pycom10g14550

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0009051
Physical Location & Seq
Reverse (-)
17926770 .. 17929001
2232 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g14550.1

Sequence Viewer

Length: 2232 bp
ATGCAGCTAAGTAGGTCCGAGCACTTGTTTGATACCATGACCAATGAGGTGCCTGGCCCATCAGGTCAATGGATCCAGAGAGAGGCGAAGTTTGTTGTCCCAAAAACAGTAAAGAAGGTACATAAGAATGTCTCTGTACAGACAGGTGAGGAATTTTCCATGGAGTTTCTTCAGGATCGTTGTGCTGCAGGAAGAGTTCCTGCTGTGTCTGATATGGTTGAAAATCGTGAAAATGGGGTTGTGTTGAATTATAATAAGAATAAGCAGCTGGGATATCAGGATTGTACTGGTCTTCTGGGGTTGAGAAGACTGGATTATGAGTGTGCATCTGATACGTCTGAGTTTGTCTCGGCAAAAGGGTTGTGTAAAGATATTGAAAGTGAGGCTTGTGTTGACAAGTTAGGCAGATGCAACAGGGAGGAGGTTGATAGCGGACAAGGATCAAGGAAGGCTATTGGAGAACTGAATGTTGACAGAGTTGGTTTTGGACCAACTTCCTTACCTATATTTATGTCTGAATCCCCTCATTCCAACACTGTCAATGGGTCAGGAGCGGTGGATGGTTCTCAATCTGGGAAGATGAAGTTTCTTTGCAGTTTTGGTGGAAAAATCTTGCCCAGGCCTAGCGATGGAAAACTCAGATATGTTGGGGGAGAGACGCGCATTATTTCCTTCAGGAAAAGTATTTCATGGGAAGAGCTTGTGAAGAAAACTACCAGTTTTTGCAACCAGCCTCATACAATCAAGTACCAGCTCCCAAGTGAGGATCTTGATTCTCTTATATCCATGTCTTCAGTTGAAGATCTTCAAAATATGATGGAGGAGTACCATGGACTCGAAAGGCATGAGGGTTCTCAGAGACCTCGAATCTTTTTGATTCCTTTAGGTGAATCTGAAAACACATCTTCCTTTGAGGTGGATAGCATACAGCAATGTAACCCTGATTACCAGTATGTTGCTGCTGTAAATGGCATGATAGGTCCTAGTCCTAGGAAAAAAAGTGGAGGGCAGAATTCAACTACTGAAGCAAGTCAACAGGGAACCAAGACTGTCCTATTCCCAATGGAGATTAAGAGTGACCTTAAAGCTTTGCATCCCAATCAAATTTTAAGTGAACCCCAGAATATTACTCGATCTGCCATTCAATCTCCCTTTTCTCTAATTCTAAATCAGCGAGGAGGTTCCAAGGGTGTTCATTTACAATCACATGGTCTAAACTCTTGCCAGGGTAGTAATGAGAGTAGCAGTTCTTTTATAAGTGCTCAACCACCACAAGAGAACTCCAGCAATAGCACGGAAGGTTATAAAATTCATCCACAGGGGGCAGTAACTGTTATGGACTATCACCACCCTTATAAGCAAGCTGATGATGCTCAACCGGGCCAATACCATGGAGGACATAGTCTCAACCACAATCCCGGCAAGGATCCCATGTCTACTTTAGCTGGCGGTCAAAAGGTTGGTGATTTTGATGGATTCTCCCGTGAGAAGCCAGTGCATGAGGAAAGAATATGTCCTCCTGAGCCTATCTCACACCAAGAAGATTCAAAGATTATGTTGTCAGAATCTAATGATTATGTTGATTGTCATCGTGGCATGCATCATGCGTATTCGGATTCAAAACTGCATGAGAATGGAGGGAGGTCTGTATACTGTTCACAAGAAGGAATAAGCTCGTTGTCCCCCTTAAGTTTTGCAAAGGCTCAATCGTCATTGCTGCTGAACTCAGGTATTTCACAAGAAAAGCGGACCATACTGCATGACAATATTGAATCTTTGAATCCTCGGTTACACAACCAGTTACATGGTATGGAGTTGATAGGATTGCAGAGCAGACTGGATTTGCCGAATTCATCTCCATGTTTAGAATCACTGGGCAAGGATGAACATACTCCCAAATGTAATGGTGGTTTTCATGAAAAATACCGGACAGCTAAAAAGAAAGATTCTCTGACTTTGGAGCTGACGAAGAAGGTCAATCAAAAGGATCCCTTCTTACATCAAGATGAAACCCTTTATGGGACAAGATCACCTGCCACTGGAGTTGATTATCGGAATGGATTTCCTAATATTATTCCCAACCCATCATCTACTTTTGCCTCTGGGGTTGTTGTTCCTGAAGCAATTAATTTGAAACTGTTGGTAAACAACAAGGTGGAGGATTCACAAAGCTTCCAGTGCGACAAAACCCCTGCTGATCGTTCTTGTCACGAGTCAAAGAACTGCCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
ko04010 map04010
Pfam Domains
Protein Families
PB1 Pkinase_Tyr

Protein Analysis

744

Amino Acids

81.92

Weight (kDa)

6.18

Isoelectric Point (pI)

52.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 210 - 292 1.3e-18 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 252, 1256, 1305, 1356
AarI CACCTGC 1 cut(s) 2041
Acc36I ACCTGC 1 cut(s) 2041
AccB1I GGYRCC 1 cut(s) 49
AccBSI CCGCTC 1 cut(s) 554
AccI GTMKAC 2 cut(s) 1436, 1650
AccII CGCG 1 cut(s) 661
AciI CCGC 4 cut(s) 432, 554, 1449, 1747
AclWI GGATC 9 cut(s) 67, 80, 183, 448, 774, 1421, 1434, 1982, 1995
AcsI RAATTY 5 cut(s) 152, 1012, 1104, 1308, 1849
AcuI CTGAAG 5 cut(s) 155, 658, 777, 1044, 2139
AfaI GTAC 5 cut(s) 120, 138, 286, 749, 827
AfiI CCNNNNNNNGG 5 cut(s) 82, 629, 763, 2019, 2039
AflII CTTAAG 1 cut(s) 1687
AjnI CCWGG 3 cut(s) 52, 617, 1224
Alw21I GWGCWC 2 cut(s) 24, 1264
Alw26I GTCTC 5 cut(s) 136, 352, 650, 853, 1409
AlwI GGATC 9 cut(s) 67, 80, 183, 448, 774, 1421, 1434, 1982, 1995
AlwNI CAGNNNCTG 1 cut(s) 1331
AoxI GGCC 3 cut(s) 55, 620, 1381
ApeKI GCWGC 5 cut(s) 4, 185, 265, 959, 1717
ApoI RAATTY 5 cut(s) 152, 1012, 1104, 1308, 1849
AseI ATTAAT 1 cut(s) 2127
Asp700I GAANNNNTTC 1 cut(s) 804
AspA2I CCTAGG 1 cut(s) 989
AspLEI GCGC 1 cut(s) 663
AspS9I GGNCC 6 cut(s) 15, 56, 488, 980, 1381, 1749
AsuC2I CCSGG 2 cut(s) 1380, 1419
AsuHPI GGTGA 5 cut(s) 158, 899, 1337, 1475, 2022
AvaII GGWCC 4 cut(s) 15, 488, 980, 1749
AvrII CCTAGG 1 cut(s) 989
BamHI GGATCC 3 cut(s) 72, 1426, 1987
BanI GGYRCC 1 cut(s) 49
BauI CACGAG 1 cut(s) 2210
BbsI GAAGAC 3 cut(s) 284, 313, 783
Bbv12I GWGCWC 2 cut(s) 24, 1264
BbvI GCAGC 5 cut(s) 16, 172, 277, 946, 1704
BccI CCATC 6 cut(s) 67, 554, 623, 811, 1466, 2092
BciT130I CCWGG 3 cut(s) 54, 619, 1226
BcnI CCSGG 2 cut(s) 1380, 1419
BcoDI GTCTC 5 cut(s) 136, 352, 650, 853, 1409
BfaI CTAG 3 cut(s) 624, 984, 990
BfmI CTRYAG 1 cut(s) 186
BfrI CTTAAG 1 cut(s) 1687
BfuAI ACCTGC 1 cut(s) 2041
BglII AGATCT 1 cut(s) 802
BisI GCNGC 5 cut(s) 5, 186, 266, 960, 1718
BlnI CCTAGG 1 cut(s) 989
BlsI GCNGC 5 cut(s) 6, 187, 267, 961, 1719
Bme1390I CCNGG 5 cut(s) 54, 619, 1226, 1380, 1419
Bme18I GGWCC 4 cut(s) 15, 488, 980, 1749
BmgT120I GGNCC 6 cut(s) 15, 56, 488, 980, 1381, 1749
BmiI GGNNCC 6 cut(s) 51, 74, 1042, 1183, 1428, 1989
BmrFI CCNGG 5 cut(s) 54, 619, 1226, 1380, 1419
BmrI ACTGGG 1 cut(s) 1883
BmsI GCATC 5 cut(s) 335, 398, 1102, 1360, 1609
BmuI ACTGGG 1 cut(s) 1883
BpiI GAAGAC 3 cut(s) 284, 313, 783
BplI GAGNNNNNCTC 4 cut(s) 332, 364, 1514, 1546
BpmI CTGGAG 2 cut(s) 1267, 2061
Bpu10I CCTNAGC 1 cut(s) 1521
BpuMI CCSGG 2 cut(s) 1380, 1419
BsaBI GATNNNNATC 1 cut(s) 1587
BsaI GGTCTC 1 cut(s) 853
BsaJI CCNNGG 8 cut(s) 159, 617, 829, 989, 1185, 1225, 1390, 1784
BsaWI WCCGGW 1 cut(s) 1926
Bsc4I CCNNNNNNNGG 5 cut(s) 82, 629, 763, 2019, 2039
Bse3DI GCAATG 2 cut(s) 938, 1712
Bse8I GATNNNNATC 1 cut(s) 1587
BseBI CCWGG 3 cut(s) 54, 619, 1226
BseDI CCNNGG 8 cut(s) 159, 617, 829, 989, 1185, 1225, 1390, 1784
BseGI GGATG 4 cut(s) 565, 1093, 1312, 1888
BseJI GATNNNNATC 1 cut(s) 1587
BseLI CCNNNNNNNGG 5 cut(s) 82, 629, 763, 2019, 2039
BseMI GCAATG 2 cut(s) 938, 1712
BseMII CTCAG 5 cut(s) 330, 652, 869, 1512, 1740
BseRI GAGGAG 3 cut(s) 434, 836, 1191
BseXI GCAGC 5 cut(s) 16, 172, 277, 946, 1704
BseYI CCCAGC 1 cut(s) 268
Bsh1236I CGCG 1 cut(s) 661
BshFI GGCC 3 cut(s) 57, 622, 1383
BshNI GGYRCC 1 cut(s) 49
BsiHKAI GWGCWC 2 cut(s) 24, 1264
BsiSI CCGG 3 cut(s) 1379, 1419, 1927
BslFI GGGAC 3 cut(s) 83, 1666, 2035
BslI CCNNNNNNNGG 5 cut(s) 82, 629, 763, 2019, 2039
BsmAI GTCTC 5 cut(s) 136, 352, 650, 853, 1409
BsmBI CGTCTC 1 cut(s) 650
BsmFI GGGAC 3 cut(s) 83, 1666, 2035
BsnI GGCC 3 cut(s) 57, 622, 1383
Bso31I GGTCTC 1 cut(s) 853
Bsp1286I GDGCHC 2 cut(s) 24, 1264
Bsp1407I TGTACA 1 cut(s) 136
Bsp19I CCATGG 3 cut(s) 159, 829, 1390
BspACI CCGC 4 cut(s) 432, 554, 1449, 1747
BspANI GGCC 3 cut(s) 57, 622, 1383
BspCNI CTCAG 5 cut(s) 331, 651, 868, 1513, 1739
BspFNI CGCG 1 cut(s) 661
BspHI TCATGA 1 cut(s) 1915
BspLI GGNNCC 6 cut(s) 51, 74, 1042, 1183, 1428, 1989
BspMAI CTGCAG 1 cut(s) 190
BspMI ACCTGC 1 cut(s) 2041
BspPI GGATC 9 cut(s) 67, 80, 183, 448, 774, 1421, 1434, 1982, 1995
BspQI GCTCTTC 1 cut(s) 690
BspT107I GGYRCC 1 cut(s) 49
BspTI CTTAAG 1 cut(s) 1687
BspTNI GGTCTC 1 cut(s) 853
BsrBI CCGCTC 1 cut(s) 554
BsrDI GCAATG 2 cut(s) 938, 1712
BsrGI TGTACA 1 cut(s) 136
BssECI CCNNGG 8 cut(s) 159, 617, 829, 989, 1185, 1225, 1390, 1784
BssNAI GTATAC 1 cut(s) 1651
BssSI CACGAG 1 cut(s) 2210
BssT1I CCWWGG 5 cut(s) 159, 829, 989, 1185, 1390
Bst1107I GTATAC 1 cut(s) 1651
Bst2BI CACGAG 1 cut(s) 2210
Bst2UI CCWGG 3 cut(s) 54, 619, 1226
Bst4CI ACNGT 6 cut(s) 109, 538, 1051, 1333, 1655, 2139
Bst6I CTCTTC 2 cut(s) 187, 690
BstAFI CTTAAG 1 cut(s) 1687
BstAUI TGTACA 1 cut(s) 136
BstC8I GCNNGC 3 cut(s) 1362, 1447, 1598
BstDEI CTNAG 6 cut(s) 8, 339, 638, 855, 1521, 1726
BstDSI CCRYGG 3 cut(s) 159, 829, 1390
BstF5I GGATG 4 cut(s) 565, 1093, 1312, 1888
BstFNI CGCG 1 cut(s) 661
BstHHI GCGC 1 cut(s) 663
BstMAI GTCTC 5 cut(s) 136, 352, 650, 853, 1409
BstMWI GCNNNNNNNGC 2 cut(s) 1370, 2178
BstNI CCWGG 3 cut(s) 54, 619, 1226
BstNSI RCATGY 1 cut(s) 1600
BstSCI CCNGG 5 cut(s) 52, 617, 1224, 1378, 1417
BstSFI CTRYAG 1 cut(s) 186
BstUI CGCG 1 cut(s) 661
BstV1I GCAGC 5 cut(s) 16, 172, 277, 946, 1704
BstV2I GAAGAC 3 cut(s) 284, 313, 783
BstX2I RGATCY 5 cut(s) 72, 766, 802, 1426, 1987
BstXI CCANNNNNNTGG 2 cut(s) 1391, 1805
BstYI RGATCY 5 cut(s) 72, 766, 802, 1426, 1987
BstZ17I GTATAC 1 cut(s) 1651
BsuRI GGCC 3 cut(s) 57, 622, 1383
BtgI CCRYGG 3 cut(s) 159, 829, 1390
BtgZI GCGATG 1 cut(s) 642
BtsCI GGATG 4 cut(s) 565, 1093, 1312, 1888
BtsIMutI CAGTG 5 cut(s) 534, 1500, 1871, 2037, 2183
BveI ACCTGC 1 cut(s) 2041
Cac8I GCNNGC 3 cut(s) 1362, 1447, 1598
CaiI CAGNNNCTG 1 cut(s) 1331
CciI TCATGA 1 cut(s) 1915
CfoI GCGC 1 cut(s) 663
Cfr13I GGNCC 6 cut(s) 15, 56, 488, 980, 1381, 1749
CseI GACGC 1 cut(s) 667
Csp6I GTAC 5 cut(s) 119, 137, 285, 748, 826
CspCI CAANNNNNGTGG 2 cut(s) 2026, 2061
CviQI GTAC 5 cut(s) 119, 137, 285, 748, 826
DdeI CTNAG 6 cut(s) 8, 339, 638, 855, 1521, 1726
Eam1104I CTCTTC 2 cut(s) 187, 690
EarI CTCTTC 2 cut(s) 187, 690
Eco130I CCWWGG 5 cut(s) 159, 829, 989, 1185, 1390
Eco147I AGGCCT 1 cut(s) 622
Eco31I GGTCTC 1 cut(s) 853
Eco32I GATATC 1 cut(s) 275
Eco47I GGWCC 4 cut(s) 15, 488, 980, 1749
Eco57I CTGAAG 5 cut(s) 155, 658, 777, 1044, 2139
EcoO109I RGGNCCY 1 cut(s) 980
EcoRI GAATTC 2 cut(s) 1012, 1849
EcoRII CCWGG 3 cut(s) 52, 617, 1224
EcoRV GATATC 1 cut(s) 275
EcoT14I CCWWGG 5 cut(s) 159, 829, 989, 1185, 1390
EcoT22I ATGCAT 1 cut(s) 1602
ErhI CCWWGG 5 cut(s) 159, 829, 989, 1185, 1390
Esp3I CGTCTC 1 cut(s) 650
FalI AAGNNNNNCTT 4 cut(s) 370, 402, 1976, 2008
FaqI GGGAC 3 cut(s) 83, 1666, 2035
FblI GTMKAC 2 cut(s) 1436, 1650
Fnu4HI GCNGC 5 cut(s) 5, 186, 266, 960, 1718
FokI GGATG 4 cut(s) 572, 1080, 1299, 1895
Fsp4HI GCNGC 5 cut(s) 5, 186, 266, 960, 1718
FspBI CTAG 3 cut(s) 624, 984, 990
GlaI GCGC 1 cut(s) 662
GluI GCNGC 5 cut(s) 5, 186, 266, 960, 1718
GsaI CCCAGC 1 cut(s) 272
GsuI CTGGAG 2 cut(s) 1267, 2061
HaeIII GGCC 3 cut(s) 57, 622, 1383
HapII CCGG 3 cut(s) 1379, 1419, 1927
HgaI GACGC 1 cut(s) 667
HhaI GCGC 1 cut(s) 663
Hin6I GCGC 1 cut(s) 661
HinP1I GCGC 1 cut(s) 661
HincII GTYRAC 3 cut(s) 394, 472, 1034
HindII GTYRAC 3 cut(s) 394, 472, 1034
HindIII AAGCTT 2 cut(s) 1086, 2170
HpaII CCGG 3 cut(s) 1379, 1419, 1927
HphI GGTGA 5 cut(s) 158, 899, 1337, 1475, 2022
Hpy166II GTNNAC 8 cut(s) 394, 472, 1034, 1115, 1437, 1651, 1658, 2146
Hpy8I GTNNAC 8 cut(s) 394, 472, 1034, 1115, 1437, 1651, 1658, 2146
HpyAV CCTTC 7 cut(s) 109, 442, 682, 1292, 1658, 1966, 2002
HpyCH4III ACNGT 6 cut(s) 109, 538, 1051, 1333, 1655, 2139
HpyCH4IV ACGT 1 cut(s) 335
HpyF10VI GCNNNNNNNGC 2 cut(s) 1370, 2178
HpyF3I CTNAG 6 cut(s) 8, 339, 638, 855, 1521, 1726
HpySE526I ACGT 1 cut(s) 335
HspAI GCGC 1 cut(s) 661
LguI GCTCTTC 1 cut(s) 690
LmnI GCTCC 3 cut(s) 551, 759, 1960
Lsp1109I GCAGC 5 cut(s) 16, 172, 277, 946, 1704
LweI GCATC 5 cut(s) 335, 398, 1102, 1360, 1609
MaeI CTAG 3 cut(s) 624, 984, 990
MaeII ACGT 1 cut(s) 335
MaeIII GTNAC 6 cut(s) 935, 1076, 1327, 1788, 1800, 2207
MbiI CCGCTC 1 cut(s) 554
MflI RGATCY 5 cut(s) 72, 766, 802, 1426, 1987
MhlI GDGCHC 2 cut(s) 24, 1264
MluCI AATT 9 cut(s) 152, 247, 1012, 1104, 1161, 1308, 1849, 2124, 2128
MlyI GAGTC 2 cut(s) 828, 2222
MmeI TCCRAC 1 cut(s) 555
Mph1103I ATGCAT 1 cut(s) 1602
MroXI GAANNNNTTC 1 cut(s) 804
MseI TTAA 5 cut(s) 1071, 1083, 1109, 1688, 2127
MslI CAYNNNNRTG 4 cut(s) 126, 1632, 1858, 2004
MspA1I CMGCKG 1 cut(s) 268
MspCI CTTAAG 1 cut(s) 1687
MspI CCGG 3 cut(s) 1379, 1419, 1927
MspR9I CCNGG 5 cut(s) 54, 619, 1226, 1380, 1419
MvaI CCWGG 3 cut(s) 54, 619, 1226
MvnI CGCG 1 cut(s) 661
MwoI GCNNNNNNNGC 2 cut(s) 1370, 2178
NciI CCSGG 2 cut(s) 1380, 1419
NcoI CCATGG 3 cut(s) 159, 829, 1390
NlaIV GGNNCC 6 cut(s) 51, 74, 1042, 1183, 1428, 1989
NmeAIII GCCGAG 1 cut(s) 329
NmuCI GTSAC 2 cut(s) 1076, 2207
NsiI ATGCAT 1 cut(s) 1602
NspI RCATGY 1 cut(s) 1600
PaeI GCATGC 1 cut(s) 1600
PagI TCATGA 1 cut(s) 1915
PaqCI CACCTGC 1 cut(s) 2041
PceI AGGCCT 1 cut(s) 622
PciSI GCTCTTC 1 cut(s) 690
PdmI GAANNNNTTC 1 cut(s) 804
PflFI GACNNNGTC 1 cut(s) 1401
PkrI GCNGC 5 cut(s) 6, 187, 267, 961, 1719
PleI GAGTC 2 cut(s) 828, 2221
PpsI GAGTC 2 cut(s) 828, 2221
PpuMI RGGWCCY 1 cut(s) 980
PshBI ATTAAT 1 cut(s) 2127
PsiI TTATAA 4 cut(s) 252, 1256, 1305, 1356
Psp5II RGGWCCY 1 cut(s) 980
Psp6I CCWGG 3 cut(s) 52, 617, 1224
PspFI CCCAGC 1 cut(s) 268
PspGI CCWGG 3 cut(s) 52, 617, 1224
PspN4I GGNNCC 6 cut(s) 51, 74, 1042, 1183, 1428, 1989
PspPI GGNCC 6 cut(s) 15, 56, 488, 980, 1381, 1749
PspPPI RGGWCCY 1 cut(s) 980
PstI CTGCAG 1 cut(s) 190
PstNI CAGNNNCTG 1 cut(s) 1331
PsuI RGATCY 5 cut(s) 72, 766, 802, 1426, 1987
PsyI GACNNNGTC 1 cut(s) 1401
PvuII CAGCTG 1 cut(s) 268
RsaI GTAC 5 cut(s) 120, 138, 286, 749, 827
RsaNI GTAC 5 cut(s) 119, 137, 285, 748, 826
RseI CAYNNNNRTG 4 cut(s) 126, 1632, 1858, 2004
SapI GCTCTTC 1 cut(s) 690
SaqAI TTAA 5 cut(s) 1071, 1083, 1109, 1688, 2127
SatI GCNGC 5 cut(s) 5, 186, 266, 960, 1718
Sau96I GGNCC 6 cut(s) 15, 56, 488, 980, 1381, 1749
SchI GAGTC 2 cut(s) 828, 2222
ScrFI CCNGG 5 cut(s) 54, 619, 1226, 1380, 1419
SduI GDGCHC 2 cut(s) 24, 1264
SfaNI GCATC 5 cut(s) 335, 398, 1102, 1360, 1609
SfcI CTRYAG 1 cut(s) 186
SinI GGWCC 4 cut(s) 15, 488, 980, 1749
SmiMI CAYNNNNRTG 4 cut(s) 126, 1632, 1858, 2004
SmlI CTYRAG 1 cut(s) 1687
SmoI CTYRAG 1 cut(s) 1687
SphI GCATGC 1 cut(s) 1600
Sse9I AATT 9 cut(s) 152, 247, 1012, 1104, 1161, 1308, 1849, 2124, 2128
SseBI AGGCCT 1 cut(s) 622
SsiI CCGC 4 cut(s) 432, 554, 1449, 1747
SspI AATATT 3 cut(s) 1126, 1768, 2071
SspMI CTAG 3 cut(s) 624, 984, 990
StuI AGGCCT 1 cut(s) 622
StyD4I CCNGG 5 cut(s) 52, 617, 1224, 1378, 1417
StyI CCWWGG 5 cut(s) 159, 829, 989, 1185, 1390
TaaI ACNGT 6 cut(s) 109, 538, 1051, 1333, 1655, 2139
TaiI ACGT 1 cut(s) 338
TaqI TCGA 3 cut(s) 837, 865, 1132
TasI AATT 9 cut(s) 152, 247, 1012, 1104, 1161, 1308, 1849, 2124, 2128
TatI WGTACW 2 cut(s) 136, 284
Tru1I TTAA 5 cut(s) 1071, 1083, 1109, 1688, 2127
Tru9I TTAA 5 cut(s) 1071, 1083, 1109, 1688, 2127
TscAI CASTG 5 cut(s) 541, 1500, 1878, 2044, 2183
TseFI GTSAC 2 cut(s) 1076, 2207
TseI GCWGC 5 cut(s) 4, 185, 265, 959, 1717
Tsp45I GTSAC 2 cut(s) 1076, 2207
TspDTI ATGAA 9 cut(s) 596, 678, 1184, 1301, 1842, 1899, 1904, 1932, 2022
TspGWI ACGGA 1 cut(s) 1310
TspRI CASTG 5 cut(s) 541, 1500, 1878, 2044, 2183
Tth111I GACNNNGTC 1 cut(s) 1401
Vha464I CTTAAG 1 cut(s) 1687
VpaK11BI GGWCC 4 cut(s) 15, 488, 980, 1749
VspI ATTAAT 1 cut(s) 2127
XapI RAATTY 5 cut(s) 152, 1012, 1104, 1308, 1849
XceI RCATGY 1 cut(s) 1600
XcmI CCANNNNNNNNNTGG 1 cut(s) 66
XmaJI CCTAGG 1 cut(s) 989
XmiI GTMKAC 2 cut(s) 1436, 1650
XmnI GAANNNNTTC 1 cut(s) 804
XspI CTAG 3 cut(s) 624, 984, 990
Zsp2I ATGCAT 1 cut(s) 1602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.