pycom05g14900

CRM domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
18504718 .. 18506794
2077 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g14900.2

Sequence Viewer

Length: 1368 bp
ATGCAAAAACTGGCGCGGCCGAGCGTTTTCCGGTCACTGCGCCTTCTCAAATCCCACAACCACCCCAAAATATACCGACCCAGTAGCTTGGGTGATGTTGTATGCAAGGTGTTCGATGAAAAGCCTGTGTGGGACGCGGTGGGCATTGCAAGGTTTCCGTTGGAGTGCCAAAAATGGGTTCATTCGGCTCCGTGTGTTAACACAGAGCACAAGGCTGTGGAGCCGCTGGAAAATTCAAAAGACGGCGCGGGTGCTGAGGCCACTGGTGATGGTAAAGTGAAGAGGAAAAAGCTCAAGGGAAAAAGGGCAGTGGTTAGGTGGCTCAAGTTCTTCAGGTATAAGAAGAAGAAAGACTATGAGAGAATGACTGCTGAGGAGAAAATTCTCCACAAGTTAAGAAAGGCTCAAAGGAAAGAGGAAAGGCTTGTTGAAGCTCTCAAAAAGATTGAGCCCTCGGAGCCATCGGAGACAAACCATGATCGAGAAATATTGACGCCGGAGGAACACTTCTACTTTCTGAAGATGGGTCTCAAGTGCAAGAACTATGTGCCCGTTGGTAGACGGGGGATATACCAGGGTGTGATTCTGAACATGCACTTGCATTGGAAGAAACATCAAACTCTGCAGGTGGTGGTGAAAACATTCTCACCTGAAGAGGTTAAGGAGATTGCTTCTGAGCTGGCTAGATTAACTGGAGGGATTGTGCTCGGCATTCATGAAGAATACACAATAATTATGTATAGAGGGAAGAACTATTCTCAGCCTCCAACAGAAATCATGTCACCCAGGGTCACTCTCTCCAGGAAGAAGGCTTTGGATAAATCGAAGTATAAGGATGGTCTTCGAGCCGTAAGGAAATATATTCCAAAACTTGAACAAGATCTTGAGTTGCTTCGAGCACAGGCTAAAAGGAAAGTAGACATCAATGCAGATTACATTGAAGAAACGCAAGAAACTGGTACTGAATCTACTGATAGTGTACACTCTGGGAGCTCCTCAAAGTTGAAGCTGGAGGCTTCAAATAAGGTAAAAGAAATGATGGATAGGAGCAAGGAACGCTCTGGGGATGACCTTTCAACAGATGTGGATATAGCTTCAGACTCTGAAGATTTATCCGATATTTTTGATACCGACTCCGAGAAGGAGACCGAGAAGAAGGCAGAGCGACCTCTGTATTTGGAAGAGTTTGAAAAGTTTCCAGTTGAAAGTGATGGCGAACCTGAAGATTTTGAGGATCACCTGCGTCAAATATCTAGGGACGCAAAGAAGGATAAATCCTTGGACGAAGATGCCGGCTTGCCAAATTTTGATGAAGTTGATCGAGTATTTCTGCGTGCTGCTTCACTTTTAAAGAAAAAAAGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

456

Amino Acids

52.53

Weight (kDa)

9.04

Isoelectric Point (pI)

50.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 616, 1248
Acc36I ACCTGC 2 cut(s) 616, 1248
AccI GTMKAC 2 cut(s) 559, 918
AccII CGCG 3 cut(s) 16, 137, 248
AciI CCGC 4 cut(s) 16, 137, 224, 248
AclWI GGATC 1 cut(s) 1242
AcoI YGGCCR 1 cut(s) 17
AcsI RAATTY 3 cut(s) 232, 381, 1303
AcuI CTGAAG 6 cut(s) 316, 539, 672, 1080, 1125, 1242
AcyI GRCGYC 1 cut(s) 494
AfaI GTAC 2 cut(s) 961, 981
AfiI CCNNNNNNNGG 1 cut(s) 175
AgsI TTSAA 9 cut(s) 237, 431, 875, 941, 1006, 1020, 1077, 1190, 1205
AjnI CCWGG 3 cut(s) 573, 785, 800
AjuI GAANNNNNNNTTGG 4 cut(s) 162, 194, 797, 829
AluBI AGCT 7 cut(s) 87, 292, 434, 679, 993, 1009, 1094
AluI AGCT 7 cut(s) 87, 292, 434, 679, 993, 1009, 1094
Alw21I GWGCWC 4 cut(s) 210, 708, 901, 995
Alw26I GTCTC 3 cut(s) 461, 533, 1139
AlwI GGATC 1 cut(s) 1242
AlwNI CAGNNNCTG 1 cut(s) 1103
AoxI GGCC 2 cut(s) 17, 258
ApeKI GCWGC 1 cut(s) 1337
ApoI RAATTY 3 cut(s) 232, 381, 1303
Asp700I GAANNNNTTC 2 cut(s) 641, 1194
AspLEI GCGC 3 cut(s) 16, 42, 248
AsuHPI GGTGA 6 cut(s) 104, 278, 639, 646, 774, 1229
BaeGI GKGCMC 1 cut(s) 552
BanII GRGCYC 2 cut(s) 453, 995
BbsI GAAGAC 1 cut(s) 833
Bbv12I GWGCWC 4 cut(s) 210, 708, 901, 995
BbvCI CCTCAGC 2 cut(s) 255, 372
BbvI GCAGC 1 cut(s) 1324
BccI CCATC 6 cut(s) 263, 469, 517, 830, 1033, 1205
BceAI ACGGC 2 cut(s) 259, 833
BcgI CGANNNNNNTGC 2 cut(s) 94, 128
BciT130I CCWGG 3 cut(s) 575, 787, 802
BcoDI GTCTC 3 cut(s) 461, 533, 1139
BfaI CTAG 2 cut(s) 684, 1254
BfmI CTRYAG 1 cut(s) 623
BfuAI ACCTGC 2 cut(s) 616, 1248
BglII AGATCT 1 cut(s) 880
BisI GCNGC 3 cut(s) 17, 224, 1338
BlsI GCNGC 3 cut(s) 18, 225, 1339
Bme1390I CCNGG 3 cut(s) 575, 787, 802
BmiI GGNNCC 3 cut(s) 189, 222, 459
BmrFI CCNGG 3 cut(s) 575, 787, 802
BmrI ACTGGG 1 cut(s) 75
BmsI GCATC 1 cut(s) 1279
BmuI ACTGGG 1 cut(s) 75
BpiI GAAGAC 1 cut(s) 833
BpmI CTGGAG 3 cut(s) 714, 784, 1031
Bpu10I CCTNAGC 2 cut(s) 255, 372
BpuEI CTTGAG 4 cut(s) 278, 308, 515, 905
BsaHI GRCGYC 1 cut(s) 494
BsaI GGTCTC 2 cut(s) 533, 1139
BsaJI CCNNGG 5 cut(s) 453, 574, 785, 786, 1278
BsaWI WCCGGW 1 cut(s) 30
BsaXI ACNNNNNCTCC 2 cut(s) 687, 717
Bsc4I CCNNNNNNNGG 1 cut(s) 175
Bse118I RCCGGY 1 cut(s) 1292
Bse1I ACTGG 6 cut(s) 15, 81, 268, 697, 961, 1199
Bse3DI GCAATG 1 cut(s) 144
BseBI CCWGG 3 cut(s) 575, 787, 802
BseDI CCNNGG 5 cut(s) 453, 574, 785, 786, 1278
BseGI GGATG 2 cut(s) 841, 1072
BseLI CCNNNNNNNGG 1 cut(s) 175
BseMI GCAATG 1 cut(s) 144
BseMII CTCAG 4 cut(s) 246, 363, 666, 773
BseNI ACTGG 6 cut(s) 15, 81, 268, 697, 961, 1199
BseRI GAGGAG 2 cut(s) 389, 985
BseSI GKGCMC 1 cut(s) 552
BseX3I CGGCCG 1 cut(s) 17
BseXI GCAGC 1 cut(s) 1324
Bsh1236I CGCG 3 cut(s) 16, 137, 248
Bsh1285I CGRYCG 1 cut(s) 20
BshFI GGCC 2 cut(s) 19, 260
BsiEI CGRYCG 1 cut(s) 20
BsiHKAI GWGCWC 4 cut(s) 210, 708, 901, 995
BsiSI CCGG 3 cut(s) 31, 497, 1293
BslFI GGGAC 2 cut(s) 146, 1271
BslI CCNNNNNNNGG 1 cut(s) 175
BsmAI GTCTC 3 cut(s) 461, 533, 1139
BsmFI GGGAC 2 cut(s) 146, 1271
BsmI GAATGC 1 cut(s) 711
BsnI GGCC 2 cut(s) 19, 260
Bso31I GGTCTC 2 cut(s) 533, 1139
Bsp1286I GDGCHC 6 cut(s) 210, 453, 552, 708, 901, 995
Bsp1407I TGTACA 1 cut(s) 979
Bsp143I GATC 4 cut(s) 478, 880, 1234, 1318
BspACI CCGC 4 cut(s) 16, 137, 224, 248
BspANI GGCC 2 cut(s) 19, 260
BspCNI CTCAG 4 cut(s) 247, 364, 667, 772
BspFNI CGCG 3 cut(s) 16, 137, 248
BspHI TCATGA 1 cut(s) 715
BspLI GGNNCC 3 cut(s) 189, 222, 459
BspMAI CTGCAG 1 cut(s) 627
BspMI ACCTGC 2 cut(s) 616, 1248
BspPI GGATC 1 cut(s) 1242
BspTNI GGTCTC 2 cut(s) 533, 1139
BsrDI GCAATG 1 cut(s) 144
BsrFI RCCGGY 1 cut(s) 1292
BsrGI TGTACA 1 cut(s) 979
BsrI ACTGG 6 cut(s) 15, 81, 268, 697, 961, 1199
BssAI RCCGGY 1 cut(s) 1292
BssECI CCNNGG 5 cut(s) 453, 574, 785, 786, 1278
BssMI GATC 4 cut(s) 478, 880, 1234, 1318
BssNI GRCGYC 1 cut(s) 494
BssT1I CCWWGG 1 cut(s) 1278
Bst2UI CCWGG 3 cut(s) 575, 787, 802
Bst6I CTCTTC 3 cut(s) 275, 648, 1176
BstACI GRCGYC 1 cut(s) 494
BstAUI TGTACA 1 cut(s) 979
BstC8I GCNNGC 4 cut(s) 681, 1294, 1298, 1335
BstDEI CTNAG 4 cut(s) 255, 372, 675, 759
BstF5I GGATG 2 cut(s) 841, 1072
BstFNI CGCG 3 cut(s) 16, 137, 248
BstHHI GCGC 3 cut(s) 16, 42, 248
BstKTI GATC 4 cut(s) 481, 883, 1237, 1321
BstMAI GTCTC 3 cut(s) 461, 533, 1139
BstMBI GATC 4 cut(s) 478, 880, 1234, 1318
BstMCI CGRYCG 1 cut(s) 20
BstMWI GCNNNNNNNGC 2 cut(s) 457, 1056
BstNI CCWGG 3 cut(s) 575, 787, 802
BstNSI RCATGY 1 cut(s) 595
BstSCI CCNGG 3 cut(s) 573, 785, 800
BstSFI CTRYAG 1 cut(s) 623
BstSLI GKGCMC 1 cut(s) 552
BstUI CGCG 3 cut(s) 16, 137, 248
BstV1I GCAGC 1 cut(s) 1324
BstV2I GAAGAC 1 cut(s) 833
BstX2I RGATCY 1 cut(s) 880
BstXI CCANNNNNNTGG 1 cut(s) 88
BstYI RGATCY 1 cut(s) 880
BstZI CGGCCG 1 cut(s) 17
BsuRI GGCC 2 cut(s) 19, 260
BtsCI GGATG 2 cut(s) 841, 1072
BtsI GCAGTG 2 cut(s) 35, 315
BtsIMutI CAGTG 3 cut(s) 35, 261, 315
BveI ACCTGC 2 cut(s) 616, 1248
Cac8I GCNNGC 4 cut(s) 681, 1294, 1298, 1335
CaiI CAGNNNCTG 1 cut(s) 1103
CciI TCATGA 1 cut(s) 715
CfoI GCGC 3 cut(s) 16, 42, 248
Cfr10I RCCGGY 1 cut(s) 1292
CseI GACGC 4 cut(s) 143, 502, 1232, 1268
Csp6I GTAC 2 cut(s) 960, 980
CspCI CAANNNNNGTGG 2 cut(s) 1065, 1100
CviAII CATG 4 cut(s) 476, 592, 716, 778
CviQI GTAC 2 cut(s) 960, 980
DdeI CTNAG 4 cut(s) 255, 372, 675, 759
DpnI GATC 4 cut(s) 480, 882, 1236, 1320
DpnII GATC 4 cut(s) 478, 880, 1234, 1318
DraI TTTAAA 1 cut(s) 1350
EaeI YGGCCR 1 cut(s) 17
EagI CGGCCG 1 cut(s) 17
Eam1104I CTCTTC 3 cut(s) 275, 648, 1176
EarI CTCTTC 3 cut(s) 275, 648, 1176
Ecl136II GAGCTC 1 cut(s) 993
EclXI CGGCCG 1 cut(s) 17
Eco130I CCWWGG 1 cut(s) 1278
Eco24I GRGCYC 2 cut(s) 453, 995
Eco31I GGTCTC 2 cut(s) 533, 1139
Eco52I CGGCCG 1 cut(s) 17
Eco53kI GAGCTC 1 cut(s) 993
Eco57I CTGAAG 6 cut(s) 316, 539, 672, 1080, 1125, 1242
EcoICRI GAGCTC 1 cut(s) 993
EcoRII CCWGG 3 cut(s) 573, 785, 800
EcoT14I CCWWGG 1 cut(s) 1278
EcoT38I GRGCYC 2 cut(s) 453, 995
ErhI CCWWGG 1 cut(s) 1278
FaeI CATG 4 cut(s) 479, 595, 719, 781
FaqI GGGAC 2 cut(s) 146, 1271
FatI CATG 4 cut(s) 475, 591, 715, 777
FauI CCCGC 1 cut(s) 241
FblI GTMKAC 2 cut(s) 559, 918
Fnu4HI GCNGC 3 cut(s) 17, 224, 1338
FokI GGATG 2 cut(s) 848, 1079
FriOI GRGCYC 2 cut(s) 453, 995
Fsp4HI GCNGC 3 cut(s) 17, 224, 1338
FspBI CTAG 2 cut(s) 684, 1254
GlaI GCGC 3 cut(s) 15, 41, 247
GluI GCNGC 3 cut(s) 17, 224, 1338
GsuI CTGGAG 3 cut(s) 714, 784, 1031
HaeIII GGCC 2 cut(s) 19, 260
HapII CCGG 3 cut(s) 31, 497, 1293
HgaI GACGC 4 cut(s) 143, 502, 1232, 1268
HhaI GCGC 3 cut(s) 16, 42, 248
Hin1I GRCGYC 1 cut(s) 494
Hin1II CATG 4 cut(s) 479, 595, 719, 781
Hin6I GCGC 3 cut(s) 14, 40, 246
HinP1I GCGC 3 cut(s) 14, 40, 246
HincII GTYRAC 1 cut(s) 199
HindII GTYRAC 1 cut(s) 199
HinfI GANTC 4 cut(s) 583, 965, 1100, 1133
HpaI GTTAAC 1 cut(s) 199
HpaII CCGG 3 cut(s) 31, 497, 1293
HphI GGTGA 6 cut(s) 104, 278, 639, 646, 774, 1229
Hpy166II GTNNAC 5 cut(s) 199, 560, 919, 980, 982
Hpy188I TCNGA 9 cut(s) 457, 466, 519, 588, 676, 1099, 1105, 1117, 1138
Hpy188III TCNNGA 3 cut(s) 482, 716, 884
Hpy8I GTNNAC 5 cut(s) 199, 560, 919, 980, 982
HpyAV CCTTC 5 cut(s) 53, 802, 1135, 1150, 1261
HpyCH4V TGCA 8 cut(s) 4, 105, 149, 537, 595, 601, 625, 929
HpyF10VI GCNNNNNNNGC 2 cut(s) 457, 1056
HpyF3I CTNAG 4 cut(s) 255, 372, 675, 759
Hsp92I GRCGYC 1 cut(s) 494
Hsp92II CATG 4 cut(s) 479, 595, 719, 781
HspAI GCGC 3 cut(s) 14, 40, 246
KroI GCCGGC 1 cut(s) 1292
KroNI GCCGGC 1 cut(s) 1294
KspAI GTTAAC 1 cut(s) 199
Kzo9I GATC 4 cut(s) 478, 880, 1234, 1318
LmnI GCTCC 6 cut(s) 193, 220, 457, 990, 998, 1047
Lsp1109I GCAGC 1 cut(s) 1324
LweI GCATC 1 cut(s) 1279
MaeI CTAG 2 cut(s) 684, 1254
MaeIII GTNAC 3 cut(s) 33, 780, 790
MalI GATC 4 cut(s) 480, 882, 1236, 1320
MboI GATC 4 cut(s) 478, 880, 1234, 1318
MflI RGATCY 1 cut(s) 880
MhlI GDGCHC 6 cut(s) 210, 453, 552, 708, 901, 995
MluCI AATT 4 cut(s) 232, 381, 732, 1303
MlyI GAGTC 2 cut(s) 1094, 1127
MmeI TCCRAC 2 cut(s) 141, 791
MroNI GCCGGC 1 cut(s) 1292
MroXI GAANNNNTTC 2 cut(s) 641, 1194
MseI TTAA 5 cut(s) 198, 395, 660, 689, 1349
MspA1I CMGCKG 1 cut(s) 226
MspI CCGG 3 cut(s) 31, 497, 1293
MspR9I CCNGG 3 cut(s) 575, 787, 802
Mva1269I GAATGC 1 cut(s) 711
MvaI CCWGG 3 cut(s) 575, 787, 802
MvnI CGCG 3 cut(s) 16, 137, 248
MwoI GCNNNNNNNGC 2 cut(s) 457, 1056
NaeI GCCGGC 1 cut(s) 1294
NdeII GATC 4 cut(s) 478, 880, 1234, 1318
NgoMIV GCCGGC 1 cut(s) 1292
NlaIII CATG 4 cut(s) 479, 595, 719, 781
NlaIV GGNNCC 3 cut(s) 189, 222, 459
NmeAIII GCCGAG 2 cut(s) 45, 687
NmuCI GTSAC 3 cut(s) 33, 780, 790
NspI RCATGY 1 cut(s) 595
PagI TCATGA 1 cut(s) 715
PaqCI CACCTGC 2 cut(s) 616, 1248
PasI CCCWGGG 1 cut(s) 786
PctI GAATGC 1 cut(s) 711
PdiI GCCGGC 1 cut(s) 1294
PdmI GAANNNNTTC 2 cut(s) 641, 1194
PfeI GAWTC 2 cut(s) 583, 965
PfoI TCCNGGA 1 cut(s) 800
PkrI GCNGC 3 cut(s) 18, 225, 1339
PleI GAGTC 2 cut(s) 1094, 1127
PpsI GAGTC 2 cut(s) 1094, 1127
Psp124BI GAGCTC 1 cut(s) 995
Psp6I CCWGG 3 cut(s) 573, 785, 800
PspGI CCWGG 3 cut(s) 573, 785, 800
PspN4I GGNNCC 3 cut(s) 189, 222, 459
PstI CTGCAG 1 cut(s) 627
PstNI CAGNNNCTG 1 cut(s) 1103
PsuI RGATCY 1 cut(s) 880
RsaI GTAC 2 cut(s) 961, 981
RsaNI GTAC 2 cut(s) 960, 980
SacI GAGCTC 1 cut(s) 995
SaqAI TTAA 5 cut(s) 198, 395, 660, 689, 1349
SatI GCNGC 3 cut(s) 17, 224, 1338
Sau3AI GATC 4 cut(s) 478, 880, 1234, 1318
SchI GAGTC 2 cut(s) 1094, 1127
ScrFI CCNGG 3 cut(s) 575, 787, 802
SduI GDGCHC 6 cut(s) 210, 453, 552, 708, 901, 995
SfaNI GCATC 1 cut(s) 1279
SfcI CTRYAG 1 cut(s) 623
SmlI CTYRAG 4 cut(s) 293, 323, 530, 884
SmoI CTYRAG 4 cut(s) 293, 323, 530, 884
Sse9I AATT 4 cut(s) 232, 381, 732, 1303
SsiI CCGC 4 cut(s) 16, 137, 224, 248
SspI AATATT 1 cut(s) 489
SspMI CTAG 2 cut(s) 684, 1254
SstI GAGCTC 1 cut(s) 995
StyD4I CCNGG 3 cut(s) 573, 785, 800
StyI CCWWGG 1 cut(s) 1278
TaqI TCGA 6 cut(s) 114, 481, 824, 844, 895, 1321
TaqII GACCGA 1 cut(s) 1163
TasI AATT 4 cut(s) 232, 381, 732, 1303
TatI WGTACW 1 cut(s) 979
TauI GCSGC 2 cut(s) 19, 226
TfiI GAWTC 2 cut(s) 583, 965
Tru1I TTAA 5 cut(s) 198, 395, 660, 689, 1349
Tru9I TTAA 5 cut(s) 198, 395, 660, 689, 1349
TscAI CASTG 3 cut(s) 42, 268, 315
TseFI GTSAC 3 cut(s) 33, 780, 790
TseI GCWGC 1 cut(s) 1337
Tsp45I GTSAC 3 cut(s) 33, 780, 790
TspDTI ATGAA 5 cut(s) 132, 170, 704, 732, 1326
TspGWI ACGGA 2 cut(s) 147, 180
TspRI CASTG 3 cut(s) 42, 268, 315
XapI RAATTY 3 cut(s) 232, 381, 1303
XceI RCATGY 1 cut(s) 595
XmiI GTMKAC 2 cut(s) 559, 918
XmnI GAANNNNTTC 2 cut(s) 641, 1194
XspI CTAG 2 cut(s) 684, 1254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.