Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g25550 |
| malus_domestica | MD05G1093400.v1.1 MD10G1100300.v1.1 |
| prunus_persica | Prupe.8G138100_v2.0.a1 |
| pyrus_communis | pycom05g09250 pycom10g08630 |
| rosa_chinensis | RchiOBHm_Chr2g0123701 |
| rosa_laevigata | RLG00000018770 |
| rosa_multiflora | Rmu_sc0004915.1_g000001 Rmu_sc0006911.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00120410 |
| rosa_rugosa | Rorug02G0247400 |
| rosa_samantha | Rh2AG306400 Rh2BG314800 Rh2CG292800 Rh2DG330100 |
| rosa_wichuraiana | Rw2G024580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1423 |
| AccB1I | GGYRCC | 2 cut(s) | 1376, 1824 |
| AclWI | GGATC | 3 cut(s) | 781, 1662, 1793 |
| AcoI | YGGCCR | 3 cut(s) | 244, 707, 1761 |
| AcsI | RAATTY | 6 cut(s) | 471, 823, 1164, 1540, 1663, 1811 |
| AcuI | CTGAAG | 1 cut(s) | 357 |
| AcyI | GRCGYC | 1 cut(s) | 1420 |
| AfaI | GTAC | 1 cut(s) | 1366 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 430, 535, 602, 1015, 1035, 1361, 1504 |
| AflIII | ACRYGT | 1 cut(s) | 1188 |
| AgsI | TTSAA | 7 cut(s) | 179, 313, 373, 476, 1197, 1267, 1520 |
| AjiI | CACGTC | 1 cut(s) | 575 |
| AjnI | CCWGG | 1 cut(s) | 213 |
| AluBI | AGCT | 7 cut(s) | 43, 137, 202, 286, 1073, 1526, 1688 |
| AluI | AGCT | 7 cut(s) | 43, 137, 202, 286, 1073, 1526, 1688 |
| Alw21I | GWGCWC | 1 cut(s) | 1582 |
| Alw26I | GTCTC | 6 cut(s) | 176, 261, 350, 593, 999, 1729 |
| AlwI | GGATC | 3 cut(s) | 781, 1662, 1793 |
| AoxI | GGCC | 8 cut(s) | 151, 244, 432, 707, 1037, 1311, 1510, 1761 |
| ApeKI | GCWGC | 3 cut(s) | 137, 1593, 1768 |
| ApoI | RAATTY | 6 cut(s) | 471, 823, 1164, 1540, 1663, 1811 |
| AspLEI | GCGC | 2 cut(s) | 209, 1079 |
| AspS9I | GGNCC | 1 cut(s) | 151 |
| AsuC2I | CCSGG | 1 cut(s) | 1773 |
| AsuHPI | GGTGA | 8 cut(s) | 93, 203, 251, 403, 617, 929, 1106, 1888 |
| AsuII | TTCGAA | 1 cut(s) | 749 |
| AsuNHI | GCTAGC | 1 cut(s) | 1684 |
| BaeGI | GKGCMC | 1 cut(s) | 1829 |
| BalI | TGGCCA | 1 cut(s) | 1763 |
| BanI | GGYRCC | 2 cut(s) | 1376, 1824 |
| BauI | CACGAG | 1 cut(s) | 546 |
| Bbv12I | GWGCWC | 1 cut(s) | 1582 |
| BbvI | GCAGC | 3 cut(s) | 124, 1580, 1780 |
| BccI | CCATC | 4 cut(s) | 682, 754, 1707, 1862 |
| BceAI | ACGGC | 1 cut(s) | 138 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 119, 153 |
| BciT130I | CCWGG | 1 cut(s) | 215 |
| BclI | TGATCA | 3 cut(s) | 1234, 1275, 1705 |
| BcnI | CCSGG | 1 cut(s) | 1773 |
| BcoDI | GTCTC | 6 cut(s) | 176, 261, 350, 593, 999, 1729 |
| BfaI | CTAG | 5 cut(s) | 1169, 1514, 1608, 1685, 1865 |
| BfmI | CTRYAG | 2 cut(s) | 146, 1777 |
| BfoI | RGCGCY | 1 cut(s) | 210 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 243 |
| BglII | AGATCT | 1 cut(s) | 387 |
| BisI | GCNGC | 7 cut(s) | 138, 674, 707, 1591, 1594, 1736, 1769 |
| BlsI | GCNGC | 7 cut(s) | 139, 675, 708, 1592, 1595, 1737, 1770 |
| Bme1390I | CCNGG | 2 cut(s) | 215, 1773 |
| BmgBI | CACGTC | 1 cut(s) | 575 |
| BmgT120I | GGNCC | 1 cut(s) | 151 |
| BmiI | GGNNCC | 2 cut(s) | 1378, 1826 |
| BmrFI | CCNGG | 2 cut(s) | 215, 1773 |
| BmrI | ACTGGG | 1 cut(s) | 1023 |
| BmsI | GCATC | 5 cut(s) | 709, 1230, 1671, 1709, 1800 |
| BmtI | GCTAGC | 1 cut(s) | 1688 |
| BmuI | ACTGGG | 1 cut(s) | 1023 |
| BpmI | CTGGAG | 2 cut(s) | 1010, 1689 |
| Bpu14I | TTCGAA | 1 cut(s) | 749 |
| BpuEI | CTTGAG | 6 cut(s) | 413, 776, 1336, 1429, 1632, 1824 |
| BpuMI | CCSGG | 1 cut(s) | 1773 |
| Bsa29I | ATCGAT | 2 cut(s) | 804, 1711 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1790 |
| BsaHI | GRCGYC | 1 cut(s) | 1420 |
| BsaI | GGTCTC | 1 cut(s) | 350 |
| BsaJI | CCNNGG | 2 cut(s) | 1099, 1372 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1662, 1692 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 430, 535, 602, 1015, 1035, 1361, 1504 |
| Bse1I | ACTGG | 2 cut(s) | 1029, 1647 |
| Bse3DI | GCAATG | 2 cut(s) | 514, 729 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1790 |
| BseBI | CCWGG | 1 cut(s) | 215 |
| BseCI | ATCGAT | 2 cut(s) | 804, 1711 |
| BseDI | CCNNGG | 2 cut(s) | 1099, 1372 |
| BseGI | GGATG | 2 cut(s) | 1537, 1834 |
| BseJI | GATNNNNATC | 1 cut(s) | 1790 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 430, 535, 602, 1015, 1035, 1361, 1504 |
| BseMI | GCAATG | 2 cut(s) | 514, 729 |
| BseMII | CTCAG | 4 cut(s) | 58, 588, 659, 989 |
| BseNI | ACTGG | 2 cut(s) | 1029, 1647 |
| BseRI | GAGGAG | 1 cut(s) | 1322 |
| BseSI | GKGCMC | 1 cut(s) | 1829 |
| BseXI | GCAGC | 3 cut(s) | 124, 1580, 1780 |
| BsgI | GTGCAG | 1 cut(s) | 555 |
| BshFI | GGCC | 8 cut(s) | 153, 246, 434, 709, 1039, 1313, 1512, 1763 |
| BshNI | GGYRCC | 2 cut(s) | 1376, 1824 |
| BshVI | ATCGAT | 2 cut(s) | 804, 1711 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1582 |
| BsiSI | CCGG | 1 cut(s) | 1773 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 430, 535, 602, 1015, 1035, 1361, 1504 |
| BsmAI | GTCTC | 6 cut(s) | 176, 261, 350, 593, 999, 1729 |
| BsmBI | CGTCTC | 3 cut(s) | 176, 261, 593 |
| BsmI | GAATGC | 1 cut(s) | 955 |
| BsnI | GGCC | 8 cut(s) | 153, 246, 434, 709, 1039, 1313, 1512, 1763 |
| Bso31I | GGTCTC | 1 cut(s) | 350 |
| Bsp119I | TTCGAA | 1 cut(s) | 749 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1582, 1829 |
| BspANI | GGCC | 8 cut(s) | 153, 246, 434, 709, 1039, 1313, 1512, 1763 |
| BspCNI | CTCAG | 4 cut(s) | 57, 589, 658, 990 |
| BspDI | ATCGAT | 2 cut(s) | 804, 1711 |
| BspLI | GGNNCC | 2 cut(s) | 1378, 1826 |
| BspOI | GCTAGC | 1 cut(s) | 1688 |
| BspPI | GGATC | 3 cut(s) | 781, 1662, 1793 |
| BspQI | GCTCTTC | 1 cut(s) | 84 |
| BspT104I | TTCGAA | 1 cut(s) | 749 |
| BspT107I | GGYRCC | 2 cut(s) | 1376, 1824 |
| BspTNI | GGTCTC | 1 cut(s) | 350 |
| BsrDI | GCAATG | 2 cut(s) | 514, 729 |
| BsrI | ACTGG | 2 cut(s) | 1029, 1647 |
| BssECI | CCNNGG | 2 cut(s) | 1099, 1372 |
| BssNI | GRCGYC | 1 cut(s) | 1420 |
| BssSI | CACGAG | 1 cut(s) | 546 |
| BssT1I | CCWWGG | 1 cut(s) | 1099 |
| Bst2BI | CACGAG | 1 cut(s) | 546 |
| Bst2UI | CCWGG | 1 cut(s) | 215 |
| Bst4CI | ACNGT | 3 cut(s) | 617, 850, 1298 |
| Bst6I | CTCTTC | 4 cut(s) | 84, 333, 353, 374 |
| BstACI | GRCGYC | 1 cut(s) | 1420 |
| BstBI | TTCGAA | 1 cut(s) | 749 |
| BstC8I | GCNNGC | 5 cut(s) | 530, 534, 1075, 1483, 1686 |
| BstDEI | CTNAG | 6 cut(s) | 44, 133, 597, 645, 819, 998 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 428 |
| BstF5I | GGATG | 2 cut(s) | 1537, 1834 |
| BstH2I | RGCGCY | 1 cut(s) | 210 |
| BstHHI | GCGC | 2 cut(s) | 209, 1079 |
| BstMAI | GTCTC | 6 cut(s) | 176, 261, 350, 593, 999, 1729 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 134, 243, 542, 641, 950, 1385, 1555 |
| BstNI | CCWGG | 1 cut(s) | 215 |
| BstNSI | RCATGY | 2 cut(s) | 1192, 1392 |
| BstSCI | CCNGG | 2 cut(s) | 213, 1771 |
| BstSFI | CTRYAG | 2 cut(s) | 146, 1777 |
| BstSLI | GKGCMC | 1 cut(s) | 1829 |
| BstV1I | GCAGC | 3 cut(s) | 124, 1580, 1780 |
| BstX2I | RGATCY | 2 cut(s) | 387, 786 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1279, 1343, 1642 |
| BstYI | RGATCY | 2 cut(s) | 387, 786 |
| Bsu15I | ATCGAT | 2 cut(s) | 804, 1711 |
| BsuRI | GGCC | 8 cut(s) | 153, 246, 434, 709, 1039, 1313, 1512, 1763 |
| BsuTUI | ATCGAT | 2 cut(s) | 804, 1711 |
| BtgZI | GCGATG | 1 cut(s) | 1734 |
| BtrI | CACGTC | 1 cut(s) | 575 |
| BtsCI | GGATG | 2 cut(s) | 1537, 1834 |
| BtsIMutI | CAGTG | 2 cut(s) | 846, 1303 |
| Cac8I | GCNNGC | 5 cut(s) | 530, 534, 1075, 1483, 1686 |
| CfoI | GCGC | 2 cut(s) | 209, 1079 |
| Cfr13I | GGNCC | 1 cut(s) | 151 |
| ClaI | ATCGAT | 2 cut(s) | 804, 1711 |
| CseI | GACGC | 1 cut(s) | 721 |
| Csp6I | GTAC | 1 cut(s) | 1365 |
| CviQI | GTAC | 1 cut(s) | 1365 |
| DdeI | CTNAG | 6 cut(s) | 44, 133, 597, 645, 819, 998 |
| EaeI | YGGCCR | 3 cut(s) | 244, 707, 1761 |
| Eam1104I | CTCTTC | 4 cut(s) | 84, 333, 353, 374 |
| EarI | CTCTTC | 4 cut(s) | 84, 333, 353, 374 |
| EciI | GGCGGA | 1 cut(s) | 115 |
| Eco130I | CCWWGG | 1 cut(s) | 1099 |
| Eco147I | AGGCCT | 4 cut(s) | 434, 1039, 1313, 1512 |
| Eco31I | GGTCTC | 1 cut(s) | 350 |
| Eco57I | CTGAAG | 1 cut(s) | 357 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 428 |
| EcoRI | GAATTC | 3 cut(s) | 823, 1164, 1663 |
| EcoRII | CCWGG | 1 cut(s) | 213 |
| EcoT14I | CCWWGG | 1 cut(s) | 1099 |
| EcoT22I | ATGCAT | 3 cut(s) | 361, 514, 1245 |
| ErhI | CCWWGG | 1 cut(s) | 1099 |
| Esp3I | CGTCTC | 3 cut(s) | 176, 261, 593 |
| FauI | CCCGC | 2 cut(s) | 628, 1196 |
| FauNDI | CATATG | 1 cut(s) | 967 |
| FbaI | TGATCA | 3 cut(s) | 1234, 1275, 1705 |
| Fnu4HI | GCNGC | 7 cut(s) | 138, 674, 707, 1591, 1594, 1736, 1769 |
| FokI | GGATG | 2 cut(s) | 1544, 1821 |
| Fsp4HI | GCNGC | 7 cut(s) | 138, 674, 707, 1591, 1594, 1736, 1769 |
| FspBI | CTAG | 5 cut(s) | 1169, 1514, 1608, 1685, 1865 |
| GlaI | GCGC | 2 cut(s) | 208, 1078 |
| GluI | GCNGC | 7 cut(s) | 138, 674, 707, 1591, 1594, 1736, 1769 |
| GsuI | CTGGAG | 2 cut(s) | 1010, 1689 |
| HaeII | RGCGCY | 1 cut(s) | 210 |
| HaeIII | GGCC | 8 cut(s) | 153, 246, 434, 709, 1039, 1313, 1512, 1763 |
| HapII | CCGG | 1 cut(s) | 1773 |
| HgaI | GACGC | 1 cut(s) | 721 |
| HhaI | GCGC | 2 cut(s) | 209, 1079 |
| Hin1I | GRCGYC | 1 cut(s) | 1420 |
| Hin6I | GCGC | 2 cut(s) | 207, 1077 |
| HinP1I | GCGC | 2 cut(s) | 207, 1077 |
| HincII | GTYRAC | 3 cut(s) | 814, 844, 1060 |
| HindII | GTYRAC | 3 cut(s) | 814, 844, 1060 |
| HindIII | AAGCTT | 1 cut(s) | 1524 |
| HinfI | GANTC | 5 cut(s) | 273, 751, 836, 992, 1000 |
| HpaI | GTTAAC | 1 cut(s) | 1060 |
| HpaII | CCGG | 1 cut(s) | 1773 |
| HphI | GGTGA | 8 cut(s) | 93, 203, 251, 403, 617, 929, 1106, 1888 |
| Hpy166II | GTNNAC | 6 cut(s) | 551, 613, 814, 844, 1060, 1114 |
| Hpy188III | TCNNGA | 7 cut(s) | 755, 989, 1446, 1608, 1658, 1668, 1865 |
| Hpy8I | GTNNAC | 6 cut(s) | 551, 613, 814, 844, 1060, 1114 |
| HpyAV | CCTTC | 6 cut(s) | 185, 424, 434, 1295, 1747, 1839 |
| HpyCH4III | ACNGT | 3 cut(s) | 617, 850, 1298 |
| HpyCH4IV | ACGT | 4 cut(s) | 574, 1062, 1420, 1694 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 134, 243, 542, 641, 950, 1385, 1555 |
| HpyF3I | CTNAG | 6 cut(s) | 44, 133, 597, 645, 819, 998 |
| HpySE526I | ACGT | 4 cut(s) | 574, 1062, 1420, 1694 |
| Hsp92I | GRCGYC | 1 cut(s) | 1420 |
| HspAI | GCGC | 2 cut(s) | 207, 1077 |
| Ksp22I | TGATCA | 3 cut(s) | 1234, 1275, 1705 |
| KspAI | GTTAAC | 1 cut(s) | 1060 |
| LguI | GCTCTTC | 1 cut(s) | 84 |
| LmnI | GCTCC | 1 cut(s) | 291 |
| Lsp1109I | GCAGC | 3 cut(s) | 124, 1580, 1780 |
| LweI | GCATC | 5 cut(s) | 709, 1230, 1671, 1709, 1800 |
| MaeI | CTAG | 5 cut(s) | 1169, 1514, 1608, 1685, 1865 |
| MaeII | ACGT | 4 cut(s) | 574, 1062, 1420, 1694 |
| MaeIII | GTNAC | 1 cut(s) | 1048 |
| MboII | GAAGA | 8 cut(s) | 71, 77, 340, 350, 361, 725, 1532, 1900 |
| MflI | RGATCY | 2 cut(s) | 387, 786 |
| MhlI | GDGCHC | 2 cut(s) | 1582, 1829 |
| MlsI | TGGCCA | 1 cut(s) | 1763 |
| MluNI | TGGCCA | 1 cut(s) | 1763 |
| MlyI | GAGTC | 4 cut(s) | 282, 830, 1001, 1009 |
| MmeI | TCCRAC | 2 cut(s) | 599, 1763 |
| Mox20I | TGGCCA | 1 cut(s) | 1763 |
| Mph1103I | ATGCAT | 3 cut(s) | 361, 514, 1245 |
| MscI | TGGCCA | 1 cut(s) | 1763 |
| MseI | TTAA | 9 cut(s) | 380, 555, 683, 693, 885, 1013, 1059, 1293, 1431 |
| MslI | CAYNNNNRTG | 2 cut(s) | 189, 1277 |
| Msp20I | TGGCCA | 1 cut(s) | 1763 |
| MspI | CCGG | 1 cut(s) | 1773 |
| MspR9I | CCNGG | 2 cut(s) | 215, 1773 |
| Mva1269I | GAATGC | 1 cut(s) | 955 |
| MvaI | CCWGG | 1 cut(s) | 215 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 134, 243, 542, 641, 950, 1385, 1555 |
| NciI | CCSGG | 1 cut(s) | 1773 |
| NdeI | CATATG | 1 cut(s) | 967 |
| NheI | GCTAGC | 1 cut(s) | 1684 |
| NlaIV | GGNNCC | 2 cut(s) | 1378, 1826 |
| NmeAIII | GCCGAG | 2 cut(s) | 183, 1566 |
| NsiI | ATGCAT | 3 cut(s) | 361, 514, 1245 |
| NspI | RCATGY | 2 cut(s) | 1192, 1392 |
| NspV | TTCGAA | 1 cut(s) | 749 |
| PceI | AGGCCT | 4 cut(s) | 434, 1039, 1313, 1512 |
| PciI | ACATGT | 1 cut(s) | 1188 |
| PciSI | GCTCTTC | 1 cut(s) | 84 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 286 |
| PctI | GAATGC | 1 cut(s) | 955 |
| PfeI | GAWTC | 1 cut(s) | 751 |
| PflFI | GACNNNGTC | 1 cut(s) | 839 |
| PkrI | GCNGC | 7 cut(s) | 139, 675, 708, 1592, 1595, 1737, 1770 |
| PleI | GAGTC | 4 cut(s) | 281, 830, 1000, 1008 |
| PpsI | GAGTC | 4 cut(s) | 281, 830, 1000, 1008 |
| PscI | ACATGT | 1 cut(s) | 1188 |
| Psp6I | CCWGG | 1 cut(s) | 213 |
| PspGI | CCWGG | 1 cut(s) | 213 |
| PspN4I | GGNNCC | 2 cut(s) | 1378, 1826 |
| PspPI | GGNCC | 1 cut(s) | 151 |
| PsuI | RGATCY | 2 cut(s) | 387, 786 |
| PsyI | GACNNNGTC | 1 cut(s) | 839 |
| RsaI | GTAC | 1 cut(s) | 1366 |
| RsaNI | GTAC | 1 cut(s) | 1365 |
| RseI | CAYNNNNRTG | 2 cut(s) | 189, 1277 |
| SapI | GCTCTTC | 1 cut(s) | 84 |
| SaqAI | TTAA | 9 cut(s) | 380, 555, 683, 693, 885, 1013, 1059, 1293, 1431 |
| SatI | GCNGC | 7 cut(s) | 138, 674, 707, 1591, 1594, 1736, 1769 |
| Sau96I | GGNCC | 1 cut(s) | 151 |
| SchI | GAGTC | 4 cut(s) | 282, 830, 1001, 1009 |
| ScrFI | CCNGG | 2 cut(s) | 215, 1773 |
| SduI | GDGCHC | 2 cut(s) | 1582, 1829 |
| SfaNI | GCATC | 5 cut(s) | 709, 1230, 1671, 1709, 1800 |
| SfcI | CTRYAG | 2 cut(s) | 146, 1777 |
| SfuI | TTCGAA | 1 cut(s) | 749 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 189, 1277 |
| SmlI | CTYRAG | 6 cut(s) | 428, 755, 1315, 1444, 1647, 1839 |
| SmoI | CTYRAG | 6 cut(s) | 428, 755, 1315, 1444, 1647, 1839 |
| SseBI | AGGCCT | 4 cut(s) | 434, 1039, 1313, 1512 |
| SspI | AATATT | 1 cut(s) | 1428 |
| SspMI | CTAG | 5 cut(s) | 1169, 1514, 1608, 1685, 1865 |
| StuI | AGGCCT | 4 cut(s) | 434, 1039, 1313, 1512 |
| StyD4I | CCNGG | 2 cut(s) | 213, 1771 |
| StyI | CCWWGG | 1 cut(s) | 1099 |
| TaaI | ACNGT | 3 cut(s) | 617, 850, 1298 |
| TaiI | ACGT | 4 cut(s) | 577, 1065, 1423, 1697 |
| TaqI | TCGA | 4 cut(s) | 749, 804, 1185, 1711 |
| TaqII | GACCGA | 1 cut(s) | 1143 |
| TauI | GCSGC | 4 cut(s) | 676, 709, 1593, 1738 |
| TfiI | GAWTC | 1 cut(s) | 751 |
| Tru1I | TTAA | 9 cut(s) | 380, 555, 683, 693, 885, 1013, 1059, 1293, 1431 |
| Tru9I | TTAA | 9 cut(s) | 380, 555, 683, 693, 885, 1013, 1059, 1293, 1431 |
| TscAI | CASTG | 2 cut(s) | 853, 1303 |
| TseI | GCWGC | 3 cut(s) | 137, 1593, 1768 |
| TspDTI | ATGAA | 7 cut(s) | 71, 603, 711, 924, 1095, 1251, 1901 |
| TspRI | CASTG | 2 cut(s) | 853, 1303 |
| Tth111I | GACNNNGTC | 1 cut(s) | 839 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 428 |
| XapI | RAATTY | 6 cut(s) | 471, 823, 1164, 1540, 1663, 1811 |
| XbaI | TCTAGA | 2 cut(s) | 1607, 1864 |
| XceI | RCATGY | 2 cut(s) | 1192, 1392 |
| XspI | CTAG | 5 cut(s) | 1169, 1514, 1608, 1685, 1865 |
| ZraI | GACGTC | 1 cut(s) | 1421 |
| Zsp2I | ATGCAT | 3 cut(s) | 361, 514, 1245 |