Prupe.8G232800_v2.0.a1
BZIP Family

Light-inducible protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0009887
Physical Location & Seq
Forward (+)
20667746 .. 20670606
2861 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G232800.1

Sequence Viewer

Length: 1395 bp
ATGCATTCAGTGTTCTCCGTGGACGACGTCTCCGATACGGCTTGGGCGTTGTCGTCTCCGGCGATGAATAGGAGCGCGTCGGAGTGGGCCTTCGAGCAGTTTCTCGACGAGTTCTCGACCCCAGCGGCCACTCCTCGGCGATCAGTTGCCGTCGCTGATCAATTGACCGCTTCGTCGGTCGCTTCTTGTTCTGTTGCGTCTCAGTCGTCAACGTCGAAGCGCGAAGATGGAGATGAAGAGGTAGTTGAGATCAAGAAGCCCGATCATCATAATCATCATCATCAACCTCAGCAGCAGCTTAATCACCCTCCTCCTCCGCCGTTGGATCCGACGTCAACGGTTCAGGTTAATTCGGATCAGTACCGTGAATTTCTTAAGAACCAGCTCGATCTGGCTTGCGCTGCCGTCGCTCTCTCTCGCGCGTCGTCTTTGAAGCCTGTGGATTTGGGTAACATGGCCGCCGAGAGTCAATCGCAGCTGTCGAAGCCCTCACAATTAGCCCACAGTCAATCGCTAGATAAAGATGCTGGTCATGGTTTCCCAGTGCAACAAAATGAAGCTGACACTAGCCCACTTGGCATTCCGGCTTTACCTGCTGTTCAGAAAATAACGGGGTTGCAGAGTAAGCAGACAACAAGCGGATCATCGAAAGAGGACTCGGATGATGATGATCTCGAAGGAGACATTGAAATTAATGAGAATATGGATCCTTCTGATGTGAAACGTGCTAGGAGGATGCTGTCAAATCGAGAGTCAGCTAGACGCTCTAGAAGGAGAAAACAAGCACAAATGAGTGAACTTGAGACACAGGTTGGTCAACTGAGGGTTGAACACTCTACATTGTTAAAACGTCTCACAGACGTGAATCAGAAATATGATAATGCAGCTGTTGACAACAGAATATTAAGAGCTGATATTGAGACGTTAAGAGCAAAGGTGAAAATGGCAGAGGACTCCGTTAAGAGAGTGACAGGGATCAACCCGCTACTTCTGGCCATGTCAAATTTACCGAGTGTAAGCATACCATCAGTGAACCCCATGGATGGATCTACAAATGCTGCTGTGCCAATGCAACCGAACTCCAACCAGCTCTTTCATCCGGTAGTTCCTAATTTGGCCACTTCCACTCTACCTCACCAGAGATTGGACACTGGCTTTCCACGAGACCCCCCAATTTCTCTAGTCAGGAACCAACAGAGTAATGTTGGCCAGCCTACCGTCAGCGGAAGCAACATGGCTGAAATCTCTTCAATTCAACACACAGCTAGTGTAGATCATATGCAGCAGCAACCGCAGCAGCAGCAGCTTCGGCCAGGAGTGGGTCCACGTGAACCATTGCCGGGTTGGGATCCTCAGCTTTCCCATGCTGTCCCAAAGAACAAGAAACAGAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bZIP_1 bZIP_C

Protein Analysis

465

Amino Acids

50.69

Weight (kDa)

5.93

Isoelectric Point (pI)

61.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009887)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54620 AT3G54620 AT3G54620
fragaria_vesca FvH4_2g22580 FvH4_2g22580
malus_domestica MD05G1206400.v1.1 MD10G1193400.v1.1
prunus_persica Prupe.8G232800_v2.0.a1
pyrus_communis pycom05g19240 pycom05g19250 pycom10g16720
rosa_chinensis RchiOBHm_Chr6g0289641
rosa_laevigata RLG00000012286
rosa_multiflora Rmu_sc0005376.1_g000012
rosa_roxburghii Rroxscaffold_7G00177780
rosa_rugosa Rorug06G0205200
rosa_samantha Rh6AG316900 Rh6BG323500 Rh6CG330100 Rh6DG315300
rosa_wichuraiana Rw6G027330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 172
AatII GACGTC 2 cut(s) 30, 335
Acc36I ACCTGC 1 cut(s) 601
AccB7I CCANNNNNTGG 1 cut(s) 1144
AccII CGCG 4 cut(s) 77, 222, 420, 422
AciI CCGC 8 cut(s) 125, 168, 317, 459, 639, 983, 1224, 1292
AcoI YGGCCR 6 cut(s) 126, 456, 993, 1116, 1207, 1310
AcsI RAATTY 2 cut(s) 368, 1003
AcvI CACGTG 1 cut(s) 1328
AcyI GRCGYC 2 cut(s) 27, 332
AfaI GTAC 1 cut(s) 362
AfiI CCNNNNNNNGG 5 cut(s) 135, 1043, 1144, 1319, 1340
AflII CTTAAG 1 cut(s) 374
AgsI TTSAA 5 cut(s) 433, 689, 830, 1251, 1256
AjiI CACGTC 1 cut(s) 862
AjnI CCWGG 1 cut(s) 1312
AleI CACNNNNGTG 1 cut(s) 860
Alw26I GTCTC 8 cut(s) 34, 60, 204, 675, 797, 857, 914, 1158
AoxI GGCC 7 cut(s) 87, 126, 456, 993, 1116, 1207, 1310
ApoI RAATTY 2 cut(s) 368, 1003
ArsI GACNNNNNNTTYG 2 cut(s) 737, 769
AseI ATTAAT 1 cut(s) 693
AspLEI GCGC 4 cut(s) 77, 222, 401, 422
AspS9I GGNCC 2 cut(s) 87, 1322
AsuC2I CCSGG 1 cut(s) 1341
AsuHPI GGTGA 3 cut(s) 296, 949, 1127
AvaII GGWCC 1 cut(s) 1322
BalI TGGCCA 3 cut(s) 995, 1118, 1209
BamHI GGATCC 3 cut(s) 325, 706, 1348
BauI CACGAG 1 cut(s) 1161
BbrPI CACGTG 1 cut(s) 1328
BbvCI CCTCAGC 2 cut(s) 288, 1353
BccI CCATC 3 cut(s) 221, 1033, 1037
BceAI ACGGC 4 cut(s) 54, 134, 304, 389
BcgI CGANNNNNNTGC 2 cut(s) 1289, 1323
BciT130I CCWGG 1 cut(s) 1314
BclI TGATCA 1 cut(s) 157
BcnI CCSGG 1 cut(s) 1341
BcoDI GTCTC 8 cut(s) 34, 60, 204, 675, 797, 857, 914, 1158
BfaI CTAG 7 cut(s) 515, 567, 729, 759, 768, 1181, 1266
BfrI CTTAAG 1 cut(s) 374
BfuAI ACCTGC 1 cut(s) 601
BglI GCCNNNNNGGC 1 cut(s) 576
Bme1390I CCNGG 2 cut(s) 1314, 1341
Bme18I GGWCC 1 cut(s) 1322
BmgBI CACGTC 1 cut(s) 862
BmgT120I GGNCC 2 cut(s) 87, 1322
BmiI GGNNCC 5 cut(s) 327, 708, 1190, 1323, 1350
BmrFI CCNGG 2 cut(s) 1314, 1341
BmrI ACTGGG 1 cut(s) 536
BmsI GCATC 2 cut(s) 514, 726
BmuI ACTGGG 1 cut(s) 536
Bpu10I CCTNAGC 2 cut(s) 288, 1353
BpuEI CTTGAG 1 cut(s) 821
BpuMI CCSGG 1 cut(s) 1341
BsaAI YACGTR 1 cut(s) 1328
BsaBI GATNNNNATC 1 cut(s) 669
BsaHI GRCGYC 2 cut(s) 27, 332
BsaI GGTCTC 1 cut(s) 1158
BsaJI CCNNGG 3 cut(s) 18, 134, 1038
BsaWI WCCGGW 1 cut(s) 1099
BsaXI ACNNNNNCTCC 2 cut(s) 14, 44
Bsc4I CCNNNNNNNGG 5 cut(s) 135, 1043, 1144, 1319, 1340
Bse1I ACTGG 2 cut(s) 542, 1156
Bse3DI GCAATG 1 cut(s) 1334
Bse8I GATNNNNATC 1 cut(s) 669
BseBI CCWGG 1 cut(s) 1314
BseDI CCNNGG 3 cut(s) 18, 134, 1038
BseGI GGATG 4 cut(s) 667, 741, 1048, 1096
BseJI GATNNNNATC 1 cut(s) 669
BseLI CCNNNNNNNGG 5 cut(s) 135, 1043, 1144, 1319, 1340
BseMI GCAATG 1 cut(s) 1334
BseMII CTCAG 4 cut(s) 215, 302, 812, 1367
BseNI ACTGG 2 cut(s) 542, 1156
BseRI GAGGAG 3 cut(s) 123, 300, 303
BseYI CCCAGC 1 cut(s) 121
Bsh1236I CGCG 4 cut(s) 77, 222, 420, 422
Bsh1285I CGRYCG 1 cut(s) 180
BshFI GGCC 7 cut(s) 89, 128, 458, 995, 1118, 1209, 1312
BsiEI CGRYCG 1 cut(s) 180
BsiSI CCGG 4 cut(s) 59, 584, 1100, 1340
BslFI GGGAC 1 cut(s) 1355
BslI CCNNNNNNNGG 5 cut(s) 135, 1043, 1144, 1319, 1340
BsmAI GTCTC 8 cut(s) 34, 60, 204, 675, 797, 857, 914, 1158
BsmBI CGTCTC 5 cut(s) 34, 60, 204, 857, 914
BsmFI GGGAC 1 cut(s) 1355
BsmI GAATGC 2 cut(s) 4, 579
BsnI GGCC 7 cut(s) 89, 128, 458, 995, 1118, 1209, 1312
Bso31I GGTCTC 1 cut(s) 1158
Bsp19I CCATGG 1 cut(s) 1038
BspACI CCGC 8 cut(s) 125, 168, 317, 459, 639, 983, 1224, 1292
BspANI GGCC 7 cut(s) 89, 128, 458, 995, 1118, 1209, 1312
BspCNI CTCAG 4 cut(s) 214, 301, 813, 1366
BspFNI CGCG 4 cut(s) 77, 222, 420, 422
BspLI GGNNCC 5 cut(s) 327, 708, 1190, 1323, 1350
BspMI ACCTGC 1 cut(s) 601
BspTI CTTAAG 1 cut(s) 374
BspTNI GGTCTC 1 cut(s) 1158
BsrDI GCAATG 1 cut(s) 1334
BsrI ACTGG 2 cut(s) 542, 1156
BssECI CCNNGG 3 cut(s) 18, 134, 1038
BssNI GRCGYC 2 cut(s) 27, 332
BssSI CACGAG 1 cut(s) 1161
BssT1I CCWWGG 1 cut(s) 1038
Bst2BI CACGAG 1 cut(s) 1161
Bst2UI CCWGG 1 cut(s) 1314
Bst4CI ACNGT 4 cut(s) 340, 365, 506, 1219
Bst6I CTCTTC 2 cut(s) 231, 1252
BstACI GRCGYC 2 cut(s) 27, 332
BstAFI CTTAAG 1 cut(s) 374
BstBAI YACGTR 1 cut(s) 1328
BstC8I GCNNGC 2 cut(s) 397, 1211
BstDEI CTNAG 4 cut(s) 201, 288, 821, 1353
BstDSI CCRYGG 2 cut(s) 18, 1038
BstF5I GGATG 4 cut(s) 667, 741, 1048, 1096
BstFNI CGCG 4 cut(s) 77, 222, 420, 422
BstHHI GCGC 4 cut(s) 77, 222, 401, 422
BstMAI GTCTC 8 cut(s) 34, 60, 204, 675, 797, 857, 914, 1158
BstMCI CGRYCG 1 cut(s) 180
BstNI CCWGG 1 cut(s) 1314
BstSCI CCNGG 2 cut(s) 1312, 1339
BstUI CGCG 4 cut(s) 77, 222, 420, 422
BstX2I RGATCY 4 cut(s) 325, 706, 1046, 1348
BstYI RGATCY 4 cut(s) 325, 706, 1046, 1348
BsuRI GGCC 7 cut(s) 89, 128, 458, 995, 1118, 1209, 1312
BtgI CCRYGG 2 cut(s) 18, 1038
BtgZI GCGATG 1 cut(s) 77
BtrI CACGTC 1 cut(s) 862
BtsCI GGATG 4 cut(s) 667, 741, 1048, 1096
BtsIMutI CAGTG 4 cut(s) 15, 549, 1035, 1149
BveI ACCTGC 1 cut(s) 601
Cac8I GCNNGC 2 cut(s) 397, 1211
CfoI GCGC 4 cut(s) 77, 222, 401, 422
Cfr13I GGNCC 2 cut(s) 87, 1322
CseI GACGC 4 cut(s) 66, 186, 411, 771
Csp6I GTAC 1 cut(s) 361
CviAII CATG 6 cut(s) 454, 533, 997, 1039, 1234, 1364
CviQI GTAC 1 cut(s) 361
DdeI CTNAG 4 cut(s) 201, 288, 821, 1353
DrdI GACNNNNNNGTC 1 cut(s) 172
DseDI GACNNNNNNGTC 1 cut(s) 172
EaeI YGGCCR 6 cut(s) 126, 456, 993, 1116, 1207, 1310
Eam1104I CTCTTC 2 cut(s) 231, 1252
EarI CTCTTC 2 cut(s) 231, 1252
EciI GGCGGA 1 cut(s) 306
Eco130I CCWWGG 1 cut(s) 1038
Eco31I GGTCTC 1 cut(s) 1158
Eco47I GGWCC 1 cut(s) 1322
Eco72I CACGTG 1 cut(s) 1328
EcoRII CCWGG 1 cut(s) 1312
EcoT14I CCWWGG 1 cut(s) 1038
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 1038
Esp3I CGTCTC 5 cut(s) 34, 60, 204, 857, 914
FaeI CATG 6 cut(s) 457, 536, 1000, 1042, 1237, 1367
FaqI GGGAC 1 cut(s) 1355
FatI CATG 6 cut(s) 453, 532, 996, 1038, 1233, 1363
FauI CCCGC 1 cut(s) 990
FauNDI CATATG 1 cut(s) 1278
FbaI TGATCA 1 cut(s) 157
FokI GGATG 4 cut(s) 674, 748, 1055, 1083
FspBI CTAG 7 cut(s) 515, 567, 729, 759, 768, 1181, 1266
GlaI GCGC 4 cut(s) 76, 221, 400, 421
GsaI CCCAGC 1 cut(s) 125
HaeIII GGCC 7 cut(s) 89, 128, 458, 995, 1118, 1209, 1312
HapII CCGG 4 cut(s) 59, 584, 1100, 1340
HgaI GACGC 4 cut(s) 66, 186, 411, 771
HhaI GCGC 4 cut(s) 77, 222, 401, 422
Hin1I GRCGYC 2 cut(s) 27, 332
Hin1II CATG 6 cut(s) 457, 536, 1000, 1042, 1237, 1367
Hin6I GCGC 4 cut(s) 75, 220, 399, 420
HinP1I GCGC 4 cut(s) 75, 220, 399, 420
HincII GTYRAC 4 cut(s) 210, 336, 818, 892
HindII GTYRAC 4 cut(s) 210, 336, 818, 892
HinfI GANTC 5 cut(s) 466, 656, 752, 865, 953
HpaII CCGG 4 cut(s) 59, 584, 1100, 1340
HphI GGTGA 3 cut(s) 296, 949, 1127
Hpy166II GTNNAC 9 cut(s) 22, 210, 336, 797, 818, 892, 1033, 1325, 1331
Hpy188I TCNGA 8 cut(s) 34, 82, 330, 355, 603, 661, 715, 870
Hpy188III TCNNGA 7 cut(s) 104, 115, 253, 674, 749, 768, 1186
Hpy8I GTNNAC 9 cut(s) 22, 210, 336, 797, 818, 892, 1033, 1325, 1331
Hpy99I CGWCG 9 cut(s) 29, 82, 110, 155, 178, 217, 334, 410, 427
HpyAV CCTTC 4 cut(s) 100, 671, 720, 765
HpyCH4III ACNGT 4 cut(s) 340, 365, 506, 1219
HpyCH4IV ACGT 8 cut(s) 27, 212, 332, 724, 850, 861, 923, 1327
HpyCH4V TGCA 6 cut(s) 4, 547, 619, 884, 1072, 1282
HpyF3I CTNAG 4 cut(s) 201, 288, 821, 1353
HpySE526I ACGT 8 cut(s) 27, 212, 332, 724, 850, 861, 923, 1327
Hsp92I GRCGYC 2 cut(s) 27, 332
Hsp92II CATG 6 cut(s) 457, 536, 1000, 1042, 1237, 1367
HspAI GCGC 4 cut(s) 75, 220, 399, 420
Ksp22I TGATCA 1 cut(s) 157
LmnI GCTCC 1 cut(s) 72
LweI GCATC 2 cut(s) 514, 726
MaeI CTAG 7 cut(s) 515, 567, 729, 759, 768, 1181, 1266
MaeII ACGT 8 cut(s) 27, 212, 332, 724, 850, 861, 923, 1327
MaeIII GTNAC 2 cut(s) 449, 967
MboII GAAGA 3 cut(s) 236, 248, 1239
MfeI CAATTG 1 cut(s) 161
MflI RGATCY 4 cut(s) 325, 706, 1046, 1348
MlsI TGGCCA 3 cut(s) 995, 1118, 1209
MluCI AATT 9 cut(s) 161, 349, 368, 494, 690, 1003, 1111, 1173, 1251
MluNI TGGCCA 3 cut(s) 995, 1118, 1209
MlyI GAGTC 4 cut(s) 475, 650, 761, 947
MmeI TCCRAC 4 cut(s) 60, 303, 353, 1107
Mox20I TGGCCA 3 cut(s) 995, 1118, 1209
Mph1103I ATGCAT 1 cut(s) 6
MscI TGGCCA 3 cut(s) 995, 1118, 1209
MseI TTAA 8 cut(s) 300, 348, 375, 693, 845, 905, 926, 960
MslI CAYNNNNRTG 1 cut(s) 860
Msp20I TGGCCA 3 cut(s) 995, 1118, 1209
MspA1I CMGCKG 4 cut(s) 125, 478, 887, 1224
MspCI CTTAAG 1 cut(s) 374
MspI CCGG 4 cut(s) 59, 584, 1100, 1340
MspR9I CCNGG 2 cut(s) 1314, 1341
MunI CAATTG 1 cut(s) 161
Mva1269I GAATGC 2 cut(s) 4, 579
MvaI CCWGG 1 cut(s) 1314
MvnI CGCG 4 cut(s) 77, 222, 420, 422
NciI CCSGG 1 cut(s) 1341
NcoI CCATGG 1 cut(s) 1038
NdeI CATATG 1 cut(s) 1278
NlaIII CATG 6 cut(s) 457, 536, 1000, 1042, 1237, 1367
NlaIV GGNNCC 5 cut(s) 327, 708, 1190, 1323, 1350
NmeAIII GCCGAG 2 cut(s) 115, 487
NmuCI GTSAC 1 cut(s) 967
NsiI ATGCAT 1 cut(s) 6
OliI CACNNNNGTG 1 cut(s) 860
PcsI WCGNNNNNNNCGW 5 cut(s) 30, 44, 59, 212, 479
PctI GAATGC 2 cut(s) 4, 579
PfeI GAWTC 1 cut(s) 865
PflFI GACNNNGTC 1 cut(s) 26
PflMI CCANNNNNTGG 1 cut(s) 1144
PleI GAGTC 4 cut(s) 474, 650, 760, 947
PmaCI CACGTG 1 cut(s) 1328
PmlI CACGTG 1 cut(s) 1328
PpsI GAGTC 4 cut(s) 474, 650, 760, 947
Ppu21I YACGTR 1 cut(s) 1328
PshBI ATTAAT 1 cut(s) 693
Psp6I CCWGG 1 cut(s) 1312
PspCI CACGTG 1 cut(s) 1328
PspFI CCCAGC 1 cut(s) 121
PspGI CCWGG 1 cut(s) 1312
PspN4I GGNNCC 5 cut(s) 327, 708, 1190, 1323, 1350
PspPI GGNCC 2 cut(s) 87, 1322
PsuI RGATCY 4 cut(s) 325, 706, 1046, 1348
PsyI GACNNNGTC 1 cut(s) 26
PvuII CAGCTG 2 cut(s) 478, 887
RsaI GTAC 1 cut(s) 362
RsaNI GTAC 1 cut(s) 361
RseI CAYNNNNRTG 1 cut(s) 860
SaqAI TTAA 8 cut(s) 300, 348, 375, 693, 845, 905, 926, 960
Sau96I GGNCC 2 cut(s) 87, 1322
SchI GAGTC 4 cut(s) 475, 650, 761, 947
ScrFI CCNGG 2 cut(s) 1314, 1341
SfaNI GCATC 2 cut(s) 514, 726
SinI GGWCC 1 cut(s) 1322
SmiMI CAYNNNNRTG 1 cut(s) 860
SmlI CTYRAG 2 cut(s) 374, 800
SmoI CTYRAG 2 cut(s) 374, 800
Sse9I AATT 9 cut(s) 161, 349, 368, 494, 690, 1003, 1111, 1173, 1251
SsiI CCGC 8 cut(s) 125, 168, 317, 459, 639, 983, 1224, 1292
SspI AATATT 1 cut(s) 903
SspMI CTAG 7 cut(s) 515, 567, 729, 759, 768, 1181, 1266
StyD4I CCNGG 2 cut(s) 1312, 1339
StyI CCWWGG 1 cut(s) 1038
TaaI ACNGT 4 cut(s) 340, 365, 506, 1219
TaiI ACGT 8 cut(s) 30, 215, 335, 727, 853, 864, 926, 1330
TaqI TCGA 9 cut(s) 93, 105, 116, 215, 387, 482, 647, 675, 748
TaqII GACCGA 1 cut(s) 166
TasI AATT 9 cut(s) 161, 349, 368, 494, 690, 1003, 1111, 1173, 1251
TauI GCSGC 2 cut(s) 128, 461
TfiI GAWTC 1 cut(s) 865
Tru1I TTAA 8 cut(s) 300, 348, 375, 693, 845, 905, 926, 960
Tru9I TTAA 8 cut(s) 300, 348, 375, 693, 845, 905, 926, 960
TscAI CASTG 4 cut(s) 15, 549, 1035, 1156
TseFI GTSAC 1 cut(s) 967
Tsp45I GTSAC 1 cut(s) 967
TspDTI ATGAA 4 cut(s) 80, 249, 570, 1085
TspGWI ACGGA 2 cut(s) 7, 946
TspRI CASTG 4 cut(s) 15, 549, 1035, 1156
Tth111I GACNNNGTC 1 cut(s) 26
Van91I CCANNNNNTGG 1 cut(s) 1144
Vha464I CTTAAG 1 cut(s) 374
VpaK11BI GGWCC 1 cut(s) 1322
VspI ATTAAT 1 cut(s) 693
XapI RAATTY 2 cut(s) 368, 1003
XbaI TCTAGA 1 cut(s) 767
XcmI CCANNNNNNNNNTGG 1 cut(s) 1341
XspI CTAG 7 cut(s) 515, 567, 729, 759, 768, 1181, 1266
ZraI GACGTC 2 cut(s) 28, 333
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.