Rh2DG330100

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0014644
Physical Location & Seq
Forward (+)
41887810 .. 41889642
1833 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG330100.1

Sequence Viewer

Length: 1833 bp
ATGAACTTGTTTCTCTCATCTCAAAAGCTCAAGTCATCTCACTCTGCCGACTTAGCTGCTCTGCTACAAGGTCGTATCTCACACTCTCATCTCCTTCAAATCCATGCCCAAATCTTTGTTCTTGGTGCTCACCACAACGACTTGATAGCCACTCGTCTCATTGGCCACTACCCATCTCACATTGCTCTCCGTGTCTTTCATGTCCTCCGAAAACCCAATGTGTTCCCTTTCAACGCCATCATCAGGGTCTTCGCCGAACAGGGTCTCTTCTGCAATGCCTTCTCCCTCTTCAAAACCCTGAAACAGAGCTCCCCTTCGCCCAATGACTTCACCTTCTCTTTCCTCCTCAAGTCGTGTAGCTTTCGTTGCGGGGATTCTGTTTATGTCAAGCAAATTCACACCCATGTTGTGAAGATGGGCTTTCTTCGCAACGAGTTCGTCTGTAATGGCCTGCTTGCTGTTTACGCTAAGGGACTCAAGGATCTGGGTTCTGCACGCCAGGTGTTTGATGAAATGCCTGACAAGGGTGTGGTTTGCTGTTGGACGTCTTTAATTGCGGGTTATGCTCAGTCAGGGAAGGCTGAGGAAGCTTTGCGGTTATTTGTGTTGATGGTTAAGGGAGATTTGCGGCCGGAGGATGATACAATGGTCAGTGTTTTATCAGCTTGTTCGAATCTTGACATGTCAAAGATTGAGAAATGGGTTTTGATTCTGTCCCGAGTTTTCGACAATGTGGATTCTAAGAATGTTGGTTCGGACTCCGTTAACACTGTACTGGTATATCTGTATGGGAAATGGGGGAAAATAGAGAAGAGCAGGGAAGCATTTGATGGAATTTCTGACAGTGGGAAGCAAAGTGTGCTGCCTTGGAATGCTATTATCGGTGCATACGTTCAGAATGGTTTTCCTGTGGAGTCTGTAAGTGTTTTCCGCGTAATGGTGGGAGATCCCACTCGTAAACCTAACCATGTTACTATGGTCAGTGTGCTTTCTGCCTGTGCTCAAGTTGGTGATTTAGAGCTTGGTAGGTGGGTTCATGAATACTTGAAATCTAAAGGAAATAGAGGTGTGATTGGATCAAACAGAATTCTAGCCACTGCATTGATTGACATGTATTCCAAATGTGGGAGTTTGGAGAAGGCAAAAGAGGTTTTTCATCAGATGGTGTCGAAAGACATTGTTTCATTCAATGCTATGATCATGGGTCTTGCAGTTAATAGTGAAGGAGAGGAAGCCCTCAGGCTATTCTCAAAAATCCAAGATTTTGGTTTACAACCCAATGCTGGTACCTTCCTTGGTGCTTTATGTGCATGCAACCACTCAGGTTTTTCAGAGGAAGGGCGTCAAATATTCAAGGATATGACCTCAGGCTTTTCCATTTCACCTAAATTAGAACATTATGCCTGCTATATTGATCTCCTTGCCCGAGTAGGCCTAGTTGAAGAAGCTCTCGAGGTTGTAACTTCCATGCCTTTTGAGCCTAACAGTATTGTGTGGGGTGCTCTGCTTGGAGGTTGCCTGCTCTACTCTAGATTAGACTATGCTGAATATGTTTCCCGTAAACTTGTTCAATCTGACCCCAACAATACCGGGGGTTATGTCATGCTGGCTAATGCATTTGCGTCTGATCGTCGATGGGGTGATGTCTCTTCTCTGAGGCGGTTTATGAGGGAAAAGGGAGTGACCAAGCAGCCTGGCTGTAGTTGGATCAGCATTAATGGTGTTGTGCATGAATTTCTTGTTGGATGCTCATCACATTCTCAAAGTGAAAGTATAAGTAGCATACTAAATGGATTGGTGAAACAAATGAAGATAGCAATTGACATACTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

610

Amino Acids

67.31

Weight (kDa)

8.49

Isoelectric Point (pI)

44.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 72 - 119 5e-08 PPR repeat family
PPR_2 PF13041 178 - 224 3.7e-07 PPR repeat family
PPR PF01535 180 - 206 2.1e-06 PPR repeat
PPR_2 PF13041 391 - 433 6.5e-07 PPR repeat family
E_motif PF20431 509 - 570 5.6e-16 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014644)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25550
malus_domestica MD05G1093400.v1.1 MD10G1100300.v1.1
prunus_persica Prupe.8G138100_v2.0.a1
pyrus_communis pycom05g09250 pycom10g08630
rosa_chinensis RchiOBHm_Chr2g0123701
rosa_laevigata RLG00000018770
rosa_multiflora Rmu_sc0004915.1_g000001 Rmu_sc0006911.1_g000001
rosa_roxburghii Rroxscaffold_2G00120410
rosa_rugosa Rorug02G0247400
rosa_samantha Rh2AG306400 Rh2BG314800 Rh2CG292800 Rh2DG330100
rosa_wichuraiana Rw2G024580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 548
Acc65I GGTACC 1 cut(s) 1286
AccB1I GGYRCC 1 cut(s) 1286
AccII CGCG 1 cut(s) 933
AciI CCGC 6 cut(s) 369, 557, 595, 628, 931, 1660
AclWI GGATC 4 cut(s) 489, 941, 1084, 1715
AcoI YGGCCR 2 cut(s) 163, 629
AcsI RAATTY 4 cut(s) 393, 834, 1086, 1733
AcyI GRCGYC 2 cut(s) 545, 1342
AfaI GTAC 2 cut(s) 774, 1288
AfiI CCNNNNNNNGG 5 cut(s) 243, 524, 937, 1125, 1283
AflIII ACRYGT 2 cut(s) 681, 1110
AgsI TTSAA 8 cut(s) 98, 232, 292, 1048, 1189, 1354, 1442, 1571
AjnI CCWGG 2 cut(s) 498, 1693
AjuI GAANNNNNNNTTGG 4 cut(s) 102, 134, 1725, 1757
AluBI AGCT 8 cut(s) 28, 56, 309, 360, 590, 665, 1021, 1448
AluI AGCT 8 cut(s) 28, 56, 309, 360, 590, 665, 1021, 1448
Alw21I GWGCWC 4 cut(s) 130, 311, 1003, 1504
Alw26I GTCTC 3 cut(s) 161, 269, 1651
AlwI GGATC 4 cut(s) 489, 941, 1084, 1715
Ama87I CYCGRG 3 cut(s) 717, 1425, 1451
AoxI GGCC 4 cut(s) 163, 448, 629, 1432
ApeKI GCWGC 3 cut(s) 56, 862, 1690
ApoI RAATTY 4 cut(s) 393, 834, 1086, 1733
AseI ATTAAT 1 cut(s) 1716
Asp718I GGTACC 1 cut(s) 1286
AsuC2I CCSGG 1 cut(s) 1591
AsuHPI GGTGA 6 cut(s) 122, 322, 1022, 1374, 1652, 1810
AsuII TTCGAA 1 cut(s) 671
AvaI CYCGRG 3 cut(s) 717, 1425, 1451
AxyI CCTNAGG 2 cut(s) 1238, 1366
BaeI ACNNNNGTAYC 2 cut(s) 633, 666
BalI TGGCCA 1 cut(s) 165
BanI GGYRCC 1 cut(s) 1286
BanII GRGCYC 1 cut(s) 311
BbsI GAAGAC 1 cut(s) 241
Bbv12I GWGCWC 4 cut(s) 130, 311, 1003, 1504
BbvCI CCTCAGC 1 cut(s) 582
BbvI GCAGC 3 cut(s) 43, 849, 1702
BccI CCATC 7 cut(s) 181, 245, 409, 604, 824, 1156, 1629
BcgI CGANNNNNNTGC 4 cut(s) 38, 72, 418, 452
BciT130I CCWGG 2 cut(s) 500, 1695
BclI TGATCA 1 cut(s) 1197
BcnI CCSGG 1 cut(s) 1591
BcoDI GTCTC 3 cut(s) 161, 269, 1651
BfaI CTAG 3 cut(s) 1091, 1436, 1530
BfmI CTRYAG 1 cut(s) 1699
BisI GCNGC 4 cut(s) 57, 629, 863, 1691
BlsI GCNGC 4 cut(s) 58, 630, 864, 1692
Bme1390I CCNGG 3 cut(s) 500, 1591, 1695
BmeT110I CYCGRG 3 cut(s) 717, 1425, 1451
BmiI GGNNCC 1 cut(s) 1288
BmrFI CCNGG 3 cut(s) 500, 1591, 1695
BmsI GCATC 1 cut(s) 1736
BpiI GAAGAC 1 cut(s) 241
Bpu10I CCTNAGC 2 cut(s) 468, 582
Bpu14I TTCGAA 1 cut(s) 671
BpuEI CTTGAG 4 cut(s) 14, 332, 461, 987
BpuMI CCSGG 1 cut(s) 1591
BsaBI GATNNNNATC 1 cut(s) 1750
BsaHI GRCGYC 2 cut(s) 545, 1342
BsaI GGTCTC 1 cut(s) 269
BsaJI CCNNGG 3 cut(s) 866, 1294, 1590
Bsc4I CCNNNNNNNGG 5 cut(s) 243, 524, 937, 1125, 1283
Bse1I ACTGG 1 cut(s) 780
Bse21I CCTNAGG 2 cut(s) 1238, 1366
Bse3DI GCAATG 2 cut(s) 180, 280
Bse8I GATNNNNATC 1 cut(s) 1750
BseBI CCWGG 2 cut(s) 500, 1695
BseDI CCNNGG 3 cut(s) 866, 1294, 1590
BseGI GGATG 2 cut(s) 643, 1751
BseJI GATNNNNATC 1 cut(s) 1750
BseLI CCNNNNNNNGG 5 cut(s) 243, 524, 937, 1125, 1283
BseMI GCAATG 2 cut(s) 180, 280
BseMII CTCAG 6 cut(s) 573, 581, 1252, 1335, 1380, 1646
BseNI ACTGG 1 cut(s) 780
BseRI GAGGAG 1 cut(s) 335
BseX3I CGGCCG 1 cut(s) 629
BseXI GCAGC 3 cut(s) 43, 849, 1702
BsgI GTGCAG 1 cut(s) 477
Bsh1236I CGCG 1 cut(s) 933
Bsh1285I CGRYCG 1 cut(s) 632
BshFI GGCC 4 cut(s) 165, 450, 631, 1434
BshNI GGYRCC 1 cut(s) 1286
BsiEI CGRYCG 1 cut(s) 632
BsiHKAI GWGCWC 4 cut(s) 130, 311, 1003, 1504
BsiHKCI CYCGRG 3 cut(s) 717, 1425, 1451
BsiSI CCGG 2 cut(s) 632, 1590
BslFI GGGAC 2 cut(s) 486, 700
BslI CCNNNNNNNGG 5 cut(s) 243, 524, 937, 1125, 1283
BsmAI GTCTC 3 cut(s) 161, 269, 1651
BsmBI CGTCTC 1 cut(s) 161
BsmFI GGGAC 2 cut(s) 486, 700
BsmI GAATGC 1 cut(s) 877
BsnI GGCC 4 cut(s) 165, 450, 631, 1434
Bso31I GGTCTC 1 cut(s) 269
BsoBI CYCGRG 3 cut(s) 717, 1425, 1451
Bsp119I TTCGAA 1 cut(s) 671
Bsp1286I GDGCHC 4 cut(s) 130, 311, 1003, 1504
Bsp143I GATC 7 cut(s) 481, 946, 1076, 1197, 1414, 1627, 1707
BspACI CCGC 6 cut(s) 369, 557, 595, 628, 931, 1660
BspANI GGCC 4 cut(s) 165, 450, 631, 1434
BspCNI CTCAG 6 cut(s) 574, 580, 1251, 1334, 1379, 1647
BspFNI CGCG 1 cut(s) 933
BspHI TCATGA 1 cut(s) 1036
BspLI GGNNCC 1 cut(s) 1288
BspPI GGATC 4 cut(s) 489, 941, 1084, 1715
BspQI GCTCTTC 1 cut(s) 806
BspT104I TTCGAA 1 cut(s) 671
BspT107I GGYRCC 1 cut(s) 1286
BspTNI GGTCTC 1 cut(s) 269
BsrDI GCAATG 2 cut(s) 180, 280
BsrI ACTGG 1 cut(s) 780
BssECI CCNNGG 3 cut(s) 866, 1294, 1590
BssMI GATC 7 cut(s) 481, 946, 1076, 1197, 1414, 1627, 1707
BssNI GRCGYC 2 cut(s) 545, 1342
BssT1I CCWWGG 2 cut(s) 866, 1294
Bst2UI CCWGG 2 cut(s) 500, 1695
Bst4CI ACNGT 3 cut(s) 772, 845, 1487
Bst6I CTCTTC 4 cut(s) 272, 293, 806, 1654
BstACI GRCGYC 2 cut(s) 545, 1342
BstAPI GCANNNNNTGC 1 cut(s) 859
BstBI TTCGAA 1 cut(s) 671
BstC8I GCNNGC 7 cut(s) 452, 456, 496, 1312, 1405, 1520, 1608
BstDEI CTNAG 9 cut(s) 52, 468, 567, 582, 741, 1238, 1321, 1366, 1655
BstF5I GGATG 2 cut(s) 643, 1751
BstFNI CGCG 1 cut(s) 933
BstKTI GATC 7 cut(s) 484, 949, 1079, 1200, 1417, 1630, 1710
BstMAI GTCTC 3 cut(s) 161, 269, 1651
BstMBI GATC 7 cut(s) 481, 946, 1076, 1197, 1414, 1627, 1707
BstMCI CGRYCG 1 cut(s) 632
BstMWI GCNNNNNNNGC 9 cut(s) 53, 366, 426, 464, 563, 587, 859, 1307, 1477
BstNI CCWGG 2 cut(s) 500, 1695
BstNSI RCATGY 3 cut(s) 685, 1114, 1314
BstSCI CCNGG 3 cut(s) 498, 1589, 1693
BstSFI CTRYAG 1 cut(s) 1699
BstUI CGCG 1 cut(s) 933
BstV1I GCAGC 3 cut(s) 43, 849, 1702
BstV2I GAAGAC 1 cut(s) 241
BstX2I RGATCY 2 cut(s) 481, 946
BstXI CCANNNNNNTGG 1 cut(s) 1265
BstYI RGATCY 2 cut(s) 481, 946
BstZI CGGCCG 1 cut(s) 629
Bsu36I CCTNAGG 2 cut(s) 1238, 1366
BsuRI GGCC 4 cut(s) 165, 450, 631, 1434
BtsCI GGATG 2 cut(s) 643, 1751
BtsI GCAGTG 1 cut(s) 1095
BtsIMutI CAGTG 5 cut(s) 658, 768, 850, 988, 1095
Cac8I GCNNGC 7 cut(s) 452, 456, 496, 1312, 1405, 1520, 1608
CciI TCATGA 1 cut(s) 1036
CseI GACGC 2 cut(s) 1331, 1611
Csp6I GTAC 2 cut(s) 773, 1287
CviQI GTAC 2 cut(s) 773, 1287
DdeI CTNAG 9 cut(s) 52, 468, 567, 582, 741, 1238, 1321, 1366, 1655
DpnI GATC 7 cut(s) 483, 948, 1078, 1199, 1416, 1629, 1709
DpnII GATC 7 cut(s) 481, 946, 1076, 1197, 1414, 1627, 1707
EaeI YGGCCR 2 cut(s) 163, 629
EagI CGGCCG 1 cut(s) 629
Eam1104I CTCTTC 4 cut(s) 272, 293, 806, 1654
EarI CTCTTC 4 cut(s) 272, 293, 806, 1654
Ecl136II GAGCTC 1 cut(s) 309
EclXI CGGCCG 1 cut(s) 629
Eco130I CCWWGG 2 cut(s) 866, 1294
Eco147I AGGCCT 1 cut(s) 1434
Eco24I GRGCYC 1 cut(s) 311
Eco31I GGTCTC 1 cut(s) 269
Eco52I CGGCCG 1 cut(s) 629
Eco53kI GAGCTC 1 cut(s) 309
Eco81I CCTNAGG 2 cut(s) 1238, 1366
Eco88I CYCGRG 3 cut(s) 717, 1425, 1451
EcoICRI GAGCTC 1 cut(s) 309
EcoRI GAATTC 1 cut(s) 1086
EcoRII CCWGG 2 cut(s) 498, 1693
EcoT14I CCWWGG 2 cut(s) 866, 1294
EcoT22I ATGCAT 1 cut(s) 1618
EcoT38I GRGCYC 1 cut(s) 311
ErhI CCWWGG 2 cut(s) 866, 1294
Esp3I CGTCTC 1 cut(s) 161
FalI AAGNNNNNCTT 2 cut(s) 404, 436
FaqI GGGAC 2 cut(s) 486, 700
FauI CCCGC 2 cut(s) 362, 550
FbaI TGATCA 1 cut(s) 1197
Fnu4HI GCNGC 4 cut(s) 57, 629, 863, 1691
FokI GGATG 2 cut(s) 650, 1758
FriOI GRGCYC 1 cut(s) 311
Fsp4HI GCNGC 4 cut(s) 57, 629, 863, 1691
FspBI CTAG 3 cut(s) 1091, 1436, 1530
GluI GCNGC 4 cut(s) 57, 629, 863, 1691
HaeIII GGCC 4 cut(s) 165, 450, 631, 1434
HapII CCGG 2 cut(s) 632, 1590
HgaI GACGC 2 cut(s) 1331, 1611
Hin1I GRCGYC 2 cut(s) 545, 1342
HincII GTYRAC 1 cut(s) 766
HindII GTYRAC 1 cut(s) 766
HindIII AAGCTT 1 cut(s) 588
HinfI GANTC 7 cut(s) 374, 474, 673, 709, 737, 758, 914
HpaI GTTAAC 1 cut(s) 766
HpaII CCGG 2 cut(s) 632, 1590
HphI GGTGA 6 cut(s) 122, 322, 1022, 1374, 1652, 1810
Hpy166II GTNNAC 5 cut(s) 463, 766, 959, 1271, 1562
Hpy188I TCNGA 9 cut(s) 209, 757, 841, 897, 1161, 1333, 1576, 1627, 1656
Hpy188III TCNNGA 5 cut(s) 677, 717, 1037, 1451, 1530
Hpy8I GTNNAC 5 cut(s) 463, 766, 959, 1271, 1562
Hpy99I CGWCG 1 cut(s) 1635
HpyAV CCTTC 9 cut(s) 104, 289, 324, 343, 571, 1132, 1217, 1300, 1331
HpyCH4III ACNGT 3 cut(s) 772, 845, 1487
HpyCH4IV ACGT 2 cut(s) 545, 891
HpyCH4V TGCA 9 cut(s) 273, 494, 887, 1100, 1211, 1310, 1314, 1616, 1729
HpyF10VI GCNNNNNNNGC 9 cut(s) 53, 366, 426, 464, 563, 587, 859, 1307, 1477
HpyF3I CTNAG 9 cut(s) 52, 468, 567, 582, 741, 1238, 1321, 1366, 1655
HpySE526I ACGT 2 cut(s) 545, 891
Hsp92I GRCGYC 2 cut(s) 545, 1342
KpnI GGTACC 1 cut(s) 1290
Ksp22I TGATCA 1 cut(s) 1197
KspAI GTTAAC 1 cut(s) 766
Kzo9I GATC 7 cut(s) 481, 946, 1076, 1197, 1414, 1627, 1707
LguI GCTCTTC 1 cut(s) 806
LmnI GCTCC 1 cut(s) 314
Lsp1109I GCAGC 3 cut(s) 43, 849, 1702
LweI GCATC 1 cut(s) 1736
MaeI CTAG 3 cut(s) 1091, 1436, 1530
MaeII ACGT 2 cut(s) 545, 891
MaeIII GTNAC 3 cut(s) 970, 1459, 1681
MalI GATC 7 cut(s) 483, 948, 1078, 1199, 1416, 1629, 1709
MboI GATC 7 cut(s) 481, 946, 1076, 1197, 1414, 1627, 1707
MboII GAAGA 9 cut(s) 241, 259, 280, 416, 424, 823, 1454, 1641, 1822
MfeI CAATTG 1 cut(s) 1818
MflI RGATCY 2 cut(s) 481, 946
MhlI GDGCHC 4 cut(s) 130, 311, 1003, 1504
MlsI TGGCCA 1 cut(s) 165
MluCI AATT 7 cut(s) 393, 552, 834, 1086, 1388, 1733, 1818
MluNI TGGCCA 1 cut(s) 165
MlyI GAGTC 3 cut(s) 468, 752, 923
MmeI TCCRAC 3 cut(s) 521, 1685, 1723
Mox20I TGGCCA 1 cut(s) 165
Mph1103I ATGCAT 1 cut(s) 1618
MscI TGGCCA 1 cut(s) 165
MseI TTAA 5 cut(s) 551, 615, 765, 1215, 1716
MslI CAYNNNNRTG 1 cut(s) 402
Msp20I TGGCCA 1 cut(s) 165
MspI CCGG 2 cut(s) 632, 1590
MspR9I CCNGG 3 cut(s) 500, 1591, 1695
MunI CAATTG 1 cut(s) 1818
Mva1269I GAATGC 1 cut(s) 877
MvaI CCWGG 2 cut(s) 500, 1695
MvnI CGCG 1 cut(s) 933
MwoI GCNNNNNNNGC 9 cut(s) 53, 366, 426, 464, 563, 587, 859, 1307, 1477
NciI CCSGG 1 cut(s) 1591
NdeII GATC 7 cut(s) 481, 946, 1076, 1197, 1414, 1627, 1707
NlaIV GGNNCC 1 cut(s) 1288
NmuCI GTSAC 1 cut(s) 1681
NsiI ATGCAT 1 cut(s) 1618
NspI RCATGY 3 cut(s) 685, 1114, 1314
NspV TTCGAA 1 cut(s) 671
PaeI GCATGC 1 cut(s) 1314
PaeR7I CTCGAG 1 cut(s) 1451
PagI TCATGA 1 cut(s) 1036
PceI AGGCCT 1 cut(s) 1434
PciI ACATGT 2 cut(s) 681, 1110
PciSI GCTCTTC 1 cut(s) 806
PcsI WCGNNNNNNNCGW 1 cut(s) 888
PctI GAATGC 1 cut(s) 877
PfeI GAWTC 4 cut(s) 374, 673, 709, 737
PkrI GCNGC 4 cut(s) 58, 630, 864, 1692
PleI GAGTC 3 cut(s) 468, 752, 922
PpsI GAGTC 3 cut(s) 468, 752, 922
PscI ACATGT 2 cut(s) 681, 1110
PshBI ATTAAT 1 cut(s) 1716
Psp124BI GAGCTC 1 cut(s) 311
Psp6I CCWGG 2 cut(s) 498, 1693
PspGI CCWGG 2 cut(s) 498, 1693
PspN4I GGNNCC 1 cut(s) 1288
PsuI RGATCY 2 cut(s) 481, 946
RsaI GTAC 2 cut(s) 774, 1288
RsaNI GTAC 2 cut(s) 773, 1287
RseI CAYNNNNRTG 1 cut(s) 402
SacI GAGCTC 1 cut(s) 311
SapI GCTCTTC 1 cut(s) 806
SaqAI TTAA 5 cut(s) 551, 615, 765, 1215, 1716
SatI GCNGC 4 cut(s) 57, 629, 863, 1691
Sau3AI GATC 7 cut(s) 481, 946, 1076, 1197, 1414, 1627, 1707
SchI GAGTC 3 cut(s) 468, 752, 923
ScrFI CCNGG 3 cut(s) 500, 1591, 1695
SduI GDGCHC 4 cut(s) 130, 311, 1003, 1504
SfaNI GCATC 1 cut(s) 1736
SfcI CTRYAG 1 cut(s) 1699
Sfr274I CTCGAG 1 cut(s) 1451
SfuI TTCGAA 1 cut(s) 671
SlaI CTCGAG 1 cut(s) 1451
SmiMI CAYNNNNRTG 1 cut(s) 402
SmlI CTYRAG 5 cut(s) 29, 347, 476, 1002, 1451
SmoI CTYRAG 5 cut(s) 29, 347, 476, 1002, 1451
SphI GCATGC 1 cut(s) 1314
Sse9I AATT 7 cut(s) 393, 552, 834, 1086, 1388, 1733, 1818
SseBI AGGCCT 1 cut(s) 1434
SsiI CCGC 6 cut(s) 369, 557, 595, 628, 931, 1660
SspI AATATT 1 cut(s) 1350
SspMI CTAG 3 cut(s) 1091, 1436, 1530
SstI GAGCTC 1 cut(s) 311
StuI AGGCCT 1 cut(s) 1434
StyD4I CCNGG 3 cut(s) 498, 1589, 1693
StyI CCWWGG 2 cut(s) 866, 1294
TaaI ACNGT 3 cut(s) 772, 845, 1487
TaiI ACGT 2 cut(s) 548, 894
TaqI TCGA 5 cut(s) 671, 726, 1169, 1452, 1633
TasI AATT 7 cut(s) 393, 552, 834, 1086, 1388, 1733, 1818
TatI WGTACW 1 cut(s) 772
TauI GCSGC 1 cut(s) 631
TfiI GAWTC 4 cut(s) 374, 673, 709, 737
Tru1I TTAA 5 cut(s) 551, 615, 765, 1215, 1716
Tru9I TTAA 5 cut(s) 551, 615, 765, 1215, 1716
TscAI CASTG 5 cut(s) 658, 775, 850, 988, 1102
TseFI GTSAC 1 cut(s) 1681
TseI GCWGC 3 cut(s) 56, 862, 1690
Tsp45I GTSAC 1 cut(s) 1681
TspDTI ATGAA 9 cut(s) 17, 188, 525, 1025, 1053, 1145, 1173, 1746, 1823
TspGWI ACGGA 2 cut(s) 179, 751
TspRI CASTG 5 cut(s) 658, 775, 850, 988, 1102
VspI ATTAAT 1 cut(s) 1716
XapI RAATTY 4 cut(s) 393, 834, 1086, 1733
XbaI TCTAGA 1 cut(s) 1529
XceI RCATGY 3 cut(s) 685, 1114, 1314
XhoI CTCGAG 1 cut(s) 1451
XspI CTAG 3 cut(s) 1091, 1436, 1530
ZraI GACGTC 1 cut(s) 546
Zsp2I ATGCAT 1 cut(s) 1618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.