Prupe.8G224300_v2.0.a1

Belongs to the actin-binding proteins ADF family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
20218589 .. 20220786
2198 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G224300.1

Sequence Viewer

Length: 441 bp
ATGTCTTTCAGAGGGCTTAGCAGGCCAAATGCTTCGTGTGCCATGGGAGTTTCTGATGACAGCAAGAACACTTTCATGGAACTGCAGAGGAAGAAGGTTCACCGCTATGTGATATTCAAGGTTGATGAGAAGAAGAGGGAGGTTGTAGTTGAAAAGATTGGCGGCCCAGCTGAGAGCTATGATGATTTTGCGGCAGCTTTGCCTGAAAATGATTGCAGATATGCAGTTTATGACTTCGATTTTGTGACTTCTGAGAACTGTCAAAAGAGCAAGATCTTCTTCATTGCATGGTCCCCTTCAACCTCTCGAATCCGTGCAAAGATGCTGTATGCAACATCTAAAGATAGGTTTCGGCGTGAGCTGGATGGTATTCACTATGAGATTCAGGCTACTGACCCATCAGAGATGGATCTGGAGGTGCTCAGAGACCGTGCACACTGA

Protein Analysis

147

Amino Acids

16.92

Weight (kDa)

6.83

Isoelectric Point (pI)

47.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 103, 162, 191
AclWI GGATC 1 cut(s) 417
AgsI TTSAA 3 cut(s) 118, 152, 300
AluBI AGCT 4 cut(s) 170, 177, 197, 361
AluI AGCT 4 cut(s) 170, 177, 197, 361
Alw21I GWGCWC 2 cut(s) 423, 436
Alw26I GTCTC 1 cut(s) 420
Alw44I GTGCAC 1 cut(s) 432
AlwI GGATC 1 cut(s) 417
AoxI GGCC 2 cut(s) 23, 163
ApaLI GTGCAC 1 cut(s) 432
ApeKI GCWGC 1 cut(s) 194
ArsI GACNNNNNNTTYG 2 cut(s) 224, 256
Asp700I GAANNNNTTC 1 cut(s) 71
AspS9I GGNCC 2 cut(s) 164, 291
AsuHPI GGTGA 1 cut(s) 92
AvaII GGWCC 1 cut(s) 291
BaeGI GKGCMC 1 cut(s) 436
Bbv12I GWGCWC 2 cut(s) 423, 436
BbvI GCAGC 1 cut(s) 206
BccI CCATC 3 cut(s) 359, 400, 406
BcoDI GTCTC 1 cut(s) 420
BfmI CTRYAG 1 cut(s) 83
BglII AGATCT 1 cut(s) 273
BisI GCNGC 3 cut(s) 163, 192, 195
BlpI GCTNAGC 1 cut(s) 17
BlsI GCNGC 3 cut(s) 164, 193, 196
Bme18I GGWCC 1 cut(s) 291
BmgT120I GGNCC 2 cut(s) 164, 291
BmiI GGNNCC 1 cut(s) 293
BmsI GCATC 1 cut(s) 312
BpmI CTGGAG 1 cut(s) 434
Bpu1102I GCTNAGC 1 cut(s) 17
BsaI GGTCTC 1 cut(s) 420
BsaJI CCNNGG 1 cut(s) 42
Bse3DI GCAATG 1 cut(s) 282
BseDI CCNNGG 1 cut(s) 42
BseGI GGATG 1 cut(s) 370
BseMI GCAATG 1 cut(s) 282
BseMII CTCAG 3 cut(s) 162, 243, 436
BseSI GKGCMC 1 cut(s) 436
BseXI GCAGC 1 cut(s) 206
BseYI CCCAGC 1 cut(s) 166
BshFI GGCC 2 cut(s) 25, 165
BsiHKAI GWGCWC 2 cut(s) 423, 436
BslFI GGGAC 1 cut(s) 277
BsmAI GTCTC 1 cut(s) 420
BsmFI GGGAC 1 cut(s) 277
BsnI GGCC 2 cut(s) 25, 165
Bso31I GGTCTC 1 cut(s) 420
Bsp1286I GDGCHC 2 cut(s) 423, 436
Bsp143I GATC 2 cut(s) 273, 409
Bsp1720I GCTNAGC 1 cut(s) 17
Bsp19I CCATGG 1 cut(s) 42
BspACI CCGC 3 cut(s) 103, 162, 191
BspANI GGCC 2 cut(s) 25, 165
BspCNI CTCAG 3 cut(s) 163, 244, 435
BspLI GGNNCC 1 cut(s) 293
BspMAI CTGCAG 1 cut(s) 87
BspPI GGATC 1 cut(s) 417
BspTNI GGTCTC 1 cut(s) 420
BsrDI GCAATG 1 cut(s) 282
BssECI CCNNGG 1 cut(s) 42
BssMI GATC 2 cut(s) 273, 409
BssT1I CCWWGG 1 cut(s) 42
Bst4CI ACNGT 2 cut(s) 260, 431
Bst6I CTCTTC 1 cut(s) 128
BstC8I GCNNGC 1 cut(s) 23
BstDEI CTNAG 4 cut(s) 17, 171, 252, 422
BstDSI CCRYGG 1 cut(s) 42
BstF5I GGATG 1 cut(s) 370
BstKTI GATC 2 cut(s) 276, 412
BstMAI GTCTC 1 cut(s) 420
BstMBI GATC 2 cut(s) 273, 409
BstMWI GCNNNNNNNGC 2 cut(s) 22, 38
BstSFI CTRYAG 1 cut(s) 83
BstSLI GKGCMC 1 cut(s) 436
BstV1I GCAGC 1 cut(s) 206
BstX2I RGATCY 2 cut(s) 273, 409
BstYI RGATCY 2 cut(s) 273, 409
BsuRI GGCC 2 cut(s) 25, 165
BtgI CCRYGG 1 cut(s) 42
BtsCI GGATG 1 cut(s) 370
BtsIMutI CAGTG 1 cut(s) 436
Cac8I GCNNGC 1 cut(s) 23
Cfr13I GGNCC 2 cut(s) 164, 291
CviAII CATG 3 cut(s) 43, 76, 288
CviJI RGCY 8 cut(s) 16, 25, 165, 170, 177, 197, 361, 389
CviKI_1 RGCY 8 cut(s) 16, 25, 165, 170, 177, 197, 361, 389
DdeI CTNAG 4 cut(s) 17, 171, 252, 422
DpnI GATC 2 cut(s) 275, 411
DpnII GATC 2 cut(s) 273, 409
Eam1104I CTCTTC 1 cut(s) 128
EarI CTCTTC 1 cut(s) 128
Eco130I CCWWGG 1 cut(s) 42
Eco31I GGTCTC 1 cut(s) 420
Eco47I GGWCC 1 cut(s) 291
EcoT14I CCWWGG 1 cut(s) 42
ErhI CCWWGG 1 cut(s) 42
FaeI CATG 3 cut(s) 46, 79, 291
FaiI YATR 9 cut(s) 44, 77, 108, 180, 222, 231, 289, 330, 378
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FaqI GGGAC 1 cut(s) 277
FatI CATG 3 cut(s) 42, 75, 287
Fnu4HI GCNGC 3 cut(s) 163, 192, 195
FokI GGATG 1 cut(s) 377
Fsp4HI GCNGC 3 cut(s) 163, 192, 195
GluI GCNGC 3 cut(s) 163, 192, 195
GsaI CCCAGC 1 cut(s) 170
GsuI CTGGAG 1 cut(s) 434
HaeIII GGCC 2 cut(s) 25, 165
Hin1II CATG 3 cut(s) 46, 79, 291
HinfI GANTC 2 cut(s) 309, 382
HphI GGTGA 1 cut(s) 92
Hpy166II GTNNAC 2 cut(s) 100, 434
Hpy188I TCNGA 5 cut(s) 11, 55, 253, 403, 425
Hpy188III TCNNGA 2 cut(s) 306, 413
Hpy8I GTNNAC 2 cut(s) 100, 434
HpyAV CCTTC 2 cut(s) 88, 306
HpyCH4III ACNGT 2 cut(s) 260, 431
HpyCH4V TGCA 7 cut(s) 85, 216, 224, 287, 317, 332, 434
HpyF10VI GCNNNNNNNGC 2 cut(s) 22, 38
HpyF3I CTNAG 4 cut(s) 17, 171, 252, 422
Hsp92II CATG 3 cut(s) 46, 79, 291
Kzo9I GATC 2 cut(s) 273, 409
LpnPI CCDG 6 cut(s) 7, 180, 216, 347, 371, 398
Lsp1109I GCAGC 1 cut(s) 206
LweI GCATC 1 cut(s) 312
MaeIII GTNAC 1 cut(s) 244
MalI GATC 2 cut(s) 275, 411
MboI GATC 2 cut(s) 273, 409
MboII GAAGA 5 cut(s) 103, 142, 145, 268, 271
MflI RGATCY 2 cut(s) 273, 409
MhlI GDGCHC 2 cut(s) 423, 436
MnlI CCTC 6 cut(s) 5, 81, 129, 133, 313, 409
MroXI GAANNNNTTC 1 cut(s) 71
MslI CAYNNNNRTG 2 cut(s) 74, 105
MspA1I CMGCKG 1 cut(s) 170
MwoI GCNNNNNNNGC 2 cut(s) 22, 38
NcoI CCATGG 1 cut(s) 42
NdeII GATC 2 cut(s) 273, 409
NlaIII CATG 3 cut(s) 46, 79, 291
NlaIV GGNNCC 1 cut(s) 293
NmuCI GTSAC 1 cut(s) 244
PdmI GAANNNNTTC 1 cut(s) 71
PfeI GAWTC 2 cut(s) 309, 382
PkrI GCNGC 3 cut(s) 164, 193, 196
PspFI CCCAGC 1 cut(s) 166
PspN4I GGNNCC 1 cut(s) 293
PspPI GGNCC 2 cut(s) 164, 291
PstI CTGCAG 1 cut(s) 87
PsuI RGATCY 2 cut(s) 273, 409
PvuII CAGCTG 1 cut(s) 170
RseI CAYNNNNRTG 2 cut(s) 74, 105
SatI GCNGC 3 cut(s) 163, 192, 195
Sau3AI GATC 2 cut(s) 273, 409
Sau96I GGNCC 2 cut(s) 164, 291
SduI GDGCHC 2 cut(s) 423, 436
SfaNI GCATC 1 cut(s) 312
SfcI CTRYAG 1 cut(s) 83
SinI GGWCC 1 cut(s) 291
SmiMI CAYNNNNRTG 2 cut(s) 74, 105
SsiI CCGC 3 cut(s) 103, 162, 191
StyI CCWWGG 1 cut(s) 42
TaaI ACNGT 2 cut(s) 260, 431
TaqI TCGA 2 cut(s) 237, 307
TauI GCSGC 2 cut(s) 165, 194
TfiI GAWTC 2 cut(s) 309, 382
TseFI GTSAC 1 cut(s) 244
TseI GCWGC 1 cut(s) 194
Tsp45I GTSAC 1 cut(s) 244
TspDTI ATGAA 2 cut(s) 64, 271
TspGWI ACGGA 1 cut(s) 302
VneI GTGCAC 1 cut(s) 432
VpaK11BI GGWCC 1 cut(s) 291
XmnI GAANNNNTTC 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.