Prupe.8G177900_v2.0.a1

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
17935514 .. 17939299
3786 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G177900.1

Sequence Viewer

Length: 1344 bp
ATGGGTTCAAAGGAGAACAACCCAGGTCTCGTTGGGTCCTCAAATTTCCAAGGTCCAAGATTGGTGGGTACCAAGTTTGTGAAGGAGGTGGGGCCGATTCGTCGTCAGGCATTGAGAGATGTCCAAAACATCACCAGAGCTAACGTCAACCCTTGTGTTGTCAACAAAAGAGAATGTGCTGGGAAAGATGCGGCATGTAATAAAAATGTGGCAAATCTGCCACATAGACCAATTACAAGGAGGTTTGCAGCACAAATGGTCCAGCAGTGCCCAAAGGAAACCAAGGAAGTGACTGTGACTTCATTGGTTGCGAATCCGAGTGGTGTGGGGGAACATGATCTGGAAACTAAGAAACTGAGCTCATCTACTGCCAATTCTAGTTGTCTGGTGGACTGTGAAATTGTAGATGTGGAGGATAATGAGGATGAGGCTTGTGATGCTCCTGTGCCAATGTTTGTGAAGCACACAGAAGCCATGCTAGATGAAATTGATAGGATGGAAGAGGATGAAGATGTAGAGGAACCTGTTATGGATATTGACAGCTGCGGCTCGAAGGATCCACTTAATGTTGTTGAGTACATAGATGACATCTACGCTCACTACAGGAAAACTGAGAAGTCAAGCTGTATCTCCCCTATTTACATGGCTCACCAACCTGACATCAATGAGAAAATGAGGGCGATTCTCATCGACTGGCTTATTGAGGTCCACTACAAGTTTGAGCTTATGGATGAGACATTATTCCTTACTGTCAATCTTATAGACAGATTCTTAGAGAGCCAAATGGTGATCAGAAAGAAGCTTCAATTGGTTGGTGTGACAGCCATGTTACTAGCATGCAAGTATGAAGAGGTTTCTGTCCCAATTGTGGAAGATTTTGTTCTTATATCAGATAAGGCATATTCAAGGAAAGATGTCCTTGATATGGAGAAATCAATGGTGAACAGTTTACAATTCAACTTTTCTGTTCCTACTCCATTTGTGTTCATGAAGAGATTCCTCAAGGCAGCTCAATCCGACAAAAAGATTGAGCTTCTGTCCTTCTTCCTCATTGAGCTGTGCCTGGTGGAGTATGAAATGCTCAGGTTCCCCCCATCTAAGCTAGCTGCTGCTGCAATTTACACTGCTCAGTGTAGTCTGTCCCGGTTCAAGCAATGGAGCAAGACCAGCGAGTGGTATACTAATTACTCAGAAGATGAGCTCCTAGAATGCTCAAGGATGATGGTTACTTTCCATCAGAAGGCTGAAACTGGGAAACTTACTGGAGTACACAGGAAGTACAGTACATGGAAATTTGGCTATGCAGCTAAAGCTCAACCAGCTGCATTCCTCCTGGATCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

448

Amino Acids

50.78

Weight (kDa)

5.35

Isoelectric Point (pI)

47.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 68
AccB1I GGYRCC 1 cut(s) 68
AccB7I CCANNNNNTGG 1 cut(s) 1173
AccI GTMKAC 1 cut(s) 1178
AciI CCGC 2 cut(s) 191, 546
AclWI GGATC 2 cut(s) 551, 564
AcsI RAATTY 2 cut(s) 43, 1292
AfaI GTAC 5 cut(s) 70, 578, 1269, 1280, 1285
AfiI CCNNNNNNNGG 4 cut(s) 868, 925, 1173, 1240
AgsI TTSAA 5 cut(s) 9, 806, 906, 958, 1150
AjnI CCWGG 3 cut(s) 22, 1062, 1332
AjuI GAANNNNNNNTTGG 2 cut(s) 791, 823
Alw21I GWGCWC 2 cut(s) 362, 1203
Alw26I GTCTC 2 cut(s) 32, 728
AlwI GGATC 2 cut(s) 551, 564
AoxI GGCC 1 cut(s) 92
ApeKI GCWGC 8 cut(s) 248, 543, 1007, 1106, 1109, 1112, 1304, 1322
ApoI RAATTY 2 cut(s) 43, 1292
Asp700I GAANNNNTTC 1 cut(s) 995
Asp718I GGTACC 1 cut(s) 68
AspS9I GGNCC 5 cut(s) 36, 53, 92, 259, 706
AsuC2I CCSGG 1 cut(s) 1144
AsuHPI GGTGA 4 cut(s) 124, 641, 799, 952
AsuNHI GCTAGC 1 cut(s) 1102
AvaII GGWCC 4 cut(s) 36, 53, 259, 706
BaeGI GKGCMC 1 cut(s) 272
BamHI GGATCC 1 cut(s) 556
BanI GGYRCC 1 cut(s) 68
BanII GRGCYC 2 cut(s) 362, 1203
Bbv12I GWGCWC 2 cut(s) 362, 1203
BbvI GCAGC 8 cut(s) 260, 530, 1019, 1093, 1096, 1099, 1309, 1316
BccI CCATC 4 cut(s) 490, 1102, 1216, 1242
BciT130I CCWGG 3 cut(s) 24, 1064, 1334
BclI TGATCA 1 cut(s) 789
BcnI CCSGG 1 cut(s) 1144
BcoDI GTCTC 2 cut(s) 32, 728
BfaI CTAG 5 cut(s) 378, 479, 833, 1103, 1205
BfmI CTRYAG 1 cut(s) 601
Bme1390I CCNGG 4 cut(s) 24, 1064, 1144, 1334
Bme18I GGWCC 4 cut(s) 36, 53, 259, 706
BmgT120I GGNCC 5 cut(s) 36, 53, 92, 259, 706
BmiI GGNNCC 6 cut(s) 37, 70, 93, 522, 558, 1088
BmrFI CCNGG 4 cut(s) 24, 1064, 1144, 1334
BmrI ACTGGG 1 cut(s) 1260
BmsI GCATC 2 cut(s) 178, 427
BmtI GCTAGC 1 cut(s) 1106
BmuI ACTGGG 1 cut(s) 1260
BpmI CTGGAG 1 cut(s) 1284
Bpu10I CCTNAGC 1 cut(s) 1082
BpuEI CTTGAG 2 cut(s) 986, 1198
BpuMI CCSGG 1 cut(s) 1144
BsaBI GATNNNNATC 1 cut(s) 686
BsaI GGTCTC 1 cut(s) 32
BsaJI CCNNGG 3 cut(s) 22, 49, 282
Bsc4I CCNNNNNNNGG 4 cut(s) 868, 925, 1173, 1240
Bse1I ACTGG 3 cut(s) 698, 1255, 1267
Bse3DI GCAATG 1 cut(s) 1160
Bse8I GATNNNNATC 1 cut(s) 686
BseBI CCWGG 3 cut(s) 24, 1064, 1334
BseDI CCNNGG 3 cut(s) 22, 49, 282
BseGI GGATG 5 cut(s) 430, 501, 511, 736, 1224
BseJI GATNNNNATC 1 cut(s) 686
BseLI CCNNNNNNNGG 4 cut(s) 868, 925, 1173, 1240
BseMI GCAATG 1 cut(s) 1160
BseMII CTCAG 5 cut(s) 347, 603, 1096, 1142, 1203
BseNI ACTGG 3 cut(s) 698, 1255, 1267
BseSI GKGCMC 1 cut(s) 272
BseXI GCAGC 8 cut(s) 260, 530, 1019, 1093, 1096, 1099, 1309, 1316
BseYI CCCAGC 1 cut(s) 179
BshFI GGCC 1 cut(s) 94
BshNI GGYRCC 1 cut(s) 68
BsiHKAI GWGCWC 2 cut(s) 362, 1203
BsiSI CCGG 1 cut(s) 1144
BslFI GGGAC 2 cut(s) 845, 1126
BslI CCNNNNNNNGG 4 cut(s) 868, 925, 1173, 1240
BsmAI GTCTC 2 cut(s) 32, 728
BsmFI GGGAC 2 cut(s) 845, 1126
BsmI GAATGC 2 cut(s) 1214, 1325
BsnI GGCC 1 cut(s) 94
Bso31I GGTCTC 1 cut(s) 32
Bsp1286I GDGCHC 3 cut(s) 272, 362, 1203
Bsp143I GATC 4 cut(s) 337, 556, 789, 1336
BspACI CCGC 2 cut(s) 191, 546
BspANI GGCC 1 cut(s) 94
BspCNI CTCAG 5 cut(s) 348, 604, 1095, 1141, 1202
BspHI TCATGA 1 cut(s) 987
BspLI GGNNCC 6 cut(s) 37, 70, 93, 522, 558, 1088
BspOI GCTAGC 1 cut(s) 1106
BspPI GGATC 2 cut(s) 551, 564
BspT107I GGYRCC 1 cut(s) 68
BspTNI GGTCTC 1 cut(s) 32
BsrDI GCAATG 1 cut(s) 1160
BsrI ACTGG 3 cut(s) 698, 1255, 1267
BssECI CCNNGG 3 cut(s) 22, 49, 282
BssMI GATC 4 cut(s) 337, 556, 789, 1336
BssNAI GTATAC 1 cut(s) 1179
BssT1I CCWWGG 2 cut(s) 49, 282
Bst1107I GTATAC 1 cut(s) 1179
Bst2UI CCWGG 3 cut(s) 24, 1064, 1334
Bst4CI ACNGT 5 cut(s) 295, 395, 751, 947, 1283
Bst6I CTCTTC 3 cut(s) 495, 843, 986
BstC8I GCNNGC 2 cut(s) 838, 1104
BstDEI CTNAG 8 cut(s) 348, 356, 612, 772, 1082, 1098, 1128, 1189
BstF5I GGATG 5 cut(s) 430, 501, 511, 736, 1224
BstKTI GATC 4 cut(s) 340, 559, 792, 1339
BstMAI GTCTC 2 cut(s) 32, 728
BstMBI GATC 4 cut(s) 337, 556, 789, 1336
BstMWI GCNNNNNNNGC 5 cut(s) 437, 1112, 1167, 1310, 1319
BstNI CCWGG 3 cut(s) 24, 1064, 1334
BstNSI RCATGY 2 cut(s) 198, 840
BstSCI CCNGG 4 cut(s) 22, 1062, 1142, 1332
BstSFI CTRYAG 1 cut(s) 601
BstSLI GKGCMC 1 cut(s) 272
BstV1I GCAGC 8 cut(s) 260, 530, 1019, 1093, 1096, 1099, 1309, 1316
BstX2I RGATCY 2 cut(s) 556, 1336
BstYI RGATCY 2 cut(s) 556, 1336
BstZ17I GTATAC 1 cut(s) 1179
BsuRI GGCC 1 cut(s) 94
BtsCI GGATG 5 cut(s) 430, 501, 511, 736, 1224
BtsI GCAGTG 2 cut(s) 272, 1122
BtsIMutI CAGTG 3 cut(s) 272, 1122, 1136
Cac8I GCNNGC 2 cut(s) 838, 1104
CciI TCATGA 1 cut(s) 987
Cfr13I GGNCC 5 cut(s) 36, 53, 92, 259, 706
Csp6I GTAC 5 cut(s) 69, 577, 1268, 1279, 1284
CspCI CAANNNNNGTGG 2 cut(s) 45, 80
CviAII CATG 8 cut(s) 195, 335, 475, 643, 826, 837, 988, 1287
CviQI GTAC 5 cut(s) 69, 577, 1268, 1279, 1284
DdeI CTNAG 8 cut(s) 348, 356, 612, 772, 1082, 1098, 1128, 1189
DpnI GATC 4 cut(s) 339, 558, 791, 1338
DpnII GATC 4 cut(s) 337, 556, 789, 1336
Eam1104I CTCTTC 3 cut(s) 495, 843, 986
EarI CTCTTC 3 cut(s) 495, 843, 986
Ecl136II GAGCTC 2 cut(s) 360, 1201
Eco130I CCWWGG 2 cut(s) 49, 282
Eco24I GRGCYC 2 cut(s) 362, 1203
Eco31I GGTCTC 1 cut(s) 32
Eco47I GGWCC 4 cut(s) 36, 53, 259, 706
Eco53kI GAGCTC 2 cut(s) 360, 1201
EcoICRI GAGCTC 2 cut(s) 360, 1201
EcoO109I RGGNCCY 1 cut(s) 36
EcoRII CCWGG 3 cut(s) 22, 1062, 1332
EcoT14I CCWWGG 2 cut(s) 49, 282
EcoT38I GRGCYC 2 cut(s) 362, 1203
ErhI CCWWGG 2 cut(s) 49, 282
FaeI CATG 8 cut(s) 198, 338, 478, 646, 829, 840, 991, 1290
FalI AAGNNNNNCTT 2 cut(s) 903, 935
FaqI GGGAC 2 cut(s) 845, 1126
FatI CATG 8 cut(s) 194, 334, 474, 642, 825, 836, 987, 1286
FbaI TGATCA 1 cut(s) 789
FblI GTMKAC 1 cut(s) 1178
FokI GGATG 5 cut(s) 437, 508, 518, 743, 1231
FriOI GRGCYC 2 cut(s) 362, 1203
FspBI CTAG 5 cut(s) 378, 479, 833, 1103, 1205
GsaI CCCAGC 1 cut(s) 183
GsuI CTGGAG 1 cut(s) 1284
HaeIII GGCC 1 cut(s) 94
HapII CCGG 1 cut(s) 1144
Hin1II CATG 8 cut(s) 198, 338, 478, 646, 829, 840, 991, 1290
HincII GTYRAC 2 cut(s) 148, 163
HindII GTYRAC 2 cut(s) 148, 163
HindIII AAGCTT 1 cut(s) 800
HinfI GANTC 5 cut(s) 97, 313, 682, 768, 996
HpaII CCGG 1 cut(s) 1144
HphI GGTGA 4 cut(s) 124, 641, 799, 952
Hpy166II GTNNAC 8 cut(s) 148, 163, 391, 709, 943, 950, 1179, 1270
Hpy188I TCNGA 6 cut(s) 318, 794, 892, 1018, 1192, 1239
Hpy188III TCNNGA 2 cut(s) 341, 988
Hpy8I GTNNAC 8 cut(s) 148, 163, 391, 709, 943, 950, 1179, 1270
Hpy99I CGWCG 1 cut(s) 105
HpyAV CCTTC 4 cut(s) 76, 547, 1051, 1234
HpyCH4III ACNGT 5 cut(s) 295, 395, 751, 947, 1283
HpyCH4IV ACGT 1 cut(s) 144
HpyCH4V TGCA 5 cut(s) 248, 840, 1115, 1304, 1325
HpyF10VI GCNNNNNNNGC 5 cut(s) 437, 1112, 1167, 1310, 1319
HpyF3I CTNAG 8 cut(s) 348, 356, 612, 772, 1082, 1098, 1128, 1189
HpySE526I ACGT 1 cut(s) 144
Hsp92II CATG 8 cut(s) 198, 338, 478, 646, 829, 840, 991, 1290
KpnI GGTACC 1 cut(s) 72
Ksp22I TGATCA 1 cut(s) 789
Kzo9I GATC 4 cut(s) 337, 556, 789, 1336
LmnI GCTCC 3 cut(s) 445, 1158, 1206
Lsp1109I GCAGC 8 cut(s) 260, 530, 1019, 1093, 1096, 1099, 1309, 1316
LweI GCATC 2 cut(s) 178, 427
MaeI CTAG 5 cut(s) 378, 479, 833, 1103, 1205
MaeII ACGT 1 cut(s) 144
MaeIII GTNAC 5 cut(s) 289, 295, 817, 828, 1225
MalI GATC 4 cut(s) 339, 558, 791, 1338
MboI GATC 4 cut(s) 337, 556, 789, 1336
MboII GAAGA 7 cut(s) 512, 521, 860, 884, 1003, 1036, 1205
MfeI CAATTG 2 cut(s) 806, 864
MflI RGATCY 2 cut(s) 556, 1336
MhlI GDGCHC 3 cut(s) 272, 362, 1203
MmeI TCCRAC 1 cut(s) 1041
MroXI GAANNNNTTC 1 cut(s) 995
MseI TTAA 1 cut(s) 564
MspA1I CMGCKG 2 cut(s) 543, 1322
MspI CCGG 1 cut(s) 1144
MspR9I CCNGG 4 cut(s) 24, 1064, 1144, 1334
MunI CAATTG 2 cut(s) 806, 864
Mva1269I GAATGC 2 cut(s) 1214, 1325
MvaI CCWGG 3 cut(s) 24, 1064, 1334
MwoI GCNNNNNNNGC 5 cut(s) 437, 1112, 1167, 1310, 1319
NciI CCSGG 1 cut(s) 1144
NdeII GATC 4 cut(s) 337, 556, 789, 1336
NheI GCTAGC 1 cut(s) 1102
NlaIII CATG 8 cut(s) 198, 338, 478, 646, 829, 840, 991, 1290
NlaIV GGNNCC 6 cut(s) 37, 70, 93, 522, 558, 1088
NmuCI GTSAC 3 cut(s) 289, 295, 817
NspI RCATGY 2 cut(s) 198, 840
PaeI GCATGC 1 cut(s) 840
PagI TCATGA 1 cut(s) 987
PctI GAATGC 2 cut(s) 1214, 1325
PdmI GAANNNNTTC 1 cut(s) 995
PfeI GAWTC 5 cut(s) 97, 313, 682, 768, 996
PflMI CCANNNNNTGG 1 cut(s) 1173
PfoI TCCNGGA 1 cut(s) 1332
PpuMI RGGWCCY 1 cut(s) 36
Psp124BI GAGCTC 2 cut(s) 362, 1203
Psp5II RGGWCCY 1 cut(s) 36
Psp6I CCWGG 3 cut(s) 22, 1062, 1332
PspFI CCCAGC 1 cut(s) 179
PspGI CCWGG 3 cut(s) 22, 1062, 1332
PspN4I GGNNCC 6 cut(s) 37, 70, 93, 522, 558, 1088
PspPI GGNCC 5 cut(s) 36, 53, 92, 259, 706
PspPPI RGGWCCY 1 cut(s) 36
PsuI RGATCY 2 cut(s) 556, 1336
PvuII CAGCTG 2 cut(s) 543, 1322
RsaI GTAC 5 cut(s) 70, 578, 1269, 1280, 1285
RsaNI GTAC 5 cut(s) 69, 577, 1268, 1279, 1284
SacI GAGCTC 2 cut(s) 362, 1203
SaqAI TTAA 1 cut(s) 564
Sau3AI GATC 4 cut(s) 337, 556, 789, 1336
Sau96I GGNCC 5 cut(s) 36, 53, 92, 259, 706
ScrFI CCNGG 4 cut(s) 24, 1064, 1144, 1334
SduI GDGCHC 3 cut(s) 272, 362, 1203
SfaNI GCATC 2 cut(s) 178, 427
SfcI CTRYAG 1 cut(s) 601
SinI GGWCC 4 cut(s) 36, 53, 259, 706
SmlI CTYRAG 2 cut(s) 1001, 1213
SmoI CTYRAG 2 cut(s) 1001, 1213
SphI GCATGC 1 cut(s) 840
SsiI CCGC 2 cut(s) 191, 546
SspMI CTAG 5 cut(s) 378, 479, 833, 1103, 1205
SstI GAGCTC 2 cut(s) 362, 1203
StyD4I CCNGG 4 cut(s) 22, 1062, 1142, 1332
StyI CCWWGG 2 cut(s) 49, 282
TaaI ACNGT 5 cut(s) 295, 395, 751, 947, 1283
TaiI ACGT 1 cut(s) 147
TaqI TCGA 2 cut(s) 551, 690
TatI WGTACW 4 cut(s) 576, 1267, 1278, 1283
TauI GCSGC 2 cut(s) 194, 549
TfiI GAWTC 5 cut(s) 97, 313, 682, 768, 996
Tru1I TTAA 1 cut(s) 564
Tru9I TTAA 1 cut(s) 564
TscAI CASTG 3 cut(s) 272, 1129, 1136
TseFI GTSAC 3 cut(s) 289, 295, 817
TseI GCWGC 8 cut(s) 248, 543, 1007, 1106, 1109, 1112, 1304, 1322
Tsp45I GTSAC 3 cut(s) 289, 295, 817
TspDTI ATGAA 7 cut(s) 291, 498, 522, 861, 976, 1004, 1089
TspRI CASTG 3 cut(s) 272, 1129, 1136
Van91I CCANNNNNTGG 1 cut(s) 1173
VpaK11BI GGWCC 4 cut(s) 36, 53, 259, 706
XapI RAATTY 2 cut(s) 43, 1292
XceI RCATGY 2 cut(s) 198, 840
XmiI GTMKAC 1 cut(s) 1178
XmnI GAANNNNTTC 1 cut(s) 995
XspI CTAG 5 cut(s) 378, 479, 833, 1103, 1205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.