Prupe.8G138100_v2.0.a1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0014644
Physical Location & Seq
Forward (+)
15760856 .. 15763357
2502 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G138100.1

Sequence Viewer

Length: 1887 bp
ATGTTAGGAAAACAATTTTCATTTCGTCAAAAGCTTCAAAGTTGCTTCTGCTGCTCATCTCAGTCTGCTCTTCACCTTCATACACTCCCAGCCAATCTCAATATCTCCACCGACTTAGCTGCTTCCCTACAGGGTCGTATTTCATACCCTCGTCTCCTTCAAATCCATGCTCAAGTCTTTCAAGTTGGTGCTCAGCAGGACAACCTGATCGCCACTCGTCTCATTGGCCATTACCCATCTCATCTCGCTCTCCGAGTCTTTCATCAGCTCCAAAAACCCAACATTTTTCCTTTCAATGCCATTATCAGGGTCTTTGCAGAGGAGGGTCTCTTCTCCGATGCGTTTTCCCTCTTCAAAAGCTTAAAGCAGACGTCCCTTTCCCCTAATGACTTCACCTTCTCTTTCCTTCTCAAGGCCTGCTTTCGCTCTCAAAATTCTCGTTATGTCAAACAAATTCATACCCATGTTATGAAAATGGGGTTTCTTTGCAACTCATTTGTCTGTGCCAGCCTACTTGCAGTGTATGCTAAGGGACTTAAGGATTTGGGTTCTGCACGCTTGGTGTTTGATGAAATGCCTGAGAAGAGTATCGTTTGCTGTTGGACATCGTTAATTGCTGGTTATGCTCTGTCAGGTCAGAGTGAGCAAGTTTTGCGGCTTTTCTTAATGATGGTTGATGAGAATTTGCGGCCAGAAGATGATACAATGGTTAGTGTTTTGTCTGCGTGTTCAAATCTTGACATAGTTGATATTGAGAAATGGGTTACAATTCTATCCAAAGTCGTCAGTAACGTTGACGCTAAGAAGTTTGGTTGTGACTCTGTCAACACTGCACTTGTTTATTTGTATGGGAAGTGGGGAAAGGTTGAGAAGAGTCGGGATCGATTTGATCAAATTTCTGATAATGGAAAGCAAAGTGTGCTTCCTTGGAATGCAATGATAGGTGCATTTGTTCAGAATGGTTTTCCTATGGAGTCTCTGAGTCTTTTCCGCGTAATGGTGGAAGATCCCAAGTATAGGCCTAACCATGTTACAATGGTCAGCGTGCTTTCAGCTTGTGCTCAAATTGGTGATTTAGACCTCGGCAGGTGGGTTCATGAGTACTTGAAATCTAAAGGAAGCAAAGGTGTGATAGGATCAAACAGAATTCTAGCCACTGCATTGATCGACATGTATTCAAAATGTGGGAGTTTGGAGAGAGCAAAAGAGGTTTTCGATCAGATGGTCTCCAAAGATATTGTTTCATTCAATGCCATGATCATGGGTCTTGCAGTTAACAGTGAAGGAGAGGAGGCCTTGAGGCTATTCTCTAGAATCCAAGAGTTTGGTTTACAACCCAATGCGGGTACGTTCCTTGGCGCTTTATGTGCATGCAGCCACTCTGGTTTATCCGAGGAAGGACGTCAAATATTTAACGACATGACCTCAAGCTTTTCTGTTTCTTCGAAATTAGAACATTATGCTTGCTACGTTGATCTGCTTGCAAGAGTAGGCCTAGTTGAAGAAGCTCTGGAGGTTGTAACATCCATGCCCTTTGAGCCTAATAGTTTTGTGTGGGGTGCTCTGCTTGGGGGCTGCCTGCTCCACTCAAGAGTAGACTTGGCTCAATATGTTTCCAACAAACTGGTTCGATCGGACCCTGACAATTCAGGAGGCTACATAATGCTGGCTAATGCATTTGCATCTGATCGTCGATGGGGTGATGTCTCTGCGCTGAGGTGGGTTATGAGGGAGAAGGGGGTCAACAAGCAGCCTGGCTGCAGCTGGATCAGCATCGACGGCGTGGTGCATGAATTTCTTGTGGGGTGCCCGTCACACCCTCAAATTGAGAGCATATATAATACGCTAGTTGGATTGGTGAAGGAAATGAAGATAGGAAGTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

629

Amino Acids

69.7

Weight (kDa)

7.51

Isoelectric Point (pI)

44.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014644)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25550
malus_domestica MD05G1093400.v1.1 MD10G1100300.v1.1
prunus_persica Prupe.8G138100_v2.0.a1
pyrus_communis pycom05g09250 pycom10g08630
rosa_chinensis RchiOBHm_Chr2g0123701
rosa_laevigata RLG00000018770
rosa_multiflora Rmu_sc0004915.1_g000001 Rmu_sc0006911.1_g000001
rosa_roxburghii Rroxscaffold_2G00120410
rosa_rugosa Rorug02G0247400
rosa_samantha Rh2AG306400 Rh2BG314800 Rh2CG292800 Rh2DG330100
rosa_wichuraiana Rw2G024580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1077
AatII GACGTC 2 cut(s) 374, 1405
Acc36I ACCTGC 1 cut(s) 1077
AccB1I GGYRCC 1 cut(s) 1806
AccI GTMKAC 1 cut(s) 1596
AccII CGCG 1 cut(s) 993
AciI CCGC 4 cut(s) 655, 688, 991, 1343
AclI AACGTT 1 cut(s) 792
AclWI GGATC 4 cut(s) 888, 1001, 1144, 1775
AcoI YGGCCR 2 cut(s) 226, 689
AcsI RAATTY 6 cut(s) 433, 453, 682, 894, 1146, 1793
AcyI GRCGYC 2 cut(s) 371, 1402
AfaI GTAC 2 cut(s) 1103, 1348
AfiI CCNNNNNNNGG 5 cut(s) 306, 412, 997, 1017, 1343
AflII CTTAAG 1 cut(s) 536
AflIII ACRYGT 1 cut(s) 1170
AjnI CCWGG 1 cut(s) 1753
AluBI AGCT 8 cut(s) 34, 119, 268, 360, 1055, 1431, 1508, 1764
AluI AGCT 8 cut(s) 34, 119, 268, 360, 1055, 1431, 1508, 1764
Alw21I GWGCWC 3 cut(s) 193, 1063, 1564
Alw26I GTCTC 6 cut(s) 158, 224, 332, 981, 1231, 1711
AlwI GGATC 4 cut(s) 888, 1001, 1144, 1775
AoxI GGCC 6 cut(s) 226, 414, 689, 1019, 1293, 1492
ApeKI GCWGC 7 cut(s) 51, 119, 1374, 1575, 1750, 1758, 1761
ApoI RAATTY 6 cut(s) 433, 453, 682, 894, 1146, 1793
AspLEI GCGC 2 cut(s) 1361, 1714
AspS9I GGNCC 1 cut(s) 1636
AsuHPI GGTGA 5 cut(s) 65, 385, 1082, 1712, 1870
AsuII TTCGAA 1 cut(s) 1445
AvaII GGWCC 1 cut(s) 1636
BaeGI GKGCMC 1 cut(s) 1811
BaeI ACNNNNGTAYC 2 cut(s) 693, 726
BalI TGGCCA 1 cut(s) 228
BanI GGYRCC 1 cut(s) 1806
Bbv12I GWGCWC 3 cut(s) 193, 1063, 1564
BbvCI CCTCAGC 1 cut(s) 1715
BbvI GCAGC 7 cut(s) 38, 106, 1386, 1562, 1745, 1762, 1773
BccI CCATC 4 cut(s) 244, 664, 1216, 1689
BceAI ACGGC 1 cut(s) 1795
BcgI CGANNNNNNTGC 2 cut(s) 101, 135
BciT130I CCWGG 1 cut(s) 1755
BclI TGATCA 2 cut(s) 889, 1257
BcoDI GTCTC 6 cut(s) 158, 224, 332, 981, 1231, 1711
BfaI CTAG 4 cut(s) 1151, 1311, 1496, 1847
BfmI CTRYAG 2 cut(s) 128, 1759
BfoI RGCGCY 1 cut(s) 1362
BfrI CTTAAG 1 cut(s) 536
BfuAI ACCTGC 1 cut(s) 1077
BisI GCNGC 9 cut(s) 52, 120, 656, 689, 1375, 1576, 1751, 1759, 1762
BlpI GCTNAGC 1 cut(s) 192
BlsI GCNGC 9 cut(s) 53, 121, 657, 690, 1376, 1577, 1752, 1760, 1763
BmcAI AGTACT 1 cut(s) 1103
Bme1390I CCNGG 1 cut(s) 1755
Bme18I GGWCC 1 cut(s) 1636
BmgT120I GGNCC 1 cut(s) 1636
BmiI GGNNCC 2 cut(s) 1638, 1808
BmrFI CCNGG 1 cut(s) 1755
BmsI GCATC 3 cut(s) 328, 1691, 1782
BpmI CTGGAG 1 cut(s) 1532
Bpu10I CCTNAGC 2 cut(s) 528, 1715
Bpu1102I GCTNAGC 1 cut(s) 192
Bpu14I TTCGAA 1 cut(s) 1445
BpuEI CTTGAG 5 cut(s) 156, 395, 1318, 1411, 1573
Bsa29I ATCGAT 1 cut(s) 883
BsaBI GATNNNNATC 1 cut(s) 1772
BsaHI GRCGYC 2 cut(s) 371, 1402
BsaI GGTCTC 2 cut(s) 332, 1231
BsaJI CCNNGG 4 cut(s) 926, 1081, 1354, 1392
Bsc4I CCNNNNNNNGG 5 cut(s) 306, 412, 997, 1017, 1343
Bse1I ACTGG 1 cut(s) 1629
Bse3DI GCAATG 1 cut(s) 942
Bse8I GATNNNNATC 1 cut(s) 1772
BseBI CCWGG 1 cut(s) 1755
BseCI ATCGAT 1 cut(s) 883
BseDI CCNNGG 4 cut(s) 926, 1081, 1354, 1392
BseGI GGATG 1 cut(s) 1523
BseJI GATNNNNATC 1 cut(s) 1772
BseLI CCNNNNNNNGG 5 cut(s) 306, 412, 997, 1017, 1343
BseMI GCAATG 1 cut(s) 942
BseMII CTCAG 5 cut(s) 74, 206, 570, 971, 1706
BseNI ACTGG 1 cut(s) 1629
BseRI GAGGAG 2 cut(s) 335, 1304
BseSI GKGCMC 1 cut(s) 1811
BseXI GCAGC 7 cut(s) 38, 106, 1386, 1562, 1745, 1762, 1773
BseYI CCCAGC 1 cut(s) 88
BsgI GTGCAG 2 cut(s) 537, 816
Bsh1236I CGCG 1 cut(s) 993
Bsh1285I CGRYCG 1 cut(s) 1634
BshFI GGCC 6 cut(s) 228, 416, 691, 1021, 1295, 1494
BshNI GGYRCC 1 cut(s) 1806
BshVI ATCGAT 1 cut(s) 883
BsiEI CGRYCG 1 cut(s) 1634
BsiHKAI GWGCWC 3 cut(s) 193, 1063, 1564
BslFI GGGAC 2 cut(s) 358, 546
BslI CCNNNNNNNGG 5 cut(s) 306, 412, 997, 1017, 1343
BsmAI GTCTC 6 cut(s) 158, 224, 332, 981, 1231, 1711
BsmBI CGTCTC 2 cut(s) 158, 224
BsmFI GGGAC 2 cut(s) 358, 546
BsmI GAATGC 1 cut(s) 937
BsnI GGCC 6 cut(s) 228, 416, 691, 1021, 1295, 1494
Bso31I GGTCTC 2 cut(s) 332, 1231
Bsp119I TTCGAA 1 cut(s) 1445
Bsp1286I GDGCHC 4 cut(s) 193, 1063, 1564, 1811
Bsp1720I GCTNAGC 1 cut(s) 192
BspACI CCGC 4 cut(s) 655, 688, 991, 1343
BspANI GGCC 6 cut(s) 228, 416, 691, 1021, 1295, 1494
BspCNI CTCAG 5 cut(s) 73, 205, 571, 972, 1707
BspDI ATCGAT 1 cut(s) 883
BspFNI CGCG 1 cut(s) 993
BspHI TCATGA 1 cut(s) 1096
BspLI GGNNCC 2 cut(s) 1638, 1808
BspMAI CTGCAG 1 cut(s) 1763
BspMI ACCTGC 1 cut(s) 1077
BspPI GGATC 4 cut(s) 888, 1001, 1144, 1775
BspQI GCTCTTC 1 cut(s) 75
BspT104I TTCGAA 1 cut(s) 1445
BspT107I GGYRCC 1 cut(s) 1806
BspTI CTTAAG 1 cut(s) 536
BspTNI GGTCTC 2 cut(s) 332, 1231
BsrDI GCAATG 1 cut(s) 942
BsrI ACTGG 1 cut(s) 1629
BssECI CCNNGG 4 cut(s) 926, 1081, 1354, 1392
BssNI GRCGYC 2 cut(s) 371, 1402
BssT1I CCWWGG 2 cut(s) 926, 1354
Bst2UI CCWGG 1 cut(s) 1755
Bst4CI ACNGT 1 cut(s) 1280
Bst6I CTCTTC 5 cut(s) 75, 335, 356, 578, 866
BstACI GRCGYC 2 cut(s) 371, 1402
BstAFI CTTAAG 1 cut(s) 536
BstAPI GCANNNNNTGC 3 cut(s) 524, 652, 919
BstBI TTCGAA 1 cut(s) 1445
BstC8I GCNNGC 9 cut(s) 418, 508, 556, 1046, 1372, 1465, 1482, 1580, 1668
BstDEI CTNAG 8 cut(s) 60, 115, 192, 528, 579, 801, 980, 1715
BstENI CCTNNNNNAGG 1 cut(s) 410
BstF5I GGATG 1 cut(s) 1523
BstFNI CGCG 1 cut(s) 993
BstH2I RGCGCY 1 cut(s) 1362
BstHHI GCGC 2 cut(s) 1361, 1714
BstMAI GTCTC 6 cut(s) 158, 224, 332, 981, 1231, 1711
BstMCI CGRYCG 1 cut(s) 1634
BstMWI GCNNNNNNNGC 9 cut(s) 51, 524, 623, 652, 919, 1367, 1537, 1770, 1779
BstNI CCWGG 1 cut(s) 1755
BstNSI RCATGY 2 cut(s) 1174, 1374
BstSCI CCNGG 1 cut(s) 1753
BstSFI CTRYAG 2 cut(s) 128, 1759
BstSLI GKGCMC 1 cut(s) 1811
BstUI CGCG 1 cut(s) 993
BstV1I GCAGC 7 cut(s) 38, 106, 1386, 1562, 1745, 1762, 1773
BstX2I RGATCY 1 cut(s) 1006
BstXI CCANNNNNNTGG 3 cut(s) 1261, 1325, 1624
BstYI RGATCY 1 cut(s) 1006
Bsu15I ATCGAT 1 cut(s) 883
BsuRI GGCC 6 cut(s) 228, 416, 691, 1021, 1295, 1494
BsuTUI ATCGAT 1 cut(s) 883
BtsCI GGATG 1 cut(s) 1523
BtsI GCAGTG 3 cut(s) 525, 828, 1155
BtsIMutI CAGTG 4 cut(s) 525, 828, 1155, 1285
BveI ACCTGC 1 cut(s) 1077
Cac8I GCNNGC 9 cut(s) 418, 508, 556, 1046, 1372, 1465, 1482, 1580, 1668
CciI TCATGA 1 cut(s) 1096
CfoI GCGC 2 cut(s) 1361, 1714
Cfr13I GGNCC 1 cut(s) 1636
ClaI ATCGAT 1 cut(s) 883
CseI GACGC 1 cut(s) 806
Csp6I GTAC 2 cut(s) 1102, 1347
CviQI GTAC 2 cut(s) 1102, 1347
DdeI CTNAG 8 cut(s) 60, 115, 192, 528, 579, 801, 980, 1715
EaeI YGGCCR 2 cut(s) 226, 689
Eam1104I CTCTTC 5 cut(s) 75, 335, 356, 578, 866
EarI CTCTTC 5 cut(s) 75, 335, 356, 578, 866
Eco130I CCWWGG 2 cut(s) 926, 1354
Eco147I AGGCCT 4 cut(s) 416, 1021, 1295, 1494
Eco31I GGTCTC 2 cut(s) 332, 1231
Eco47I GGWCC 1 cut(s) 1636
EcoNI CCTNNNNNAGG 1 cut(s) 410
EcoRI GAATTC 1 cut(s) 1146
EcoRII CCWGG 1 cut(s) 1753
EcoT14I CCWWGG 2 cut(s) 926, 1354
EcoT22I ATGCAT 1 cut(s) 1678
ErhI CCWWGG 2 cut(s) 926, 1354
Esp3I CGTCTC 2 cut(s) 158, 224
FalI AAGNNNNNCTT 2 cut(s) 404, 436
FaqI GGGAC 2 cut(s) 358, 546
FauI CCCGC 1 cut(s) 1336
FbaI TGATCA 2 cut(s) 889, 1257
FblI GTMKAC 1 cut(s) 1596
Fnu4HI GCNGC 9 cut(s) 52, 120, 656, 689, 1375, 1576, 1751, 1759, 1762
FokI GGATG 1 cut(s) 1510
Fsp4HI GCNGC 9 cut(s) 52, 120, 656, 689, 1375, 1576, 1751, 1759, 1762
FspBI CTAG 4 cut(s) 1151, 1311, 1496, 1847
GlaI GCGC 2 cut(s) 1360, 1713
GluI GCNGC 9 cut(s) 52, 120, 656, 689, 1375, 1576, 1751, 1759, 1762
GsaI CCCAGC 1 cut(s) 92
GsuI CTGGAG 1 cut(s) 1532
HaeII RGCGCY 1 cut(s) 1362
HaeIII GGCC 6 cut(s) 228, 416, 691, 1021, 1295, 1494
HgaI GACGC 1 cut(s) 806
HhaI GCGC 2 cut(s) 1361, 1714
Hin1I GRCGYC 2 cut(s) 371, 1402
Hin6I GCGC 2 cut(s) 1359, 1712
HinP1I GCGC 2 cut(s) 1359, 1712
HincII GTYRAC 4 cut(s) 796, 826, 1276, 1744
HindII GTYRAC 4 cut(s) 796, 826, 1276, 1744
HindIII AAGCTT 3 cut(s) 32, 358, 1429
HinfI GANTC 6 cut(s) 255, 818, 874, 974, 982, 1314
HpaI GTTAAC 1 cut(s) 1276
HphI GGTGA 5 cut(s) 65, 385, 1082, 1712, 1870
Hpy166II GTNNAC 6 cut(s) 796, 826, 1276, 1331, 1597, 1744
Hpy188III TCNNGA 7 cut(s) 737, 878, 1097, 1311, 1511, 1590, 1650
Hpy8I GTNNAC 6 cut(s) 796, 826, 1276, 1331, 1597, 1744
Hpy99I CGWCG 2 cut(s) 1695, 1781
HpyAV CCTTC 8 cut(s) 86, 167, 406, 416, 1277, 1391, 1729, 1855
HpyCH4III ACNGT 1 cut(s) 1280
HpyCH4IV ACGT 5 cut(s) 371, 792, 1349, 1402, 1470
HpyF10VI GCNNNNNNNGC 9 cut(s) 51, 524, 623, 652, 919, 1367, 1537, 1770, 1779
HpyF3I CTNAG 8 cut(s) 60, 115, 192, 528, 579, 801, 980, 1715
HpySE526I ACGT 5 cut(s) 371, 792, 1349, 1402, 1470
Hsp92I GRCGYC 2 cut(s) 371, 1402
HspAI GCGC 2 cut(s) 1359, 1712
Ksp22I TGATCA 2 cut(s) 889, 1257
KspAI GTTAAC 1 cut(s) 1276
LguI GCTCTTC 1 cut(s) 75
LmnI GCTCC 2 cut(s) 273, 1587
Lsp1109I GCAGC 7 cut(s) 38, 106, 1386, 1562, 1745, 1762, 1773
LweI GCATC 3 cut(s) 328, 1691, 1782
MaeI CTAG 4 cut(s) 1151, 1311, 1496, 1847
MaeII ACGT 5 cut(s) 371, 792, 1349, 1402, 1470
MaeIII GTNAC 6 cut(s) 763, 788, 815, 1030, 1519, 1812
MflI RGATCY 1 cut(s) 1006
MhlI GDGCHC 4 cut(s) 193, 1063, 1564, 1811
MlsI TGGCCA 1 cut(s) 228
MluNI TGGCCA 1 cut(s) 228
MlyI GAGTC 5 cut(s) 264, 812, 883, 983, 991
MmeI TCCRAC 3 cut(s) 581, 1641, 1831
Mox20I TGGCCA 1 cut(s) 228
Mph1103I ATGCAT 1 cut(s) 1678
MscI TGGCCA 1 cut(s) 228
MseI TTAA 6 cut(s) 362, 537, 611, 665, 1275, 1413
MslI CAYNNNNRTG 2 cut(s) 462, 1259
Msp20I TGGCCA 1 cut(s) 228
MspA1I CMGCKG 1 cut(s) 1764
MspCI CTTAAG 1 cut(s) 536
MspR9I CCNGG 1 cut(s) 1755
Mva1269I GAATGC 1 cut(s) 937
MvaI CCWGG 1 cut(s) 1755
MvnI CGCG 1 cut(s) 993
MwoI GCNNNNNNNGC 9 cut(s) 51, 524, 623, 652, 919, 1367, 1537, 1770, 1779
NlaIV GGNNCC 2 cut(s) 1638, 1808
NmeAIII GCCGAG 1 cut(s) 1062
NmuCI GTSAC 2 cut(s) 815, 1812
NsiI ATGCAT 1 cut(s) 1678
NspI RCATGY 2 cut(s) 1174, 1374
NspV TTCGAA 1 cut(s) 1445
PaeI GCATGC 1 cut(s) 1374
PagI TCATGA 1 cut(s) 1096
PaqCI CACCTGC 1 cut(s) 1077
PceI AGGCCT 4 cut(s) 416, 1021, 1295, 1494
PciI ACATGT 1 cut(s) 1170
PciSI GCTCTTC 1 cut(s) 75
PcsI WCGNNNNNNNCGW 1 cut(s) 789
PctI GAATGC 1 cut(s) 937
PfeI GAWTC 1 cut(s) 1314
PflFI GACNNNGTC 1 cut(s) 821
PkrI GCNGC 9 cut(s) 53, 121, 657, 690, 1376, 1577, 1752, 1760, 1763
Ple19I CGATCG 1 cut(s) 1634
PleI GAGTC 5 cut(s) 263, 812, 882, 982, 990
PpsI GAGTC 5 cut(s) 263, 812, 882, 982, 990
PscI ACATGT 1 cut(s) 1170
Psp1406I AACGTT 1 cut(s) 792
Psp6I CCWGG 1 cut(s) 1753
PspFI CCCAGC 1 cut(s) 88
PspGI CCWGG 1 cut(s) 1753
PspN4I GGNNCC 2 cut(s) 1638, 1808
PspPI GGNCC 1 cut(s) 1636
PstI CTGCAG 1 cut(s) 1763
PsuI RGATCY 1 cut(s) 1006
PsyI GACNNNGTC 1 cut(s) 821
PvuI CGATCG 1 cut(s) 1634
PvuII CAGCTG 1 cut(s) 1764
RsaI GTAC 2 cut(s) 1103, 1348
RsaNI GTAC 2 cut(s) 1102, 1347
RseI CAYNNNNRTG 2 cut(s) 462, 1259
SapI GCTCTTC 1 cut(s) 75
SaqAI TTAA 6 cut(s) 362, 537, 611, 665, 1275, 1413
SatI GCNGC 9 cut(s) 52, 120, 656, 689, 1375, 1576, 1751, 1759, 1762
Sau96I GGNCC 1 cut(s) 1636
ScaI AGTACT 1 cut(s) 1103
SchI GAGTC 5 cut(s) 264, 812, 883, 983, 991
ScrFI CCNGG 1 cut(s) 1755
SduI GDGCHC 4 cut(s) 193, 1063, 1564, 1811
SfaNI GCATC 3 cut(s) 328, 1691, 1782
SfcI CTRYAG 2 cut(s) 128, 1759
SfuI TTCGAA 1 cut(s) 1445
SinI GGWCC 1 cut(s) 1636
SmiMI CAYNNNNRTG 2 cut(s) 462, 1259
SmlI CTYRAG 6 cut(s) 171, 410, 536, 1297, 1426, 1588
SmoI CTYRAG 6 cut(s) 171, 410, 536, 1297, 1426, 1588
SphI GCATGC 1 cut(s) 1374
SseBI AGGCCT 4 cut(s) 416, 1021, 1295, 1494
SsiI CCGC 4 cut(s) 655, 688, 991, 1343
SspI AATATT 1 cut(s) 1410
SspMI CTAG 4 cut(s) 1151, 1311, 1496, 1847
StuI AGGCCT 4 cut(s) 416, 1021, 1295, 1494
StyD4I CCNGG 1 cut(s) 1753
StyI CCWWGG 2 cut(s) 926, 1354
TaaI ACNGT 1 cut(s) 1280
TaiI ACGT 5 cut(s) 374, 795, 1352, 1405, 1473
TaqI TCGA 7 cut(s) 883, 1167, 1215, 1445, 1630, 1693, 1776
TatI WGTACW 1 cut(s) 1101
TauI GCSGC 2 cut(s) 658, 691
TfiI GAWTC 1 cut(s) 1314
Tru1I TTAA 6 cut(s) 362, 537, 611, 665, 1275, 1413
Tru9I TTAA 6 cut(s) 362, 537, 611, 665, 1275, 1413
TscAI CASTG 4 cut(s) 525, 835, 1162, 1285
TseFI GTSAC 2 cut(s) 815, 1812
TseI GCWGC 7 cut(s) 51, 119, 1374, 1575, 1750, 1758, 1761
Tsp45I GTSAC 2 cut(s) 815, 1812
TspRI CASTG 4 cut(s) 525, 835, 1162, 1285
Tth111I GACNNNGTC 1 cut(s) 821
Vha464I CTTAAG 1 cut(s) 536
VpaK11BI GGWCC 1 cut(s) 1636
XagI CCTNNNNNAGG 1 cut(s) 410
XapI RAATTY 6 cut(s) 433, 453, 682, 894, 1146, 1793
XbaI TCTAGA 1 cut(s) 1310
XceI RCATGY 2 cut(s) 1174, 1374
XmiI GTMKAC 1 cut(s) 1596
XspI CTAG 4 cut(s) 1151, 1311, 1496, 1847
ZraI GACGTC 2 cut(s) 372, 1403
ZrmI AGTACT 1 cut(s) 1103
Zsp2I ATGCAT 1 cut(s) 1678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.