Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0007440

Physical Location & Seq

Genomic Coordinates Reverse (-)

16766111 .. 16770305

Gene Structure 4195 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G157100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1248 bp

ATGATGAGGTTGAGCATCTTGGGAATAGCATTGAGTTCCAATTCCTATTATTGCGCATCCCTTTCCGTCATTCCACTCATCCCCACTTCTTCTTCTTCAACCTCCTCTCTCTCATTCTCCAAGAAGTTCACTCCTTCAGCTTCAGGTCTCTCTCTCTCAAATCCCAACTTGACAGGAAAGTTTGTGACAGGGAAGAGGAATTTAGTTTTACGCGGCCAAAGTGGTGGCTTTGAGAGTGAGCTCAAACCAGGTGATTTGATGGAATCGGAGAAGGAATTCCCGGAATTCAACCGAAACCTTTACCCGAGTATAGAGCCGTACAGTTCTGGCTTTCTGAAGGTTTCGGATATTCATACAATCTATTGGGAGCAGTCTGGAAATCCAAATGGGCATCCTGTAGTCTTTCTTCATGGGGGTCCAGGAGGAGGAACTGCACCAAGTAATCGCAAATTCTTTGATCCTGATTTTTACAGAATCATTCTATTTGATCAGCGAGGTGCTGGGAAAAGTACCCCACATGCTTGCTTGGTAGAAAATACCACATGGGATCTAATTAGTGACATTGAAAAGCTCAGGGAACACTTGGAAATTCCAGAATGGCAGGTTTTCGGTGGGTCATGGGGTAGTACACTTGCCCTTGCATATAGCCAATTACACCCTGATAAGGTTACTGGCATGGTTCTTAGAGGGATTTTTCTTTTGAGAAAGAAAGAGATTGATTGGTTTTATGAGGGTGGTGCTGCTTCCATATTTCCTGACGCTTGGGAGCCATTTCGAGATCTTATTCCAGAAAATGAGAGGGGAAGTTTTGTCGATGCCTACGGGAAGAGATTAAACTCCGATGATCAGGAAGTACAATATGCAGCTGCTAGAGCATGGACCATGTGGGAAATGATGACTGCCCATCTTTTTCCAAATAATGATAACATCAAGAAAGGAGAGGACGATAAGTTTTCATTGGCATTTGCAAGGATTGAAAATCATTACTTTGTGAACAGAGGATTTTTTCCTTCAGATGGGTTCCTGTTAGATAACATTGATAAGATAAGGCATATAAAAACTACAATCGTACAGGGAAGATATGATGTTTGCTGCCCCATGATGTCAGCTTGGGATCTTCATAAAGCATGGCCAGAAGCTGATCTCAAGGTTATTCAAGATGCAGGGCATTCTGCTAATGAACCAGGAATAGCTGCAGAACTTGTGGCCGCAAATGAGAATCTGAAACACGTGAAGAAAGGAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00330 map00330

Pfam Domains

Protein Families

Abhydrolase_1

Protein Analysis

416

Amino Acids

46.33

Weight (kDa)

5.87

Isoelectric Point (pI)

35.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007440)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14260 AT2G14260 AT2G14260 AT2G14260
fragaria_vesca	FvH4_2g02550
malus_domestica	MD10G1115000.v1.1
prunus_persica	Prupe.8G157100_v2.0.a1 Prupe.8G157100_v2.0.a1
pyrus_communis	pycom05g10790 pycom10g09950 pycom15g16330
rosa_chinensis	RchiOBHm_Chr6g0246361
rosa_laevigata	RLG00000015261
rosa_multiflora	Rmu_co8135098.1_g000001 Rmu_sc0001066.1_g000006 Rmu_sc0008965.1_g000003
rosa_roxburghii	Rroxscaffold_7G00214650
rosa_rugosa	Rorug05G0520500
rosa_samantha	Rh6AG034700 Rh6BG029800 Rh6CG030200 Rh6CG067300 Rh6DG029100
rosa_wichuraiana	Rw6G002810 Rw6G002970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	55
Acc36I	ACCTGC	1 cut(s)	592
AccII	CGCG	1 cut(s)	213
AciI	CCGC	2 cut(s)	213, 1209
AclWI	GGATC	3 cut(s)	452, 555, 1122
AcoI	YGGCCR	3 cut(s)	214, 1130, 1206
AcsI	RAATTY	5 cut(s)	199, 275, 284, 449, 588
AcuI	CTGAAG	4 cut(s)	120, 126, 356, 996
AcvI	CACGTG	1 cut(s)	1231
AfaI	GTAC	5 cut(s)	320, 511, 628, 855, 1071
AfiI	CCNNNNNNNGG	3 cut(s)	425, 664, 1016
AflIII	ACRYGT	1 cut(s)	1228
AgsI	TTSAA	5 cut(s)	99, 289, 566, 977, 1157
AjnI	CCWGG	3 cut(s)	247, 418, 1183
AluBI	AGCT	7 cut(s)	140, 241, 571, 866, 1109, 1139, 1193
AluI	AGCT	7 cut(s)	140, 241, 571, 866, 1109, 1139, 1193
Alw21I	GWGCWC	1 cut(s)	243
Alw26I	GTCTC	1 cut(s)	152
AlwI	GGATC	3 cut(s)	452, 555, 1122
AlwNI	CAGNNNCTG	1 cut(s)	1139
Ama87I	CYCGRG	1 cut(s)	304
AoxI	GGCC	3 cut(s)	214, 1130, 1206
ApeKI	GCWGC	5 cut(s)	740, 863, 866, 1092, 1193
ApoI	RAATTY	5 cut(s)	199, 275, 284, 449, 588
Asp700I	GAANNNNTTC	1 cut(s)	275
AspLEI	GCGC	1 cut(s)	56
AspS9I	GGNCC	2 cut(s)	416, 879
AsuC2I	CCSGG	1 cut(s)	281
AsuHPI	GGTGA	1 cut(s)	263
AvaI	CYCGRG	1 cut(s)	304
AvaII	GGWCC	2 cut(s)	416, 879
BalI	TGGCCA	1 cut(s)	1132
BanII	GRGCYC	1 cut(s)	243
BarI	GAAGNNNNNNTAC	2 cut(s)	390, 422
BbrPI	CACGTG	1 cut(s)	1231
Bbv12I	GWGCWC	1 cut(s)	243
BbvI	GCAGC	5 cut(s)	727, 853, 875, 1079, 1180
BccI	CCATC	3 cut(s)	253, 912, 1010
BceAI	ACGGC	1 cut(s)	301
BciT130I	CCWGG	3 cut(s)	249, 420, 1185
BclI	TGATCA	2 cut(s)	487, 844
BcnI	CCSGG	1 cut(s)	281
BcoDI	GTCTC	1 cut(s)	152
BfaI	CTAG	1 cut(s)	870
BfmI	CTRYAG	2 cut(s)	396, 1194
BfuAI	ACCTGC	1 cut(s)	592
BglII	AGATCT	1 cut(s)	778
BisI	GCNGC	7 cut(s)	214, 741, 864, 867, 1093, 1194, 1209
BlsI	GCNGC	7 cut(s)	215, 742, 865, 868, 1094, 1195, 1210
Bme1390I	CCNGG	4 cut(s)	249, 281, 420, 1185
Bme18I	GGWCC	2 cut(s)	416, 879
BmeT110I	CYCGRG	1 cut(s)	304
BmgT120I	GGNCC	2 cut(s)	416, 879
BmiI	GGNNCC	3 cut(s)	417, 768, 1022
BmrFI	CCNGG	4 cut(s)	249, 281, 420, 1185
BmsI	GCATC	5 cut(s)	24, 65, 400, 805, 1150
Bpu10I	CCTNAGC	1 cut(s)	572
BpuEI	CTTGAG	1 cut(s)	1130
BpuMI	CCSGG	1 cut(s)	281
BsaAI	YACGTR	1 cut(s)	1231
BsaI	GGTCTC	1 cut(s)	152
Bsc4I	CCNNNNNNNGG	3 cut(s)	425, 664, 1016
Bse1I	ACTGG	1 cut(s)	676
BseBI	CCWGG	3 cut(s)	249, 420, 1185
BseGI	GGATG	3 cut(s)	56, 78, 391
BseLI	CCNNNNNNNGG	3 cut(s)	425, 664, 1016
BseMII	CTCAG	1 cut(s)	586
BseNI	ACTGG	1 cut(s)	676
BseRI	GAGGAG	2 cut(s)	94, 438
BseXI	GCAGC	5 cut(s)	727, 853, 875, 1079, 1180
BseYI	CCCAGC	1 cut(s)	500
BsgI	GTGCAG	1 cut(s)	417
Bsh1236I	CGCG	1 cut(s)	213
BshFI	GGCC	3 cut(s)	216, 1132, 1208
BsiHKAI	GWGCWC	1 cut(s)	243
BsiHKCI	CYCGRG	1 cut(s)	304
BsiSI	CCGG	1 cut(s)	281
BslI	CCNNNNNNNGG	3 cut(s)	425, 664, 1016
BsmAI	GTCTC	1 cut(s)	152
BsmI	GAATGC	1 cut(s)	1168
BsnI	GGCC	3 cut(s)	216, 1132, 1208
Bso31I	GGTCTC	1 cut(s)	152
BsoBI	CYCGRG	1 cut(s)	304
Bsp1286I	GDGCHC	1 cut(s)	243
Bsp143I	GATC	7 cut(s)	457, 487, 547, 778, 844, 1114, 1141
BspACI	CCGC	2 cut(s)	213, 1209
BspANI	GGCC	3 cut(s)	216, 1132, 1208
BspCNI	CTCAG	1 cut(s)	585
BspFNI	CGCG	1 cut(s)	213
BspLI	GGNNCC	3 cut(s)	417, 768, 1022
BspMAI	CTGCAG	1 cut(s)	1198
BspMI	ACCTGC	1 cut(s)	592
BspPI	GGATC	3 cut(s)	452, 555, 1122
BspTNI	GGTCTC	1 cut(s)	152
BsrI	ACTGG	1 cut(s)	676
BssMI	GATC	7 cut(s)	457, 487, 547, 778, 844, 1114, 1141
Bst2UI	CCWGG	3 cut(s)	249, 420, 1185
Bst4CI	ACNGT	1 cut(s)	323
Bst6I	CTCTTC	2 cut(s)	188, 821
BstBAI	YACGTR	1 cut(s)	1231
BstC8I	GCNNGC	1 cut(s)	523
BstDEI	CTNAG	2 cut(s)	572, 683
BstF5I	GGATG	3 cut(s)	56, 78, 391
BstFNI	CGCG	1 cut(s)	213
BstHHI	GCGC	1 cut(s)	56
BstKTI	GATC	7 cut(s)	460, 490, 550, 781, 847, 1117, 1144
BstMAI	GTCTC	1 cut(s)	152
BstMBI	GATC	7 cut(s)	457, 487, 547, 778, 844, 1114, 1141
BstMWI	GCNNNNNNNGC	1 cut(s)	872
BstNI	CCWGG	3 cut(s)	249, 420, 1185
BstNSI	RCATGY	1 cut(s)	521
BstSCI	CCNGG	4 cut(s)	247, 279, 418, 1183
BstSFI	CTRYAG	2 cut(s)	396, 1194
BstUI	CGCG	1 cut(s)	213
BstV1I	GCAGC	5 cut(s)	727, 853, 875, 1079, 1180
BstX2I	RGATCY	3 cut(s)	547, 778, 1114
BstXI	CCANNNNNNTGG	1 cut(s)	224
BstYI	RGATCY	3 cut(s)	547, 778, 1114
BsuRI	GGCC	3 cut(s)	216, 1132, 1208
BtsCI	GGATG	3 cut(s)	56, 78, 391
BveI	ACCTGC	1 cut(s)	592
Cac8I	GCNNGC	1 cut(s)	523
CaiI	CAGNNNCTG	1 cut(s)	1139
CfoI	GCGC	1 cut(s)	56
Cfr13I	GGNCC	2 cut(s)	416, 879
CseI	GACGC	1 cut(s)	767
CsiI	ACCWGGT	1 cut(s)	247
Csp6I	GTAC	5 cut(s)	319, 510, 627, 854, 1070
CviAII	CATG	9 cut(s)	410, 518, 543, 618, 676, 876, 883, 1099, 1128
CviQI	GTAC	5 cut(s)	319, 510, 627, 854, 1070
DdeI	CTNAG	2 cut(s)	572, 683
DpnI	GATC	7 cut(s)	459, 489, 549, 780, 846, 1116, 1143
DpnII	GATC	7 cut(s)	457, 487, 547, 778, 844, 1114, 1141
EaeI	YGGCCR	3 cut(s)	214, 1130, 1206
Eam1104I	CTCTTC	2 cut(s)	188, 821
EarI	CTCTTC	2 cut(s)	188, 821
Ecl136II	GAGCTC	1 cut(s)	241
Eco24I	GRGCYC	1 cut(s)	243
Eco31I	GGTCTC	1 cut(s)	152
Eco47I	GGWCC	2 cut(s)	416, 879
Eco53kI	GAGCTC	1 cut(s)	241
Eco57I	CTGAAG	4 cut(s)	120, 126, 356, 996
Eco72I	CACGTG	1 cut(s)	1231
Eco88I	CYCGRG	1 cut(s)	304
EcoICRI	GAGCTC	1 cut(s)	241
EcoRI	GAATTC	2 cut(s)	275, 284
EcoRII	CCWGG	3 cut(s)	247, 418, 1183
EcoT38I	GRGCYC	1 cut(s)	243
FaeI	CATG	9 cut(s)	413, 521, 546, 621, 679, 879, 886, 1102, 1131
FatI	CATG	9 cut(s)	409, 517, 542, 617, 675, 875, 882, 1098, 1127
FbaI	TGATCA	2 cut(s)	487, 844
Fnu4HI	GCNGC	7 cut(s)	214, 741, 864, 867, 1093, 1194, 1209
FokI	GGATG	3 cut(s)	43, 65, 378
FriOI	GRGCYC	1 cut(s)	243
Fsp4HI	GCNGC	7 cut(s)	214, 741, 864, 867, 1093, 1194, 1209
FspBI	CTAG	1 cut(s)	870
FspI	TGCGCA	1 cut(s)	55
GlaI	GCGC	1 cut(s)	55
GluI	GCNGC	7 cut(s)	214, 741, 864, 867, 1093, 1194, 1209
GsaI	CCCAGC	1 cut(s)	504
HaeIII	GGCC	3 cut(s)	216, 1132, 1208
HapII	CCGG	1 cut(s)	281
HgaI	GACGC	1 cut(s)	767
HhaI	GCGC	1 cut(s)	56
Hin1II	CATG	9 cut(s)	413, 521, 546, 621, 679, 879, 886, 1102, 1131
Hin6I	GCGC	1 cut(s)	54
HinP1I	GCGC	1 cut(s)	54
HinfI	GANTC	3 cut(s)	263, 474, 1219
HpaII	CCGG	1 cut(s)	281
HphI	GGTGA	1 cut(s)	263
Hpy166II	GTNNAC	3 cut(s)	129, 629, 994
Hpy188I	TCNGA	6 cut(s)	268, 336, 346, 841, 1015, 1224
Hpy188III	TCNNGA	9 cut(s)	375, 461, 593, 755, 776, 788, 848, 931, 1157
Hpy8I	GTNNAC	3 cut(s)	129, 629, 994
HpyAV	CCTTC	4 cut(s)	144, 265, 331, 1020
HpyCH4III	ACNGT	1 cut(s)	323
HpyCH4IV	ACGT	1 cut(s)	1230
HpyCH4V	TGCA	6 cut(s)	434, 641, 863, 968, 1163, 1196
HpyF10VI	GCNNNNNNNGC	1 cut(s)	872
HpyF3I	CTNAG	2 cut(s)	572, 683
HpySE526I	ACGT	1 cut(s)	1230
Hsp92II	CATG	9 cut(s)	413, 521, 546, 621, 679, 879, 886, 1102, 1131
HspAI	GCGC	1 cut(s)	54
Ksp22I	TGATCA	2 cut(s)	487, 844
Kzo9I	GATC	7 cut(s)	457, 487, 547, 778, 844, 1114, 1141
LmnI	GCTCC	2 cut(s)	367, 766
Lsp1109I	GCAGC	5 cut(s)	727, 853, 875, 1079, 1180
LweI	GCATC	5 cut(s)	24, 65, 400, 805, 1150
MabI	ACCWGGT	1 cut(s)	247
MaeI	CTAG	1 cut(s)	870
MaeII	ACGT	1 cut(s)	1230
MaeIII	GTNAC	3 cut(s)	184, 557, 667
MalI	GATC	7 cut(s)	459, 489, 549, 780, 846, 1116, 1143
MboI	GATC	7 cut(s)	457, 487, 547, 778, 844, 1114, 1141
MboII	GAAGA	9 cut(s)	81, 84, 87, 205, 398, 838, 1089, 1109, 1246
MflI	RGATCY	3 cut(s)	547, 778, 1114
MhlI	GDGCHC	1 cut(s)	243
MlsI	TGGCCA	1 cut(s)	1132
MluCI	AATT	8 cut(s)	40, 199, 275, 284, 449, 552, 588, 650
MluNI	TGGCCA	1 cut(s)	1132
Mox20I	TGGCCA	1 cut(s)	1132
MroXI	GAANNNNTTC	1 cut(s)	275
MscI	TGGCCA	1 cut(s)	1132
MseI	TTAA	1 cut(s)	833
Msp20I	TGGCCA	1 cut(s)	1132
MspA1I	CMGCKG	1 cut(s)	866
MspI	CCGG	1 cut(s)	281
MspR9I	CCNGG	4 cut(s)	249, 281, 420, 1185
Mva1269I	GAATGC	1 cut(s)	1168
MvaI	CCWGG	3 cut(s)	249, 420, 1185
MvnI	CGCG	1 cut(s)	213
MwoI	GCNNNNNNNGC	1 cut(s)	872
NciI	CCSGG	1 cut(s)	281
NdeII	GATC	7 cut(s)	457, 487, 547, 778, 844, 1114, 1141
NlaIII	CATG	9 cut(s)	413, 521, 546, 621, 679, 879, 886, 1102, 1131
NlaIV	GGNNCC	3 cut(s)	417, 768, 1022
NmuCI	GTSAC	2 cut(s)	184, 557
NsbI	TGCGCA	1 cut(s)	55
NspI	RCATGY	1 cut(s)	521
PctI	GAATGC	1 cut(s)	1168
PdmI	GAANNNNTTC	1 cut(s)	275
PfeI	GAWTC	3 cut(s)	263, 474, 1219
PfoI	TCCNGGA	2 cut(s)	279, 418
PkrI	GCNGC	7 cut(s)	215, 742, 865, 868, 1094, 1195, 1210
PmaCI	CACGTG	1 cut(s)	1231
PmlI	CACGTG	1 cut(s)	1231
Ppu21I	YACGTR	1 cut(s)	1231
Psp124BI	GAGCTC	1 cut(s)	243
Psp6I	CCWGG	3 cut(s)	247, 418, 1183
PspCI	CACGTG	1 cut(s)	1231
PspFI	CCCAGC	1 cut(s)	500
PspGI	CCWGG	3 cut(s)	247, 418, 1183
PspN4I	GGNNCC	3 cut(s)	417, 768, 1022
PspPI	GGNCC	2 cut(s)	416, 879
PstI	CTGCAG	1 cut(s)	1198
PstNI	CAGNNNCTG	1 cut(s)	1139
PsuI	RGATCY	3 cut(s)	547, 778, 1114
PvuII	CAGCTG	1 cut(s)	866
RsaI	GTAC	5 cut(s)	320, 511, 628, 855, 1071
RsaNI	GTAC	5 cut(s)	319, 510, 627, 854, 1070
SacI	GAGCTC	1 cut(s)	243
SaqAI	TTAA	1 cut(s)	833
SatI	GCNGC	7 cut(s)	214, 741, 864, 867, 1093, 1194, 1209
Sau3AI	GATC	7 cut(s)	457, 487, 547, 778, 844, 1114, 1141
Sau96I	GGNCC	2 cut(s)	416, 879
ScrFI	CCNGG	4 cut(s)	249, 281, 420, 1185
SduI	GDGCHC	1 cut(s)	243
SexAI	ACCWGGT	1 cut(s)	247
SfaNI	GCATC	5 cut(s)	24, 65, 400, 805, 1150
SfcI	CTRYAG	2 cut(s)	396, 1194
SinI	GGWCC	2 cut(s)	416, 879
SmlI	CTYRAG	1 cut(s)	1145
SmoI	CTYRAG	1 cut(s)	1145
Sse9I	AATT	8 cut(s)	40, 199, 275, 284, 449, 552, 588, 650
SsiI	CCGC	2 cut(s)	213, 1209
SspMI	CTAG	1 cut(s)	870
SstI	GAGCTC	1 cut(s)	243
StyD4I	CCNGG	4 cut(s)	247, 279, 418, 1183
TaaI	ACNGT	1 cut(s)	323
TaiI	ACGT	1 cut(s)	1233
TaqI	TCGA	2 cut(s)	775, 813
TasI	AATT	8 cut(s)	40, 199, 275, 284, 449, 552, 588, 650
TatI	WGTACW	2 cut(s)	626, 853
TauI	GCSGC	2 cut(s)	216, 1211
TfiI	GAWTC	3 cut(s)	263, 474, 1219
Tru1I	TTAA	1 cut(s)	833
Tru9I	TTAA	1 cut(s)	833
TseFI	GTSAC	2 cut(s)	184, 557
TseI	GCWGC	5 cut(s)	740, 863, 866, 1092, 1193
Tsp45I	GTSAC	2 cut(s)	184, 557
TspDTI	ATGAA	5 cut(s)	341, 398, 945, 1109, 1194
TspGWI	ACGGA	1 cut(s)	55
VpaK11BI	GGWCC	2 cut(s)	416, 879
XapI	RAATTY	5 cut(s)	199, 275, 284, 449, 588
XceI	RCATGY	1 cut(s)	521
XmnI	GAANNNNTTC	1 cut(s)	275
XspI	CTAG	1 cut(s)	870

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.