Prupe.8G188700_v2.0.a1

CRM domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
18473263 .. 18475455
2193 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G188700.1

Sequence Viewer

Length: 1359 bp
ATGCAGAAACTGGCGCGGACGAGCGTCTTCCGTTCACTGCGTCTTCTCAAATCTCATAATCGGCTCAATATTGAGAAACCCAGCTTGGGTGATGTTGTATGCAAGGTGTTTGTTCAAAAGCCTGCTGTTTGGGACTTGGTTGGTATTACAAGGTTTCCATTGGAGGGCCATCGATGGGTTCATTCAGCTCCTTGTGTTAACGCAGAGCACAAAGCTGCGGAGCCATTGGGAAATTCGAAAGAAGGCACAGTTGCTAAGGACACTGGCAGTGCTACAGTGAAGAGGAAAAAGCTCAAGGGGAAAAGAGCAGTCGTTAGGTGGCTCAAGTTCTTCAGGTGGAAGAAGAAGAAGGATTTTAAGAGAATGACTGCGGAGGAAAAAATTCTCCACAAGTTGAGAAAGGCTCAAAGGAAAGAGGAAAGGCTTGTTGAAGCTCTTAAGAAGATTGAGCCCTCGGAGACATCAGAGACAAACCATGATCCAGAAATATTGACACCAGAGGAACACTTCTTCTTTTTGAAGATGGGTCTCAAGTGCAAGAATTATGTGCCCGTTGGAAGACGGGGAATATACCAGGGTGTGATTCTGAACATGCACTTGCATTGGAAGAAACATCAAACTCTGCAAGTGGTGGTCAAGACATTCTCACCTGAGGAGGTTAAGGAGATTGCTTCTGAGCTGGCAAGATTAACTGGAGGGATTGTGCTCGGCATTCATGAAGAATACACAATAATTATGTACAGAGGGAAGAACTATTCTCAGCCACCGACAGAGATTATGTCACCTAGGGTCACTCTCTCTAGGAAGAAGGCTTTGGATAAATCGAAGTATAAGGATGGCCTTCGGGCTGTAAGGAAATATATTCCAAAACTCGAACAGGATCTTGATCTGCTTCGAGCACAGGCTAAAAGGAAACCTGAAATTGAAACAGATGCTATTGAAGAAACCCAAGAAACTGACATTGATAGTGTAGACTCCAGGAGCTCCTCAAATTTCAAGCTGGAGCCTTCAGATAAGCTGAAAGAAATAATCGGTCGAAGCAGGGGATGCTCTGAAGATGACCTTGTAACGGATTCAGAAATGCCTTCGGACTCCGAACATTTATCAGATATTTTTGAGACTGACTCTGACAAGGAGACTGAGGAGAAGGCAGAGCGACCCTTGTATTTGGAAGAGTTTGAAAAGTTTCCAGTTGAAAGTGATGGAGAACCTGAAGATTTTGAGGATCACCTGCGTCAAATATCCATGGACTCAAAGAAGGCTAAATCAGTGAACGAAGATGCTGACTTGCCAAATTTTGATGAGGTTGATAGGATATTTCTGCGCGCTGCTTCACTTTTAAAGAAAAAAAGAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

453

Amino Acids

52.18

Weight (kDa)

9.02

Isoelectric Point (pI)

56.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1239
Acc36I ACCTGC 1 cut(s) 1239
AccI GTMKAC 1 cut(s) 972
AccII CGCG 2 cut(s) 16, 1326
AciI CCGC 3 cut(s) 16, 218, 371
AclWI GGATC 3 cut(s) 473, 888, 1233
AcsI RAATTY 4 cut(s) 232, 381, 991, 1294
AcuI CTGAAG 4 cut(s) 316, 993, 1074, 1233
AfaI GTAC 1 cut(s) 740
AfiI CCNNNNNNNGG 4 cut(s) 86, 164, 175, 1069
AflII CTTAAG 1 cut(s) 437
AgsI TTSAA 8 cut(s) 116, 431, 520, 926, 941, 997, 1181, 1196
AjnI CCWGG 2 cut(s) 573, 977
AjuI GAANNNNNNNTTGG 4 cut(s) 68, 100, 797, 829
AluBI AGCT 9 cut(s) 84, 188, 215, 292, 434, 679, 984, 1000, 1018
AluI AGCT 9 cut(s) 84, 188, 215, 292, 434, 679, 984, 1000, 1018
Alw21I GWGCWC 4 cut(s) 210, 708, 901, 986
Alw26I GTCTC 5 cut(s) 452, 461, 533, 1112, 1130
AlwI GGATC 3 cut(s) 473, 888, 1233
AlwNI CAGNNNCTG 1 cut(s) 10
AoxI GGCC 2 cut(s) 166, 838
ApeKI GCWGC 2 cut(s) 215, 1328
ApoI RAATTY 4 cut(s) 232, 381, 991, 1294
Asp700I GAANNNNTTC 2 cut(s) 381, 1185
AspA2I CCTAGG 1 cut(s) 785
AspLEI GCGC 3 cut(s) 16, 1326, 1328
AspS9I GGNCC 1 cut(s) 166
AsuHPI GGTGA 4 cut(s) 101, 639, 774, 1220
AsuII TTCGAA 1 cut(s) 236
AvrII CCTAGG 1 cut(s) 785
AxyI CCTNAGG 1 cut(s) 651
BaeGI GKGCMC 1 cut(s) 552
BanII GRGCYC 2 cut(s) 453, 986
BbsI GAAGAC 3 cut(s) 19, 35, 565
Bbv12I GWGCWC 4 cut(s) 210, 708, 901, 986
BbvI GCAGC 2 cut(s) 202, 1315
BccI CCATC 5 cut(s) 168, 177, 517, 830, 1196
BciT130I CCWGG 2 cut(s) 575, 979
BcoDI GTCTC 5 cut(s) 452, 461, 533, 1112, 1130
BfaI CTAG 2 cut(s) 786, 801
BfmI CTRYAG 1 cut(s) 273
BfrI CTTAAG 1 cut(s) 437
BfuAI ACCTGC 1 cut(s) 1239
BisI GCNGC 2 cut(s) 216, 1329
BlnI CCTAGG 1 cut(s) 785
BlsI GCNGC 2 cut(s) 217, 1330
Bme1390I CCNGG 2 cut(s) 575, 979
BmgT120I GGNCC 1 cut(s) 166
BmiI GGNNCC 2 cut(s) 222, 1005
BmrFI CCNGG 2 cut(s) 575, 979
BmsI GCATC 3 cut(s) 922, 1037, 1270
BoxI GACNNNNGTC 1 cut(s) 23
BpiI GAAGAC 3 cut(s) 19, 35, 565
BplI GAGNNNNNCTC 4 cut(s) 388, 420, 1109, 1141
BpmI CTGGAG 3 cut(s) 714, 961, 1022
Bpu10I CCTNAGC 1 cut(s) 255
Bpu14I TTCGAA 1 cut(s) 236
BpuEI CTTGAG 3 cut(s) 278, 308, 515
Bsa29I ATCGAT 1 cut(s) 172
BsaBI GATNNNNATC 1 cut(s) 885
BsaI GGTCTC 1 cut(s) 533
BsaJI CCNNGG 4 cut(s) 453, 574, 785, 1245
BsaXI ACNNNNNCTCC 2 cut(s) 687, 717
Bsc4I CCNNNNNNNGG 4 cut(s) 86, 164, 175, 1069
Bse1I ACTGG 4 cut(s) 15, 268, 697, 1190
Bse21I CCTNAGG 1 cut(s) 651
Bse8I GATNNNNATC 1 cut(s) 885
BseBI CCWGG 2 cut(s) 575, 979
BseCI ATCGAT 1 cut(s) 172
BseDI CCNNGG 4 cut(s) 453, 574, 785, 1245
BseGI GGATG 2 cut(s) 841, 1052
BseJI GATNNNNATC 1 cut(s) 885
BseLI CCNNNNNNNGG 4 cut(s) 86, 164, 175, 1069
BseMII CTCAG 4 cut(s) 642, 666, 773, 1131
BseNI ACTGG 4 cut(s) 15, 268, 697, 1190
BsePI GCGCGC 1 cut(s) 1324
BseRI GAGGAG 3 cut(s) 668, 976, 1157
BseSI GKGCMC 1 cut(s) 552
BseXI GCAGC 2 cut(s) 202, 1315
BseYI CCCAGC 1 cut(s) 80
Bsh1236I CGCG 2 cut(s) 16, 1326
Bsh1285I CGRYCG 1 cut(s) 1036
BshFI GGCC 2 cut(s) 168, 840
BshVI ATCGAT 1 cut(s) 172
BsiEI CGRYCG 1 cut(s) 1036
BsiHKAI GWGCWC 4 cut(s) 210, 708, 901, 986
BslFI GGGAC 1 cut(s) 146
BslI CCNNNNNNNGG 4 cut(s) 86, 164, 175, 1069
BsmAI GTCTC 5 cut(s) 452, 461, 533, 1112, 1130
BsmFI GGGAC 1 cut(s) 146
BsmI GAATGC 1 cut(s) 711
BsnI GGCC 2 cut(s) 168, 840
Bso31I GGTCTC 1 cut(s) 533
Bsp119I TTCGAA 1 cut(s) 236
Bsp1286I GDGCHC 6 cut(s) 210, 453, 552, 708, 901, 986
Bsp1407I TGTACA 1 cut(s) 738
Bsp143I GATC 4 cut(s) 478, 880, 886, 1225
Bsp19I CCATGG 1 cut(s) 1245
BspACI CCGC 3 cut(s) 16, 218, 371
BspANI GGCC 2 cut(s) 168, 840
BspCNI CTCAG 4 cut(s) 643, 667, 772, 1132
BspDI ATCGAT 1 cut(s) 172
BspFNI CGCG 2 cut(s) 16, 1326
BspHI TCATGA 1 cut(s) 715
BspLI GGNNCC 2 cut(s) 222, 1005
BspMI ACCTGC 1 cut(s) 1239
BspPI GGATC 3 cut(s) 473, 888, 1233
BspT104I TTCGAA 1 cut(s) 236
BspTI CTTAAG 1 cut(s) 437
BspTNI GGTCTC 1 cut(s) 533
BsrGI TGTACA 1 cut(s) 738
BsrI ACTGG 4 cut(s) 15, 268, 697, 1190
BssECI CCNNGG 4 cut(s) 453, 574, 785, 1245
BssHII GCGCGC 1 cut(s) 1324
BssMI GATC 4 cut(s) 478, 880, 886, 1225
BssT1I CCWWGG 2 cut(s) 785, 1245
Bst2UI CCWGG 2 cut(s) 575, 979
Bst4CI ACNGT 2 cut(s) 250, 277
Bst6I CTCTTC 2 cut(s) 275, 1167
BstAFI CTTAAG 1 cut(s) 437
BstAPI GCANNNNNTGC 1 cut(s) 1047
BstAUI TGTACA 1 cut(s) 738
BstBI TTCGAA 1 cut(s) 236
BstC8I GCNNGC 3 cut(s) 123, 681, 1326
BstDEI CTNAG 5 cut(s) 255, 651, 675, 759, 1140
BstDSI CCRYGG 1 cut(s) 1245
BstF5I GGATG 2 cut(s) 841, 1052
BstFNI CGCG 2 cut(s) 16, 1326
BstHHI GCGC 3 cut(s) 16, 1326, 1328
BstKTI GATC 4 cut(s) 481, 883, 889, 1228
BstMAI GTCTC 5 cut(s) 452, 461, 533, 1112, 1130
BstMBI GATC 4 cut(s) 478, 880, 886, 1225
BstMCI CGRYCG 1 cut(s) 1036
BstMWI GCNNNNNNNGC 1 cut(s) 1047
BstNI CCWGG 2 cut(s) 575, 979
BstNSI RCATGY 1 cut(s) 595
BstPAI GACNNNNGTC 1 cut(s) 23
BstSCI CCNGG 2 cut(s) 573, 977
BstSFI CTRYAG 1 cut(s) 273
BstSLI GKGCMC 1 cut(s) 552
BstUI CGCG 2 cut(s) 16, 1326
BstV1I GCAGC 2 cut(s) 202, 1315
BstV2I GAAGAC 3 cut(s) 19, 35, 565
BstX2I RGATCY 1 cut(s) 880
BstYI RGATCY 1 cut(s) 880
Bsu15I ATCGAT 1 cut(s) 172
Bsu36I CCTNAGG 1 cut(s) 651
BsuRI GGCC 2 cut(s) 168, 840
BsuTUI ATCGAT 1 cut(s) 172
BtgI CCRYGG 1 cut(s) 1245
BtsCI GGATG 2 cut(s) 841, 1052
BtsI GCAGTG 2 cut(s) 35, 274
BtsIMutI CAGTG 5 cut(s) 35, 261, 274, 282, 1275
BveI ACCTGC 1 cut(s) 1239
Cac8I GCNNGC 3 cut(s) 123, 681, 1326
CaiI CAGNNNCTG 1 cut(s) 10
CciI TCATGA 1 cut(s) 715
CfoI GCGC 3 cut(s) 16, 1326, 1328
Cfr13I GGNCC 1 cut(s) 166
ClaI ATCGAT 1 cut(s) 172
CseI GACGC 3 cut(s) 13, 29, 1223
Csp6I GTAC 1 cut(s) 739
CviAII CATG 4 cut(s) 476, 592, 716, 1246
CviQI GTAC 1 cut(s) 739
DdeI CTNAG 5 cut(s) 255, 651, 675, 759, 1140
DpnI GATC 4 cut(s) 480, 882, 888, 1227
DpnII GATC 4 cut(s) 478, 880, 886, 1225
DraI TTTAAA 1 cut(s) 1341
Eam1104I CTCTTC 2 cut(s) 275, 1167
EarI CTCTTC 2 cut(s) 275, 1167
Ecl136II GAGCTC 1 cut(s) 984
Eco130I CCWWGG 2 cut(s) 785, 1245
Eco24I GRGCYC 2 cut(s) 453, 986
Eco31I GGTCTC 1 cut(s) 533
Eco53kI GAGCTC 1 cut(s) 984
Eco57I CTGAAG 4 cut(s) 316, 993, 1074, 1233
Eco81I CCTNAGG 1 cut(s) 651
EcoICRI GAGCTC 1 cut(s) 984
EcoRII CCWGG 2 cut(s) 573, 977
EcoT14I CCWWGG 2 cut(s) 785, 1245
EcoT38I GRGCYC 2 cut(s) 453, 986
ErhI CCWWGG 2 cut(s) 785, 1245
FaeI CATG 4 cut(s) 479, 595, 719, 1249
FalI AAGNNNNNCTT 2 cut(s) 1047, 1079
FaqI GGGAC 1 cut(s) 146
FatI CATG 4 cut(s) 475, 591, 715, 1245
FblI GTMKAC 1 cut(s) 972
Fnu4HI GCNGC 2 cut(s) 216, 1329
FokI GGATG 2 cut(s) 848, 1059
FriOI GRGCYC 2 cut(s) 453, 986
Fsp4HI GCNGC 2 cut(s) 216, 1329
FspBI CTAG 2 cut(s) 786, 801
GlaI GCGC 3 cut(s) 15, 1325, 1327
GluI GCNGC 2 cut(s) 216, 1329
GsaI CCCAGC 1 cut(s) 84
GsuI CTGGAG 3 cut(s) 714, 961, 1022
HaeIII GGCC 2 cut(s) 168, 840
HgaI GACGC 3 cut(s) 13, 29, 1223
HhaI GCGC 3 cut(s) 16, 1326, 1328
Hin1II CATG 4 cut(s) 479, 595, 719, 1249
Hin6I GCGC 3 cut(s) 14, 1324, 1326
HinP1I GCGC 3 cut(s) 14, 1324, 1326
HincII GTYRAC 1 cut(s) 199
HindII GTYRAC 1 cut(s) 199
HinfI GANTC 6 cut(s) 583, 974, 1073, 1091, 1124, 1250
HpaI GTTAAC 1 cut(s) 199
HphI GGTGA 4 cut(s) 101, 639, 774, 1220
Hpy166II GTNNAC 4 cut(s) 35, 199, 973, 1273
Hpy188III TCNNGA 4 cut(s) 482, 637, 716, 884
Hpy8I GTNNAC 4 cut(s) 35, 199, 973, 1273
HpyAV CCTTC 8 cut(s) 236, 343, 802, 851, 1017, 1095, 1141, 1252
HpyCH4III ACNGT 2 cut(s) 250, 277
HpyCH4V TGCA 6 cut(s) 4, 102, 537, 595, 601, 625
HpyF10VI GCNNNNNNNGC 1 cut(s) 1047
HpyF3I CTNAG 5 cut(s) 255, 651, 675, 759, 1140
Hsp92II CATG 4 cut(s) 479, 595, 719, 1249
HspAI GCGC 3 cut(s) 14, 1324, 1326
KspAI GTTAAC 1 cut(s) 199
Kzo9I GATC 4 cut(s) 478, 880, 886, 1225
LmnI GCTCC 5 cut(s) 193, 220, 981, 989, 1003
Lsp1109I GCAGC 2 cut(s) 202, 1315
LweI GCATC 3 cut(s) 922, 1037, 1270
MaeI CTAG 2 cut(s) 786, 801
MaeIII GTNAC 3 cut(s) 780, 790, 1066
MalI GATC 4 cut(s) 480, 882, 888, 1227
MboI GATC 4 cut(s) 478, 880, 886, 1225
MflI RGATCY 1 cut(s) 880
MhlI GDGCHC 6 cut(s) 210, 453, 552, 708, 901, 986
MluCI AATT 8 cut(s) 232, 381, 541, 732, 921, 991, 1294, 1354
MlyI GAGTC 4 cut(s) 968, 1085, 1118, 1244
MmeI TCCRAC 1 cut(s) 535
MroXI GAANNNNTTC 2 cut(s) 381, 1185
MseI TTAA 6 cut(s) 198, 357, 438, 660, 689, 1340
MspCI CTTAAG 1 cut(s) 437
MspR9I CCNGG 2 cut(s) 575, 979
Mva1269I GAATGC 1 cut(s) 711
MvaI CCWGG 2 cut(s) 575, 979
MvnI CGCG 2 cut(s) 16, 1326
MwoI GCNNNNNNNGC 1 cut(s) 1047
NcoI CCATGG 1 cut(s) 1245
NdeII GATC 4 cut(s) 478, 880, 886, 1225
NlaIII CATG 4 cut(s) 479, 595, 719, 1249
NlaIV GGNNCC 2 cut(s) 222, 1005
NmeAIII GCCGAG 1 cut(s) 687
NmuCI GTSAC 2 cut(s) 780, 790
NspI RCATGY 1 cut(s) 595
NspV TTCGAA 1 cut(s) 236
PagI TCATGA 1 cut(s) 715
PaqCI CACCTGC 1 cut(s) 1239
PauI GCGCGC 1 cut(s) 1324
PctI GAATGC 1 cut(s) 711
PdmI GAANNNNTTC 2 cut(s) 381, 1185
PfeI GAWTC 2 cut(s) 583, 1073
PfoI TCCNGGA 1 cut(s) 977
PkrI GCNGC 2 cut(s) 217, 1330
PleI GAGTC 4 cut(s) 968, 1085, 1118, 1244
PpsI GAGTC 4 cut(s) 968, 1085, 1118, 1244
PshAI GACNNNNGTC 1 cut(s) 23
Psp124BI GAGCTC 1 cut(s) 986
Psp6I CCWGG 2 cut(s) 573, 977
PspFI CCCAGC 1 cut(s) 80
PspGI CCWGG 2 cut(s) 573, 977
PspN4I GGNNCC 2 cut(s) 222, 1005
PspPI GGNCC 1 cut(s) 166
PstNI CAGNNNCTG 1 cut(s) 10
PsuI RGATCY 1 cut(s) 880
PteI GCGCGC 1 cut(s) 1324
RsaI GTAC 1 cut(s) 740
RsaNI GTAC 1 cut(s) 739
SacI GAGCTC 1 cut(s) 986
SaqAI TTAA 6 cut(s) 198, 357, 438, 660, 689, 1340
SatI GCNGC 2 cut(s) 216, 1329
Sau3AI GATC 4 cut(s) 478, 880, 886, 1225
Sau96I GGNCC 1 cut(s) 166
SchI GAGTC 4 cut(s) 968, 1085, 1118, 1244
ScrFI CCNGG 2 cut(s) 575, 979
SduI GDGCHC 6 cut(s) 210, 453, 552, 708, 901, 986
SfaNI GCATC 3 cut(s) 922, 1037, 1270
SfcI CTRYAG 1 cut(s) 273
SfuI TTCGAA 1 cut(s) 236
SmlI CTYRAG 4 cut(s) 293, 323, 437, 530
SmoI CTYRAG 4 cut(s) 293, 323, 437, 530
Sse9I AATT 8 cut(s) 232, 381, 541, 732, 921, 991, 1294, 1354
SsiI CCGC 3 cut(s) 16, 218, 371
SspI AATATT 2 cut(s) 70, 489
SspMI CTAG 2 cut(s) 786, 801
SstI GAGCTC 1 cut(s) 986
StyD4I CCNGG 2 cut(s) 573, 977
StyI CCWWGG 2 cut(s) 785, 1245
TaaI ACNGT 2 cut(s) 250, 277
TaqI TCGA 6 cut(s) 172, 236, 824, 873, 895, 1036
TaqII GACCGA 1 cut(s) 1022
TasI AATT 8 cut(s) 232, 381, 541, 732, 921, 991, 1294, 1354
TatI WGTACW 1 cut(s) 738
TfiI GAWTC 2 cut(s) 583, 1073
Tru1I TTAA 6 cut(s) 198, 357, 438, 660, 689, 1340
Tru9I TTAA 6 cut(s) 198, 357, 438, 660, 689, 1340
TscAI CASTG 5 cut(s) 42, 268, 274, 282, 1275
TseFI GTSAC 2 cut(s) 780, 790
TseI GCWGC 2 cut(s) 215, 1328
Tsp45I GTSAC 2 cut(s) 780, 790
TspDTI ATGAA 3 cut(s) 170, 704, 732
TspGWI ACGGA 2 cut(s) 20, 1085
TspRI CASTG 5 cut(s) 42, 268, 274, 282, 1275
Vha464I CTTAAG 1 cut(s) 437
XapI RAATTY 4 cut(s) 232, 381, 991, 1294
XceI RCATGY 1 cut(s) 595
XmaJI CCTAGG 1 cut(s) 785
XmiI GTMKAC 1 cut(s) 972
XmnI GAANNNNTTC 2 cut(s) 381, 1185
XspI CTAG 2 cut(s) 786, 801
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.