Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0006799

Physical Location & Seq

Genomic Coordinates Forward (+)

18148392 .. 18150101

Gene Structure 1710 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G181100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1059 bp

ATGGCTTTCTCTAAGATGTCCCTTCTGGTCTTCCTTGTGCCTCTCTTTCTGGGCTCTTCTCTGGCTCACGAGTTTTCGATCGTGGGTTATTCGCCTGAGGACCTGACTTGCATGGACAAGTTCATCATGCTCTTCGAATCGTGGATATCGAAACATAGCAAGATTTACCAAACCATGGAAGAGAAGCTGCATAGGTTTGAGATATTCAGAGACAATGTGAAGCACATTGATGAAAGGAACAAGAACCTTGATGTTGATAGCTACTGGCTTGGGGTGAATGAGTTTGCAGACCTGAGCCATGAAGAGTTCAAGAGCAAGTACTTGGGGCTAAAACCCGAATCCACAAGAAGGAGAGAGTCCACCGGAGACTTCAGTTATAGAGATTTTGATGTCGAAGCATTGCCCAAATCCGTGGACTGGAGAAAGAAAGGAGCTGTAACTCCTGTCAAGAACCAAGGTTCATGTGGTAGCTGTTGGGCATTTTCTACTGTTGCTGCTGTTGAGGGCATAAACCAGATTGTCACAGGAAACCTAACTTCCCTGTCTGAACAGCAACTGATAGATTGTGATAGATCATTCAACAATGGCTGCAATGGGGGCTTGATGGATTATGCATTTCAGTTTATAATGTCCAGTGGTGGGCTTAACAAGGAAGATGATTACCCATATCTTATGGAGGAAGGCAATTGTGAGAAAAAGAAGGGAGCTTCAGAGGTGGTGACTATAAACGGTTATCAAGACGTGCCTGAAAATAACGAAGAAGCTCTCCTTAAGGCACTGGCTAATCAGCCTCTTAGCATAGCTATTGACGCCTCTGGCAGAGATTTCCAGTTCTATAGTGGGGGAGTCTTCAACGGGCGTTGCGGGACTGAGCTTGATCATGGTGTAGCAGCCGTTGGATATGGTTCTCAAAAGGGGTTAGATTACATCATTGTGAGGAACTCATGGGGACCAAAGTGGGGTGAGAAGGGCTACGTAAGGATGAAGAGGAACACAGGAAAGCCAGAAGGACTCTGTGGCATCAACAAGATGGCTTCATATCCCACCAAAAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0000325 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005764 GO:0005773 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009987 GO:0010623 GO:0012501 GO:0016787 GO:0019538 GO:0030154 GO:0030163 GO:0032502 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0048468 GO:0048856 GO:0048869 GO:0051603 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

353

Amino Acids

39.49

Weight (kDa)

5.8

Isoelectric Point (pI)

34.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006799)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20850 AT4G35350 AT4G35350
fragaria_vesca	FvH4_2g16940
malus_domestica	MD05G1141100.v1.1 MD10G1142500.v1.1 MD11G1242400.v1.1
prunus_persica	Prupe.8G181100_v2.0.a1
pyrus_communis	pycom05g13650
rosa_chinensis	RchiOBHm_Chr6g0281081 RchiOBHm_Chr6g0281131
rosa_laevigata	RLG00000012992 RLG00000012998
rosa_multiflora	Rmu_co8502169.1_g000002 Rmu_sc0001705.1_g000005 Rmu_sc0001705.1_g000018
rosa_roxburghii	Rroxscaffold_7G00187270 Rroxscaffold_7G00187300 Rroxscaffold_7G00187320
rosa_rugosa	Rorug06G0138900 Rorug06G0139000 Rorug06G0139100
rosa_samantha	Rh6BG253900 Rh6BG254100
rosa_wichuraiana	Rw6G021770 Rw6G021780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	626
AccB7I	CCANNNNNTGG	1 cut(s)	175
AciI	CCGC	1 cut(s)	864
AcuI	CTGAAG	2 cut(s)	355, 693
AcyI	GRCGYC	1 cut(s)	810
AfaI	GTAC	1 cut(s)	320
AfiI	CCNNNNNNNGG	5 cut(s)	175, 348, 417, 639, 959
AflII	CTTAAG	1 cut(s)	770
AgsI	TTSAA	3 cut(s)	310, 580, 853
AjiI	CACGTC	1 cut(s)	742
AluBI	AGCT	8 cut(s)	187, 261, 434, 471, 707, 764, 803, 874
AluI	AGCT	8 cut(s)	187, 261, 434, 471, 707, 764, 803, 874
Alw26I	GTCTC	2 cut(s)	204, 360
AlwNI	CAGNNNCTG	1 cut(s)	556
ApeKI	GCWGC	4 cut(s)	187, 494, 588, 890
AspS9I	GGNCC	2 cut(s)	100, 950
AsuHPI	GGTGA	3 cut(s)	286, 730, 974
AsuII	TTCGAA	1 cut(s)	135
AvaII	GGWCC	2 cut(s)	100, 950
AxyI	CCTNAGG	1 cut(s)	96
BanII	GRGCYC	1 cut(s)	56
BauI	CACGAG	1 cut(s)	68
BbsI	GAAGAC	2 cut(s)	22, 841
BbvI	GCAGC	4 cut(s)	174, 481, 575, 902
BccI	CCATC	2 cut(s)	598, 1024
BceAI	ACGGC	1 cut(s)	878
BclI	TGATCA	1 cut(s)	877
BcoDI	GTCTC	2 cut(s)	204, 360
BfmI	CTRYAG	1 cut(s)	835
BfrI	CTTAAG	1 cut(s)	770
BisI	GCNGC	4 cut(s)	188, 495, 589, 891
BlsI	GCNGC	4 cut(s)	189, 496, 590, 892
BmcAI	AGTACT	1 cut(s)	320
Bme18I	GGWCC	2 cut(s)	100, 950
BmgBI	CACGTC	1 cut(s)	742
BmgT120I	GGNCC	2 cut(s)	100, 950
BmiI	GGNNCC	1 cut(s)	951
BmsI	GCATC	1 cut(s)	1029
BpiI	GAAGAC	2 cut(s)	22, 841
BpmI	CTGGAG	1 cut(s)	439
Bpu10I	CCTNAGC	1 cut(s)	293
Bpu14I	TTCGAA	1 cut(s)	135
BsaAI	YACGTR	1 cut(s)	976
BsaHI	GRCGYC	1 cut(s)	810
BsaJI	CCNNGG	3 cut(s)	174, 411, 454
BsaWI	WCCGGW	1 cut(s)	362
Bsc4I	CCNNNNNNNGG	5 cut(s)	175, 348, 417, 639, 959
Bse1I	ACTGG	5 cut(s)	269, 422, 633, 783, 829
Bse21I	CCTNAGG	1 cut(s)	96
Bse3DI	GCAATG	2 cut(s)	398, 598
BseDI	CCNNGG	3 cut(s)	174, 411, 454
BseGI	GGATG	1 cut(s)	987
BseLI	CCNNNNNNNGG	5 cut(s)	175, 348, 417, 639, 959
BseMI	GCAATG	2 cut(s)	398, 598
BseMII	CTCAG	3 cut(s)	87, 284, 861
BseNI	ACTGG	5 cut(s)	269, 422, 633, 783, 829
BseXI	GCAGC	4 cut(s)	174, 481, 575, 902
Bsh1285I	CGRYCG	1 cut(s)	81
BsiEI	CGRYCG	1 cut(s)	81
BsiSI	CCGG	1 cut(s)	363
BslFI	GGGAC	3 cut(s)	4, 880, 963
BslI	CCNNNNNNNGG	5 cut(s)	175, 348, 417, 639, 959
BsmAI	GTCTC	2 cut(s)	204, 360
BsmFI	GGGAC	3 cut(s)	4, 880, 963
Bsp119I	TTCGAA	1 cut(s)	135
Bsp1286I	GDGCHC	1 cut(s)	56
Bsp143I	GATC	3 cut(s)	78, 572, 877
Bsp19I	CCATGG	1 cut(s)	174
BspACI	CCGC	1 cut(s)	864
BspCNI	CTCAG	3 cut(s)	88, 285, 862
BspLI	GGNNCC	1 cut(s)	951
BspQI	GCTCTTC	2 cut(s)	61, 137
BspT104I	TTCGAA	1 cut(s)	135
BspTI	CTTAAG	1 cut(s)	770
BsrDI	GCAATG	2 cut(s)	398, 598
BsrI	ACTGG	5 cut(s)	269, 422, 633, 783, 829
BssECI	CCNNGG	3 cut(s)	174, 411, 454
BssMI	GATC	3 cut(s)	78, 572, 877
BssNI	GRCGYC	1 cut(s)	810
BssSI	CACGAG	1 cut(s)	68
BssT1I	CCWWGG	2 cut(s)	174, 454
Bst2BI	CACGAG	1 cut(s)	68
Bst4CI	ACNGT	2 cut(s)	490, 731
Bst6I	CTCTTC	5 cut(s)	61, 137, 174, 297, 980
BstACI	GRCGYC	1 cut(s)	810
BstAFI	CTTAAG	1 cut(s)	770
BstBAI	YACGTR	1 cut(s)	976
BstBI	TTCGAA	1 cut(s)	135
BstDEI	CTNAG	5 cut(s)	12, 96, 293, 794, 870
BstDSI	CCRYGG	2 cut(s)	174, 411
BstF5I	GGATG	1 cut(s)	987
BstKTI	GATC	3 cut(s)	81, 575, 880
BstMAI	GTCTC	2 cut(s)	204, 360
BstMBI	GATC	3 cut(s)	78, 572, 877
BstMCI	CGRYCG	1 cut(s)	81
BstMWI	GCNNNNNNNGC	2 cut(s)	597, 809
BstSFI	CTRYAG	1 cut(s)	835
BstSNI	TACGTA	1 cut(s)	976
BstV1I	GCAGC	4 cut(s)	174, 481, 575, 902
BstV2I	GAAGAC	2 cut(s)	22, 841
BstXI	CCANNNNNNTGG	1 cut(s)	412
Bsu36I	CCTNAGG	1 cut(s)	96
BtgI	CCRYGG	2 cut(s)	174, 411
BtrI	CACGTC	1 cut(s)	742
BtsCI	GGATG	1 cut(s)	987
BtsIMutI	CAGTG	2 cut(s)	640, 776
CaiI	CAGNNNCTG	1 cut(s)	556
Cfr13I	GGNCC	2 cut(s)	100, 950
CseI	GACGC	1 cut(s)	818
Csp6I	GTAC	1 cut(s)	319
CviAII	CATG	7 cut(s)	112, 127, 175, 299, 462, 881, 945
CviQI	GTAC	1 cut(s)	319
DdeI	CTNAG	5 cut(s)	12, 96, 293, 794, 870
DpnI	GATC	3 cut(s)	80, 574, 879
DpnII	GATC	3 cut(s)	78, 572, 877
Eam1104I	CTCTTC	5 cut(s)	61, 137, 174, 297, 980
EarI	CTCTTC	5 cut(s)	61, 137, 174, 297, 980
Eco105I	TACGTA	1 cut(s)	976
Eco130I	CCWWGG	2 cut(s)	174, 454
Eco24I	GRGCYC	1 cut(s)	56
Eco32I	GATATC	1 cut(s)	147
Eco47I	GGWCC	2 cut(s)	100, 950
Eco57I	CTGAAG	2 cut(s)	355, 693
Eco81I	CCTNAGG	1 cut(s)	96
EcoO109I	RGGNCCY	1 cut(s)	100
EcoRV	GATATC	1 cut(s)	147
EcoT14I	CCWWGG	2 cut(s)	174, 454
EcoT22I	ATGCAT	1 cut(s)	616
EcoT38I	GRGCYC	1 cut(s)	56
ErhI	CCWWGG	2 cut(s)	174, 454
FaeI	CATG	7 cut(s)	115, 130, 178, 302, 465, 884, 948
FalI	AAGNNNNNCTT	2 cut(s)	753, 785
FaqI	GGGAC	3 cut(s)	4, 880, 963
FatI	CATG	7 cut(s)	111, 126, 174, 298, 461, 880, 944
FauI	CCCGC	1 cut(s)	857
FbaI	TGATCA	1 cut(s)	877
Fnu4HI	GCNGC	4 cut(s)	188, 495, 589, 891
FokI	GGATG	1 cut(s)	994
FriOI	GRGCYC	1 cut(s)	56
Fsp4HI	GCNGC	4 cut(s)	188, 495, 589, 891
GluI	GCNGC	4 cut(s)	188, 495, 589, 891
GsuI	CTGGAG	1 cut(s)	439
HapII	CCGG	1 cut(s)	363
HgaI	GACGC	1 cut(s)	818
Hin1I	GRCGYC	1 cut(s)	810
Hin1II	CATG	7 cut(s)	115, 130, 178, 302, 465, 884, 948
HinfI	GANTC	5 cut(s)	137, 338, 356, 846, 1011
HpaII	CCGG	1 cut(s)	363
HphI	GGTGA	3 cut(s)	286, 730, 974
Hpy166II	GTNNAC	2 cut(s)	360, 415
Hpy188I	TCNGA	3 cut(s)	209, 547, 712
Hpy188III	TCNNGA	4 cut(s)	68, 310, 448, 737
Hpy8I	GTNNAC	2 cut(s)	360, 415
HpyAV	CCTTC	6 cut(s)	32, 342, 674, 694, 961, 1001
HpyCH4III	ACNGT	2 cut(s)	490, 731
HpyCH4IV	ACGT	2 cut(s)	741, 975
HpyCH4V	TGCA	5 cut(s)	111, 190, 287, 591, 614
HpyF10VI	GCNNNNNNNGC	2 cut(s)	597, 809
HpyF3I	CTNAG	5 cut(s)	12, 96, 293, 794, 870
HpySE526I	ACGT	2 cut(s)	741, 975
Hsp92I	GRCGYC	1 cut(s)	810
Hsp92II	CATG	7 cut(s)	115, 130, 178, 302, 465, 884, 948
Ksp22I	TGATCA	1 cut(s)	877
Kzo9I	GATC	3 cut(s)	78, 572, 877
LguI	GCTCTTC	2 cut(s)	61, 137
LmnI	GCTCC	2 cut(s)	431, 704
Lsp1109I	GCAGC	4 cut(s)	174, 481, 575, 902
LweI	GCATC	1 cut(s)	1029
MaeII	ACGT	2 cut(s)	741, 975
MaeIII	GTNAC	3 cut(s)	436, 520, 718
MalI	GATC	3 cut(s)	80, 574, 879
MboI	GATC	3 cut(s)	78, 572, 877
MboII	GAAGA	9 cut(s)	22, 48, 124, 191, 314, 665, 770, 841, 997
MfeI	CAATTG	1 cut(s)	685
MhlI	GDGCHC	1 cut(s)	56
MluCI	AATT	1 cut(s)	685
MlyI	GAGTC	3 cut(s)	365, 855, 1005
MmeI	TCCRAC	1 cut(s)	877
MnlI	CCTC	9 cut(s)	51, 91, 496, 670, 706, 801, 823, 930, 981
Mph1103I	ATGCAT	1 cut(s)	616
MseI	TTAA	2 cut(s)	645, 771
MslI	CAYNNNNRTG	2 cut(s)	228, 932
MspCI	CTTAAG	1 cut(s)	770
MspI	CCGG	1 cut(s)	363
MunI	CAATTG	1 cut(s)	685
MwoI	GCNNNNNNNGC	2 cut(s)	597, 809
NcoI	CCATGG	1 cut(s)	174
NdeII	GATC	3 cut(s)	78, 572, 877
NlaIII	CATG	7 cut(s)	115, 130, 178, 302, 465, 884, 948
NlaIV	GGNNCC	1 cut(s)	951
NmuCI	GTSAC	2 cut(s)	520, 718
NsiI	ATGCAT	1 cut(s)	616
NspV	TTCGAA	1 cut(s)	135
PciSI	GCTCTTC	2 cut(s)	61, 137
PcsI	WCGNNNNNNNCGW	1 cut(s)	146
PfeI	GAWTC	2 cut(s)	137, 338
PflMI	CCANNNNNTGG	1 cut(s)	175
PkrI	GCNGC	4 cut(s)	189, 496, 590, 892
Ple19I	CGATCG	1 cut(s)	81
PleI	GAGTC	3 cut(s)	364, 854, 1005
PpsI	GAGTC	3 cut(s)	364, 854, 1005
Ppu21I	YACGTR	1 cut(s)	976
PpuMI	RGGWCCY	1 cut(s)	100
PsiI	TTATAA	1 cut(s)	626
Psp5II	RGGWCCY	1 cut(s)	100
PspN4I	GGNNCC	1 cut(s)	951
PspPI	GGNCC	2 cut(s)	100, 950
PspPPI	RGGWCCY	1 cut(s)	100
PstNI	CAGNNNCTG	1 cut(s)	556
PvuI	CGATCG	1 cut(s)	81
RsaI	GTAC	1 cut(s)	320
RsaNI	GTAC	1 cut(s)	319
RseI	CAYNNNNRTG	2 cut(s)	228, 932
SapI	GCTCTTC	2 cut(s)	61, 137
SaqAI	TTAA	2 cut(s)	645, 771
SatI	GCNGC	4 cut(s)	188, 495, 589, 891
Sau3AI	GATC	3 cut(s)	78, 572, 877
Sau96I	GGNCC	2 cut(s)	100, 950
ScaI	AGTACT	1 cut(s)	320
SchI	GAGTC	3 cut(s)	365, 855, 1005
SduI	GDGCHC	1 cut(s)	56
SfaNI	GCATC	1 cut(s)	1029
SfcI	CTRYAG	1 cut(s)	835
SfuI	TTCGAA	1 cut(s)	135
SinI	GGWCC	2 cut(s)	100, 950
SmiMI	CAYNNNNRTG	2 cut(s)	228, 932
SmlI	CTYRAG	1 cut(s)	770
SmoI	CTYRAG	1 cut(s)	770
SnaBI	TACGTA	1 cut(s)	976
Sse9I	AATT	1 cut(s)	685
SsiI	CCGC	1 cut(s)	864
StyI	CCWWGG	2 cut(s)	174, 454
TaaI	ACNGT	2 cut(s)	490, 731
TaiI	ACGT	2 cut(s)	744, 978
TaqI	TCGA	4 cut(s)	77, 135, 149, 393
TasI	AATT	1 cut(s)	685
TatI	WGTACW	1 cut(s)	318
TfiI	GAWTC	2 cut(s)	137, 338
Tru1I	TTAA	2 cut(s)	645, 771
Tru9I	TTAA	2 cut(s)	645, 771
TscAI	CASTG	2 cut(s)	640, 783
TseFI	GTSAC	2 cut(s)	520, 718
TseI	GCWGC	4 cut(s)	187, 494, 588, 890
Tsp45I	GTSAC	2 cut(s)	520, 718
TspDTI	ATGAA	6 cut(s)	112, 246, 315, 450, 998, 1026
TspGWI	ACGGA	1 cut(s)	400
TspRI	CASTG	2 cut(s)	640, 783
Van91I	CCANNNNNTGG	1 cut(s)	175
Vha464I	CTTAAG	1 cut(s)	770
VpaK11BI	GGWCC	2 cut(s)	100, 950
XcmI	CCANNNNNNNNNTGG	2 cut(s)	461, 836
ZrmI	AGTACT	1 cut(s)	320
Zsp2I	ATGCAT	1 cut(s)	616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.