PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24715 AT3G24715 AT3G24715 |
| fragaria_vesca | FvH4_2g19501 |
| malus_domestica | MD05G1179200.v1.1 MD10G1168800.v1.1 |
| prunus_persica | Prupe.8G206500_v2.0.a1 |
| pyrus_communis | pycom05g16570 pycom10g14550 |
| rosa_chinensis | RchiOBHm_Chr6g0285191 |
| rosa_laevigata | RLG00000012662 |
| rosa_multiflora | Rmu_co8416369.1_g000001 Rmu_sc0005710.1_g000005 Rmu_sc0006801.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00183430 |
| rosa_rugosa | Rorug06G0173200 |
| rosa_samantha | Rh6AG283200 Rh6BG284500 Rh6CG285900 Rh6DG278900 |
| rosa_wichuraiana | Rw0G000360 Rw6G024400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 252, 3077 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1340 |
| Acc65I | GGTACC | 1 cut(s) | 32 |
| AccB1I | GGYRCC | 3 cut(s) | 32, 3277, 3398 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 106 |
| AccI | GTMKAC | 2 cut(s) | 86, 1247 |
| AccII | CGCG | 1 cut(s) | 661 |
| AciI | CCGC | 6 cut(s) | 185, 235, 350, 2093, 2504, 2812 |
| AcoI | YGGCCR | 3 cut(s) | 488, 1261, 3512 |
| AcuI | CTGAAG | 4 cut(s) | 155, 1236, 2127, 3548 |
| AdeI | CACNNNGTG | 1 cut(s) | 415 |
| AfaI | GTAC | 7 cut(s) | 34, 138, 1596, 2214, 2782, 2964, 3583 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 106, 629, 1824, 1825, 1844, 3408 |
| AflII | CTTAAG | 1 cut(s) | 3038 |
| AflIII | ACRYGT | 1 cut(s) | 659 |
| AhlI | ACTAGT | 1 cut(s) | 995 |
| AjnI | CCWGG | 3 cut(s) | 617, 2037, 2530 |
| AleI | CACNNNNGTG | 2 cut(s) | 1847, 2145 |
| Alw26I | GTCTC | 6 cut(s) | 136, 525, 650, 1348, 2661, 3316 |
| AoxI | GGCC | 7 cut(s) | 488, 620, 860, 1192, 1261, 2116, 3512 |
| ApeKI | GCWGC | 9 cut(s) | 4, 726, 956, 1925, 2342, 2850, 3092, 3300, 3303 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 804, 3574 |
| Asp718I | GGTACC | 1 cut(s) | 32 |
| AspS9I | GGNCC | 3 cut(s) | 1192, 2192, 3018 |
| AsuC2I | CCSGG | 1 cut(s) | 3308 |
| AvaII | GGWCC | 2 cut(s) | 2192, 3018 |
| AxyI | CCTNAGG | 1 cut(s) | 3023 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3225, 3258 |
| BalI | TGGCCA | 1 cut(s) | 1263 |
| BamHI | GGATCC | 2 cut(s) | 72, 3175 |
| BanI | GGYRCC | 3 cut(s) | 32, 3277, 3398 |
| BauI | CACGAG | 2 cut(s) | 1295, 2014 |
| BbsI | GAAGAC | 3 cut(s) | 1125, 1645, 1997 |
| BbvI | GCAGC | 9 cut(s) | 16, 738, 943, 1937, 2329, 2837, 3104, 3312, 3315 |
| BccI | CCATC | 9 cut(s) | 422, 623, 1277, 2053, 2144, 2298, 2963, 3268, 3410 |
| BceAI | ACGGC | 1 cut(s) | 3499 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1849, 1883 |
| BciT130I | CCWGG | 3 cut(s) | 619, 2039, 2532 |
| BciVI | GTATCC | 2 cut(s) | 2371, 2482 |
| BcnI | CCSGG | 1 cut(s) | 3308 |
| BcoDI | GTCTC | 6 cut(s) | 136, 525, 650, 1348, 2661, 3316 |
| BcuI | ACTAGT | 1 cut(s) | 995 |
| BfaI | CTAG | 5 cut(s) | 624, 987, 996, 2133, 3161 |
| BfmI | CTRYAG | 4 cut(s) | 264, 1631, 1923, 2994 |
| BfrI | CTTAAG | 1 cut(s) | 3038 |
| BfuI | GTATCC | 2 cut(s) | 2371, 2482 |
| BglII | AGATCT | 3 cut(s) | 802, 1357, 3357 |
| BlpI | GCTNAGC | 1 cut(s) | 401 |
| Bme1390I | CCNGG | 4 cut(s) | 619, 2039, 2532, 3308 |
| Bme18I | GGWCC | 2 cut(s) | 2192, 3018 |
| BmgT120I | GGNCC | 3 cut(s) | 1192, 2192, 3018 |
| BmrFI | CCNGG | 4 cut(s) | 619, 2039, 2532, 3308 |
| BmrI | ACTGGG | 3 cut(s) | 86, 1137, 1854 |
| BmsI | GCATC | 7 cut(s) | 335, 763, 1099, 1290, 2631, 2680, 3079 |
| BmuI | ACTGGG | 3 cut(s) | 86, 1137, 1854 |
| BpiI | GAAGAC | 3 cut(s) | 1125, 1645, 1997 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3163, 3195 |
| BpmI | CTGGAG | 1 cut(s) | 3387 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 401 |
| BpuEI | CTTGAG | 3 cut(s) | 1449, 2332, 3190 |
| BpuMI | CCSGG | 1 cut(s) | 3308 |
| BsaBI | GATNNNNATC | 1 cut(s) | 801 |
| BsaI | GGTCTC | 1 cut(s) | 3316 |
| BsaJI | CCNNGG | 5 cut(s) | 159, 617, 863, 1589, 3269 |
| BsaWI | WCCGGW | 1 cut(s) | 716 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 305, 335 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 106, 629, 1824, 1825, 1844, 3408 |
| Bse118I | RCCGGY | 1 cut(s) | 3060 |
| Bse21I | CCTNAGG | 1 cut(s) | 3023 |
| Bse3DI | GCAATG | 2 cut(s) | 1193, 2700 |
| Bse8I | GATNNNNATC | 1 cut(s) | 801 |
| BseBI | CCWGG | 3 cut(s) | 619, 2039, 2532 |
| BseDI | CCNNGG | 5 cut(s) | 159, 617, 863, 1589, 3269 |
| BseGI | GGATG | 7 cut(s) | 2064, 2215, 2653, 2827, 2932, 3094, 3279 |
| BseJI | GATNNNNATC | 1 cut(s) | 801 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 106, 629, 1824, 1825, 1844, 3408 |
| BseMI | GCAATG | 2 cut(s) | 1193, 2700 |
| BseRI | GAGGAG | 4 cut(s) | 164, 319, 513, 836 |
| BseX3I | CGGCCG | 1 cut(s) | 3512 |
| BseXI | GCAGC | 9 cut(s) | 16, 738, 943, 1937, 2329, 2837, 3104, 3312, 3315 |
| BsgI | GTGCAG | 2 cut(s) | 142, 189 |
| Bsh1236I | CGCG | 1 cut(s) | 661 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3515 |
| BshFI | GGCC | 7 cut(s) | 490, 622, 862, 1194, 1263, 2118, 3514 |
| BshNI | GGYRCC | 3 cut(s) | 32, 3277, 3398 |
| BsiEI | CGRYCG | 1 cut(s) | 3515 |
| BsiSI | CCGG | 3 cut(s) | 717, 3061, 3307 |
| BslFI | GGGAC | 4 cut(s) | 1099, 2493, 2542, 3004 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 106, 629, 1824, 1825, 1844, 3408 |
| BsmAI | GTCTC | 6 cut(s) | 136, 525, 650, 1348, 2661, 3316 |
| BsmBI | CGTCTC | 1 cut(s) | 650 |
| BsmFI | GGGAC | 4 cut(s) | 1099, 2493, 2542, 3004 |
| BsmI | GAATGC | 2 cut(s) | 2535, 3115 |
| BsnI | GGCC | 7 cut(s) | 490, 622, 862, 1194, 1263, 2118, 3514 |
| Bso31I | GGTCTC | 1 cut(s) | 3316 |
| Bsp1407I | TGTACA | 2 cut(s) | 136, 2212 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 401 |
| Bsp19I | CCATGG | 1 cut(s) | 3269 |
| BspACI | CCGC | 6 cut(s) | 185, 235, 350, 2093, 2504, 2812 |
| BspANI | GGCC | 7 cut(s) | 490, 622, 862, 1194, 1263, 2118, 3514 |
| BspFNI | CGCG | 1 cut(s) | 661 |
| BspHI | TCATGA | 2 cut(s) | 1720, 1807 |
| BspMAI | CTGCAG | 2 cut(s) | 1635, 1927 |
| BspQI | GCTCTTC | 1 cut(s) | 690 |
| BspT107I | GGYRCC | 3 cut(s) | 32, 3277, 3398 |
| BspTI | CTTAAG | 1 cut(s) | 3038 |
| BspTNI | GGTCTC | 1 cut(s) | 3316 |
| BsrDI | GCAATG | 2 cut(s) | 1193, 2700 |
| BsrFI | RCCGGY | 1 cut(s) | 3060 |
| BsrGI | TGTACA | 2 cut(s) | 136, 2212 |
| BssAI | RCCGGY | 1 cut(s) | 3060 |
| BssECI | CCNNGG | 5 cut(s) | 159, 617, 863, 1589, 3269 |
| BssSI | CACGAG | 2 cut(s) | 1295, 2014 |
| BssT1I | CCWWGG | 3 cut(s) | 159, 1589, 3269 |
| Bst2BI | CACGAG | 2 cut(s) | 1295, 2014 |
| Bst2UI | CCWGG | 3 cut(s) | 619, 2039, 2532 |
| Bst6I | CTCTTC | 5 cut(s) | 187, 690, 1856, 3435, 3477 |
| BstAFI | CTTAAG | 1 cut(s) | 3038 |
| BstAUI | TGTACA | 2 cut(s) | 136, 2212 |
| BstC8I | GCNNGC | 5 cut(s) | 237, 731, 1403, 3030, 3546 |
| BstDSI | CCRYGG | 2 cut(s) | 863, 3269 |
| BstEII | GGTNACC | 1 cut(s) | 3492 |
| BstF5I | GGATG | 7 cut(s) | 2064, 2215, 2653, 2827, 2932, 3094, 3279 |
| BstFNI | CGCG | 1 cut(s) | 661 |
| BstMAI | GTCTC | 6 cut(s) | 136, 525, 650, 1348, 2661, 3316 |
| BstMCI | CGRYCG | 1 cut(s) | 3515 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 411, 841, 2090, 2424, 2996, 3070, 3089 |
| BstNI | CCWGG | 3 cut(s) | 619, 2039, 2532 |
| BstNSI | RCATGY | 3 cut(s) | 1405, 1412, 3032 |
| BstPI | GGTNACC | 1 cut(s) | 3492 |
| BstSCI | CCNGG | 4 cut(s) | 617, 2037, 2530, 3306 |
| BstSFI | CTRYAG | 4 cut(s) | 264, 1631, 1923, 2994 |
| BstUI | CGCG | 1 cut(s) | 661 |
| BstV1I | GCAGC | 9 cut(s) | 16, 738, 943, 1937, 2329, 2837, 3104, 3312, 3315 |
| BstV2I | GAAGAC | 3 cut(s) | 1125, 1645, 1997 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1202, 1271 |
| BstZI | CGGCCG | 1 cut(s) | 3512 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3023 |
| BsuI | GTATCC | 2 cut(s) | 2371, 2482 |
| BsuRI | GGCC | 7 cut(s) | 490, 622, 862, 1194, 1263, 2118, 3514 |
| BtgI | CCRYGG | 2 cut(s) | 863, 3269 |
| BtgZI | GCGATG | 1 cut(s) | 3466 |
| BtsCI | GGATG | 7 cut(s) | 2064, 2215, 2653, 2827, 2932, 3094, 3279 |
| BtsIMutI | CAGTG | 9 cut(s) | 273, 1311, 1506, 1579, 1842, 1936, 1965, 2407, 2524 |
| Cac8I | GCNNGC | 5 cut(s) | 237, 731, 1403, 3030, 3546 |
| CciI | TCATGA | 2 cut(s) | 1720, 1807 |
| Cfr10I | RCCGGY | 1 cut(s) | 3060 |
| Cfr13I | GGNCC | 3 cut(s) | 1192, 2192, 3018 |
| CseI | GACGC | 2 cut(s) | 667, 3481 |
| Csp6I | GTAC | 7 cut(s) | 33, 137, 1595, 2213, 2781, 2963, 3582 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2595, 2630 |
| CviQI | GTAC | 7 cut(s) | 33, 137, 1595, 2213, 2781, 2963, 3582 |
| DraI | TTTAAA | 2 cut(s) | 1081, 2350 |
| DraIII | CACNNNGTG | 1 cut(s) | 415 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1340 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1340 |
| EaeI | YGGCCR | 3 cut(s) | 488, 1261, 3512 |
| EagI | CGGCCG | 1 cut(s) | 3512 |
| Eam1104I | CTCTTC | 5 cut(s) | 187, 690, 1856, 3435, 3477 |
| EarI | CTCTTC | 5 cut(s) | 187, 690, 1856, 3435, 3477 |
| EclXI | CGGCCG | 1 cut(s) | 3512 |
| Eco130I | CCWWGG | 3 cut(s) | 159, 1589, 3269 |
| Eco147I | AGGCCT | 2 cut(s) | 622, 2118 |
| Eco31I | GGTCTC | 1 cut(s) | 3316 |
| Eco47I | GGWCC | 2 cut(s) | 2192, 3018 |
| Eco52I | CGGCCG | 1 cut(s) | 3512 |
| Eco57I | CTGAAG | 4 cut(s) | 155, 1236, 2127, 3548 |
| Eco81I | CCTNAGG | 1 cut(s) | 3023 |
| Eco91I | GGTNACC | 1 cut(s) | 3492 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3018 |
| EcoO65I | GGTNACC | 1 cut(s) | 3492 |
| EcoRI | GAATTC | 1 cut(s) | 259 |
| EcoRII | CCWGG | 3 cut(s) | 617, 2037, 2530 |
| EcoT14I | CCWWGG | 3 cut(s) | 159, 1589, 3269 |
| EcoT22I | ATGCAT | 1 cut(s) | 3393 |
| ErhI | CCWWGG | 3 cut(s) | 159, 1589, 3269 |
| Esp3I | CGTCTC | 1 cut(s) | 650 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 184, 216, 2837, 2869 |
| FaqI | GGGAC | 4 cut(s) | 1099, 2493, 2542, 3004 |
| FauI | CCCGC | 2 cut(s) | 228, 2805 |
| FauNDI | CATATG | 3 cut(s) | 738, 2563, 2785 |
| FblI | GTMKAC | 2 cut(s) | 86, 1247 |
| FokI | GGATG | 7 cut(s) | 2071, 2202, 2660, 2834, 2919, 3101, 3286 |
| FspBI | CTAG | 5 cut(s) | 624, 987, 996, 2133, 3161 |
| GsuI | CTGGAG | 1 cut(s) | 3387 |
| HaeIII | GGCC | 7 cut(s) | 490, 622, 862, 1194, 1263, 2118, 3514 |
| HapII | CCGG | 3 cut(s) | 717, 3061, 3307 |
| HgaI | GACGC | 2 cut(s) | 667, 3481 |
| HincII | GTYRAC | 6 cut(s) | 87, 916, 1031, 2237, 2572, 3166 |
| HindII | GTYRAC | 6 cut(s) | 87, 916, 1031, 2237, 2572, 3166 |
| HindIII | AAGCTT | 1 cut(s) | 3071 |
| HpaII | CCGG | 3 cut(s) | 717, 3061, 3307 |
| Hpy166II | GTNNAC | 8 cut(s) | 87, 916, 1031, 1248, 2237, 2515, 2572, 3166 |
| Hpy8I | GTNNAC | 8 cut(s) | 87, 916, 1031, 1248, 2237, 2515, 2572, 3166 |
| Hpy99I | CGWCG | 1 cut(s) | 1718 |
| HpyAV | CCTTC | 6 cut(s) | 210, 412, 431, 442, 1463, 3313 |
| HpyCH4IV | ACGT | 2 cut(s) | 1716, 2155 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 411, 841, 2090, 2424, 2996, 3070, 3089 |
| HpySE526I | ACGT | 2 cut(s) | 1716, 2155 |
| KflI | GGGWCCC | 1 cut(s) | 3018 |
| KpnI | GGTACC | 1 cut(s) | 36 |
| LguI | GCTCTTC | 1 cut(s) | 690 |
| LmnI | GCTCC | 2 cut(s) | 502, 2972 |
| Lsp1109I | GCAGC | 9 cut(s) | 16, 738, 943, 1937, 2329, 2837, 3104, 3312, 3315 |
| LweI | GCATC | 7 cut(s) | 335, 763, 1099, 1290, 2631, 2680, 3079 |
| MaeI | CTAG | 5 cut(s) | 624, 987, 996, 2133, 3161 |
| MaeII | ACGT | 2 cut(s) | 1716, 2155 |
| MaeIII | GTNAC | 9 cut(s) | 932, 1214, 1274, 1574, 1840, 2011, 2524, 3149, 3492 |
| MfeI | CAATTG | 1 cut(s) | 2882 |
| MlsI | TGGCCA | 1 cut(s) | 1263 |
| MluI | ACGCGT | 1 cut(s) | 659 |
| MluNI | TGGCCA | 1 cut(s) | 1263 |
| MlyI | GAGTC | 8 cut(s) | 92, 323, 527, 899, 1121, 1628, 2242, 2642 |
| MmeI | TCCRAC | 6 cut(s) | 436, 1356, 2005, 2343, 2466, 3181 |
| Mox20I | TGGCCA | 1 cut(s) | 1263 |
| Mph1103I | ATGCAT | 1 cut(s) | 3393 |
| MroXI | GAANNNNTTC | 2 cut(s) | 804, 3574 |
| MscI | TGGCCA | 1 cut(s) | 1263 |
| MseI | TTAA | 5 cut(s) | 1080, 1493, 2349, 2841, 3039 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1847, 2145, 2937, 3268, 3396 |
| Msp20I | TGGCCA | 1 cut(s) | 1263 |
| MspA1I | CMGCKG | 2 cut(s) | 1256, 2093 |
| MspCI | CTTAAG | 1 cut(s) | 3038 |
| MspI | CCGG | 3 cut(s) | 717, 3061, 3307 |
| MspR9I | CCNGG | 4 cut(s) | 619, 2039, 2532, 3308 |
| MunI | CAATTG | 1 cut(s) | 2882 |
| Mva1269I | GAATGC | 2 cut(s) | 2535, 3115 |
| MvaI | CCWGG | 3 cut(s) | 619, 2039, 2532 |
| MvnI | CGCG | 1 cut(s) | 661 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 411, 841, 2090, 2424, 2996, 3070, 3089 |
| NciI | CCSGG | 1 cut(s) | 3308 |
| NcoI | CCATGG | 1 cut(s) | 3269 |
| NdeI | CATATG | 3 cut(s) | 738, 2563, 2785 |
| NmuCI | GTSAC | 7 cut(s) | 1214, 1274, 1574, 1840, 2011, 3149, 3492 |
| NsiI | ATGCAT | 1 cut(s) | 3393 |
| NspI | RCATGY | 3 cut(s) | 1405, 1412, 3032 |
| OliI | CACNNNNGTG | 2 cut(s) | 1847, 2145 |
| PaeI | GCATGC | 2 cut(s) | 1405, 3032 |
| PagI | TCATGA | 2 cut(s) | 1720, 1807 |
| PceI | AGGCCT | 2 cut(s) | 622, 2118 |
| PciSI | GCTCTTC | 1 cut(s) | 690 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1710 |
| PctI | GAATGC | 2 cut(s) | 2535, 3115 |
| PdmI | GAANNNNTTC | 2 cut(s) | 804, 3574 |
| PflFI | GACNNNGTC | 1 cut(s) | 1129 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 106 |
| PleI | GAGTC | 8 cut(s) | 91, 322, 526, 898, 1120, 1627, 2241, 2641 |
| PpsI | GAGTC | 8 cut(s) | 91, 322, 526, 898, 1120, 1627, 2241, 2641 |
| PpuMI | RGGWCCY | 1 cut(s) | 3018 |
| PsiI | TTATAA | 2 cut(s) | 252, 3077 |
| Psp5II | RGGWCCY | 1 cut(s) | 3018 |
| Psp6I | CCWGG | 3 cut(s) | 617, 2037, 2530 |
| PspEI | GGTNACC | 1 cut(s) | 3492 |
| PspGI | CCWGG | 3 cut(s) | 617, 2037, 2530 |
| PspPI | GGNCC | 3 cut(s) | 1192, 2192, 3018 |
| PspPPI | RGGWCCY | 1 cut(s) | 3018 |
| PstI | CTGCAG | 2 cut(s) | 1635, 1927 |
| PsyI | GACNNNGTC | 1 cut(s) | 1129 |
| PvuII | CAGCTG | 1 cut(s) | 1256 |
| RsaI | GTAC | 7 cut(s) | 34, 138, 1596, 2214, 2782, 2964, 3583 |
| RsaNI | GTAC | 7 cut(s) | 33, 137, 1595, 2213, 2781, 2963, 3582 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1847, 2145, 2937, 3268, 3396 |
| SalI | GTCGAC | 1 cut(s) | 85 |
| SapI | GCTCTTC | 1 cut(s) | 690 |
| SaqAI | TTAA | 5 cut(s) | 1080, 1493, 2349, 2841, 3039 |
| Sau96I | GGNCC | 3 cut(s) | 1192, 2192, 3018 |
| SchI | GAGTC | 8 cut(s) | 92, 323, 527, 899, 1121, 1628, 2242, 2642 |
| ScrFI | CCNGG | 4 cut(s) | 619, 2039, 2532, 3308 |
| SfaNI | GCATC | 7 cut(s) | 335, 763, 1099, 1290, 2631, 2680, 3079 |
| SfcI | CTRYAG | 4 cut(s) | 264, 1631, 1923, 2994 |
| SinI | GGWCC | 2 cut(s) | 2192, 3018 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1847, 2145, 2937, 3268, 3396 |
| SmlI | CTYRAG | 4 cut(s) | 1464, 2311, 3038, 3169 |
| SmoI | CTYRAG | 4 cut(s) | 1464, 2311, 3038, 3169 |
| SpeI | ACTAGT | 1 cut(s) | 995 |
| SphI | GCATGC | 2 cut(s) | 1405, 3032 |
| SseBI | AGGCCT | 2 cut(s) | 622, 2118 |
| SsiI | CCGC | 6 cut(s) | 185, 235, 350, 2093, 2504, 2812 |
| SspI | AATATT | 1 cut(s) | 3127 |
| SspMI | CTAG | 5 cut(s) | 624, 987, 996, 2133, 3161 |
| StuI | AGGCCT | 2 cut(s) | 622, 2118 |
| StyD4I | CCNGG | 4 cut(s) | 617, 2037, 2530, 3306 |
| StyI | CCWWGG | 3 cut(s) | 159, 1589, 3269 |
| TaiI | ACGT | 2 cut(s) | 1719, 2158 |
| TaqI | TCGA | 5 cut(s) | 86, 475, 929, 2293, 3433 |
| TaqII | GACCGA | 1 cut(s) | 534 |
| TatI | WGTACW | 2 cut(s) | 136, 2212 |
| TauI | GCSGC | 2 cut(s) | 353, 2096 |
| Tru1I | TTAA | 5 cut(s) | 1080, 1493, 2349, 2841, 3039 |
| Tru9I | TTAA | 5 cut(s) | 1080, 1493, 2349, 2841, 3039 |
| TscAI | CASTG | 9 cut(s) | 273, 1311, 1513, 1579, 1849, 1936, 1965, 2407, 2524 |
| TseFI | GTSAC | 7 cut(s) | 1214, 1274, 1574, 1840, 2011, 3149, 3492 |
| TseI | GCWGC | 9 cut(s) | 4, 726, 956, 1925, 2342, 2850, 3092, 3300, 3303 |
| Tsp45I | GTSAC | 7 cut(s) | 1214, 1274, 1574, 1840, 2011, 3149, 3492 |
| TspGWI | ACGGA | 1 cut(s) | 2817 |
| TspRI | CASTG | 9 cut(s) | 273, 1311, 1513, 1579, 1849, 1936, 1965, 2407, 2524 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1129 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 106 |
| Vha464I | CTTAAG | 1 cut(s) | 3038 |
| VpaK11BI | GGWCC | 2 cut(s) | 2192, 3018 |
| XceI | RCATGY | 3 cut(s) | 1405, 1412, 3032 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1124 |
| XmiI | GTMKAC | 2 cut(s) | 86, 1247 |
| XmnI | GAANNNNTTC | 2 cut(s) | 804, 3574 |
| XspI | CTAG | 5 cut(s) | 624, 987, 996, 2133, 3161 |
| Zsp2I | ATGCAT | 1 cut(s) | 3393 |