PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24715 AT3G24715 AT3G24715 |
| fragaria_vesca | FvH4_2g19501 |
| malus_domestica | MD05G1179200.v1.1 MD10G1168800.v1.1 |
| prunus_persica | Prupe.8G206500_v2.0.a1 |
| pyrus_communis | pycom05g16570 pycom10g14550 |
| rosa_chinensis | RchiOBHm_Chr6g0285191 |
| rosa_laevigata | RLG00000012662 |
| rosa_multiflora | Rmu_co8416369.1_g000001 Rmu_sc0005710.1_g000005 Rmu_sc0006801.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00183430 |
| rosa_rugosa | Rorug06G0173200 |
| rosa_samantha | Rh6AG283200 Rh6BG284500 Rh6CG285900 Rh6DG278900 |
| rosa_wichuraiana | Rw0G000360 Rw6G024400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 252, 1305, 2924, 3263 |
| AarI | CACCTGC | 1 cut(s) | 2008 |
| Acc36I | ACCTGC | 3 cut(s) | 3, 1289, 2008 |
| Acc65I | GGTACC | 1 cut(s) | 3760 |
| AccB1I | GGYRCC | 4 cut(s) | 1697, 3463, 3584, 3760 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1123 |
| AccII | CGCG | 1 cut(s) | 3569 |
| AciI | CCGC | 4 cut(s) | 1375, 1395, 2381, 2998 |
| AclI | AACGTT | 1 cut(s) | 3637 |
| AcoI | YGGCCR | 2 cut(s) | 1345, 3698 |
| AcuI | CTGAAG | 5 cut(s) | 155, 658, 1041, 2289, 3734 |
| AcvI | CACGTG | 1 cut(s) | 1208 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 629, 763, 1123, 1986, 2006, 3594, 3654 |
| AjiI | CACGTC | 1 cut(s) | 2378 |
| AjnI | CCWGG | 6 cut(s) | 52, 617, 1224, 1342, 2258, 2716 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 222, 254, 3439, 3471 |
| Alw21I | GWGCWC | 1 cut(s) | 2603 |
| Alw26I | GTCTC | 7 cut(s) | 352, 650, 853, 1970, 2548, 2623, 2847 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2222, 2822 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2145, 2177 |
| Asp718I | GGTACC | 1 cut(s) | 3760 |
| AspA2I | CCTAGG | 1 cut(s) | 989 |
| AspLEI | GCGC | 2 cut(s) | 3097, 3220 |
| AspS9I | GGNCC | 6 cut(s) | 15, 56, 488, 2256, 2354, 2841 |
| AsuC2I | CCSGG | 2 cut(s) | 476, 3494 |
| AsuHPI | GGTGA | 9 cut(s) | 364, 899, 1439, 1886, 1989, 2243, 2783, 2858, 3672 |
| AvaII | GGWCC | 1 cut(s) | 15 |
| AvrII | CCTAGG | 1 cut(s) | 989 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3411, 3444 |
| BalI | TGGCCA | 1 cut(s) | 1347 |
| BamHI | GGATCC | 2 cut(s) | 72, 1954 |
| BanI | GGYRCC | 4 cut(s) | 1697, 3463, 3584, 3760 |
| BanII | GRGCYC | 3 cut(s) | 1643, 2183, 2603 |
| BauI | CACGAG | 2 cut(s) | 688, 2176 |
| BbrPI | CACGTG | 1 cut(s) | 1208 |
| BbsI | GAAGAC | 2 cut(s) | 1807, 2700 |
| Bbv12I | GWGCWC | 1 cut(s) | 2603 |
| BbvCI | CCTCAGC | 1 cut(s) | 1752 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1774, 1808, 3360, 3394 |
| BciT130I | CCWGG | 6 cut(s) | 54, 619, 1226, 1344, 2260, 2718 |
| BclI | TGATCA | 1 cut(s) | 2197 |
| BcnI | CCSGG | 2 cut(s) | 476, 3494 |
| BcoDI | GTCTC | 7 cut(s) | 352, 650, 853, 1970, 2548, 2623, 2847 |
| BfaI | CTAG | 8 cut(s) | 624, 984, 990, 1128, 1284, 2058, 2295, 3347 |
| BfmI | CTRYAG | 3 cut(s) | 1296, 2085, 3180 |
| BfuAI | ACCTGC | 3 cut(s) | 3, 1289, 2008 |
| BglII | AGATCT | 2 cut(s) | 2329, 3543 |
| BlnI | CCTAGG | 1 cut(s) | 989 |
| BlpI | GCTNAGC | 1 cut(s) | 8 |
| BmcAI | AGTACT | 1 cut(s) | 2293 |
| Bme1390I | CCNGG | 8 cut(s) | 54, 476, 619, 1226, 1344, 2260, 2718, 3494 |
| Bme18I | GGWCC | 1 cut(s) | 15 |
| BmgBI | CACGTC | 1 cut(s) | 2378 |
| BmgT120I | GGNCC | 6 cut(s) | 15, 56, 488, 2256, 2354, 2841 |
| BmrFI | CCNGG | 8 cut(s) | 54, 476, 619, 1226, 1344, 2260, 2718, 3494 |
| BmrI | ACTGGG | 2 cut(s) | 1328, 3561 |
| BmuI | ACTGGG | 2 cut(s) | 1328, 3561 |
| BpiI | GAAGAC | 2 cut(s) | 1807, 2700 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3349, 3381 |
| BpmI | CTGGAG | 1 cut(s) | 3106 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1752 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 8 |
| BpuEI | CTTGAG | 1 cut(s) | 3376 |
| BpuMI | CCSGG | 2 cut(s) | 476, 3494 |
| BsaAI | YACGTR | 1 cut(s) | 1208 |
| BsaBI | GATNNNNATC | 2 cut(s) | 801, 1554 |
| BsaI | GGTCTC | 3 cut(s) | 853, 1970, 2548 |
| BsaJI | CCNNGG | 7 cut(s) | 159, 617, 829, 863, 989, 1225, 3455 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1462, 1492, 2698, 2728 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 629, 763, 1123, 1986, 2006, 3594, 3654 |
| Bse118I | RCCGGY | 1 cut(s) | 2843 |
| Bse1I | ACTGG | 8 cut(s) | 292, 1323, 1457, 1809, 1898, 2011, 2725, 3556 |
| Bse3DI | GCAATG | 3 cut(s) | 1679, 2886, 3276 |
| Bse8I | GATNNNNATC | 2 cut(s) | 801, 1554 |
| BseBI | CCWGG | 6 cut(s) | 54, 619, 1226, 1344, 2260, 2718 |
| BseDI | CCNNGG | 7 cut(s) | 159, 617, 829, 863, 989, 1225, 3455 |
| BseJI | GATNNNNATC | 2 cut(s) | 801, 1554 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 629, 763, 1123, 1986, 2006, 3594, 3654 |
| BseMI | GCAATG | 3 cut(s) | 1679, 2886, 3276 |
| BseNI | ACTGG | 8 cut(s) | 292, 1323, 1457, 1809, 1898, 2011, 2725, 3556 |
| BseRI | GAGGAG | 4 cut(s) | 319, 836, 1191, 1470 |
| BseYI | CCCAGC | 2 cut(s) | 268, 1382 |
| BsgI | GTGCAG | 1 cut(s) | 2358 |
| Bsh1236I | CGCG | 1 cut(s) | 3569 |
| BshNI | GGYRCC | 4 cut(s) | 1697, 3463, 3584, 3760 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2603 |
| BsiSI | CCGG | 4 cut(s) | 475, 2844, 3493, 3697 |
| BslFI | GGGAC | 5 cut(s) | 505, 1336, 2002, 2233, 2767 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 629, 763, 1123, 1986, 2006, 3594, 3654 |
| BsmAI | GTCTC | 7 cut(s) | 352, 650, 853, 1970, 2548, 2623, 2847 |
| BsmFI | GGGAC | 5 cut(s) | 505, 1336, 2002, 2233, 2767 |
| BsmI | GAATGC | 4 cut(s) | 2302, 2590, 3134, 3301 |
| Bso31I | GGTCTC | 3 cut(s) | 853, 1970, 2548 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1643, 2183, 2603 |
| Bsp1407I | TGTACA | 2 cut(s) | 118, 136 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 8 |
| Bsp19I | CCATGG | 2 cut(s) | 159, 829 |
| BspACI | CCGC | 4 cut(s) | 1375, 1395, 2381, 2998 |
| BspFNI | CGCG | 1 cut(s) | 3569 |
| BspHI | TCATGA | 1 cut(s) | 1447 |
| BspMAI | CTGCAG | 2 cut(s) | 1300, 2089 |
| BspMI | ACCTGC | 3 cut(s) | 3, 1289, 2008 |
| BspQI | GCTCTTC | 1 cut(s) | 690 |
| BspT107I | GGYRCC | 4 cut(s) | 1697, 3463, 3584, 3760 |
| BspTNI | GGTCTC | 3 cut(s) | 853, 1970, 2548 |
| BsrDI | GCAATG | 3 cut(s) | 1679, 2886, 3276 |
| BsrFI | RCCGGY | 1 cut(s) | 2843 |
| BsrGI | TGTACA | 2 cut(s) | 118, 136 |
| BsrI | ACTGG | 8 cut(s) | 292, 1323, 1457, 1809, 1898, 2011, 2725, 3556 |
| BssAI | RCCGGY | 1 cut(s) | 2843 |
| BssECI | CCNNGG | 7 cut(s) | 159, 617, 829, 863, 989, 1225, 3455 |
| BssSI | CACGAG | 2 cut(s) | 688, 2176 |
| BssT1I | CCWWGG | 4 cut(s) | 159, 829, 989, 3455 |
| Bst2BI | CACGAG | 2 cut(s) | 688, 2176 |
| Bst2UI | CCWGG | 6 cut(s) | 54, 619, 1226, 1344, 2260, 2718 |
| Bst4CI | ACNGT | 9 cut(s) | 1001, 1327, 1622, 2461, 2489, 2980, 3181, 3248, 3672 |
| Bst6I | CTCTTC | 4 cut(s) | 187, 690, 3456, 3621 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3275 |
| BstAUI | TGTACA | 2 cut(s) | 118, 136 |
| BstBAI | YACGTR | 1 cut(s) | 1208 |
| BstC8I | GCNNGC | 4 cut(s) | 2902, 2915, 3216, 3732 |
| BstDSI | CCRYGG | 3 cut(s) | 159, 829, 863 |
| BstEII | GGTNACC | 1 cut(s) | 3678 |
| BstFNI | CGCG | 1 cut(s) | 3569 |
| BstHHI | GCGC | 2 cut(s) | 3097, 3220 |
| BstMAI | GTCTC | 7 cut(s) | 352, 650, 853, 1970, 2548, 2623, 2847 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 841, 1133, 1383, 1400, 2885, 2910, 3182, 3275, 3752 |
| BstNI | CCWGG | 6 cut(s) | 54, 619, 1226, 1344, 2260, 2718 |
| BstNSI | RCATGY | 3 cut(s) | 1574, 1859, 3218 |
| BstPI | GGTNACC | 1 cut(s) | 3678 |
| BstSCI | CCNGG | 8 cut(s) | 52, 474, 617, 1224, 1342, 2258, 2716, 3492 |
| BstSFI | CTRYAG | 3 cut(s) | 1296, 2085, 3180 |
| BstUI | CGCG | 1 cut(s) | 3569 |
| BstV2I | GAAGAC | 2 cut(s) | 1807, 2700 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1355 |
| BtgI | CCRYGG | 3 cut(s) | 159, 829, 863 |
| BtgZI | GCGATG | 1 cut(s) | 642 |
| BtrI | CACGTC | 1 cut(s) | 2378 |
| BtsI | GCAGTG | 1 cut(s) | 1293 |
| BtsIMutI | CAGTG | 7 cut(s) | 1293, 1316, 2004, 2494, 2685, 3677, 3708 |
| BveI | ACCTGC | 3 cut(s) | 3, 1289, 2008 |
| Cac8I | GCNNGC | 4 cut(s) | 2902, 2915, 3216, 3732 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2222, 2822 |
| CciI | TCATGA | 1 cut(s) | 1447 |
| CfoI | GCGC | 2 cut(s) | 3097, 3220 |
| Cfr10I | RCCGGY | 1 cut(s) | 2843 |
| Cfr13I | GGNCC | 6 cut(s) | 15, 56, 488, 2256, 2354, 2841 |
| CseI | GACGC | 2 cut(s) | 2055, 2885 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1993, 2028, 2781, 2816 |
| DraI | TTTAAA | 1 cut(s) | 2533 |
| EaeI | YGGCCR | 2 cut(s) | 1345, 3698 |
| Eam1104I | CTCTTC | 4 cut(s) | 187, 690, 3456, 3621 |
| EarI | CTCTTC | 4 cut(s) | 187, 690, 3456, 3621 |
| Ecl136II | GAGCTC | 1 cut(s) | 2601 |
| Eco130I | CCWWGG | 4 cut(s) | 159, 829, 989, 3455 |
| Eco147I | AGGCCT | 2 cut(s) | 622, 1492 |
| Eco24I | GRGCYC | 3 cut(s) | 1643, 2183, 2603 |
| Eco31I | GGTCTC | 3 cut(s) | 853, 1970, 2548 |
| Eco47I | GGWCC | 1 cut(s) | 15 |
| Eco53kI | GAGCTC | 1 cut(s) | 2601 |
| Eco57I | CTGAAG | 5 cut(s) | 155, 658, 1041, 2289, 3734 |
| Eco72I | CACGTG | 1 cut(s) | 1208 |
| Eco91I | GGTNACC | 1 cut(s) | 3678 |
| EcoICRI | GAGCTC | 1 cut(s) | 2601 |
| EcoO65I | GGTNACC | 1 cut(s) | 3678 |
| EcoRI | GAATTC | 2 cut(s) | 2263, 3188 |
| EcoRII | CCWGG | 6 cut(s) | 52, 617, 1224, 1342, 2258, 2716 |
| EcoT14I | CCWWGG | 4 cut(s) | 159, 829, 989, 3455 |
| EcoT22I | ATGCAT | 1 cut(s) | 3579 |
| EcoT38I | GRGCYC | 3 cut(s) | 1643, 2183, 2603 |
| ErhI | CCWWGG | 4 cut(s) | 159, 829, 989, 3455 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 436, 468 |
| FaqI | GGGAC | 5 cut(s) | 505, 1336, 2002, 2233, 2767 |
| FauI | CCCGC | 1 cut(s) | 2991 |
| FauNDI | CATATG | 2 cut(s) | 2971, 3783 |
| FbaI | TGATCA | 1 cut(s) | 2197 |
| FriOI | GRGCYC | 3 cut(s) | 1643, 2183, 2603 |
| FspBI | CTAG | 8 cut(s) | 624, 984, 990, 1128, 1284, 2058, 2295, 3347 |
| GlaI | GCGC | 2 cut(s) | 3096, 3219 |
| GsaI | CCCAGC | 2 cut(s) | 272, 1386 |
| GsuI | CTGGAG | 1 cut(s) | 3106 |
| HapII | CCGG | 4 cut(s) | 475, 2844, 3493, 3697 |
| HgaI | GACGC | 2 cut(s) | 2055, 2885 |
| HhaI | GCGC | 2 cut(s) | 3097, 3220 |
| Hin6I | GCGC | 2 cut(s) | 3095, 3218 |
| HinP1I | GCGC | 2 cut(s) | 3095, 3218 |
| HincII | GTYRAC | 5 cut(s) | 394, 1031, 1216, 2457, 3352 |
| HindII | GTYRAC | 5 cut(s) | 394, 1031, 1216, 2457, 3352 |
| HindIII | AAGCTT | 1 cut(s) | 3257 |
| HpaI | GTTAAC | 1 cut(s) | 1216 |
| HpaII | CCGG | 4 cut(s) | 475, 2844, 3493, 3697 |
| HphI | GGTGA | 9 cut(s) | 364, 899, 1439, 1886, 1989, 2243, 2783, 2858, 3672 |
| Hpy166II | GTNNAC | 8 cut(s) | 121, 394, 1031, 1216, 1625, 2234, 2457, 3352 |
| Hpy8I | GTNNAC | 8 cut(s) | 121, 394, 1031, 1216, 1625, 2234, 2457, 3352 |
| Hpy99I | CGWCG | 1 cut(s) | 3252 |
| HpyAV | CCTTC | 8 cut(s) | 442, 682, 1158, 1418, 1625, 1932, 1973, 3499 |
| HpyCH4III | ACNGT | 9 cut(s) | 1001, 1327, 1622, 2461, 2489, 2980, 3181, 3248, 3672 |
| HpyCH4IV | ACGT | 5 cut(s) | 1207, 2377, 2697, 3170, 3637 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 841, 1133, 1383, 1400, 2885, 2910, 3182, 3275, 3752 |
| HpySE526I | ACGT | 5 cut(s) | 1207, 2377, 2697, 3170, 3637 |
| HspAI | GCGC | 2 cut(s) | 3095, 3218 |
| KpnI | GGTACC | 1 cut(s) | 3764 |
| Ksp22I | TGATCA | 1 cut(s) | 2197 |
| KspAI | GTTAAC | 1 cut(s) | 1216 |
| LguI | GCTCTTC | 1 cut(s) | 690 |
| LmnI | GCTCC | 2 cut(s) | 759, 3158 |
| MaeI | CTAG | 8 cut(s) | 624, 984, 990, 1128, 1284, 2058, 2295, 3347 |
| MaeII | ACGT | 5 cut(s) | 1207, 2377, 2697, 3170, 3637 |
| MfeI | CAATTG | 1 cut(s) | 1673 |
| MhlI | GDGCHC | 3 cut(s) | 1643, 2183, 2603 |
| MlsI | TGGCCA | 1 cut(s) | 1347 |
| MluNI | TGGCCA | 1 cut(s) | 1347 |
| MlyI | GAGTC | 4 cut(s) | 527, 1790, 2684, 2828 |
| MmeI | TCCRAC | 6 cut(s) | 220, 537, 555, 2167, 2652, 3367 |
| Mox20I | TGGCCA | 1 cut(s) | 1347 |
| Mph1103I | ATGCAT | 1 cut(s) | 3579 |
| MscI | TGGCCA | 1 cut(s) | 1347 |
| MslI | CAYNNNNRTG | 4 cut(s) | 126, 1971, 3123, 3582 |
| Msp20I | TGGCCA | 1 cut(s) | 1347 |
| MspA1I | CMGCKG | 2 cut(s) | 268, 1756 |
| MspI | CCGG | 4 cut(s) | 475, 2844, 3493, 3697 |
| MspR9I | CCNGG | 8 cut(s) | 54, 476, 619, 1226, 1344, 2260, 2718, 3494 |
| MunI | CAATTG | 1 cut(s) | 1673 |
| Mva1269I | GAATGC | 4 cut(s) | 2302, 2590, 3134, 3301 |
| MvaI | CCWGG | 6 cut(s) | 54, 619, 1226, 1344, 2260, 2718 |
| MvnI | CGCG | 1 cut(s) | 3569 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 841, 1133, 1383, 1400, 2885, 2910, 3182, 3275, 3752 |
| NciI | CCSGG | 2 cut(s) | 476, 3494 |
| NcoI | CCATGG | 2 cut(s) | 159, 829 |
| NdeI | CATATG | 2 cut(s) | 2971, 3783 |
| NmuCI | GTSAC | 8 cut(s) | 205, 1367, 2173, 2489, 2873, 3204, 3335, 3678 |
| NsiI | ATGCAT | 1 cut(s) | 3579 |
| NspI | RCATGY | 3 cut(s) | 1574, 1859, 3218 |
| PaeI | GCATGC | 1 cut(s) | 3218 |
| PagI | TCATGA | 1 cut(s) | 1447 |
| PaqCI | CACCTGC | 1 cut(s) | 2008 |
| PceI | AGGCCT | 2 cut(s) | 622, 1492 |
| PciSI | GCTCTTC | 1 cut(s) | 690 |
| PctI | GAATGC | 4 cut(s) | 2302, 2590, 3134, 3301 |
| PflFI | GACNNNGTC | 1 cut(s) | 1365 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1123 |
| PleI | GAGTC | 4 cut(s) | 526, 1789, 2683, 2827 |
| PmaCI | CACGTG | 1 cut(s) | 1208 |
| PmlI | CACGTG | 1 cut(s) | 1208 |
| PpsI | GAGTC | 4 cut(s) | 526, 1789, 2683, 2827 |
| Ppu21I | YACGTR | 1 cut(s) | 1208 |
| PsiI | TTATAA | 4 cut(s) | 252, 1305, 2924, 3263 |
| Psp124BI | GAGCTC | 1 cut(s) | 2603 |
| Psp1406I | AACGTT | 1 cut(s) | 3637 |
| Psp6I | CCWGG | 6 cut(s) | 52, 617, 1224, 1342, 2258, 2716 |
| PspCI | CACGTG | 1 cut(s) | 1208 |
| PspEI | GGTNACC | 1 cut(s) | 3678 |
| PspFI | CCCAGC | 2 cut(s) | 268, 1382 |
| PspGI | CCWGG | 6 cut(s) | 52, 617, 1224, 1342, 2258, 2716 |
| PspPI | GGNCC | 6 cut(s) | 15, 56, 488, 2256, 2354, 2841 |
| PstI | CTGCAG | 2 cut(s) | 1300, 2089 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2222, 2822 |
| PsyI | GACNNNGTC | 1 cut(s) | 1365 |
| PvuII | CAGCTG | 2 cut(s) | 268, 1756 |
| RseI | CAYNNNNRTG | 4 cut(s) | 126, 1971, 3123, 3582 |
| SacI | GAGCTC | 1 cut(s) | 2603 |
| SapI | GCTCTTC | 1 cut(s) | 690 |
| Sau96I | GGNCC | 6 cut(s) | 15, 56, 488, 2256, 2354, 2841 |
| ScaI | AGTACT | 1 cut(s) | 2293 |
| SchI | GAGTC | 4 cut(s) | 527, 1790, 2684, 2828 |
| ScrFI | CCNGG | 8 cut(s) | 54, 476, 619, 1226, 1344, 2260, 2718, 3494 |
| SduI | GDGCHC | 3 cut(s) | 1643, 2183, 2603 |
| SfcI | CTRYAG | 3 cut(s) | 1296, 2085, 3180 |
| SinI | GGWCC | 1 cut(s) | 15 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 126, 1971, 3123, 3582 |
| SmlI | CTYRAG | 1 cut(s) | 3355 |
| SmoI | CTYRAG | 1 cut(s) | 3355 |
| SphI | GCATGC | 1 cut(s) | 3218 |
| SseBI | AGGCCT | 2 cut(s) | 622, 1492 |
| SsiI | CCGC | 4 cut(s) | 1375, 1395, 2381, 2998 |
| SspI | AATATT | 2 cut(s) | 2167, 3313 |
| SspMI | CTAG | 8 cut(s) | 624, 984, 990, 1128, 1284, 2058, 2295, 3347 |
| SstI | GAGCTC | 1 cut(s) | 2603 |
| StuI | AGGCCT | 2 cut(s) | 622, 1492 |
| StyD4I | CCNGG | 8 cut(s) | 52, 474, 617, 1224, 1342, 2258, 2716, 3492 |
| StyI | CCWWGG | 4 cut(s) | 159, 829, 989, 3455 |
| TaaI | ACNGT | 9 cut(s) | 1001, 1327, 1622, 2461, 2489, 2980, 3181, 3248, 3672 |
| TaiI | ACGT | 5 cut(s) | 1210, 2380, 2700, 3173, 3640 |
| TaqI | TCGA | 6 cut(s) | 1737, 1784, 2603, 3067, 3404, 3619 |
| TatI | WGTACW | 3 cut(s) | 118, 136, 2291 |
| TauI | GCSGC | 1 cut(s) | 1397 |
| TscAI | CASTG | 7 cut(s) | 1300, 1323, 2011, 2494, 2685, 3677, 3715 |
| TseFI | GTSAC | 8 cut(s) | 205, 1367, 2173, 2489, 2873, 3204, 3335, 3678 |
| Tsp45I | GTSAC | 8 cut(s) | 205, 1367, 2173, 2489, 2873, 3204, 3335, 3678 |
| TspGWI | ACGGA | 2 cut(s) | 676, 880 |
| TspRI | CASTG | 7 cut(s) | 1300, 1323, 2011, 2494, 2685, 3677, 3715 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1365 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1123 |
| VpaK11BI | GGWCC | 1 cut(s) | 15 |
| XceI | RCATGY | 3 cut(s) | 1574, 1859, 3218 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 66 |
| XmaJI | CCTAGG | 1 cut(s) | 989 |
| XspI | CTAG | 8 cut(s) | 624, 984, 990, 1128, 1284, 2058, 2295, 3347 |
| ZrmI | AGTACT | 1 cut(s) | 2293 |
| Zsp2I | ATGCAT | 1 cut(s) | 3579 |