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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G19430 AT3G19430 |
| fragaria_vesca | FvH4_2g05430 FvH4_3g29630 FvH4_5g10780 |
| malus_domestica | MD05G1087500.v1.1 MD11G1162000.v1.1 |
| prunus_persica | Prupe.4G282900_v2.0.a1 Prupe.6G124900_v2.0.a1 Prupe.6G125100_v2.0.a1 Prupe.6G125200_v2.0.a1 Prupe.6G125400_v2.0.a1 Prupe.8G132700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0054971 RchiOBHm_Chr6g0255721 |
| rosa_laevigata | RLG00000014819 RLG00000034951 |
| rosa_multiflora | Rmu_sc0003653.1_g000016 Rmu_sc0003653.1_g000019 Rmu_sc0004354.1_g000011 Rmu_sc0007003.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00025530 Rroxscaffold_1G00025550 Rroxscaffold_1G00025610 Rroxscaffold_7G00209740 |
| rosa_rugosa | Rorug05G0289500.1 Rorug05G0289600 Rorug05G0560700 |
| rosa_samantha | Rh5AG359400 Rh5AG359700 Rh5BG370700 Rh5CG393000 Rh5DG384200 Rh5DG384300 Rh5DG384500 Rh6AG078800 Rh6BG071900 Rh6CG070000 Rh6DG067200 |
| rosa_wichuraiana | Rw6G006790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 421, 902, 992 |
| AciI | CCGC | 3 cut(s) | 723, 915, 940 |
| AclWI | GGATC | 1 cut(s) | 1094 |
| AcuI | CTGAAG | 1 cut(s) | 1134 |
| AcvI | CACGTG | 1 cut(s) | 921 |
| AcyI | GRCGYC | 1 cut(s) | 993 |
| AfaI | GTAC | 1 cut(s) | 584 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 921, 1035, 1036, 1286, 1344 |
| AflIII | ACRYGT | 1 cut(s) | 610 |
| AgsI | TTSAA | 5 cut(s) | 13, 549, 1067, 1073, 1307 |
| AjnI | CCWGG | 5 cut(s) | 79, 631, 688, 995, 1034 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 265, 297 |
| AluBI | AGCT | 7 cut(s) | 302, 374, 892, 1080, 1385, 1416, 1422 |
| AluI | AGCT | 7 cut(s) | 302, 374, 892, 1080, 1385, 1416, 1422 |
| Alw26I | GTCTC | 3 cut(s) | 202, 474, 779 |
| AlwI | GGATC | 1 cut(s) | 1094 |
| AoxI | GGCC | 2 cut(s) | 564, 1238 |
| ApeKI | GCWGC | 2 cut(s) | 56, 59 |
| AspLEI | GCGC | 3 cut(s) | 825, 995, 1337 |
| AspS9I | GGNCC | 2 cut(s) | 856, 1239 |
| AsuC2I | CCSGG | 1 cut(s) | 1256 |
| AsuHPI | GGTGA | 9 cut(s) | 252, 393, 429, 447, 546, 727, 964, 1055, 1294 |
| AvaII | GGWCC | 1 cut(s) | 856 |
| BaeGI | GKGCMC | 4 cut(s) | 161, 227, 907, 1107 |
| BanI | GGYRCC | 3 cut(s) | 421, 902, 992 |
| BanII | GRGCYC | 1 cut(s) | 969 |
| BbrPI | CACGTG | 1 cut(s) | 921 |
| BbsI | GAAGAC | 1 cut(s) | 1125 |
| BbvI | GCAGC | 2 cut(s) | 68, 71 |
| BceAI | ACGGC | 2 cut(s) | 451, 766 |
| BciT130I | CCWGG | 5 cut(s) | 81, 633, 690, 997, 1036 |
| BciVI | GTATCC | 1 cut(s) | 1036 |
| BclI | TGATCA | 1 cut(s) | 682 |
| BcnI | CCSGG | 1 cut(s) | 1256 |
| BcoDI | GTCTC | 3 cut(s) | 202, 474, 779 |
| BfmI | CTRYAG | 1 cut(s) | 369 |
| BfoI | RGCGCY | 1 cut(s) | 996 |
| BfuI | GTATCC | 1 cut(s) | 1036 |
| BisI | GCNGC | 3 cut(s) | 57, 60, 724 |
| BlsI | GCNGC | 3 cut(s) | 58, 61, 725 |
| BmcAI | AGTACT | 1 cut(s) | 584 |
| Bme1390I | CCNGG | 6 cut(s) | 81, 633, 690, 997, 1036, 1256 |
| Bme18I | GGWCC | 1 cut(s) | 856 |
| BmgT120I | GGNCC | 2 cut(s) | 856, 1239 |
| BmiI | GGNNCC | 5 cut(s) | 423, 857, 904, 994, 1270 |
| BmrFI | CCNGG | 6 cut(s) | 81, 633, 690, 997, 1036, 1256 |
| BmrI | ACTGGG | 1 cut(s) | 615 |
| BmsI | GCATC | 2 cut(s) | 36, 741 |
| BmuI | ACTGGG | 1 cut(s) | 615 |
| BpiI | GAAGAC | 1 cut(s) | 1125 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 182, 214 |
| BpmI | CTGGAG | 1 cut(s) | 63 |
| BpuEI | CTTGAG | 3 cut(s) | 282, 1108, 1438 |
| BpuMI | CCSGG | 1 cut(s) | 1256 |
| BsaAI | YACGTR | 1 cut(s) | 921 |
| BsaHI | GRCGYC | 1 cut(s) | 993 |
| BsaJI | CCNNGG | 7 cut(s) | 80, 631, 748, 898, 1035, 1095, 1326 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 921, 1035, 1036, 1286, 1344 |
| Bse118I | RCCGGY | 2 cut(s) | 418, 1279 |
| Bse1I | ACTGG | 3 cut(s) | 621, 668, 859 |
| Bse3DI | GCAATG | 3 cut(s) | 109, 864, 1338 |
| BseBI | CCWGG | 5 cut(s) | 81, 633, 690, 997, 1036 |
| BseDI | CCNNGG | 7 cut(s) | 80, 631, 748, 898, 1035, 1095, 1326 |
| BseGI | GGATG | 3 cut(s) | 644, 870, 1444 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 921, 1035, 1036, 1286, 1344 |
| BseMI | GCAATG | 3 cut(s) | 109, 864, 1338 |
| BseNI | ACTGG | 3 cut(s) | 621, 668, 859 |
| BseSI | GKGCMC | 4 cut(s) | 161, 227, 907, 1107 |
| BseXI | GCAGC | 2 cut(s) | 68, 71 |
| BshFI | GGCC | 2 cut(s) | 566, 1240 |
| BshNI | GGYRCC | 3 cut(s) | 421, 902, 992 |
| BsiSI | CCGG | 3 cut(s) | 419, 1255, 1280 |
| BslFI | GGGAC | 2 cut(s) | 857, 938 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 921, 1035, 1036, 1286, 1344 |
| BsmAI | GTCTC | 3 cut(s) | 202, 474, 779 |
| BsmBI | CGTCTC | 1 cut(s) | 474 |
| BsmFI | GGGAC | 2 cut(s) | 857, 938 |
| BsnI | GGCC | 2 cut(s) | 566, 1240 |
| Bsp1286I | GDGCHC | 5 cut(s) | 161, 227, 907, 969, 1107 |
| Bsp143I | GATC | 3 cut(s) | 682, 1086, 1174 |
| BspACI | CCGC | 3 cut(s) | 723, 915, 940 |
| BspANI | GGCC | 2 cut(s) | 566, 1240 |
| BspLI | GGNNCC | 5 cut(s) | 423, 857, 904, 994, 1270 |
| BspPI | GGATC | 1 cut(s) | 1094 |
| BspQI | GCTCTTC | 1 cut(s) | 899 |
| BspT107I | GGYRCC | 3 cut(s) | 421, 902, 992 |
| BsrDI | GCAATG | 3 cut(s) | 109, 864, 1338 |
| BsrFI | RCCGGY | 2 cut(s) | 418, 1279 |
| BsrI | ACTGG | 3 cut(s) | 621, 668, 859 |
| BssAI | RCCGGY | 2 cut(s) | 418, 1279 |
| BssECI | CCNNGG | 7 cut(s) | 80, 631, 748, 898, 1035, 1095, 1326 |
| BssMI | GATC | 3 cut(s) | 682, 1086, 1174 |
| BssNI | GRCGYC | 1 cut(s) | 993 |
| BssT1I | CCWWGG | 2 cut(s) | 898, 1095 |
| Bst2UI | CCWGG | 5 cut(s) | 81, 633, 690, 997, 1036 |
| Bst4CI | ACNGT | 4 cut(s) | 187, 653, 764, 1024 |
| Bst6I | CTCTTC | 3 cut(s) | 532, 833, 899 |
| BstACI | GRCGYC | 1 cut(s) | 993 |
| BstBAI | YACGTR | 1 cut(s) | 921 |
| BstC8I | GCNNGC | 3 cut(s) | 665, 821, 965 |
| BstDEI | CTNAG | 1 cut(s) | 90 |
| BstDSI | CCRYGG | 2 cut(s) | 748, 1326 |
| BstF5I | GGATG | 3 cut(s) | 644, 870, 1444 |
| BstH2I | RGCGCY | 1 cut(s) | 996 |
| BstHHI | GCGC | 3 cut(s) | 825, 995, 1337 |
| BstKTI | GATC | 3 cut(s) | 685, 1089, 1177 |
| BstMAI | GTCTC | 3 cut(s) | 202, 474, 779 |
| BstMBI | GATC | 3 cut(s) | 682, 1086, 1174 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 65, 729, 1368 |
| BstNI | CCWGG | 5 cut(s) | 81, 633, 690, 997, 1036 |
| BstNSI | RCATGY | 3 cut(s) | 155, 614, 1279 |
| BstSCI | CCNGG | 6 cut(s) | 79, 631, 688, 995, 1034, 1254 |
| BstSFI | CTRYAG | 1 cut(s) | 369 |
| BstSLI | GKGCMC | 4 cut(s) | 161, 227, 907, 1107 |
| BstV1I | GCAGC | 2 cut(s) | 68, 71 |
| BstV2I | GAAGAC | 1 cut(s) | 1125 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1214 |
| BsuI | GTATCC | 1 cut(s) | 1036 |
| BsuRI | GGCC | 2 cut(s) | 566, 1240 |
| BtgI | CCRYGG | 2 cut(s) | 748, 1326 |
| BtgZI | GCGATG | 1 cut(s) | 741 |
| BtsCI | GGATG | 3 cut(s) | 644, 870, 1444 |
| BtsI | GCAGTG | 2 cut(s) | 702, 1369 |
| BtsIMutI | CAGTG | 4 cut(s) | 192, 702, 933, 1369 |
| Cac8I | GCNNGC | 3 cut(s) | 665, 821, 965 |
| CfoI | GCGC | 3 cut(s) | 825, 995, 1337 |
| Cfr10I | RCCGGY | 2 cut(s) | 418, 1279 |
| Cfr13I | GGNCC | 2 cut(s) | 856, 1239 |
| Csp6I | GTAC | 1 cut(s) | 583 |
| CviAII | CATG | 4 cut(s) | 152, 611, 835, 1276 |
| CviQI | GTAC | 1 cut(s) | 583 |
| DdeI | CTNAG | 1 cut(s) | 90 |
| DinI | GGCGCC | 1 cut(s) | 994 |
| DpnI | GATC | 3 cut(s) | 684, 1088, 1176 |
| DpnII | GATC | 3 cut(s) | 682, 1086, 1174 |
| Eam1104I | CTCTTC | 3 cut(s) | 532, 833, 899 |
| EarI | CTCTTC | 3 cut(s) | 532, 833, 899 |
| Eco130I | CCWWGG | 2 cut(s) | 898, 1095 |
| Eco24I | GRGCYC | 1 cut(s) | 969 |
| Eco47I | GGWCC | 1 cut(s) | 856 |
| Eco57I | CTGAAG | 1 cut(s) | 1134 |
| Eco72I | CACGTG | 1 cut(s) | 921 |
| EcoRII | CCWGG | 5 cut(s) | 79, 631, 688, 995, 1034 |
| EcoT14I | CCWWGG | 2 cut(s) | 898, 1095 |
| EcoT38I | GRGCYC | 1 cut(s) | 969 |
| EgeI | GGCGCC | 1 cut(s) | 994 |
| EheI | GGCGCC | 1 cut(s) | 994 |
| ErhI | CCWWGG | 2 cut(s) | 898, 1095 |
| Esp3I | CGTCTC | 1 cut(s) | 474 |
| FaeI | CATG | 4 cut(s) | 155, 614, 838, 1279 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 830, 862 |
| FaqI | GGGAC | 2 cut(s) | 857, 938 |
| FatI | CATG | 4 cut(s) | 151, 610, 834, 1275 |
| FbaI | TGATCA | 1 cut(s) | 682 |
| Fnu4HI | GCNGC | 3 cut(s) | 57, 60, 724 |
| FokI | GGATG | 3 cut(s) | 651, 857, 1451 |
| FriOI | GRGCYC | 1 cut(s) | 969 |
| Fsp4HI | GCNGC | 3 cut(s) | 57, 60, 724 |
| GlaI | GCGC | 3 cut(s) | 824, 994, 1336 |
| GluI | GCNGC | 3 cut(s) | 57, 60, 724 |
| GsuI | CTGGAG | 1 cut(s) | 63 |
| HaeII | RGCGCY | 1 cut(s) | 996 |
| HaeIII | GGCC | 2 cut(s) | 566, 1240 |
| HapII | CCGG | 3 cut(s) | 419, 1255, 1280 |
| HhaI | GCGC | 3 cut(s) | 825, 995, 1337 |
| Hin1I | GRCGYC | 1 cut(s) | 993 |
| Hin1II | CATG | 4 cut(s) | 155, 614, 838, 1279 |
| Hin6I | GCGC | 3 cut(s) | 823, 993, 1335 |
| HinP1I | GCGC | 3 cut(s) | 823, 993, 1335 |
| HincII | GTYRAC | 2 cut(s) | 649, 1261 |
| HindII | GTYRAC | 2 cut(s) | 649, 1261 |
| HindIII | AAGCTT | 1 cut(s) | 1414 |
| HinfI | GANTC | 5 cut(s) | 94, 929, 983, 1121, 1129 |
| HpaII | CCGG | 3 cut(s) | 419, 1255, 1280 |
| HphI | GGTGA | 9 cut(s) | 252, 393, 429, 447, 546, 727, 964, 1055, 1294 |
| Hpy166II | GTNNAC | 2 cut(s) | 649, 1261 |
| Hpy188I | TCNGA | 2 cut(s) | 784, 988 |
| Hpy188III | TCNNGA | 4 cut(s) | 704, 980, 1172, 1374 |
| Hpy8I | GTNNAC | 2 cut(s) | 649, 1261 |
| HpyAV | CCTTC | 9 cut(s) | 267, 408, 414, 462, 555, 556, 983, 986, 1067 |
| HpyCH4III | ACNGT | 4 cut(s) | 187, 653, 764, 1024 |
| HpyCH4IV | ACGT | 1 cut(s) | 920 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 65, 729, 1368 |
| HpyF3I | CTNAG | 1 cut(s) | 90 |
| HpySE526I | ACGT | 1 cut(s) | 920 |
| Hsp92I | GRCGYC | 1 cut(s) | 993 |
| Hsp92II | CATG | 4 cut(s) | 155, 614, 838, 1279 |
| HspAI | GCGC | 3 cut(s) | 823, 993, 1335 |
| KasI | GGCGCC | 1 cut(s) | 992 |
| Ksp22I | TGATCA | 1 cut(s) | 682 |
| Kzo9I | GATC | 3 cut(s) | 682, 1086, 1174 |
| LguI | GCTCTTC | 1 cut(s) | 899 |
| LmnI | GCTCC | 4 cut(s) | 379, 692, 1077, 1268 |
| Lsp1109I | GCAGC | 2 cut(s) | 68, 71 |
| LweI | GCATC | 2 cut(s) | 36, 741 |
| MaeII | ACGT | 1 cut(s) | 920 |
| MaeIII | GTNAC | 4 cut(s) | 137, 596, 655, 1043 |
| MalI | GATC | 3 cut(s) | 684, 1088, 1176 |
| MboI | GATC | 3 cut(s) | 682, 1086, 1174 |
| MboII | GAAGA | 7 cut(s) | 474, 519, 850, 886, 1127, 1130, 1183 |
| MhlI | GDGCHC | 5 cut(s) | 161, 227, 907, 969, 1107 |
| MluCI | AATT | 2 cut(s) | 33, 1387 |
| Mly113I | GGCGCC | 1 cut(s) | 993 |
| MlyI | GAGTC | 2 cut(s) | 923, 1115 |
| MmeI | TCCRAC | 5 cut(s) | 380, 401, 563, 807, 1043 |
| MseI | TTAA | 2 cut(s) | 1185, 1350 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1137, 1280 |
| MspI | CCGG | 3 cut(s) | 419, 1255, 1280 |
| MspR9I | CCNGG | 6 cut(s) | 81, 633, 690, 997, 1036, 1256 |
| MvaI | CCWGG | 5 cut(s) | 81, 633, 690, 997, 1036 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 65, 729, 1368 |
| NarI | GGCGCC | 1 cut(s) | 993 |
| NciI | CCSGG | 1 cut(s) | 1256 |
| NdeII | GATC | 3 cut(s) | 682, 1086, 1174 |
| NlaIII | CATG | 4 cut(s) | 155, 614, 838, 1279 |
| NlaIV | GGNNCC | 5 cut(s) | 423, 857, 904, 994, 1270 |
| NmuCI | GTSAC | 2 cut(s) | 655, 1043 |
| NspI | RCATGY | 3 cut(s) | 155, 614, 1279 |
| PciI | ACATGT | 1 cut(s) | 610 |
| PciSI | GCTCTTC | 1 cut(s) | 899 |
| PfeI | GAWTC | 3 cut(s) | 94, 983, 1129 |
| PflFI | GACNNNGTC | 1 cut(s) | 653 |
| PkrI | GCNGC | 3 cut(s) | 58, 61, 725 |
| PleI | GAGTC | 2 cut(s) | 923, 1115 |
| PluTI | GGCGCC | 1 cut(s) | 996 |
| PmaCI | CACGTG | 1 cut(s) | 921 |
| PmlI | CACGTG | 1 cut(s) | 921 |
| PpsI | GAGTC | 2 cut(s) | 923, 1115 |
| Ppu21I | YACGTR | 1 cut(s) | 921 |
| PscI | ACATGT | 1 cut(s) | 610 |
| Psp6I | CCWGG | 5 cut(s) | 79, 631, 688, 995, 1034 |
| PspCI | CACGTG | 1 cut(s) | 921 |
| PspGI | CCWGG | 5 cut(s) | 79, 631, 688, 995, 1034 |
| PspN4I | GGNNCC | 5 cut(s) | 423, 857, 904, 994, 1270 |
| PspPI | GGNCC | 2 cut(s) | 856, 1239 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 569, 601 |
| PsyI | GACNNNGTC | 1 cut(s) | 653 |
| RsaI | GTAC | 1 cut(s) | 584 |
| RsaNI | GTAC | 1 cut(s) | 583 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1137, 1280 |
| SapI | GCTCTTC | 1 cut(s) | 899 |
| SaqAI | TTAA | 2 cut(s) | 1185, 1350 |
| SatI | GCNGC | 3 cut(s) | 57, 60, 724 |
| Sau3AI | GATC | 3 cut(s) | 682, 1086, 1174 |
| Sau96I | GGNCC | 2 cut(s) | 856, 1239 |
| ScaI | AGTACT | 1 cut(s) | 584 |
| SchI | GAGTC | 2 cut(s) | 923, 1115 |
| ScrFI | CCNGG | 6 cut(s) | 81, 633, 690, 997, 1036, 1256 |
| SduI | GDGCHC | 5 cut(s) | 161, 227, 907, 969, 1107 |
| SfaNI | GCATC | 2 cut(s) | 36, 741 |
| SfcI | CTRYAG | 1 cut(s) | 369 |
| SfoI | GGCGCC | 1 cut(s) | 994 |
| SinI | GGWCC | 1 cut(s) | 856 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1137, 1280 |
| SmlI | CTYRAG | 3 cut(s) | 297, 1123, 1417 |
| SmoI | CTYRAG | 3 cut(s) | 297, 1123, 1417 |
| Sse9I | AATT | 2 cut(s) | 33, 1387 |
| SsiI | CCGC | 3 cut(s) | 723, 915, 940 |
| SspDI | GGCGCC | 1 cut(s) | 992 |
| StyD4I | CCNGG | 6 cut(s) | 79, 631, 688, 995, 1034, 1254 |
| StyI | CCWWGG | 2 cut(s) | 898, 1095 |
| TaaI | ACNGT | 4 cut(s) | 187, 653, 764, 1024 |
| TaiI | ACGT | 1 cut(s) | 923 |
| TasI | AATT | 2 cut(s) | 33, 1387 |
| TatI | WGTACW | 1 cut(s) | 582 |
| TauI | GCSGC | 1 cut(s) | 726 |
| TfiI | GAWTC | 3 cut(s) | 94, 983, 1129 |
| Tru1I | TTAA | 2 cut(s) | 1185, 1350 |
| Tru9I | TTAA | 2 cut(s) | 1185, 1350 |
| TscAI | CASTG | 4 cut(s) | 192, 702, 940, 1369 |
| TseFI | GTSAC | 2 cut(s) | 655, 1043 |
| TseI | GCWGC | 2 cut(s) | 56, 59 |
| Tsp45I | GTSAC | 2 cut(s) | 655, 1043 |
| TspDTI | ATGAA | 3 cut(s) | 706, 802, 851 |
| TspGWI | ACGGA | 1 cut(s) | 1343 |
| TspRI | CASTG | 4 cut(s) | 192, 702, 940, 1369 |
| Tth111I | GACNNNGTC | 1 cut(s) | 653 |
| VpaK11BI | GGWCC | 1 cut(s) | 856 |
| XceI | RCATGY | 3 cut(s) | 155, 614, 1279 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 896, 1057 |
| ZrmI | AGTACT | 1 cut(s) | 584 |