Rroxscaffold_2G00120410

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0014644
Physical Location & Seq
Reverse (-)
52613943 .. 52615546
1604 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00120410.1

Sequence Viewer

Length: 1533 bp
ATGAACTTGTTTCTCTCATCTCAAAAGCTCAAGTCATCTCACATCGCTGCCGACTTAGCTGCTCTGCTACAAGGTCGTATCTCACACTCTCATCTCCTTCAAATCCATGCCCAAATCTTTGTTCTTGGTGCTCACCACAACGACTTGATAGCCACTCGTCTCATTGGCCACTACCCATCTCACATTGCTCTCCGTGTCTTTCATGGCCTCCGAAAACCCAATGTGTTCCCTTTCAACGCCATCATCAGGGTCTTCGCCGAACAGGGTCTCTTCTCCAATGCCTTGTCCCTCTTCAAAACCCTGAAACAGAGCTCCCTTTCGCCCAATGACTTCACCTTCTCTTTCCTTCTCAAGTCGTGTAGCTTTCGTTGCGGGGATTCTGTTTGTGTCAAGCAAATTCACACCCATGTTGTGAAGATGGGCTTTCTTCGAAACGAGTTCGTCTGTAATGGCCTGCTTGCTGTGTATGCTAAGGGACTCAAGGATTTGGGTTCTGCACGCCAGGTGTTTGATGAAATGCCTGACAAGGGTGTGGTTTGCTGTTGGACGTCTTTAATTGCGGGCTATGCTCAGTCAGGGAAGGCTGAGGAAGCTTTGCGGTTATTCGTGGTGATGGTTGAGGGAAATTTGCGGCCGGAGGATGATACAATGGTCAGTGTTTTATCAGCTTGTTCGAATCTTGACATGTCAAAGATTGAGAAATGGGTTTTGATCCTGTCCCGAGTTTTCGACAATGTGGATTCTAAGAATGTTGGTTTGGACTCCGTTAACACAGTACTGGTATATCTGTATGGGAAATGGGGGAAAATAGAGAAGAGCAGGGAAGCATTTGATGGAATTTCTGACAGTGGGAAGCGAAGTGTGCTGCCTTGGAATGCTATTATCGGTGCATATGTTCAGAATGGTTTTCCTGTGGAGTCTTTAAGTGTTTTCCGCGTAATGGTGGGAGATCCCACTCGTAAACCTAACCATGTTACGATGGTCAGTGTGCTTTCAGCTTGTGCTCAAGTTGGCGATTTAGAGCTTGGTAGGTGGGTTCATGAATACTTGAAATCTAAAGGAAACAGAGGTGTGGTTGGATCAAACAGAATTCTAGCCACTGCATTGATTGACATGTATTCCAAATGTGGGAGTTTGGAGAAGGCAAAGAGTGAAGGAGAGGAAGCCCTCAGGCTATTCTCAAAAATCCAAGATTTTGGTTTACAACCCAATGCTGGTACCTTCCTTGGTGCTTTATGTGCATGCAACCACTCAGGTTTTTCAGAGGAAGGGCATCAAATATTCAAGGATATGACCTCAGGCTTTTCCATTGCACCTAAATTAGAACATTATGCCTGCTATATGGATCTCCTTGCCCGAGTAGGCCTAGTTGAAGAAGCTCTCGAGGTTGTAACTTCCATGCCTTTTGAGCCTAACAGTATTGTGTGGGGTGCTCTGCTCGGAGGTTGCCTGCTCCACTCTAGATTAGACTATGCTGAATATGTTTCCCGTAAACTTGTTCAATCTGACCCCAACAATACCGGGGTTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

510

Amino Acids

56.14

Weight (kDa)

8.15

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 73 - 120 1.9e-09 PPR repeat family
PPR_2 PF13041 179 - 225 1.8e-07 PPR repeat family
PPR PF01535 181 - 208 2.9e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014644)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25550
malus_domestica MD05G1093400.v1.1 MD10G1100300.v1.1
prunus_persica Prupe.8G138100_v2.0.a1
pyrus_communis pycom05g09250 pycom10g08630
rosa_chinensis RchiOBHm_Chr2g0123701
rosa_laevigata RLG00000018770
rosa_multiflora Rmu_sc0004915.1_g000001 Rmu_sc0006911.1_g000001
rosa_roxburghii Rroxscaffold_2G00120410
rosa_rugosa Rorug02G0247400
rosa_samantha Rh2AG306400 Rh2BG314800 Rh2CG292800 Rh2DG330100
rosa_wichuraiana Rw2G024580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 551
Acc65I GGTACC 1 cut(s) 1217
AccB1I GGYRCC 1 cut(s) 1217
AccII CGCG 1 cut(s) 936
AciI CCGC 5 cut(s) 372, 560, 598, 631, 934
AclWI GGATC 4 cut(s) 706, 944, 1087, 1353
AcoI YGGCCR 2 cut(s) 166, 632
AcsI RAATTY 4 cut(s) 396, 625, 837, 1089
AcyI GRCGYC 1 cut(s) 548
AfaI GTAC 2 cut(s) 777, 1219
AfiI CCNNNNNNNGG 5 cut(s) 246, 527, 940, 1128, 1214
AflIII ACRYGT 2 cut(s) 684, 1113
AgsI TTSAA 7 cut(s) 101, 235, 295, 1051, 1285, 1373, 1502
AjnI CCWGG 1 cut(s) 501
AjuI GAANNNNNNNTTGG 4 cut(s) 105, 137, 740, 772
AluBI AGCT 9 cut(s) 28, 59, 312, 363, 593, 668, 998, 1024, 1379
AluI AGCT 9 cut(s) 28, 59, 312, 363, 593, 668, 998, 1024, 1379
Alw21I GWGCWC 4 cut(s) 133, 314, 1006, 1435
Alw26I GTCTC 2 cut(s) 164, 272
AlwI GGATC 4 cut(s) 706, 944, 1087, 1353
Ama87I CYCGRG 3 cut(s) 720, 1356, 1382
AoxI GGCC 5 cut(s) 166, 205, 451, 632, 1363
ApeKI GCWGC 3 cut(s) 47, 59, 865
ApoI RAATTY 4 cut(s) 396, 625, 837, 1089
Asp718I GGTACC 1 cut(s) 1217
AsuC2I CCSGG 1 cut(s) 1522
AsuHPI GGTGA 3 cut(s) 125, 325, 622
AsuII TTCGAA 2 cut(s) 430, 674
AvaI CYCGRG 3 cut(s) 720, 1356, 1382
AxyI CCTNAGG 2 cut(s) 1169, 1297
BaeI ACNNNNGTAYC 2 cut(s) 636, 669
BalI TGGCCA 1 cut(s) 168
BanI GGYRCC 1 cut(s) 1217
BanII GRGCYC 1 cut(s) 314
BbsI GAAGAC 1 cut(s) 244
Bbv12I GWGCWC 4 cut(s) 133, 314, 1006, 1435
BbvCI CCTCAGC 1 cut(s) 585
BbvI GCAGC 3 cut(s) 34, 46, 852
BccI CCATC 6 cut(s) 184, 248, 412, 607, 827, 973
BcgI CGANNNNNNTGC 2 cut(s) 41, 75
BciT130I CCWGG 1 cut(s) 503
BcnI CCSGG 1 cut(s) 1522
BcoDI GTCTC 2 cut(s) 164, 272
BfaI CTAG 3 cut(s) 1094, 1367, 1461
BisI GCNGC 4 cut(s) 48, 60, 632, 866
BlsI GCNGC 4 cut(s) 49, 61, 633, 867
BmcAI AGTACT 1 cut(s) 777
Bme1390I CCNGG 2 cut(s) 503, 1522
BmeT110I CYCGRG 3 cut(s) 720, 1356, 1382
BmiI GGNNCC 1 cut(s) 1219
BmrFI CCNGG 2 cut(s) 503, 1522
BmsI GCATC 1 cut(s) 1282
BpiI GAAGAC 1 cut(s) 244
Bpu10I CCTNAGC 2 cut(s) 471, 585
Bpu14I TTCGAA 2 cut(s) 430, 674
BpuEI CTTGAG 4 cut(s) 14, 335, 464, 990
BpuMI CCSGG 1 cut(s) 1522
BsaHI GRCGYC 1 cut(s) 548
BsaI GGTCTC 1 cut(s) 272
BsaJI CCNNGG 3 cut(s) 869, 1225, 1521
Bsc4I CCNNNNNNNGG 5 cut(s) 246, 527, 940, 1128, 1214
Bse1I ACTGG 1 cut(s) 783
Bse21I CCTNAGG 2 cut(s) 1169, 1297
Bse3DI GCAATG 2 cut(s) 183, 1308
BseBI CCWGG 1 cut(s) 503
BseDI CCNNGG 3 cut(s) 869, 1225, 1521
BseGI GGATG 1 cut(s) 646
BseLI CCNNNNNNNGG 5 cut(s) 246, 527, 940, 1128, 1214
BseMI GCAATG 2 cut(s) 183, 1308
BseMII CTCAG 5 cut(s) 576, 584, 1183, 1266, 1311
BseNI ACTGG 1 cut(s) 783
BseX3I CGGCCG 1 cut(s) 632
BseXI GCAGC 3 cut(s) 34, 46, 852
BsgI GTGCAG 1 cut(s) 480
Bsh1236I CGCG 1 cut(s) 936
Bsh1285I CGRYCG 1 cut(s) 635
BshFI GGCC 5 cut(s) 168, 207, 453, 634, 1365
BshNI GGYRCC 1 cut(s) 1217
BsiEI CGRYCG 1 cut(s) 635
BsiHKAI GWGCWC 4 cut(s) 133, 314, 1006, 1435
BsiHKCI CYCGRG 3 cut(s) 720, 1356, 1382
BsiSI CCGG 2 cut(s) 635, 1521
BslFI GGGAC 3 cut(s) 271, 489, 703
BslI CCNNNNNNNGG 5 cut(s) 246, 527, 940, 1128, 1214
BsmAI GTCTC 2 cut(s) 164, 272
BsmBI CGTCTC 1 cut(s) 164
BsmFI GGGAC 3 cut(s) 271, 489, 703
BsmI GAATGC 1 cut(s) 880
BsnI GGCC 5 cut(s) 168, 207, 453, 634, 1365
Bso31I GGTCTC 1 cut(s) 272
BsoBI CYCGRG 3 cut(s) 720, 1356, 1382
Bsp119I TTCGAA 2 cut(s) 430, 674
Bsp1286I GDGCHC 4 cut(s) 133, 314, 1006, 1435
Bsp143I GATC 4 cut(s) 711, 949, 1079, 1345
BspACI CCGC 5 cut(s) 372, 560, 598, 631, 934
BspANI GGCC 5 cut(s) 168, 207, 453, 634, 1365
BspCNI CTCAG 5 cut(s) 577, 583, 1182, 1265, 1310
BspFNI CGCG 1 cut(s) 936
BspHI TCATGA 1 cut(s) 1039
BspLI GGNNCC 1 cut(s) 1219
BspPI GGATC 4 cut(s) 706, 944, 1087, 1353
BspQI GCTCTTC 1 cut(s) 809
BspT104I TTCGAA 2 cut(s) 430, 674
BspT107I GGYRCC 1 cut(s) 1217
BspTNI GGTCTC 1 cut(s) 272
BsrDI GCAATG 2 cut(s) 183, 1308
BsrI ACTGG 1 cut(s) 783
BssECI CCNNGG 3 cut(s) 869, 1225, 1521
BssMI GATC 4 cut(s) 711, 949, 1079, 1345
BssNI GRCGYC 1 cut(s) 548
BssT1I CCWWGG 2 cut(s) 869, 1225
Bst2UI CCWGG 1 cut(s) 503
Bst4CI ACNGT 3 cut(s) 775, 848, 1418
Bst6I CTCTTC 3 cut(s) 275, 296, 809
BstACI GRCGYC 1 cut(s) 548
BstBI TTCGAA 2 cut(s) 430, 674
BstC8I GCNNGC 7 cut(s) 455, 459, 499, 562, 1243, 1336, 1451
BstDEI CTNAG 8 cut(s) 55, 471, 570, 585, 744, 1169, 1252, 1297
BstF5I GGATG 1 cut(s) 646
BstFNI CGCG 1 cut(s) 936
BstKTI GATC 4 cut(s) 714, 952, 1082, 1348
BstMAI GTCTC 2 cut(s) 164, 272
BstMBI GATC 4 cut(s) 711, 949, 1079, 1345
BstMCI CGRYCG 1 cut(s) 635
BstMWI GCNNNNNNNGC 8 cut(s) 56, 369, 467, 566, 590, 862, 1238, 1408
BstNI CCWGG 1 cut(s) 503
BstNSI RCATGY 3 cut(s) 688, 1117, 1245
BstSCI CCNGG 2 cut(s) 501, 1520
BstUI CGCG 1 cut(s) 936
BstV1I GCAGC 3 cut(s) 34, 46, 852
BstV2I GAAGAC 1 cut(s) 244
BstX2I RGATCY 2 cut(s) 949, 1345
BstXI CCANNNNNNTGG 1 cut(s) 1196
BstYI RGATCY 2 cut(s) 949, 1345
BstZI CGGCCG 1 cut(s) 632
Bsu36I CCTNAGG 2 cut(s) 1169, 1297
BsuRI GGCC 5 cut(s) 168, 207, 453, 634, 1365
BtgZI GCGATG 1 cut(s) 28
BtsCI GGATG 1 cut(s) 646
BtsI GCAGTG 1 cut(s) 1098
BtsIMutI CAGTG 4 cut(s) 661, 853, 991, 1098
Cac8I GCNNGC 7 cut(s) 455, 459, 499, 562, 1243, 1336, 1451
CciI TCATGA 1 cut(s) 1039
Csp6I GTAC 2 cut(s) 776, 1218
CviAII CATG 9 cut(s) 107, 203, 407, 685, 971, 1040, 1114, 1242, 1399
CviQI GTAC 2 cut(s) 776, 1218
DdeI CTNAG 8 cut(s) 55, 471, 570, 585, 744, 1169, 1252, 1297
DpnI GATC 4 cut(s) 713, 951, 1081, 1347
DpnII GATC 4 cut(s) 711, 949, 1079, 1345
EaeI YGGCCR 2 cut(s) 166, 632
EagI CGGCCG 1 cut(s) 632
Eam1104I CTCTTC 3 cut(s) 275, 296, 809
EarI CTCTTC 3 cut(s) 275, 296, 809
Ecl136II GAGCTC 1 cut(s) 312
EclXI CGGCCG 1 cut(s) 632
Eco130I CCWWGG 2 cut(s) 869, 1225
Eco147I AGGCCT 1 cut(s) 1365
Eco24I GRGCYC 1 cut(s) 314
Eco31I GGTCTC 1 cut(s) 272
Eco52I CGGCCG 1 cut(s) 632
Eco53kI GAGCTC 1 cut(s) 312
Eco81I CCTNAGG 2 cut(s) 1169, 1297
Eco88I CYCGRG 3 cut(s) 720, 1356, 1382
EcoICRI GAGCTC 1 cut(s) 312
EcoRI GAATTC 1 cut(s) 1089
EcoRII CCWGG 1 cut(s) 501
EcoT14I CCWWGG 2 cut(s) 869, 1225
EcoT38I GRGCYC 1 cut(s) 314
ErhI CCWWGG 2 cut(s) 869, 1225
Esp3I CGTCTC 1 cut(s) 164
FaeI CATG 9 cut(s) 110, 206, 410, 688, 974, 1043, 1117, 1245, 1402
FalI AAGNNNNNCTT 2 cut(s) 407, 439
FaqI GGGAC 3 cut(s) 271, 489, 703
FatI CATG 9 cut(s) 106, 202, 406, 684, 970, 1039, 1113, 1241, 1398
FauI CCCGC 2 cut(s) 365, 553
FauNDI CATATG 1 cut(s) 892
Fnu4HI GCNGC 4 cut(s) 48, 60, 632, 866
FokI GGATG 1 cut(s) 653
FriOI GRGCYC 1 cut(s) 314
Fsp4HI GCNGC 4 cut(s) 48, 60, 632, 866
FspBI CTAG 3 cut(s) 1094, 1367, 1461
GluI GCNGC 4 cut(s) 48, 60, 632, 866
HaeIII GGCC 5 cut(s) 168, 207, 453, 634, 1365
HapII CCGG 2 cut(s) 635, 1521
Hin1I GRCGYC 1 cut(s) 548
Hin1II CATG 9 cut(s) 110, 206, 410, 688, 974, 1043, 1117, 1245, 1402
HincII GTYRAC 1 cut(s) 769
HindII GTYRAC 1 cut(s) 769
HindIII AAGCTT 1 cut(s) 591
HinfI GANTC 6 cut(s) 377, 477, 676, 740, 761, 917
HpaI GTTAAC 1 cut(s) 769
HpaII CCGG 2 cut(s) 635, 1521
HphI GGTGA 3 cut(s) 125, 325, 622
Hpy166II GTNNAC 4 cut(s) 769, 962, 1202, 1493
Hpy188I TCNGA 6 cut(s) 212, 844, 900, 1264, 1442, 1507
Hpy188III TCNNGA 5 cut(s) 680, 720, 1040, 1382, 1461
Hpy8I GTNNAC 4 cut(s) 769, 962, 1202, 1493
HpyAV CCTTC 8 cut(s) 107, 346, 356, 574, 1135, 1148, 1231, 1262
HpyCH4III ACNGT 3 cut(s) 775, 848, 1418
HpyCH4IV ACGT 1 cut(s) 548
HpyCH4V TGCA 6 cut(s) 497, 890, 1103, 1241, 1245, 1313
HpyF10VI GCNNNNNNNGC 8 cut(s) 56, 369, 467, 566, 590, 862, 1238, 1408
HpyF3I CTNAG 8 cut(s) 55, 471, 570, 585, 744, 1169, 1252, 1297
HpySE526I ACGT 1 cut(s) 548
Hsp92I GRCGYC 1 cut(s) 548
Hsp92II CATG 9 cut(s) 110, 206, 410, 688, 974, 1043, 1117, 1245, 1402
KpnI GGTACC 1 cut(s) 1221
KspAI GTTAAC 1 cut(s) 769
Kzo9I GATC 4 cut(s) 711, 949, 1079, 1345
LguI GCTCTTC 1 cut(s) 809
LmnI GCTCC 2 cut(s) 317, 1458
Lsp1109I GCAGC 3 cut(s) 34, 46, 852
LweI GCATC 1 cut(s) 1282
MaeI CTAG 3 cut(s) 1094, 1367, 1461
MaeII ACGT 1 cut(s) 548
MaeIII GTNAC 2 cut(s) 973, 1390
MalI GATC 4 cut(s) 713, 951, 1081, 1347
MboI GATC 4 cut(s) 711, 949, 1079, 1345
MboII GAAGA 7 cut(s) 244, 262, 283, 419, 427, 826, 1385
MflI RGATCY 2 cut(s) 949, 1345
MhlI GDGCHC 4 cut(s) 133, 314, 1006, 1435
MlsI TGGCCA 1 cut(s) 168
MluCI AATT 6 cut(s) 396, 555, 625, 837, 1089, 1319
MluNI TGGCCA 1 cut(s) 168
MlyI GAGTC 3 cut(s) 471, 755, 926
MmeI TCCRAC 2 cut(s) 524, 1057
Mox20I TGGCCA 1 cut(s) 168
MscI TGGCCA 1 cut(s) 168
MseI TTAA 3 cut(s) 554, 768, 923
MslI CAYNNNNRTG 1 cut(s) 405
Msp20I TGGCCA 1 cut(s) 168
MspI CCGG 2 cut(s) 635, 1521
MspR9I CCNGG 2 cut(s) 503, 1522
Mva1269I GAATGC 1 cut(s) 880
MvaI CCWGG 1 cut(s) 503
MvnI CGCG 1 cut(s) 936
MwoI GCNNNNNNNGC 8 cut(s) 56, 369, 467, 566, 590, 862, 1238, 1408
NciI CCSGG 1 cut(s) 1522
NdeI CATATG 1 cut(s) 892
NdeII GATC 4 cut(s) 711, 949, 1079, 1345
NlaIII CATG 9 cut(s) 110, 206, 410, 688, 974, 1043, 1117, 1245, 1402
NlaIV GGNNCC 1 cut(s) 1219
NspI RCATGY 3 cut(s) 688, 1117, 1245
NspV TTCGAA 2 cut(s) 430, 674
PaeI GCATGC 1 cut(s) 1245
PaeR7I CTCGAG 1 cut(s) 1382
PagI TCATGA 1 cut(s) 1039
PceI AGGCCT 1 cut(s) 1365
PciI ACATGT 2 cut(s) 684, 1113
PciSI GCTCTTC 1 cut(s) 809
PctI GAATGC 1 cut(s) 880
PfeI GAWTC 3 cut(s) 377, 676, 740
PkrI GCNGC 4 cut(s) 49, 61, 633, 867
PleI GAGTC 3 cut(s) 471, 755, 925
PpsI GAGTC 3 cut(s) 471, 755, 925
PscI ACATGT 2 cut(s) 684, 1113
Psp124BI GAGCTC 1 cut(s) 314
Psp6I CCWGG 1 cut(s) 501
PspGI CCWGG 1 cut(s) 501
PspN4I GGNNCC 1 cut(s) 1219
PsuI RGATCY 2 cut(s) 949, 1345
RsaI GTAC 2 cut(s) 777, 1219
RsaNI GTAC 2 cut(s) 776, 1218
RseI CAYNNNNRTG 1 cut(s) 405
SacI GAGCTC 1 cut(s) 314
SapI GCTCTTC 1 cut(s) 809
SaqAI TTAA 3 cut(s) 554, 768, 923
SatI GCNGC 4 cut(s) 48, 60, 632, 866
Sau3AI GATC 4 cut(s) 711, 949, 1079, 1345
ScaI AGTACT 1 cut(s) 777
SchI GAGTC 3 cut(s) 471, 755, 926
ScrFI CCNGG 2 cut(s) 503, 1522
SduI GDGCHC 4 cut(s) 133, 314, 1006, 1435
SfaNI GCATC 1 cut(s) 1282
Sfr274I CTCGAG 1 cut(s) 1382
SfuI TTCGAA 2 cut(s) 430, 674
SlaI CTCGAG 1 cut(s) 1382
SmiMI CAYNNNNRTG 1 cut(s) 405
SmlI CTYRAG 5 cut(s) 29, 350, 479, 1005, 1382
SmoI CTYRAG 5 cut(s) 29, 350, 479, 1005, 1382
SphI GCATGC 1 cut(s) 1245
Sse9I AATT 6 cut(s) 396, 555, 625, 837, 1089, 1319
SseBI AGGCCT 1 cut(s) 1365
SsiI CCGC 5 cut(s) 372, 560, 598, 631, 934
SspI AATATT 1 cut(s) 1281
SspMI CTAG 3 cut(s) 1094, 1367, 1461
SstI GAGCTC 1 cut(s) 314
StuI AGGCCT 1 cut(s) 1365
StyD4I CCNGG 2 cut(s) 501, 1520
StyI CCWWGG 2 cut(s) 869, 1225
TaaI ACNGT 3 cut(s) 775, 848, 1418
TaiI ACGT 1 cut(s) 551
TaqI TCGA 4 cut(s) 430, 674, 729, 1383
TasI AATT 6 cut(s) 396, 555, 625, 837, 1089, 1319
TatI WGTACW 1 cut(s) 775
TauI GCSGC 1 cut(s) 634
TfiI GAWTC 3 cut(s) 377, 676, 740
Tru1I TTAA 3 cut(s) 554, 768, 923
Tru9I TTAA 3 cut(s) 554, 768, 923
TscAI CASTG 4 cut(s) 661, 853, 991, 1105
TseI GCWGC 3 cut(s) 47, 59, 865
TspDTI ATGAA 5 cut(s) 17, 191, 528, 1028, 1056
TspGWI ACGGA 2 cut(s) 182, 754
TspRI CASTG 4 cut(s) 661, 853, 991, 1105
XapI RAATTY 4 cut(s) 396, 625, 837, 1089
XbaI TCTAGA 1 cut(s) 1460
XceI RCATGY 3 cut(s) 688, 1117, 1245
XhoI CTCGAG 1 cut(s) 1382
XspI CTAG 3 cut(s) 1094, 1367, 1461
ZraI GACGTC 1 cut(s) 549
ZrmI AGTACT 1 cut(s) 777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.