Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0004488

Physical Location & Seq

Genomic Coordinates Reverse (-)

13825607 .. 13834771

Gene Structure 9165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG088700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2949 bp

ATGGAGAGAGCAGCTCTCCTTCGCTCTTCTCTTTCCTGCACTAATAGAGCCTTCTTCTCCTTCCGCACCCCCTCTATCCCATTCTTTCGATTCTCTCGCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTCTCAGAACCCATCGCCACCGTCCGATTCTCCGACCCTCCTCCGGCCGCCCCCTCCGCCGCACCAGCCTCTTACCACTGCCCGCCGCTTCCACCCACTTCGCCACGCGCTTCTCCTCCCTCTCCCCACGCGCTGTCGCCACGCCGTTAACCCCCTCGCCGTCAGAGTTCTCTGGGGTTTCCGATGAGGTTGCGGAACAGCTGGGATTCGAGAAGGTCGCCGAAGAGTTTATAGGAGAGTGTAAATCCAAAGCTCTGCTCTTTAAGCACAAAAAGACCGGTGCTCAGGTGATCTCTGTTTCCAACGACGATGAGAACAAGGTTTTCGGCATTGTTTTCCGAACACCACCAAATGATTCGACTGGAATCCCACACATTTTGGAGCACAGTGTGTTGTGTGGTTCTAGGAAATACCCTTTGAAAGAGCCGTTTGTGGAATTGTTGAAAGGGAGCTTGAATACTTTTCTCAATGCATTCACCTATCCTGATAGGACTTGCTACCCTGTTGCCTCCACAAATTCAAAGGATTTCTATAATCTGGTCGATGTGTACCTGGATGCTGTGTTCTTTCCAAAATGCGTGGAGGATTTCCAGACTTTCCAGCAGGAGGGCTGGCACTATGAGCTCAACGATCCTTCTGAAGACATATCTTATAAAGGAGTTGTTTTCAATGAGATGAAAGGGGTGTACTCCCAGCCTGATAATATATTAGGGCGGATTGCTCAACAGGCTCTTTTTCCAGACAACACCTATGGTGTGGACAGTGGAGGTGATCCAAAAGTTATTCCCAAGCTGACTTATGAGGAATTTAAGGAATTTCACCGTAAATATTACCATCCGAGCAATGCCAGGATTTGGTTCTATGGAGATGATGATCCAACTGAGCGCCTACGCATTTTAAGTGAGTACCTAGACATGTTTGATGCAAGTTCAGCTCCAAATGAATCAAGGGTTCAAACACAAAAACTATTTTCGGAACCAGTTAGGATTTCTGAGACATATCCTTCTGGTGAAGGCGGCGACTTAAAGAAAAAAAGCATGGTATGCATCAATTGGCTGCTCTCTGAGAAACCCCTGGACTTGGAAACTGAGCTTGCCCTTGGGTTTTTAGATCATCTTATGTTGGGAACTCCTGCGTCTCCATTGAGGAAAATATTGCTGGAAAGTGGCTTGGGAGAAGCTATCATTGGAGGCGGGGTTGAAGATGAGCTTCTTCAACCTCAATTTAGTATCGGGTTGAAGGGTGTTTCTCAAGATAATATTCAAAAGGTAGAAGAATTAGTCATGAGTACACTTAAAAAATTAGCGGAAGAAGGGTTCGATACAGCTGCTGTAGAAGCATCCATGAATACCATTGAGTTTTCTCTCAGGGAAAACAACACCGGATCATTTCCTCGTGGTTTGTCCTTAATGCTTCGATCCATGGGAAAGTGGATATATGATATGGATCCATTTCAGCCATTGAAGTATGAGAAACCTTTACTGGCACTAAAAGCAAGAATAGAACAGGAAGGCTCTAAAGCCGTTTTCTCTCCTTTAATAGAGAAATTTATTTTGAACAATCCTCATCGAGTTGTGGTAGAAATGCAGCCTGATCCAGAAAAAGCTTCTCGTGATGAAGCAGCCGAGAAAGAAATTTTGGAGAAAGTAAAAGCAGGTATGACGGAAGAAGATCTTGCTGAGCTAGCACGCGCTACACAAGAACTGAAACTGAAGCAGGAAACTCCTGATCCACCAGAAGCTCTGAGAAGTGTTCCAAGCCTCTCTCTGCTTGACATTCCAAAGGAACCTATTCCTGTTCCCACAGAGGTTGGGGATATCAATGGAGTTAAAGTTTTGCAGCATGACCTTTTCACAAATGATGTTCTCTACACTGAAGTTGTGTTCAATATGAGTTCACTCAAGCAAGAGCTCCTTCCCTTGGTACCTCTTTTTTGTCAATCATTGCTGGAGATGGGAACCAAAGATTTGAGTTTTGTGGAACTTAATCAGTTGATTGGAAGAAAAACTGGAGGGATATCAGTTTATCCACTGACATCATCTGTCCGGGGCAAGAAGGATCCCTGTAGCCATATAATTGTTCGAGGCAAAGCCATGGCAGGACGTGCGGATGATCTATTTCATCTGATCAACTGTATTCTTCAAGAAGTCCAATTTACAGACCAGCAGCGGTTTAAGCAGTTTGTTTCCCAAAGCAAAGCTAGAATGGAGAACCGATTGAGAGGTAGCGGTCATGGAATTGCTGCTGCAAGGATGGATGCAAAGCTAAATGTTGCAGGGTGGATTTCTGAACAAATGGGTGGCTTCAGTTACTTGGAGTTTCTACAAGCTCTTGAAGAGAAAGTTGATAATGATTGGGAGAGAATATCTTCATCTCTTGAGGAGATTCGCAAGTCCTTACTTTCACAGGAGGGTTGCTTGATTAATATGACTGCTGAAGGAAAGAATCTTACCAACTCTGAGAAGTTTGTTCGCGAATTTCTTGATTTGCTGCCTCGCAAATCTCCCCTTGCAACAACTACTTGGAATGCTCGATTACCTTCTACAAATGAAGCCATTGTTATACCTACTCAGGTTAATTATGTTGGAAAAGCAGCCAACATTTATGACACTGGGTATCAACTTAATGGAAGTGCATATGTTATCTCTAAATACATAAGTAATACATGGTTGTGGGATCGTGTACGAGTTAGTGGTGGAGCATATGGAGGCTTTTGCGACTTCGATAGTCACTCTGGTATAACTATTATCTGTTTTATCTTTGTATGGAATTTTAAGTGCTATCAGAACCTAACATTGTCGAATTTGATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0010035 GO:0010038 GO:0010467 GO:0016485 GO:0016787 GO:0019538 GO:0031967 GO:0031974 GO:0031975 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0051604 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

M16C_assoc Peptidase_M16 Peptidase_M16_C

Protein Analysis

982

Amino Acids

110.0

Weight (kDa)

5.68

Isoelectric Point (pI)

44.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M16	PF00675	162 - 237	3.2e-06	Insulinase (Peptidase family M16)
Peptidase_M16_C	PF05193	309 - 495	2.8e-27	Peptidase M16 inactive domain
M16C_assoc	PF08367	574 - 823	7.2e-77	Peptidase M16C associated
PreP_C	PF22516	895 - 960	9.9e-31	PreP C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49630 AT1G49630 AT1G49630 AT1G49630 AT1G49630 AT3G19170 AT3G19170
fragaria_vesca	FvH4_2g06380 FvH4_2g06380 FvH4_2g06380 FvH4_2g06380 FvH4_2g06380
malus_domestica	MD05G1078000.v1.1 MD10G1092200.v1.1 MD11G1150900.v1.1
prunus_persica	Prupe.8G122100_v2.0.a1 Prupe.8G122200_v2.0.a1
pyrus_communis	pycom05g07050 pycom05g07160 pycom10g07580
rosa_chinensis	RchiOBHm_Chr6g0258261
rosa_laevigata	RLG00000014634
rosa_multiflora	Rmu_sc0004230.1_g000015
rosa_roxburghii	Rroxscaffold_178G00437220 Rroxscaffold_7G00205380
rosa_rugosa	Rorug05G0579700
rosa_samantha	Rh6AG097600 Rh6BG088700 Rh6CG084700 Rh6DG080800
rosa_wichuraiana	Rw6G008290 Rw6G008350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	789
Acc36I	ACCTGC	1 cut(s)	1781
Acc65I	GGTACC	1 cut(s)	2059
AccB1I	GGYRCC	1 cut(s)	2059
AccB7I	CCANNNNNTGG	1 cut(s)	990
AccII	CGCG	4 cut(s)	244, 267, 1827, 2610
AcoI	YGGCCR	1 cut(s)	181
AcsI	RAATTY	8 cut(s)	652, 941, 950, 1682, 1770, 2612, 2905, 2938
AcuI	CTGAAG	5 cut(s)	795, 1868, 2031, 2425, 2592
AdeI	CACNNNGTG	1 cut(s)	526
AfaI	GTAC	6 cut(s)	686, 824, 1043, 1426, 2061, 2820
AfiI	CCNNNNNNNGG	5 cut(s)	179, 742, 990, 1216, 2056
AflIII	ACRYGT	1 cut(s)	1050
AgeI	ACCGGT	1 cut(s)	413
AjiI	CACGTC	1 cut(s)	2240
AjnI	CCWGG	3 cut(s)	687, 983, 1209
AjuI	GAANNNNNNNTTGG	4 cut(s)	1305, 1337, 1757, 1789
AloI	GAACNNNNNNTCC	4 cut(s)	683, 715, 1436, 1468
Alw21I	GWGCWC	4 cut(s)	421, 522, 762, 2049
Alw26I	GTCTC	2 cut(s)	1124, 1278
AlwNI	CAGNNNCTG	1 cut(s)	1466
AoxI	GGCC	1 cut(s)	181
ApoI	RAATTY	8 cut(s)	652, 941, 950, 1682, 1770, 2612, 2905, 2938
AseI	ATTAAT	1 cut(s)	2559
AsiGI	ACCGGT	1 cut(s)	413
Asp700I	GAANNNNTTC	2 cut(s)	1926, 2503
Asp718I	GGTACC	1 cut(s)	2059
AspLEI	GCGC	4 cut(s)	246, 269, 1023, 1829
AsuC2I	CCSGG	1 cut(s)	2183
AsuHPI	GGTGA	5 cut(s)	436, 604, 917, 947, 1157
AsuNHI	GCTAGC	1 cut(s)	1819
BamHI	GGATCC	2 cut(s)	1582, 2194
BanI	GGYRCC	1 cut(s)	2059
BanII	GRGCYC	2 cut(s)	762, 2049
BauI	CACGAG	2 cut(s)	1530, 1746
BbsI	GAAGAC	1 cut(s)	783
Bbv12I	GWGCWC	4 cut(s)	421, 522, 762, 2049
BccI	CCATC	4 cut(s)	156, 978, 2083, 2383
BceAI	ACGGC	4 cut(s)	265, 280, 547, 1643
BcgI	CGANNNNNNTGC	4 cut(s)	308, 342, 1445, 1479
BciT130I	CCWGG	3 cut(s)	689, 985, 1211
BclI	TGATCA	1 cut(s)	2262
BcnI	CCSGG	1 cut(s)	2183
BcoDI	GTCTC	2 cut(s)	1124, 1278
BfaI	CTAG	4 cut(s)	540, 1046, 1820, 2337
BfmI	CTRYAG	2 cut(s)	1467, 2200
BfoI	RGCGCY	1 cut(s)	1024
BfuAI	ACCTGC	1 cut(s)	1781
BglII	AGATCT	1 cut(s)	1807
BlpI	GCTNAGC	1 cut(s)	1815
Bme1390I	CCNGG	4 cut(s)	689, 985, 1211, 2183
BmgBI	CACGTC	1 cut(s)	2240
BmiI	GGNNCC	6 cut(s)	1113, 1584, 1923, 2061, 2095, 2196
BmrFI	CCNGG	4 cut(s)	689, 985, 1211, 2183
BmrI	ACTGGG	1 cut(s)	2757
BmsI	GCATC	5 cut(s)	682, 1048, 1191, 1484, 2383
BmtI	GCTAGC	1 cut(s)	1823
BmuI	ACTGGG	1 cut(s)	2757
BpiI	GAAGAC	1 cut(s)	783
BplI	GAGNNNNNCTC	2 cut(s)	30, 32
BpmI	CTGGAG	2 cut(s)	2105, 2166
Bpu10I	CCTNAGC	1 cut(s)	420
Bpu1102I	GCTNAGC	1 cut(s)	1815
BpuEI	CTTGAG	3 cut(s)	1371, 2021, 2534
BpuMI	CCSGG	1 cut(s)	2183
BsaBI	GATNNNNATC	2 cut(s)	1008, 1581
BsaJI	CCNNGG	6 cut(s)	1209, 1234, 1557, 2055, 2182, 2229
BsaWI	WCCGGW	2 cut(s)	413, 1517
BsaXI	ACNNNNNCTCC	4 cut(s)	1317, 1347, 1953, 1983
Bsc4I	CCNNNNNNNGG	5 cut(s)	179, 742, 990, 1216, 2056
Bse118I	RCCGGY	1 cut(s)	413
Bse1I	ACTGG	5 cut(s)	502, 1115, 1623, 2149, 2752
Bse3DI	GCAATG	2 cut(s)	985, 2078
Bse8I	GATNNNNATC	2 cut(s)	1008, 1581
BseBI	CCWGG	3 cut(s)	689, 985, 1211
BseDI	CCNNGG	6 cut(s)	1209, 1234, 1557, 2055, 2182, 2229
BseGI	GGATG	6 cut(s)	697, 970, 1475, 2251, 2394, 2398
BseJI	GATNNNNATC	2 cut(s)	1008, 1581
BseLI	CCNNNNNNNGG	5 cut(s)	179, 742, 990, 1216, 2056
BseMI	GCAATG	2 cut(s)	985, 2078
BseNI	ACTGG	5 cut(s)	502, 1115, 1623, 2149, 2752
BseRI	GAGGAG	5 cut(s)	91, 94, 166, 241, 2531
BseX3I	CGGCCG	1 cut(s)	181
BseYI	CCCAGC	2 cut(s)	337, 828
BsgI	GTGCAG	1 cut(s)	22
Bsh1236I	CGCG	4 cut(s)	244, 267, 1827, 2610
Bsh1285I	CGRYCG	1 cut(s)	184
BshFI	GGCC	1 cut(s)	183
BshNI	GGYRCC	1 cut(s)	2059
BshTI	ACCGGT	1 cut(s)	413
BsiEI	CGRYCG	1 cut(s)	184
BsiHKAI	GWGCWC	4 cut(s)	421, 522, 762, 2049
BsiSI	CCGG	4 cut(s)	180, 414, 1518, 2182
BslI	CCNNNNNNNGG	5 cut(s)	179, 742, 990, 1216, 2056
BsmAI	GTCTC	2 cut(s)	1124, 1278
BsmBI	CGTCTC	1 cut(s)	1278
BsmI	GAATGC	2 cut(s)	608, 2668
BsnI	GGCC	1 cut(s)	183
Bsp1286I	GDGCHC	4 cut(s)	421, 522, 762, 2049
Bsp1720I	GCTNAGC	1 cut(s)	1815
Bsp19I	CCATGG	2 cut(s)	1557, 2229
Bsp68I	TCGCGA	1 cut(s)	2610
BspANI	GGCC	1 cut(s)	183
BspFNI	CGCG	4 cut(s)	244, 267, 1827, 2610
BspHI	TCATGA	1 cut(s)	1419
BspLI	GGNNCC	6 cut(s)	1113, 1584, 1923, 2061, 2095, 2196
BspMI	ACCTGC	1 cut(s)	1781
BspOI	GCTAGC	1 cut(s)	1823
BspQI	GCTCTTC	1 cut(s)	31
BspT107I	GGYRCC	1 cut(s)	2059
BsrDI	GCAATG	2 cut(s)	985, 2078
BsrFI	RCCGGY	1 cut(s)	413
BsrI	ACTGG	5 cut(s)	502, 1115, 1623, 2149, 2752
BssAI	RCCGGY	1 cut(s)	413
BssECI	CCNNGG	6 cut(s)	1209, 1234, 1557, 2055, 2182, 2229
BssSI	CACGAG	2 cut(s)	1530, 1746
BssT1I	CCWWGG	4 cut(s)	1234, 1557, 2055, 2229
Bst2BI	CACGAG	2 cut(s)	1530, 1746
Bst2UI	CCWGG	3 cut(s)	689, 985, 1211
Bst4CI	ACNGT	5 cut(s)	158, 524, 899, 959, 2270
Bst6I	CTCTTC	4 cut(s)	31, 112, 354, 2466
BstAPI	GCANNNNNTGC	2 cut(s)	1179, 2240
BstC8I	GCNNGC	5 cut(s)	219, 749, 1230, 1821, 1825
BstDSI	CCRYGG	2 cut(s)	1557, 2229
BstF5I	GGATG	6 cut(s)	697, 970, 1475, 2251, 2394, 2398
BstFNI	CGCG	4 cut(s)	244, 267, 1827, 2610
BstH2I	RGCGCY	1 cut(s)	1024
BstHHI	GCGC	4 cut(s)	246, 269, 1023, 1829
BstMAI	GTCTC	2 cut(s)	1124, 1278
BstMCI	CGRYCG	1 cut(s)	184
BstNI	CCWGG	3 cut(s)	689, 985, 1211
BstNSI	RCATGY	1 cut(s)	1054
BstSCI	CCNGG	4 cut(s)	687, 983, 1209, 2181
BstSFI	CTRYAG	2 cut(s)	1467, 2200
BstUI	CGCG	4 cut(s)	244, 267, 1827, 2610
BstV2I	GAAGAC	1 cut(s)	783
BstX2I	RGATCY	3 cut(s)	1582, 1807, 2194
BstYI	RGATCY	3 cut(s)	1582, 1807, 2194
BstZI	CGGCCG	1 cut(s)	181
BsuRI	GGCC	1 cut(s)	183
BtgI	CCRYGG	2 cut(s)	1557, 2229
BtgZI	GCGATG	1 cut(s)	134
BtrI	CACGTC	1 cut(s)	2240
BtsCI	GGATG	6 cut(s)	697, 970, 1475, 2251, 2394, 2398
BtsI	GCAGTG	1 cut(s)	212
BtsIMutI	CAGTG	6 cut(s)	212, 529, 904, 2007, 2165, 2745
BtuMI	TCGCGA	1 cut(s)	2610
BveI	ACCTGC	1 cut(s)	1781
Cac8I	GCNNGC	5 cut(s)	219, 749, 1230, 1821, 1825
CaiI	CAGNNNCTG	1 cut(s)	1466
CciI	TCATGA	1 cut(s)	1419
CfoI	GCGC	4 cut(s)	246, 269, 1023, 1829
Cfr10I	RCCGGY	1 cut(s)	413
CseI	GACGC	1 cut(s)	1260
Csp6I	GTAC	6 cut(s)	685, 823, 1042, 1425, 2060, 2819
CspAI	ACCGGT	1 cut(s)	413
CspCI	CAANNNNNGTGG	6 cut(s)	495, 530, 696, 731, 1927, 1962
CviAII	CATG	9 cut(s)	1051, 1174, 1420, 1480, 1558, 1979, 2230, 2369, 2802
CviQI	GTAC	6 cut(s)	685, 823, 1042, 1425, 2060, 2819
DraIII	CACNNNGTG	1 cut(s)	526
EaeI	YGGCCR	1 cut(s)	181
EagI	CGGCCG	1 cut(s)	181
Eam1104I	CTCTTC	4 cut(s)	31, 112, 354, 2466
EarI	CTCTTC	4 cut(s)	31, 112, 354, 2466
EciI	GGCGGA	2 cut(s)	182, 865
Ecl136II	GAGCTC	2 cut(s)	760, 2047
EclXI	CGGCCG	1 cut(s)	181
Eco130I	CCWWGG	4 cut(s)	1234, 1557, 2055, 2229
Eco24I	GRGCYC	2 cut(s)	762, 2049
Eco32I	GATATC	2 cut(s)	1954, 2154
Eco52I	CGGCCG	1 cut(s)	181
Eco53kI	GAGCTC	2 cut(s)	760, 2047
Eco57I	CTGAAG	5 cut(s)	795, 1868, 2031, 2425, 2592
EcoICRI	GAGCTC	2 cut(s)	760, 2047
EcoRII	CCWGG	3 cut(s)	687, 983, 1209
EcoRV	GATATC	2 cut(s)	1954, 2154
EcoT14I	CCWWGG	4 cut(s)	1234, 1557, 2055, 2229
EcoT22I	ATGCAT	2 cut(s)	610, 1184
EcoT38I	GRGCYC	2 cut(s)	762, 2049
ErhI	CCWWGG	4 cut(s)	1234, 1557, 2055, 2229
Esp3I	CGTCTC	1 cut(s)	1278
FaeI	CATG	9 cut(s)	1054, 1177, 1423, 1483, 1561, 1982, 2233, 2372, 2805
FalI	AAGNNNNNCTT	6 cut(s)	1329, 1361, 1794, 1826, 2034, 2066
FatI	CATG	9 cut(s)	1050, 1173, 1419, 1479, 1557, 1978, 2229, 2368, 2801
FauI	CCCGC	2 cut(s)	226, 1322
FauNDI	CATATG	2 cut(s)	2773, 2839
FbaI	TGATCA	1 cut(s)	2262
FokI	GGATG	6 cut(s)	704, 957, 1462, 2258, 2401, 2405
FriOI	GRGCYC	2 cut(s)	762, 2049
FspBI	CTAG	4 cut(s)	540, 1046, 1820, 2337
GlaI	GCGC	4 cut(s)	245, 268, 1022, 1828
GsaI	CCCAGC	2 cut(s)	341, 832
GsuI	CTGGAG	2 cut(s)	2105, 2166
HaeII	RGCGCY	1 cut(s)	1024
HaeIII	GGCC	1 cut(s)	183
HapII	CCGG	4 cut(s)	180, 414, 1518, 2182
HgaI	GACGC	1 cut(s)	1260
HhaI	GCGC	4 cut(s)	246, 269, 1023, 1829
Hin1II	CATG	9 cut(s)	1054, 1177, 1423, 1483, 1561, 1982, 2233, 2372, 2805
Hin6I	GCGC	4 cut(s)	244, 267, 1021, 1827
HinP1I	GCGC	4 cut(s)	244, 267, 1021, 1827
HincII	GTYRAC	1 cut(s)	285
HindII	GTYRAC	1 cut(s)	285
HindIII	AAGCTT	1 cut(s)	1740
HinfI	GANTC	8 cut(s)	90, 163, 342, 491, 501, 1079, 2521, 2581
HpaI	GTTAAC	1 cut(s)	285
HpaII	CCGG	4 cut(s)	180, 414, 1518, 2182
HphI	GGTGA	5 cut(s)	436, 604, 917, 947, 1157
Hpy166II	GTNNAC	7 cut(s)	285, 685, 823, 895, 1427, 2033, 2819
Hpy8I	GTNNAC	7 cut(s)	285, 685, 823, 895, 1427, 2033, 2819
Hpy99I	CGWCG	1 cut(s)	446
HpyCH4III	ACNGT	5 cut(s)	158, 524, 899, 959, 2270
HpyCH4IV	ACGT	1 cut(s)	2239
HpySE526I	ACGT	1 cut(s)	2239
Hsp92II	CATG	9 cut(s)	1054, 1177, 1423, 1483, 1561, 1982, 2233, 2372, 2805
HspAI	GCGC	4 cut(s)	244, 267, 1021, 1827
KpnI	GGTACC	1 cut(s)	2063
Ksp22I	TGATCA	1 cut(s)	2262
KspAI	GTTAAC	1 cut(s)	285
LguI	GCTCTTC	1 cut(s)	31
LmnI	GCTCC	6 cut(s)	104, 517, 585, 1075, 2052, 2834
LweI	GCATC	5 cut(s)	682, 1048, 1191, 1484, 2383
MaeI	CTAG	4 cut(s)	540, 1046, 1820, 2337
MaeII	ACGT	1 cut(s)	2239
MaeIII	GTNAC	2 cut(s)	2444, 2864
MfeI	CAATTG	1 cut(s)	1186
MflI	RGATCY	3 cut(s)	1582, 1807, 2194
MhlI	GDGCHC	4 cut(s)	421, 522, 762, 2049
MmeI	TCCRAC	4 cut(s)	193, 462, 1037, 2701
Mph1103I	ATGCAT	2 cut(s)	610, 1184
MroXI	GAANNNNTTC	2 cut(s)	1926, 2503
MslI	CAYNNNNRTG	1 cut(s)	2806
MspA1I	CMGCKG	3 cut(s)	337, 1463, 2305
MspI	CCGG	4 cut(s)	180, 414, 1518, 2182
MspR9I	CCNGG	4 cut(s)	689, 985, 1211, 2183
MunI	CAATTG	1 cut(s)	1186
Mva1269I	GAATGC	2 cut(s)	608, 2668
MvaI	CCWGG	3 cut(s)	689, 985, 1211
MvnI	CGCG	4 cut(s)	244, 267, 1827, 2610
NciI	CCSGG	1 cut(s)	2183
NcoI	CCATGG	2 cut(s)	1557, 2229
NdeI	CATATG	2 cut(s)	2773, 2839
NheI	GCTAGC	1 cut(s)	1819
NlaIII	CATG	9 cut(s)	1054, 1177, 1423, 1483, 1561, 1982, 2233, 2372, 2805
NlaIV	GGNNCC	6 cut(s)	1113, 1584, 1923, 2061, 2095, 2196
NmeAIII	GCCGAG	1 cut(s)	1786
NmuCI	GTSAC	1 cut(s)	2864
NruI	TCGCGA	1 cut(s)	2610
NsiI	ATGCAT	2 cut(s)	610, 1184
NspI	RCATGY	1 cut(s)	1054
PagI	TCATGA	1 cut(s)	1419
PciI	ACATGT	1 cut(s)	1050
PciSI	GCTCTTC	1 cut(s)	31
PctI	GAATGC	2 cut(s)	608, 2668
PdmI	GAANNNNTTC	2 cut(s)	1926, 2503
PfeI	GAWTC	8 cut(s)	90, 163, 342, 491, 501, 1079, 2521, 2581
PflMI	CCANNNNNTGG	1 cut(s)	990
PinAI	ACCGGT	1 cut(s)	413
PscI	ACATGT	1 cut(s)	1050
PshBI	ATTAAT	1 cut(s)	2559
PsiI	TTATAA	1 cut(s)	789
Psp124BI	GAGCTC	2 cut(s)	762, 2049
Psp6I	CCWGG	3 cut(s)	687, 983, 1209
PspFI	CCCAGC	2 cut(s)	337, 828
PspGI	CCWGG	3 cut(s)	687, 983, 1209
PspN4I	GGNNCC	6 cut(s)	1113, 1584, 1923, 2061, 2095, 2196
PstNI	CAGNNNCTG	1 cut(s)	1466
PsuI	RGATCY	3 cut(s)	1582, 1807, 2194
PvuII	CAGCTG	2 cut(s)	337, 1463
RruI	TCGCGA	1 cut(s)	2610
RsaI	GTAC	6 cut(s)	686, 824, 1043, 1426, 2061, 2820
RsaNI	GTAC	6 cut(s)	685, 823, 1042, 1425, 2060, 2819
RseI	CAYNNNNRTG	1 cut(s)	2806
SacI	GAGCTC	2 cut(s)	762, 2049
SapI	GCTCTTC	1 cut(s)	31
ScrFI	CCNGG	4 cut(s)	689, 985, 1211, 2183
SduI	GDGCHC	4 cut(s)	421, 522, 762, 2049
SfaNI	GCATC	5 cut(s)	682, 1048, 1191, 1484, 2383
SfcI	CTRYAG	2 cut(s)	1467, 2200
SmiMI	CAYNNNNRTG	1 cut(s)	2806
SmlI	CTYRAG	3 cut(s)	1386, 2036, 2513
SmoI	CTYRAG	3 cut(s)	1386, 2036, 2513
SspI	AATATT	3 cut(s)	965, 1290, 1396
SspMI	CTAG	4 cut(s)	540, 1046, 1820, 2337
SstI	GAGCTC	2 cut(s)	762, 2049
StyD4I	CCNGG	4 cut(s)	687, 983, 1209, 2181
StyI	CCWWGG	4 cut(s)	1234, 1557, 2055, 2229
TaaI	ACNGT	5 cut(s)	158, 524, 899, 959, 2270
TaiI	ACGT	1 cut(s)	2242
TatI	WGTACW	2 cut(s)	822, 1424
TauI	GCSGC	4 cut(s)	186, 198, 224, 1155
TfiI	GAWTC	8 cut(s)	90, 163, 342, 491, 501, 1079, 2521, 2581
TscAI	CASTG	6 cut(s)	219, 529, 904, 2014, 2172, 2752
TseFI	GTSAC	1 cut(s)	2864
Tsp45I	GTSAC	1 cut(s)	2864
TspDTI	ATGAA	7 cut(s)	827, 1092, 1496, 1767, 2246, 2496, 2700
TspGWI	ACGGA	1 cut(s)	1814
TspRI	CASTG	6 cut(s)	219, 529, 904, 2014, 2172, 2752
Van91I	CCANNNNNTGG	1 cut(s)	990
VspI	ATTAAT	1 cut(s)	2559
XapI	RAATTY	8 cut(s)	652, 941, 950, 1682, 1770, 2612, 2905, 2938
XceI	RCATGY	1 cut(s)	1054
XmnI	GAANNNNTTC	2 cut(s)	1926, 2503
XspI	CTAG	4 cut(s)	540, 1046, 1820, 2337
Zsp2I	ATGCAT	2 cut(s)	610, 1184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.