Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0009019

Physical Location & Seq

Genomic Coordinates Reverse (-)

18875735 .. 18881653

Gene Structure 5919 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0133400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGTCGGGCCCACTCGATCGGTTCGCTAGGCCATGTTTTGAAGGGTTTTATGGTAGTGATGAGAGAAGAGAAAGGAAGTCTGATTTTGAGAACTCCGAGGATGAGCGGAGGACTAGAATCGGGACTCTGAAGAAGAAGGCCATAAATGCGTCTACTAAATTTAAGCATTCTCTCAAGAAAAAGGGTAGTAGAAGAAAAAGTGATGGCAGAGTCAGCTCTGTTTCTATTGAAGATGTTCGCGATGTTGAAGAGCTACAGGCTGTTGATGCATTTCGACAATCACTAATTTTGGATGAATTGCTGCCGGACAGACACGATGACTATCATATGATGTTGAGGTTCTTGAAAGCAAGGAAATTCGATCTTGAAAAAGCAAAGCATATGTGGGCTGATATGCTTCAATGGAGAAAGGAGTTCGGTTCCGACACTATTATGGAGGATTTTGAGTTCAAAGAATTGGATGATGTTCTTAACTATTATCCTCATGGGCATCATGGTGTGGATAAGGAGGGAAGACCAGTTTATATTGAAAGGTTAGGGAAAGTAGATCCCAACAAACTAATGCAAGTTACCACTATGGATCGCTATGTGAAATACCATGTGCAGGAGTTTGAGAAAAGCTTTGCAATAAAGTTTCCAGCTTGTACTATTGCTGCAAAGAGGCACATAGATTCAAGCACTACAATCTTAGATGTTCAAGGCGTGGGCTTCAAGAACTTTACAAAGTCTGCACGAGAACTAATTATGCGGTTGCAGAAGGTGGATGGTGATAACTATCCTGAGACCCTCTGTCAAATGTTCATCATTAATGCTGGTCCTGGGTTTAGGCTTCTGTGGAACACTGTGAAGACTTTTCTTGATCCTAAAACAACATCAAAGATTCATGTTCTTGGAAACAAATACCAAAGCAAATTGCTTGAGATAATTGATGCCAGTGAGTTGCCAGAATTTCTGGGTGGAAGCTGTACCTGTGCAGATCAGGGAGGTTGCCTTCGCTCTGATAAGGGGCCCTGGAAAAACCCTGACATCTTGAAGATGGTTCTTAGTGGTGAAGCACGGCGTGCAAGGCAGGTTGTTAAAGTTCTAAACAGTGAGGGGAAATTTCTTGCTTATGCTAAGCCACACTACCCAATGGTAAAGGGTAGCGATACATCGACTGCTGAGTCGGGATCTGAAGCGGAGGATATTGCATCCCCGAAAGCTTTGAAGAGTTATTCACATCTTCGATTGACTCCTGTTCGAGAAGAGGCTAAGGTCGTAGGCAAGGCAAGCTGTGCAGGAAGCTTCTCAGGTTATGATGAATATGTTCCTATGGTTGACAAAGCTGTTGATGCTGGTTGGAAAAAGCAAGCTTCCCTGCAGAAATCTCATTCTCCCAAAGGAACACTTCCAGTACCTAACATCCCAAAAGATCCAGAAGGAATTCGAGCTCGGATTTTGGTAGCGGTTATGGCCTTCTTCCTGACTTTTCTCACACTCTTACGCTCAGTTGCTTCCCACGTATGTGGGAAGCATCCTGACACATTGGCTAATAAAGAACAAAATGTTACTGAACCAACTTTTGATGCAACAAACAAGGAAGAGTGCAGTCCTCCTTCACCAAAACTGCAAAGGGTAGATCTTCTTCCCACTGTACTGAAGAAACTGGCTGAGCTTGAGGAGAAGGTTGATACGCTCCAATCTAAACCATCTGAGATGCCTTATGAGAAGGAGGAATTGCTGAATGCTGCTGTTTGTCGTGTGGATGCCTTGGAAGCAGAATTAATTGCTACTAAAAAGGCTCTCCATGAAGCTTTAATGAGGCAAGAAGAGTTGCTGGCTTATATAGACAGGCAAGAAGAAGCCAAATTCCGGAAAAAGAAGTTTTGCTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cyclin_C Cyclin_N

Protein Analysis

624

Amino Acids

70.84

Weight (kDa)

8.67

Isoelectric Point (pI)

46.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO_N	PF03765	105 - 131	2e-06	CRAL/TRIO, N-terminal domain
CRAL_TRIO	PF00650	159 - 320	6.9e-30	CRAL/TRIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009019)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20610 AT1G76310 AT1G76310 AT1G76310 AT1G76310
fragaria_vesca	FvH4_2g16590
malus_domestica	MD05G1134100.v1.1 MD10G1139200.v1.1
prunus_persica	Prupe.8G177900_v2.0.a1
pyrus_communis	pycom05g13080 pycom10g11830
rosa_chinensis	RchiOBHm_Chr6g0280651
rosa_laevigata	RLG00000013039
rosa_multiflora	Rmu_co8479241.1_g000001 Rmu_sc0000976.1_g000005
rosa_roxburghii	Rroxscaffold_7G00187790
rosa_rugosa	Rorug06G0133400 Rorug06G0133400
rosa_samantha	Rh6AG246000 Rh6BG248300 Rh6CG249600
rosa_wichuraiana	Rw6G021290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1162
Acc36I	ACCTGC	1 cut(s)	1060
AccBSI	CCGCTC	1 cut(s)	106
AccI	GTMKAC	1 cut(s)	152
AccII	CGCG	1 cut(s)	240
AccIII	TCCGGA	1 cut(s)	1851
AciI	CCGC	4 cut(s)	106, 748, 1178, 1445
AclWI	GGATC	5 cut(s)	542, 588, 854, 1177, 1406
AcsI	RAATTY	6 cut(s)	158, 356, 947, 1100, 1422, 1847
AcuI	CTGAAG	3 cut(s)	149, 1194, 1658
AdeI	CACNNNGTG	1 cut(s)	1061
AfaI	GTAC	4 cut(s)	646, 967, 1395, 1635
AfiI	CCNNNNNNNGG	2 cut(s)	604, 1851
AhdI	GACNNNNNGTC	1 cut(s)	789
AjnI	CCWGG	2 cut(s)	817, 1010
AleI	CACNNNNGTG	1 cut(s)	1503
AloI	GAACNNNNNNTCC	2 cut(s)	431, 463
Alw21I	GWGCWC	1 cut(s)	1432
Alw26I	GTCTC	1 cut(s)	776
AlwI	GGATC	5 cut(s)	542, 588, 854, 1177, 1406
Aor13HI	TCCGGA	1 cut(s)	1851
AoxI	GGCC	5 cut(s)	7, 29, 138, 1007, 1452
ApaI	GGGCCC	2 cut(s)	11, 1011
ApeKI	GCWGC	3 cut(s)	301, 653, 1727
ApoI	RAATTY	6 cut(s)	158, 356, 947, 1100, 1422, 1847
AseI	ATTAAT	2 cut(s)	807, 1763
Asp700I	GAANNNNTTC	3 cut(s)	234, 1305, 1422
AspS9I	GGNCC	5 cut(s)	7, 8, 815, 1007, 1008
AsuHPI	GGTGA	3 cut(s)	779, 1061, 1590
AvaII	GGWCC	1 cut(s)	815
BaeGI	GKGCMC	2 cut(s)	11, 1011
BanII	GRGCYC	3 cut(s)	11, 1011, 1432
BarI	GAAGNNNNNNTAC	2 cut(s)	1608, 1640
BauI	CACGAG	1 cut(s)	732
BbsI	GAAGAC	2 cut(s)	520, 854
Bbv12I	GWGCWC	1 cut(s)	1432
BbvI	GCAGC	3 cut(s)	288, 640, 1714
BccI	CCATC	4 cut(s)	197, 758, 1030, 1696
BceAI	ACGGC	1 cut(s)	1073
BciT130I	CCWGG	2 cut(s)	819, 1012
BcoDI	GTCTC	1 cut(s)	776
BfaI	CTAG	2 cut(s)	27, 114
BfmI	CTRYAG	2 cut(s)	254, 1358
BfuAI	ACCTGC	1 cut(s)	1060
BglII	AGATCT	1 cut(s)	1618
BisI	GCNGC	3 cut(s)	302, 654, 1728
BlpI	GCTNAGC	2 cut(s)	1116, 1650
BlsI	GCNGC	3 cut(s)	303, 655, 1729
Bme1390I	CCNGG	2 cut(s)	819, 1012
Bme18I	GGWCC	1 cut(s)	815
BmeRI	GACNNNNNGTC	1 cut(s)	789
BmgT120I	GGNCC	5 cut(s)	7, 8, 815, 1007, 1008
BmiI	GGNNCC	4 cut(s)	9, 421, 1008, 1009
BmrFI	CCNGG	2 cut(s)	819, 1012
BmsI	GCATC	9 cut(s)	256, 499, 919, 1199, 1321, 1522, 1555, 1686, 1735
BpiI	GAAGAC	2 cut(s)	520, 854
Bpu10I	CCTNAGC	1 cut(s)	1251
Bpu1102I	GCTNAGC	2 cut(s)	1116, 1650
BpuEI	CTTGAG	3 cut(s)	158, 938, 1676
BsaAI	YACGTR	1 cut(s)	1501
BsaBI	GATNNNNATC	2 cut(s)	321, 774
BsaI	GGTCTC	1 cut(s)	776
BsaJI	CCNNGG	4 cut(s)	96, 818, 1010, 1749
BsaWI	WCCGGW	1 cut(s)	1851
Bsc4I	CCNNNNNNNGG	2 cut(s)	604, 1851
Bse1I	ACTGG	4 cut(s)	518, 933, 1391, 1650
Bse8I	GATNNNNATC	2 cut(s)	321, 774
BseAI	TCCGGA	1 cut(s)	1851
BseBI	CCWGG	2 cut(s)	819, 1012
BseDI	CCNNGG	4 cut(s)	96, 818, 1010, 1749
BseGI	GGATG	8 cut(s)	106, 298, 466, 769, 1190, 1401, 1513, 1750
BseJI	GATNNNNATC	2 cut(s)	321, 774
BseLI	CCNNNNNNNGG	2 cut(s)	604, 1851
BseMII	CTCAG	6 cut(s)	771, 1152, 1302, 1500, 1641, 1683
BseNI	ACTGG	4 cut(s)	518, 933, 1391, 1650
BseRI	GAGGAG	1 cut(s)	1673
BseSI	GKGCMC	2 cut(s)	11, 1011
BseXI	GCAGC	3 cut(s)	288, 640, 1714
BsgI	GTGCAG	5 cut(s)	623, 714, 993, 1296, 1606
Bsh1236I	CGCG	1 cut(s)	240
Bsh1285I	CGRYCG	1 cut(s)	19
BshFI	GGCC	5 cut(s)	9, 31, 140, 1009, 1454
BsiEI	CGRYCG	1 cut(s)	19
BsiHKAI	GWGCWC	1 cut(s)	1432
BsiSI	CCGG	2 cut(s)	305, 1852
BslFI	GGGAC	1 cut(s)	136
BslI	CCNNNNNNNGG	2 cut(s)	604, 1851
BsmAI	GTCTC	1 cut(s)	776
BsmFI	GGGAC	1 cut(s)	136
BsmI	GAATGC	2 cut(s)	166, 1729
BsnI	GGCC	5 cut(s)	9, 31, 140, 1009, 1454
Bso31I	GGTCTC	1 cut(s)	776
Bsp120I	GGGCCC	2 cut(s)	7, 1007
Bsp1286I	GDGCHC	3 cut(s)	11, 1011, 1432
Bsp13I	TCCGGA	1 cut(s)	1851
Bsp143I	GATC	9 cut(s)	16, 361, 547, 580, 859, 976, 1169, 1411, 1618
Bsp1720I	GCTNAGC	2 cut(s)	1116, 1650
Bsp68I	TCGCGA	1 cut(s)	240
BspACI	CCGC	4 cut(s)	106, 748, 1178, 1445
BspANI	GGCC	5 cut(s)	9, 31, 140, 1009, 1454
BspCNI	CTCAG	6 cut(s)	772, 1153, 1301, 1499, 1642, 1684
BspEI	TCCGGA	1 cut(s)	1851
BspFNI	CGCG	1 cut(s)	240
BspLI	GGNNCC	4 cut(s)	9, 421, 1008, 1009
BspMAI	CTGCAG	1 cut(s)	1362
BspMI	ACCTGC	1 cut(s)	1060
BspPI	GGATC	5 cut(s)	542, 588, 854, 1177, 1406
BspQI	GCTCTTC	1 cut(s)	243
BspTNI	GGTCTC	1 cut(s)	776
BsrBI	CCGCTC	1 cut(s)	106
BsrI	ACTGG	4 cut(s)	518, 933, 1391, 1650
BssECI	CCNNGG	4 cut(s)	96, 818, 1010, 1749
BssMI	GATC	9 cut(s)	16, 361, 547, 580, 859, 976, 1169, 1411, 1618
BssSI	CACGAG	1 cut(s)	732
BssT1I	CCWWGG	1 cut(s)	1749
Bst2BI	CACGAG	1 cut(s)	732
Bst2UI	CCWGG	2 cut(s)	819, 1012
Bst4CI	ACNGT	3 cut(s)	844, 1091, 1633
Bst6I	CTCTTC	6 cut(s)	61, 243, 1202, 1239, 1575, 1803
BstAPI	GCANNNNNTGC	2 cut(s)	1061, 1274
BstBAI	YACGTR	1 cut(s)	1501
BstC8I	GCNNGC	4 cut(s)	1062, 1270, 1350, 1818
BstF5I	GGATG	8 cut(s)	106, 298, 466, 769, 1190, 1401, 1513, 1750
BstFNI	CGCG	1 cut(s)	240
BstKTI	GATC	9 cut(s)	19, 364, 550, 583, 862, 979, 1172, 1414, 1621
BstMAI	GTCTC	1 cut(s)	776
BstMBI	GATC	9 cut(s)	16, 361, 547, 580, 859, 976, 1169, 1411, 1618
BstMCI	CGRYCG	1 cut(s)	19
BstNI	CCWGG	2 cut(s)	819, 1012
BstSCI	CCNGG	2 cut(s)	817, 1010
BstSFI	CTRYAG	2 cut(s)	254, 1358
BstSLI	GKGCMC	2 cut(s)	11, 1011
BstUI	CGCG	1 cut(s)	240
BstV1I	GCAGC	3 cut(s)	288, 640, 1714
BstV2I	GAAGAC	2 cut(s)	520, 854
BstX2I	RGATCY	4 cut(s)	547, 1169, 1411, 1618
BstXI	CCANNNNNNTGG	1 cut(s)	1505
BstYI	RGATCY	4 cut(s)	547, 1169, 1411, 1618
BsuRI	GGCC	5 cut(s)	9, 31, 140, 1009, 1454
BtgZI	GCGATG	1 cut(s)	255
BtsCI	GGATG	8 cut(s)	106, 298, 466, 769, 1190, 1401, 1513, 1750
BtsIMutI	CAGTG	4 cut(s)	840, 940, 1096, 1629
BtuMI	TCGCGA	1 cut(s)	240
BveI	ACCTGC	1 cut(s)	1060
Cac8I	GCNNGC	4 cut(s)	1062, 1270, 1350, 1818
Cfr13I	GGNCC	5 cut(s)	7, 8, 815, 1007, 1008
CseI	GACGC	1 cut(s)	138
Csp6I	GTAC	4 cut(s)	645, 966, 1394, 1634
CviAII	CATG	6 cut(s)	33, 485, 494, 599, 884, 1787
CviQI	GTAC	4 cut(s)	645, 966, 1394, 1634
DpnI	GATC	9 cut(s)	18, 363, 549, 582, 861, 978, 1171, 1413, 1620
DpnII	GATC	9 cut(s)	16, 361, 547, 580, 859, 976, 1169, 1411, 1618
DraIII	CACNNNGTG	1 cut(s)	1061
DrdI	GACNNNNNNGTC	1 cut(s)	1162
DriI	GACNNNNNGTC	1 cut(s)	789
DseDI	GACNNNNNNGTC	1 cut(s)	1162
Eam1104I	CTCTTC	6 cut(s)	61, 243, 1202, 1239, 1575, 1803
Eam1105I	GACNNNNNGTC	1 cut(s)	789
EarI	CTCTTC	6 cut(s)	61, 243, 1202, 1239, 1575, 1803
Ecl136II	GAGCTC	1 cut(s)	1430
Eco130I	CCWWGG	1 cut(s)	1749
Eco24I	GRGCYC	3 cut(s)	11, 1011, 1432
Eco31I	GGTCTC	1 cut(s)	776
Eco47I	GGWCC	1 cut(s)	815
Eco53kI	GAGCTC	1 cut(s)	1430
Eco57I	CTGAAG	3 cut(s)	149, 1194, 1658
EcoICRI	GAGCTC	1 cut(s)	1430
EcoO109I	RGGNCCY	2 cut(s)	1007, 1008
EcoRI	GAATTC	1 cut(s)	1422
EcoRII	CCWGG	2 cut(s)	817, 1010
EcoT14I	CCWWGG	1 cut(s)	1749
EcoT22I	ATGCAT	1 cut(s)	271
EcoT38I	GRGCYC	3 cut(s)	11, 1011, 1432
ErhI	CCWWGG	1 cut(s)	1749
FaeI	CATG	6 cut(s)	36, 488, 497, 602, 887, 1790
FalI	AAGNNNNNCTT	2 cut(s)	1371, 1403
FaqI	GGGAC	1 cut(s)	136
FatI	CATG	6 cut(s)	32, 484, 493, 598, 883, 1786
FauNDI	CATATG	2 cut(s)	327, 381
FblI	GTMKAC	1 cut(s)	152
Fnu4HI	GCNGC	3 cut(s)	302, 654, 1728
FokI	GGATG	8 cut(s)	113, 305, 473, 776, 1177, 1388, 1500, 1757
FriOI	GRGCYC	3 cut(s)	11, 1011, 1432
Fsp4HI	GCNGC	3 cut(s)	302, 654, 1728
FspBI	CTAG	2 cut(s)	27, 114
GluI	GCNGC	3 cut(s)	302, 654, 1728
HaeIII	GGCC	5 cut(s)	9, 31, 140, 1009, 1454
HapII	CCGG	2 cut(s)	305, 1852
HgaI	GACGC	1 cut(s)	138
Hin1II	CATG	6 cut(s)	36, 488, 497, 602, 887, 1790
HincII	GTYRAC	1 cut(s)	1318
HindII	GTYRAC	1 cut(s)	1318
HindIII	AAGCTT	5 cut(s)	619, 1200, 1282, 1350, 1791
HinfI	GANTC	7 cut(s)	117, 124, 210, 671, 880, 1163, 1231
HpaII	CCGG	2 cut(s)	305, 1852
HphI	GGTGA	3 cut(s)	779, 1061, 1590
Hpy166II	GTNNAC	2 cut(s)	153, 1318
Hpy188I	TCNGA	8 cut(s)	82, 97, 129, 424, 1000, 1174, 1434, 1693
Hpy8I	GTNNAC	2 cut(s)	153, 1318
HpyAV	CCTTC	9 cut(s)	35, 130, 751, 1001, 1412, 1465, 1605, 1657, 1702
HpyCH4III	ACNGT	3 cut(s)	844, 1091, 1633
HpyCH4IV	ACGT	1 cut(s)	1500
HpySE526I	ACGT	1 cut(s)	1500
Hsp92II	CATG	6 cut(s)	36, 488, 497, 602, 887, 1790
Kpn2I	TCCGGA	1 cut(s)	1851
Kzo9I	GATC	9 cut(s)	16, 361, 547, 580, 859, 976, 1169, 1411, 1618
LguI	GCTCTTC	1 cut(s)	243
LmnI	GCTCC	1 cut(s)	1680
Lsp1109I	GCAGC	3 cut(s)	288, 640, 1714
LweI	GCATC	9 cut(s)	256, 499, 919, 1199, 1321, 1522, 1555, 1686, 1735
MaeI	CTAG	2 cut(s)	27, 114
MaeII	ACGT	1 cut(s)	1500
MaeIII	GTNAC	2 cut(s)	568, 1546
MalI	GATC	9 cut(s)	18, 363, 549, 582, 861, 978, 1171, 1413, 1620
MbiI	CCGCTC	1 cut(s)	106
MboI	GATC	9 cut(s)	16, 361, 547, 580, 859, 976, 1169, 1411, 1618
MflI	RGATCY	4 cut(s)	547, 1169, 1411, 1618
MhlI	GDGCHC	3 cut(s)	11, 1011, 1432
MlyI	GAGTC	4 cut(s)	118, 219, 1172, 1225
MmeI	TCCRAC	2 cut(s)	447, 1319
Mph1103I	ATGCAT	1 cut(s)	271
MroI	TCCGGA	1 cut(s)	1851
MroXI	GAANNNNTTC	3 cut(s)	234, 1305, 1422
MseI	TTAA	6 cut(s)	162, 471, 807, 1077, 1763, 1796
MslI	CAYNNNNRTG	3 cut(s)	431, 495, 1503
MspI	CCGG	2 cut(s)	305, 1852
MspR9I	CCNGG	2 cut(s)	819, 1012
Mva1269I	GAATGC	2 cut(s)	166, 1729
MvaI	CCWGG	2 cut(s)	819, 1012
MvnI	CGCG	1 cut(s)	240
NdeI	CATATG	2 cut(s)	327, 381
NdeII	GATC	9 cut(s)	16, 361, 547, 580, 859, 976, 1169, 1411, 1618
NlaIII	CATG	6 cut(s)	36, 488, 497, 602, 887, 1790
NlaIV	GGNNCC	4 cut(s)	9, 421, 1008, 1009
NruI	TCGCGA	1 cut(s)	240
NsiI	ATGCAT	1 cut(s)	271
OliI	CACNNNNGTG	1 cut(s)	1503
PciSI	GCTCTTC	1 cut(s)	243
PctI	GAATGC	2 cut(s)	166, 1729
PdmI	GAANNNNTTC	3 cut(s)	234, 1305, 1422
PfeI	GAWTC	3 cut(s)	117, 671, 880
PkrI	GCNGC	3 cut(s)	303, 655, 1729
Ple19I	CGATCG	1 cut(s)	19
PleI	GAGTC	4 cut(s)	118, 218, 1171, 1225
PpsI	GAGTC	4 cut(s)	118, 218, 1171, 1225
Ppu21I	YACGTR	1 cut(s)	1501
PshBI	ATTAAT	2 cut(s)	807, 1763
Psp124BI	GAGCTC	1 cut(s)	1432
Psp6I	CCWGG	2 cut(s)	817, 1010
PspGI	CCWGG	2 cut(s)	817, 1010
PspN4I	GGNNCC	4 cut(s)	9, 421, 1008, 1009
PspOMI	GGGCCC	2 cut(s)	7, 1007
PspPI	GGNCC	5 cut(s)	7, 8, 815, 1007, 1008
PstI	CTGCAG	1 cut(s)	1362
PsuI	RGATCY	4 cut(s)	547, 1169, 1411, 1618
PvuI	CGATCG	1 cut(s)	19
RruI	TCGCGA	1 cut(s)	240
RsaI	GTAC	4 cut(s)	646, 967, 1395, 1635
RsaNI	GTAC	4 cut(s)	645, 966, 1394, 1634
RseI	CAYNNNNRTG	3 cut(s)	431, 495, 1503
SacI	GAGCTC	1 cut(s)	1432
SapI	GCTCTTC	1 cut(s)	243
SaqAI	TTAA	6 cut(s)	162, 471, 807, 1077, 1763, 1796
SatI	GCNGC	3 cut(s)	302, 654, 1728
Sau3AI	GATC	9 cut(s)	16, 361, 547, 580, 859, 976, 1169, 1411, 1618
Sau96I	GGNCC	5 cut(s)	7, 8, 815, 1007, 1008
SchI	GAGTC	4 cut(s)	118, 219, 1172, 1225
ScrFI	CCNGG	2 cut(s)	819, 1012
SduI	GDGCHC	3 cut(s)	11, 1011, 1432
SfaNI	GCATC	9 cut(s)	256, 499, 919, 1199, 1321, 1522, 1555, 1686, 1735
SfcI	CTRYAG	2 cut(s)	254, 1358
SinI	GGWCC	1 cut(s)	815
SmiMI	CAYNNNNRTG	3 cut(s)	431, 495, 1503
SmlI	CTYRAG	3 cut(s)	173, 917, 1655
SmoI	CTYRAG	3 cut(s)	173, 917, 1655
SsiI	CCGC	4 cut(s)	106, 748, 1178, 1445
SspMI	CTAG	2 cut(s)	27, 114
SstI	GAGCTC	1 cut(s)	1432
StyD4I	CCNGG	2 cut(s)	817, 1010
StyI	CCWWGG	1 cut(s)	1749
TaaI	ACNGT	3 cut(s)	844, 1091, 1633
TaiI	ACGT	1 cut(s)	1503
TaqI	TCGA	7 cut(s)	15, 274, 360, 1154, 1225, 1240, 1426
TatI	WGTACW	2 cut(s)	644, 1633
TfiI	GAWTC	3 cut(s)	117, 671, 880
Tru1I	TTAA	6 cut(s)	162, 471, 807, 1077, 1763, 1796
Tru9I	TTAA	6 cut(s)	162, 471, 807, 1077, 1763, 1796
TscAI	CASTG	4 cut(s)	847, 940, 1096, 1636
TseI	GCWGC	3 cut(s)	301, 653, 1727
TspDTI	ATGAA	5 cut(s)	309, 790, 872, 1314, 1803
TspRI	CASTG	4 cut(s)	847, 940, 1096, 1636
VpaK11BI	GGWCC	1 cut(s)	815
VspI	ATTAAT	2 cut(s)	807, 1763
XapI	RAATTY	6 cut(s)	158, 356, 947, 1100, 1422, 1847
XmiI	GTMKAC	1 cut(s)	152
XmnI	GAANNNNTTC	3 cut(s)	234, 1305, 1422
XspI	CTAG	2 cut(s)	27, 114
Zsp2I	ATGCAT	1 cut(s)	271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.