Presequence protease 1, chloroplastic mitochondrial-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49630 AT1G49630 AT1G49630 AT1G49630 AT1G49630 AT3G19170 AT3G19170 |
| fragaria_vesca | FvH4_2g06380 FvH4_2g06380 FvH4_2g06380 FvH4_2g06380 FvH4_2g06380 |
| malus_domestica | MD05G1078000.v1.1 MD10G1092200.v1.1 MD11G1150900.v1.1 |
| prunus_persica | Prupe.8G122100_v2.0.a1 Prupe.8G122200_v2.0.a1 |
| pyrus_communis | pycom05g07050 pycom05g07160 pycom10g07580 |
| rosa_chinensis | RchiOBHm_Chr6g0258261 |
| rosa_laevigata | RLG00000014634 |
| rosa_multiflora | Rmu_sc0004230.1_g000015 |
| rosa_roxburghii | Rroxscaffold_178G00437220 Rroxscaffold_7G00205380 |
| rosa_rugosa | Rorug05G0579700 |
| rosa_samantha | Rh6AG097600 Rh6BG088700 Rh6CG084700 Rh6DG080800 |
| rosa_wichuraiana | Rw6G008290 Rw6G008350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 731 |
| Acc65I | GGTACC | 1 cut(s) | 1009 |
| AccB1I | GGYRCC | 1 cut(s) | 1009 |
| AccII | CGCG | 3 cut(s) | 777, 1361, 1848 |
| AciI | CCGC | 5 cut(s) | 102, 1255, 1314, 1361, 2011 |
| AclWI | GGATC | 7 cut(s) | 204, 478, 498, 527, 540, 809, 1770 |
| AcsI | RAATTY | 4 cut(s) | 632, 720, 1562, 1895 |
| AcuI | CTGAAG | 3 cut(s) | 818, 981, 1542 |
| AfaI | GTAC | 3 cut(s) | 376, 1011, 1770 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1006, 1138 |
| AjiI | CACGTC | 1 cut(s) | 1190 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 255, 287, 707, 739 |
| AleI | CACNNNNGTG | 1 cut(s) | 1821 |
| Alw21I | GWGCWC | 1 cut(s) | 999 |
| Alw26I | GTCTC | 2 cut(s) | 74, 1688 |
| AlwI | GGATC | 7 cut(s) | 204, 478, 498, 527, 540, 809, 1770 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 416 |
| ApoI | RAATTY | 4 cut(s) | 632, 720, 1562, 1895 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 386, 418 |
| AseI | ATTAAT | 1 cut(s) | 1509 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 876, 1453, 2084 |
| Asp718I | GGTACC | 1 cut(s) | 1009 |
| AspLEI | GCGC | 1 cut(s) | 779 |
| AsuC2I | CCSGG | 1 cut(s) | 1133 |
| AsuHPI | GGTGA | 2 cut(s) | 107, 116 |
| AsuNHI | GCTAGC | 1 cut(s) | 769 |
| BamHI | GGATCC | 1 cut(s) | 532 |
| BanI | GGYRCC | 1 cut(s) | 1009 |
| BanII | GRGCYC | 1 cut(s) | 999 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 279, 311 |
| BauI | CACGAG | 2 cut(s) | 480, 696 |
| Bbv12I | GWGCWC | 1 cut(s) | 999 |
| BccI | CCATC | 3 cut(s) | 1033, 1333, 1877 |
| BceAI | ACGGC | 1 cut(s) | 593 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 395, 429 |
| BclI | TGATCA | 1 cut(s) | 1212 |
| BcnI | CCSGG | 1 cut(s) | 1133 |
| BcoDI | GTCTC | 2 cut(s) | 74, 1688 |
| BfaI | CTAG | 3 cut(s) | 770, 1287, 1910 |
| BfmI | CTRYAG | 2 cut(s) | 417, 1150 |
| BfuAI | ACCTGC | 1 cut(s) | 731 |
| BglII | AGATCT | 1 cut(s) | 757 |
| BlpI | GCTNAGC | 1 cut(s) | 765 |
| Bme1390I | CCNGG | 1 cut(s) | 1133 |
| BmgBI | CACGTC | 1 cut(s) | 1190 |
| BmiI | GGNNCC | 5 cut(s) | 63, 534, 873, 1011, 1045 |
| BmrFI | CCNGG | 1 cut(s) | 1133 |
| BmrI | ACTGGG | 2 cut(s) | 1707, 1899 |
| BmsI | GCATC | 8 cut(s) | 141, 434, 1135, 1333, 1975, 1998, 2101, 2156 |
| BmtI | GCTAGC | 1 cut(s) | 773 |
| BmuI | ACTGGG | 2 cut(s) | 1707, 1899 |
| BpmI | CTGGAG | 3 cut(s) | 1055, 1116, 2136 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 765 |
| BpuEI | CTTGAG | 1 cut(s) | 1484 |
| BpuMI | CCSGG | 1 cut(s) | 1133 |
| BsaBI | GATNNNNATC | 1 cut(s) | 531 |
| BsaJI | CCNNGG | 5 cut(s) | 159, 184, 507, 1132, 1179 |
| BsaWI | WCCGGW | 1 cut(s) | 1820 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 267, 297, 903, 933 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1006, 1138 |
| Bse1I | ACTGG | 7 cut(s) | 65, 249, 472, 573, 1099, 1702, 1894 |
| Bse3DI | GCAATG | 2 cut(s) | 536, 1028 |
| Bse8I | GATNNNNATC | 1 cut(s) | 531 |
| BseDI | CCNNGG | 5 cut(s) | 159, 184, 507, 1132, 1179 |
| BseGI | GGATG | 4 cut(s) | 425, 1344, 1348, 1924 |
| BseJI | GATNNNNATC | 1 cut(s) | 531 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1006, 1138 |
| BseMI | GCAATG | 2 cut(s) | 536, 1028 |
| BseMII | CTCAG | 9 cut(s) | 69, 141, 165, 466, 702, 756, 821, 1559, 1670 |
| BseNI | ACTGG | 7 cut(s) | 65, 249, 472, 573, 1099, 1702, 1894 |
| BseRI | GAGGAG | 1 cut(s) | 1481 |
| Bsh1236I | CGCG | 3 cut(s) | 777, 1361, 1848 |
| BshNI | GGYRCC | 1 cut(s) | 1009 |
| BsiHKAI | GWGCWC | 1 cut(s) | 999 |
| BsiSI | CCGG | 2 cut(s) | 1132, 1821 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1006, 1138 |
| BsmAI | GTCTC | 2 cut(s) | 74, 1688 |
| BsmI | GAATGC | 2 cut(s) | 1618, 2212 |
| Bsp1286I | GDGCHC | 1 cut(s) | 999 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 765 |
| Bsp19I | CCATGG | 2 cut(s) | 507, 1179 |
| Bsp68I | TCGCGA | 1 cut(s) | 1848 |
| BspACI | CCGC | 5 cut(s) | 102, 1255, 1314, 1361, 2011 |
| BspCNI | CTCAG | 9 cut(s) | 70, 142, 166, 465, 703, 757, 822, 1558, 1669 |
| BspFNI | CGCG | 3 cut(s) | 777, 1361, 1848 |
| BspHI | TCATGA | 1 cut(s) | 369 |
| BspLI | GGNNCC | 5 cut(s) | 63, 534, 873, 1011, 1045 |
| BspMI | ACCTGC | 1 cut(s) | 731 |
| BspOI | GCTAGC | 1 cut(s) | 773 |
| BspPI | GGATC | 7 cut(s) | 204, 478, 498, 527, 540, 809, 1770 |
| BspT107I | GGYRCC | 1 cut(s) | 1009 |
| BsrDI | GCAATG | 2 cut(s) | 536, 1028 |
| BsrI | ACTGG | 7 cut(s) | 65, 249, 472, 573, 1099, 1702, 1894 |
| BssECI | CCNNGG | 5 cut(s) | 159, 184, 507, 1132, 1179 |
| BssSI | CACGAG | 2 cut(s) | 480, 696 |
| BssT1I | CCWWGG | 4 cut(s) | 159, 184, 507, 1179 |
| Bst2BI | CACGAG | 2 cut(s) | 480, 696 |
| Bst4CI | ACNGT | 1 cut(s) | 1220 |
| Bst6I | CTCTTC | 1 cut(s) | 1416 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1190, 2111 |
| BstC8I | GCNNGC | 4 cut(s) | 180, 771, 775, 1413 |
| BstDSI | CCRYGG | 2 cut(s) | 507, 1179 |
| BstF5I | GGATG | 4 cut(s) | 425, 1344, 1348, 1924 |
| BstFNI | CGCG | 3 cut(s) | 777, 1361, 1848 |
| BstHHI | GCGC | 1 cut(s) | 779 |
| BstMAI | GTCTC | 2 cut(s) | 74, 1688 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 17, 422, 578, 770, 1190, 1261, 2111 |
| BstSCI | CCNGG | 1 cut(s) | 1131 |
| BstSFI | CTRYAG | 2 cut(s) | 417, 1150 |
| BstUI | CGCG | 3 cut(s) | 777, 1361, 1848 |
| BstX2I | RGATCY | 2 cut(s) | 532, 757 |
| BstYI | RGATCY | 2 cut(s) | 532, 757 |
| BtgI | CCRYGG | 2 cut(s) | 507, 1179 |
| BtrI | CACGTC | 1 cut(s) | 1190 |
| BtsCI | GGATG | 4 cut(s) | 425, 1344, 1348, 1924 |
| BtsI | GCAGTG | 1 cut(s) | 2148 |
| BtsIMutI | CAGTG | 5 cut(s) | 465, 913, 957, 1115, 2148 |
| BtuMI | TCGCGA | 1 cut(s) | 1848 |
| BveI | ACCTGC | 1 cut(s) | 731 |
| Cac8I | GCNNGC | 4 cut(s) | 180, 771, 775, 1413 |
| CaiI | CAGNNNCTG | 1 cut(s) | 416 |
| CciI | TCATGA | 1 cut(s) | 369 |
| CfoI | GCGC | 1 cut(s) | 779 |
| CseI | GACGC | 1 cut(s) | 2174 |
| Csp6I | GTAC | 3 cut(s) | 375, 1010, 1769 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 877, 912 |
| CviAII | CATG | 8 cut(s) | 124, 338, 370, 430, 508, 1180, 1319, 1752 |
| CviQI | GTAC | 3 cut(s) | 375, 1010, 1769 |
| Eam1104I | CTCTTC | 1 cut(s) | 1416 |
| EarI | CTCTTC | 1 cut(s) | 1416 |
| Ecl136II | GAGCTC | 1 cut(s) | 997 |
| Eco130I | CCWWGG | 4 cut(s) | 159, 184, 507, 1179 |
| Eco24I | GRGCYC | 1 cut(s) | 999 |
| Eco32I | GATATC | 1 cut(s) | 1104 |
| Eco53kI | GAGCTC | 1 cut(s) | 997 |
| Eco57I | CTGAAG | 3 cut(s) | 818, 981, 1542 |
| EcoICRI | GAGCTC | 1 cut(s) | 997 |
| EcoRV | GATATC | 1 cut(s) | 1104 |
| EcoT14I | CCWWGG | 4 cut(s) | 159, 184, 507, 1179 |
| EcoT22I | ATGCAT | 1 cut(s) | 134 |
| EcoT38I | GRGCYC | 1 cut(s) | 999 |
| ErhI | CCWWGG | 4 cut(s) | 159, 184, 507, 1179 |
| FaeI | CATG | 8 cut(s) | 127, 341, 373, 433, 511, 1183, 1322, 1755 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 744, 776, 984, 1016 |
| FatI | CATG | 8 cut(s) | 123, 337, 369, 429, 507, 1179, 1318, 1751 |
| FauI | CCCGC | 1 cut(s) | 1354 |
| FauNDI | CATATG | 2 cut(s) | 1723, 1789 |
| FbaI | TGATCA | 1 cut(s) | 1212 |
| FokI | GGATG | 4 cut(s) | 412, 1351, 1355, 1931 |
| FriOI | GRGCYC | 1 cut(s) | 999 |
| FspBI | CTAG | 3 cut(s) | 770, 1287, 1910 |
| GlaI | GCGC | 1 cut(s) | 778 |
| GsuI | CTGGAG | 3 cut(s) | 1055, 1116, 2136 |
| HapII | CCGG | 2 cut(s) | 1132, 1821 |
| HgaI | GACGC | 1 cut(s) | 2174 |
| HhaI | GCGC | 1 cut(s) | 779 |
| Hin1II | CATG | 8 cut(s) | 127, 341, 373, 433, 511, 1183, 1322, 1755 |
| Hin6I | GCGC | 1 cut(s) | 777 |
| HinP1I | GCGC | 1 cut(s) | 777 |
| HincII | GTYRAC | 2 cut(s) | 2070, 2164 |
| HindII | GTYRAC | 2 cut(s) | 2070, 2164 |
| HindIII | AAGCTT | 1 cut(s) | 690 |
| HinfI | GANTC | 4 cut(s) | 29, 1471, 1531, 1967 |
| HpaII | CCGG | 2 cut(s) | 1132, 1821 |
| HphI | GGTGA | 2 cut(s) | 107, 116 |
| Hpy166II | GTNNAC | 3 cut(s) | 1769, 2070, 2164 |
| Hpy188I | TCNGA | 8 cut(s) | 61, 79, 151, 831, 1212, 1375, 1548, 2032 |
| Hpy8I | GTNNAC | 3 cut(s) | 1769, 2070, 2164 |
| HpyCH4III | ACNGT | 1 cut(s) | 1220 |
| HpyCH4IV | ACGT | 1 cut(s) | 1189 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 17, 422, 578, 770, 1190, 1261, 2111 |
| HpySE526I | ACGT | 1 cut(s) | 1189 |
| Hsp92II | CATG | 8 cut(s) | 127, 341, 373, 433, 511, 1183, 1322, 1755 |
| HspAI | GCGC | 1 cut(s) | 777 |
| KpnI | GGTACC | 1 cut(s) | 1013 |
| Ksp22I | TGATCA | 1 cut(s) | 1212 |
| LmnI | GCTCC | 3 cut(s) | 25, 1002, 1784 |
| LweI | GCATC | 8 cut(s) | 141, 434, 1135, 1333, 1975, 1998, 2101, 2156 |
| MaeI | CTAG | 3 cut(s) | 770, 1287, 1910 |
| MaeII | ACGT | 1 cut(s) | 1189 |
| MaeIII | GTNAC | 4 cut(s) | 104, 857, 1394, 1814 |
| MfeI | CAATTG | 3 cut(s) | 136, 1953, 2106 |
| MflI | RGATCY | 2 cut(s) | 532, 757 |
| MhlI | GDGCHC | 1 cut(s) | 999 |
| MmeI | TCCRAC | 2 cut(s) | 1346, 1651 |
| Mph1103I | ATGCAT | 1 cut(s) | 134 |
| MroXI | GAANNNNTTC | 3 cut(s) | 876, 1453, 2084 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1756, 1821 |
| MspA1I | CMGCKG | 3 cut(s) | 413, 710, 1255 |
| MspI | CCGG | 2 cut(s) | 1132, 1821 |
| MspR9I | CCNGG | 1 cut(s) | 1133 |
| MunI | CAATTG | 3 cut(s) | 136, 1953, 2106 |
| Mva1269I | GAATGC | 2 cut(s) | 1618, 2212 |
| MvnI | CGCG | 3 cut(s) | 777, 1361, 1848 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 17, 422, 578, 770, 1190, 1261, 2111 |
| NciI | CCSGG | 1 cut(s) | 1133 |
| NcoI | CCATGG | 2 cut(s) | 507, 1179 |
| NdeI | CATATG | 2 cut(s) | 1723, 1789 |
| NheI | GCTAGC | 1 cut(s) | 769 |
| NlaIII | CATG | 8 cut(s) | 127, 341, 373, 433, 511, 1183, 1322, 1755 |
| NlaIV | GGNNCC | 5 cut(s) | 63, 534, 873, 1011, 1045 |
| NmuCI | GTSAC | 3 cut(s) | 104, 857, 1814 |
| NruI | TCGCGA | 1 cut(s) | 1848 |
| NsiI | ATGCAT | 1 cut(s) | 134 |
| OliI | CACNNNNGTG | 1 cut(s) | 1821 |
| PagI | TCATGA | 1 cut(s) | 369 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 402 |
| PctI | GAATGC | 2 cut(s) | 1618, 2212 |
| PdmI | GAANNNNTTC | 3 cut(s) | 876, 1453, 2084 |
| PfeI | GAWTC | 4 cut(s) | 29, 1471, 1531, 1967 |
| PshBI | ATTAAT | 1 cut(s) | 1509 |
| Psp124BI | GAGCTC | 1 cut(s) | 999 |
| PspN4I | GGNNCC | 5 cut(s) | 63, 534, 873, 1011, 1045 |
| PstNI | CAGNNNCTG | 1 cut(s) | 416 |
| PsuI | RGATCY | 2 cut(s) | 532, 757 |
| PvuII | CAGCTG | 2 cut(s) | 413, 710 |
| RruI | TCGCGA | 1 cut(s) | 1848 |
| RsaI | GTAC | 3 cut(s) | 376, 1011, 1770 |
| RsaNI | GTAC | 3 cut(s) | 375, 1010, 1769 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1756, 1821 |
| SacI | GAGCTC | 1 cut(s) | 999 |
| ScrFI | CCNGG | 1 cut(s) | 1133 |
| SduI | GDGCHC | 1 cut(s) | 999 |
| SfaNI | GCATC | 8 cut(s) | 141, 434, 1135, 1333, 1975, 1998, 2101, 2156 |
| SfcI | CTRYAG | 2 cut(s) | 417, 1150 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1756, 1821 |
| SmlI | CTYRAG | 1 cut(s) | 1463 |
| SmoI | CTYRAG | 1 cut(s) | 1463 |
| SsiI | CCGC | 5 cut(s) | 102, 1255, 1314, 1361, 2011 |
| SspI | AATATT | 2 cut(s) | 240, 2064 |
| SspMI | CTAG | 3 cut(s) | 770, 1287, 1910 |
| SstI | GAGCTC | 1 cut(s) | 999 |
| StyD4I | CCNGG | 1 cut(s) | 1131 |
| StyI | CCWWGG | 4 cut(s) | 159, 184, 507, 1179 |
| TaaI | ACNGT | 1 cut(s) | 1220 |
| TaiI | ACGT | 1 cut(s) | 1192 |
| TaqI | TCGA | 5 cut(s) | 405, 502, 655, 1168, 1618 |
| TauI | GCSGC | 1 cut(s) | 2014 |
| TfiI | GAWTC | 4 cut(s) | 29, 1471, 1531, 1967 |
| TscAI | CASTG | 5 cut(s) | 472, 913, 964, 1122, 2148 |
| TseFI | GTSAC | 3 cut(s) | 104, 857, 1814 |
| Tsp45I | GTSAC | 3 cut(s) | 104, 857, 1814 |
| TspRI | CASTG | 5 cut(s) | 472, 913, 964, 1122, 2148 |
| VspI | ATTAAT | 1 cut(s) | 1509 |
| XapI | RAATTY | 4 cut(s) | 632, 720, 1562, 1895 |
| XmnI | GAANNNNTTC | 3 cut(s) | 876, 1453, 2084 |
| XspI | CTAG | 3 cut(s) | 770, 1287, 1910 |
| Zsp2I | ATGCAT | 1 cut(s) | 134 |