceAI ACGGC 3 cut(s) 215, 641, 1596
BciT130I CCWGG 3 cut(s) 1013, 1781, 2586
BciVI GTATCC 1 cut(s) 1447
BclI TGATCA 1 cut(s) 2437
BcnI CCSGG 1 cut(s) 736
BcoDI GTCTC 4 cut(s) 839, 1181, 2469, 3055
BfaI CTAG 4 cut(s) 99, 1178, 2496, 2622
BfmI CTRYAG 1 cut(s) 2286
BfoI RGCGCY 2 cut(s) 991, 2423
BfrI CTTAAG 1 cut(s) 1391
BfuAI ACCTGC 1 cut(s) 860
BfuI GTATCC 1 cut(s) 1447
BglII AGATCT 2 cut(s) 1768, 2203
BisI GCNGC 6 cut(s) 1685, 1802, 1937, 2270, 2582, 3180
BlpI GCTNAGC 1 cut(s) 1033
BlsI GCNGC 6 cut(s) 1686, 1803, 1938, 2271, 2583, 3181
Bme1390I CCNGG 4 cut(s) 736, 1013, 1781, 2586
Bme18I GGWCC 1 cut(s) 546
BmeT110I CYCGRG 2 cut(s) 1491, 2468
BmgT120I GGNCC 2 cut(s) 546, 1172
BmiI GGNNCC 7 cut(s) 215, 379, 440, 547, 1545, 1884, 2025
BmrFI CCNGG 4 cut(s) 736, 1013, 1781, 2586
BmrI ACTGGG 1 cut(s) 936
BmsI GCATC 2 cut(s) 1015, 3103
BmuI ACTGGG 1 cut(s) 936
BpiI GAAGAC 5 cut(s) 652, 754, 824, 2075, 2879
BplI GAGNNNNNCTC 2 cut(s) 1330, 1362
BpmI CTGGAG 1 cut(s) 2919
Bpu1102I GCTNAGC 1 cut(s) 1033
BpuEI CTTGAG 1 cut(s) 2444
BpuMI CCSGG 1 cut(s) 736
BsaAI YACGTR 3 cut(s) 598, 1787, 2759
BsaBI GATNNNNATC 2 cut(s) 975, 1542
BsaHI GRCGYC 2 cut(s) 129, 654
BsaJI CCNNGG 4 cut(s) 549, 735, 1518, 2184
BsaWI WCCGGW 4 cut(s) 124, 374, 435, 2256
BsaXI ACNNNNNCTCC 4 cut(s) 326, 356, 1914, 1944
Bsc4I CCNNNNNNNGG 5 cut(s) 210, 448, 703, 736, 1446
Bse118I RCCGGY 2 cut(s) 374, 2256
Bse1I ACTGG 7 cut(s) 463, 942, 1082, 2113, 2242, 2707, 2902
Bse3DI GCAATG 2 cut(s) 2042, 3159
Bse8I GATNNNNATC 2 cut(s) 975, 1542
BseAI TCCGGA 2 cut(s) 124, 435
BseBI CCWGG 3 cut(s) 1013, 1781, 2586
BseDI CCNNGG 4 cut(s) 549, 735, 1518, 2184
BseGI GGATG 3 cut(s) 937, 1455, 2349
BseJI GATNNNNATC 2 cut(s) 975, 1542
BseLI CCNNNNNNNGG 5 cut(s) 210, 448, 703, 736, 1446
BseMI GCAATG 2 cut(s) 2042, 3159
BseNI ACTGG 7 cut(s) 463, 942, 1082, 2113, 2242, 2707, 2902
BseRI GAGGAG 6 cut(s) 21, 169, 211, 545, 1620, 2486
BseSI GKGCMC 3 cut(s) 382, 2144, 2758
BseXI GCAGC 5 cut(s) 1696, 1788, 1948, 2281, 2568
BseYI CCCAGC 1 cut(s) 298
BsgI GTGCAG 3 cut(s) 888, 2312, 2814
Bsh1236I CGCG 1 cut(s) 228
BshFI GGCC 5 cut(s) 833, 1174, 1779, 2189, 2948
BshNI GGYRCC 3 cut(s) 213, 377, 2023
BshTI ACCGGT 2 cut(s) 374, 2256
BsiHKAI GWGCWC 5 cut(s) 269, 723, 2144, 2758, 3163
BsiHKCI CYCGRG 2 cut(s) 1491, 2468
BsiSI CCGG 7 cut(s) 125, 361, 375, 436, 697, 735, 2257
BslFI GGGAC 4 cut(s) 116, 218, 559, 752
BslI CCNNNNNNNGG 5 cut(s) 210, 448, 703, 736, 1446
BsmAI GTCTC 4 cut(s) 839, 1181, 2469, 3055
BsmBI CGTCTC 1 cut(s) 2469
BsmFI GGGAC 4 cut(s) 116, 218, 559, 752
BsmI GAATGC 1 cut(s) 2623
BsnI GGCC 5 cut(s) 833, 1174, 1779, 2189, 2948
BsoBI CYCGRG 2 cut(s) 1491, 2468
Bsp1286I GDGCHC 6 cut(s) 269, 382, 723, 2144, 2758, 3163
Bsp13I TCCGGA 2 cut(s) 124, 435
Bsp1720I GCTNAGC 1 cut(s) 1033
Bsp19I CCATGG 2 cut(s) 1518, 2184
BspACI CCGC 7 cut(s) 109, 138, 237, 254, 1195, 2776, 3179
BspANI GGCC 5 cut(s) 833, 1174, 1779, 2189, 2948
BspEI TCCGGA 2 cut(s) 124, 435
BspFNI CGCG 1 cut(s) 228
BspHI TCATGA 3 cut(s) 1348, 1380, 2695
BspLI GGNNCC 7 cut(s) 215, 379, 440, 547, 1545, 1884, 2025
BspMI ACCTGC 1 cut(s) 860
BspPI GGATC 9 cut(s) 791, 869, 971, 1509, 1538, 1551, 1685, 2144, 2984
BspT107I GGYRCC 3 cut(s) 213, 377, 2023
BspTI CTTAAG 1 cut(s) 1391
BsrBI CCGCTC 1 cut(s) 1195
BsrDI GCAATG 2 cut(s) 2042, 3159
BsrFI RCCGGY 2 cut(s) 374, 2256
BsrI ACTGG 7 cut(s) 463, 942, 1082, 2113, 2242, 2707, 2902
BssAI RCCGGY 2 cut(s) 374, 2256
BssECI CCNNGG 4 cut(s) 549, 735, 1518, 2184
BssNAI GTATAC 1 cut(s) 490
BssNI GRCGYC 2 cut(s) 129, 654
BssSI CACGAG 1 cut(s) 1707
BssT1I CCWWGG 3 cut(s) 549, 1518, 2184
Bst1107I GTATAC 1 cut(s) 490
Bst2BI CACGAG 1 cut(s) 1707
Bst2UI CCWGG 3 cut(s) 1013, 1781, 2586
Bst4CI ACNGT 7 cut(s) 116, 494, 866, 926, 1894, 2139, 2782
Bst6I CTCTTC 4 cut(s) 88, 315, 1952, 3063
BstACI GRCGYC 2 cut(s) 129, 654
BstAFI CTTAAG 1 cut(s) 1391
BstAPI GCANNNNNTGC 1 cut(s) 2801
BstBAI YACGTR 3 cut(s) 598, 1787, 2759
BstC8I GCNNGC 6 cut(s) 992, 1030, 1753, 1777, 1815, 2836
BstDSI CCRYGG 2 cut(s) 1518, 2184
BstEII GGTNACC 1 cut(s) 313
BstF5I GGATG 3 cut(s) 937, 1455, 2349
BstFNI CGCG 1 cut(s) 228
BstH2I RGCGCY 2 cut(s) 991, 2423
BstHHI GCGC 4 cut(s) 230, 990, 996, 2422
BstMAI GTCTC 4 cut(s) 839, 1181, 2469, 3055
BstNI CCWGG 3 cut(s) 1013, 1781, 2586
BstNSI RCATGY 2 cut(s) 2073, 2838
BstPI GGTNACC 1 cut(s) 313
BstSCI CCNGG 4 cut(s) 734, 1011, 1779, 2584
BstSFI CTRYAG 1 cut(s) 2286
BstSLI GKGCMC 3 cut(s) 382, 2144, 2758
BstSNI TACGTA 1 cut(s) 598
BstUI CGCG 1 cut(s) 228
BstV1I GCAGC 5 cut(s) 1696, 1788, 1948, 2281, 2568
BstV2I GAAGAC 5 cut(s) 652, 754, 824, 2075, 2879
BstX2I RGATCY 4 cut(s) 1543, 1768, 2149, 2203
BstXI CCANNNNNNTGG 1 cut(s) 676
BstYI RGATCY 4 cut(s) 1543, 1768, 2149, 2203
BstZ17I GTATAC 1 cut(s) 490
BsuI GTATCC 1 cut(s) 1447
BsuRI GGCC 5 cut(s) 833, 1174, 1779, 2189, 2948
BtgI CCRYGG 2 cut(s) 1518, 2184
BtsCI GGATG 3 cut(s) 937, 1455, 2349
BtsI GCAGTG 1 cut(s) 2802
BtsIMutI CAGTG 7 cut(s) 443, 456, 1244, 1583, 2700, 2802, 2895
BveI ACCTGC 1 cut(s) 860
Cac8I GCNNGC 6 cut(s) 992, 1030, 1753, 1777, 1815, 2836
CaiI CAGNNNCTG 2 cut(s) 92, 1801
CciI TCATGA 3 cut(s) 1348, 1380, 2695
CfoI GCGC 4 cut(s) 230, 990, 996, 2422
Cfr10I RCCGGY 2 cut(s) 374, 2256
Cfr13I GGNCC 2 cut(s) 546, 1172
CseI GACGC 3 cut(s) 662, 2357, 3131
Csp6I GTAC 9 cut(s) 325, 508, 1009, 1386, 1784, 2024, 2296, 2654, 2760
CspAI ACCGGT 2 cut(s) 374, 2256
CspCI CAANNNNNGTGG 2 cut(s) 2728, 2763
CviQI GTAC 9 cut(s) 325, 508, 1009, 1386, 1784, 2024, 2296, 2654, 2760
DraI TTTAAA 2 cut(s) 1129, 1362
EaeI YGGCCR 1 cut(s) 2187
Eam1104I CTCTTC 4 cut(s) 88, 315, 1952, 3063
EarI CTCTTC 4 cut(s) 88, 315, 1952, 3063
EciI GGCGGA 1 cut(s) 243
Ecl136II GAGCTC 1 cut(s) 721
Eco105I TACGTA 1 cut(s) 598
Eco130I CCWWGG 3 cut(s) 549, 1518, 2184
Eco24I GRGCYC 1 cut(s) 723
Eco47I GGWCC 1 cut(s) 546
Eco47III AGCGCT 1 cut(s) 2421
Eco53kI GAGCTC 1 cut(s) 721
Eco57I CTGAAG 5 cut(s) 69, 193, 1829, 2220, 2547
Eco88I CYCGRG 2 cut(s) 1491, 2468
Eco91I GGTNACC 1 cut(s) 313
EcoICRI GAGCTC 1 cut(s) 721
EcoO109I RGGNCCY 1 cut(s) 546
EcoO65I GGTNACC 1 cut(s) 313
EcoRI GAATTC 1 cut(s) 908
EcoRII CCWGG 3 cut(s) 1011, 1779, 2584
EcoT14I CCWWGG 3 cut(s) 549, 1518, 2184
EcoT22I ATGCAT 1 cut(s) 3118
EcoT38I GRGCYC 1 cut(s) 723
ErhI CCWWGG 3 cut(s) 549, 1518, 2184
Esp3I CGTCTC 1 cut(s) 2469
FalI AAGNNNNNCTT 8 cut(s) 339, 371, 1397, 1429, 2443, 2475, 3206, 3238
FaqI GGGAC 4 cut(s) 116, 218, 559, 752
FauI CCCGC 1 cut(s) 244
FauNDI CATATG 1 cut(s) 853
FbaI TGATCA 1 cut(s) 2437
FblI GTMKAC 1 cut(s) 489
Fnu4HI GCNGC 6 cut(s) 1685, 1802, 1937, 2270, 2582, 3180
FokI GGATG 3 cut(s) 924, 1462, 2356
FriOI GRGCYC 1 cut(s) 723
Fsp4HI GCNGC 6 cut(s) 1685, 1802, 1937, 2270, 2582, 3180
FspBI CTAG 4 cut(s) 99, 1178, 2496, 2622
FspI TGCGCA 1 cut(s) 995
GlaI GCGC 4 cut(s) 229, 989, 995, 2421
GluI GCNGC 6 cut(s) 1685, 1802, 1937, 2270, 2582, 3180
GsaI CCCAGC 1 cut(s) 302
GsuI CTGGAG 1 cut(s) 2919
HaeII RGCGCY 2 cut(s) 991, 2423
HaeIII GGCC 5 cut(s) 833, 1174, 1779, 2189, 2948
HapII CCGG 7 cut(s) 125, 361, 375, 436, 697, 735, 2257
HgaI GACGC 3 cut(s) 662, 2357, 3131
HhaI GCGC 4 cut(s) 230, 990, 996, 2422
Hin1I GRCGYC 2 cut(s) 129, 654
Hin6I GCGC 4 cut(s) 228, 988, 994, 2420
HinP1I GCGC 4 cut(s) 228, 988, 994, 2420
HincII GTYRAC 3 cut(s) 1909, 2689, 3081
HindII GTYRAC 3 cut(s) 1909, 2689, 3081
HindIII AAGCTT 2 cut(s) 348, 1753
HpaI GTTAAC 1 cut(s) 2689
HpaII CCGG 7 cut(s) 125, 361, 375, 436, 697, 735, 2257
HphI GGTGA 7 cut(s) 286, 547, 884, 1345, 2204, 2867, 3217
Hpy99I CGWCG 2 cut(s) 407, 656
HpyCH4III ACNGT 7 cut(s) 116, 494, 866, 926, 1894, 2139, 2782
HpyCH4IV ACGT 6 cut(s) 129, 597, 1786, 2194, 2741, 2758
HpySE526I ACGT 6 cut(s) 129, 597, 1786, 2194, 2741, 2758
Hsp92I GRCGYC 2 cut(s) 129, 654
HspAI GCGC 4 cut(s) 228, 988, 994, 2420
Kpn2I TCCGGA 2 cut(s) 124, 435
KpnI GGTACC 1 cut(s) 2027
Ksp22I TGATCA 1 cut(s) 2437
KspAI GTTAAC 1 cut(s) 2689
LmnI GCTCC 8 cut(s) 100, 156, 755, 1042, 1798, 2831, 3019, 3158
Lsp1109I GCAGC 5 cut(s) 1696, 1788, 1948, 2281, 2568
LweI GCATC 2 cut(s) 1015, 3103
MaeI CTAG 4 cut(s) 99, 1178, 2496, 2622
MaeII ACGT 6 cut(s) 129, 597, 1786, 2194, 2741, 2758
MaeIII GTNAC 9 cut(s) 313, 601, 2036, 2087, 2399, 2588, 2855, 3005, 3037
MbiI CCGCTC 1 cut(s) 1195
MfeI CAATTG 2 cut(s) 893, 2121
MflI RGATCY 4 cut(s) 1543, 1768, 2149, 2203
MhlI GDGCHC 6 cut(s) 269, 382, 723, 2144, 2758, 3163
MlsI TGGCCA 1 cut(s) 2189
MluNI TGGCCA 1 cut(s) 2189
MlyI GAGTC 4 cut(s) 115, 2135, 2966, 3045
MmeI TCCRAC 4 cut(s) 143, 423, 1004, 2656
Mox20I TGGCCA 1 cut(s) 2189
Mph1103I ATGCAT 1 cut(s) 3118
MroI TCCGGA 2 cut(s) 124, 435
MroXI GAANNNNTTC 3 cut(s) 1308, 2458, 3095
MscI TGGCCA 1 cut(s) 2189
MslI CAYNNNNRTG 3 cut(s) 262, 392, 2761
Msp20I TGGCCA 1 cut(s) 2189
MspCI CTTAAG 1 cut(s) 1391
MspI CCGG 7 cut(s) 125, 361, 375, 436, 697, 735, 2257
MspR9I CCNGG 4 cut(s) 736, 1013, 1781, 2586
MunI CAATTG 2 cut(s) 893, 2121
Mva1269I GAATGC 1 cut(s) 2623
MvaI CCWGG 3 cut(s) 1013, 1781, 2586
MvnI CGCG 1 cut(s) 228
NciI CCSGG 1 cut(s) 736
NcoI CCATGG 2 cut(s) 1518, 2184
NdeI CATATG 1 cut(s) 853
NlaIV GGNNCC 7 cut(s) 215, 379, 440, 547, 1545, 1884, 2025
NmuCI GTSAC 4 cut(s) 2087, 2399, 2855, 3037
NsbI TGCGCA 1 cut(s) 995
NsiI ATGCAT 1 cut(s) 3118
NspI RCATGY 2 cut(s) 2073, 2838
PaeI GCATGC 1 cut(s) 2838
PaeR7I CTCGAG 2 cut(s) 1491, 2468
PagI TCATGA 3 cut(s) 1348, 1380, 2695
PaqCI CACCTGC 1 cut(s) 860
PciI ACATGT 1 cut(s) 2069
PcsI WCGNNNNNNNCGW 2 cut(s) 723, 2976
PctI GAATGC 1 cut(s) 2623
PdmI GAANNNNTTC 3 cut(s) 1308, 2458, 3095
PflFI GACNNNGTC 2 cut(s) 656, 3125
PinAI ACCGGT 2 cut(s) 374, 2256
PkrI GCNGC 6 cut(s) 1686, 1803, 1938, 2271, 2583, 3181
PleI GAGTC 4 cut(s) 115, 2134, 2966, 3044
PpsI GAGTC 4 cut(s) 115, 2134, 2966, 3044
Ppu21I YACGTR 3 cut(s) 598, 1787, 2759
PpuMI RGGWCCY 1 cut(s) 546
PscI ACATGT 1 cut(s) 2069
PshBI ATTAAT 1 cut(s) 2514
PsiI TTATAA 2 cut(s) 630, 750
Psp124BI GAGCTC 1 cut(s) 723
Psp5II RGGWCCY 1 cut(s) 546
Psp6I CCWGG 3 cut(s) 1011, 1779, 2584
PspEI GGTNACC 1 cut(s) 313
PspFI CCCAGC 1 cut(s) 298
PspGI CCWGG 3 cut(s) 1011, 1779, 2584
PspN4I GGNNCC 7 cut(s) 215, 379, 440, 547, 1545, 1884, 2025
PspPI GGNCC 2 cut(s) 546, 1172
PspPPI RGGWCCY 1 cut(s) 546
PspXI VCTCGAGB 1 cut(s) 1491
PstNI CAGNNNCTG 2 cut(s) 92, 1801
PsuI RGATCY 4 cut(s) 1543, 1768, 2149, 2203
PsyI GACNNNGTC 2 cut(s) 656, 3125
RsaI GTAC 9 cut(s) 326, 509, 1010, 1387, 1785, 2025, 2297, 2655, 2761
RsaNI GTAC 9 cut(s) 325, 508, 1009, 1386, 1784, 2024, 2296, 2654, 2760
RseI CAYNNNNRTG 3 cut(s) 262, 392, 2761
SacI GAGCTC 1 cut(s) 723
SatI GCNGC 6 cut(s) 1685, 1802, 1937, 2270, 2582, 3180
Sau96I GGNCC 2 cut(s) 546, 1172
SchI GAGTC 4 cut(s) 115, 2135, 2966, 3045
ScrFI CCNGG 4 cut(s) 736, 1013, 1781, 2586
SduI GDGCHC 6 cut(s) 269, 382, 723, 2144, 2758, 3163
SfaNI GCATC 2 cut(s) 1015, 3103
SfcI CTRYAG 1 cut(s) 2286
Sfr274I CTCGAG 2 cut(s) 1491, 2468
SgrAI CRCCGGYG 1 cut(s) 2256
SinI GGWCC 1 cut(s) 546
SlaI CTCGAG 2 cut(s) 1491, 2468
SmiMI CAYNNNNRTG 3 cut(s) 262, 392, 2761
SmlI CTYRAG 4 cut(s) 1391, 1491, 2423, 2468
SmoI CTYRAG 4 cut(s) 1391, 1491, 2423, 2468
SnaBI TACGTA 1 cut(s) 598
SphI GCATGC 1 cut(s) 2838
SsiI CCGC 7 cut(s) 109, 138, 237, 254, 1195, 2776, 3179
SspI AATATT 1 cut(s) 932
SspMI CTAG 4 cut(s) 99, 1178, 2496, 2622
SstI GAGCTC 1 cut(s) 723
StyD4I CCNGG 4 cut(s) 734, 1011, 1779, 2584
StyI CCWWGG 3 cut(s) 549, 1518, 2184
TaaI ACNGT 7 cut(s) 116, 494, 866, 926, 1894, 2139, 2782
TaiI ACGT 6 cut(s) 132, 600, 1789, 2197, 2744, 2761
TaqII GACCGA 1 cut(s) 2898
TatI WGTACW 2 cut(s) 324, 1385
TauI GCSGC 1 cut(s) 3182
TscAI CASTG 7 cut(s) 450, 463, 1251, 1590, 2707, 2802, 2902
TseFI GTSAC 4 cut(s) 2087, 2399, 2855, 3037
TseI GCWGC 5 cut(s) 1684, 1801, 1936, 2269, 2581
Tsp45I GTSAC 4 cut(s) 2087, 2399, 2855, 3037
TspGWI ACGGA 3 cut(s) 496, 2159, 2652
TspRI CASTG 7 cut(s) 450, 463, 1251, 1590, 2707, 2802, 2902
Tth111I GACNNNGTC 2 cut(s) 656, 3125
Vha464I CTTAAG 1 cut(s) 1391
VneI GTGCAC 2 cut(s) 2140, 2754
VpaK11BI GGWCC 1 cut(s) 546
VspI ATTAAT 1 cut(s) 2514
XbaI TCTAGA 1 cut(s) 1177
XceI RCATGY 2 cut(s) 2073, 2838
XhoI CTCGAG 2 cut(s) 1491, 2468
XmiI GTMKAC 1 cut(s) 489
XmnI GAANNNNTTC 3 cut(s) 1308, 2458, 3095
XspI CTAG 4 cut(s) 99, 1178, 2496, 2622
ZraI GACGTC 1 cut(s) 130
Zsp2I ATGCAT 1 cut(s) 3118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.