pycom02g11090

Phosphatidylinositol phosphatidylcholine transfer protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
7840959 .. 7844094
3136 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g11090.7

Sequence Viewer

Length: 1368 bp
ATGTCTGGACCTCTACCAGTATCTGATGCTGAAATCTCTGAGGAAGATAGAAAGACTAAAGTCGGGTTGTTGAAGAAGAAAGCAATGAATGCCTCTGTTAGGTTCAGAAATTCTATTTCAATAAGGTGTAGAACAAGCAGTAGTAAAGTCTTGTCTATCGACATTGAGGATGTGCATGACTTAGAGGAGATACAGGCTGTTGACTCGCTGCGGCAGGCTCTTATATTGGAGGAGCTTCTTCCTTTCAAGCATGATGATTATCATAAGATGCTCAGATTCTTGAAGGCCAGGAAATTTGATGTCGACAAAACCAAGAAAATGTGGTCTGACATGCTCGAGTGGAGGAAGGCATTCGGTACTGACACAATCATGGAGGACTTTGACTTCAAGGAACTCGATGAAGTCTTGCAATACTACCCCCAAGGACATCATGGCATAGACAAGGAAGGACGACCTGTGTACATCGAGAGACTAGGCCTAGTAGATGCGACCAAGCTGATGCAAGCCACAACTATGGACCGCTATCTCAAGTACCATGTGCAGGAGTTTGAAAGGACATTTGCGGTTAAGTTTCCAGCTTGTTCAATTGCAGCAAAGAAGAACATTGATCAAAGTACAACCATCCTCGATGTGCAAGGAGTGGTATGTGATAACCATAACCGCTACTTATACTCAGCAAATGATTTGAAAAACAAAAAACTAGAATCGCCAATGGAAAAACAAGGGAAAATTAAATATATTTTTTTTAAACATACTGTAATGCCTCAGGGATTTAAGAATTTCAACAAAGCTGCCAGGGAACTTATTACTCGCCTTCAGAAGATTGACGGTGACAATTACCCTGAGACCTTGAATTGCATGTTTATCATCAACGCTGGTTCTGGCTTTAGAATGTTGTGGAACAGCGTATCCCTAGCCAAAACTCTCGAAGCATCTTTCAGGCGCAAGGACAGTGCCTCGATGGTTGATAAATCTGTGGATTCAAGTTGGCCAATGGCGACGAGGAATGTTAAATTTGCCCTCTCAAACGCTAAATCATCTAAGAATTTAGGTGACCTTGTATATTGTGTTTCCTTTCCTTTTCTAGCTCTAAGATATTCCGTAGGGTCTGAGTTTCCTTTACTTGCAGCAGGAGATTGTTTCGCCAGGAACGATGCTTGCAAACTTCCTGAAGGGTTCGGCTCTCAGATTATGGCTGCTATTCTGACGTTTCTTATGGGCATTGTCGCCATGGTCAGATTAACACGTAGCATGCCGAAGAGGCTCACTGACTCCACCTTCTACTCCAGCACTGTCTGCGATGGTGACACAATGGTCAAAGGCCAGGGCTCTTCACACGCTGCCATCTCCGGCTCAGATCGATCATGA

Protein Analysis

456

Amino Acids

51.52

Weight (kDa)

8.94

Isoelectric Point (pI)

44.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1313
AccI GTMKAC 1 cut(s) 303
AciI CCGC 4 cut(s) 211, 520, 563, 661
AcoI YGGCCR 1 cut(s) 989
AcsI RAATTY 5 cut(s) 109, 293, 778, 1013, 1045
AcuI CTGAAG 2 cut(s) 800, 1191
AfaI GTAC 4 cut(s) 358, 461, 533, 616
AfiI CCNNNNNNNGG 2 cut(s) 99, 541
AflIII ACRYGT 1 cut(s) 1244
AjnI CCWGG 4 cut(s) 287, 794, 1145, 1323
AloI GAACNNNNNNTCC 2 cut(s) 893, 925
AluBI AGCT 5 cut(s) 235, 496, 578, 791, 1088
AluI AGCT 5 cut(s) 235, 496, 578, 791, 1088
Alw26I GTCTC 2 cut(s) 463, 839
AlwNI CAGNNNCTG 1 cut(s) 23
Ama87I CYCGRG 1 cut(s) 335
AoxI GGCC 4 cut(s) 285, 475, 989, 1321
ApeKI GCWGC 6 cut(s) 208, 590, 791, 1127, 1196, 1340
ApoI RAATTY 5 cut(s) 109, 293, 778, 1013, 1045
Asp700I GAANNNNTTC 1 cut(s) 350
AspLEI GCGC 1 cut(s) 945
AspS9I GGNCC 2 cut(s) 8, 517
AsuHPI GGTGA 3 cut(s) 842, 1064, 1316
AvaI CYCGRG 1 cut(s) 335
AvaII GGWCC 2 cut(s) 8, 517
AxyI CCTNAGG 1 cut(s) 765
BalI TGGCCA 1 cut(s) 991
BanII GRGCYC 1 cut(s) 1331
BbvI GCAGC 6 cut(s) 195, 602, 778, 1139, 1183, 1327
BccI CCATC 4 cut(s) 629, 955, 1295, 1352
BciT130I CCWGG 4 cut(s) 289, 796, 1147, 1325
BciVI GTATCC 1 cut(s) 919
BclI TGATCA 1 cut(s) 607
BcoDI GTCTC 2 cut(s) 463, 839
BfaI CTAG 5 cut(s) 473, 479, 701, 914, 1085
BfuI GTATCC 1 cut(s) 919
BglI GCCNNNNNGGC 1 cut(s) 1261
BisI GCNGC 7 cut(s) 209, 212, 591, 792, 1128, 1197, 1341
BlsI GCNGC 7 cut(s) 210, 213, 592, 793, 1129, 1198, 1342
Bme1390I CCNGG 4 cut(s) 289, 796, 1147, 1325
Bme18I GGWCC 2 cut(s) 8, 517
BmeT110I CYCGRG 1 cut(s) 335
BmgT120I GGNCC 2 cut(s) 8, 517
BmrFI CCNGG 4 cut(s) 289, 796, 1147, 1325
BmsI GCATC 6 cut(s) 16, 258, 475, 489, 941, 1144
BoxI GACNNNNGTC 1 cut(s) 59
BpmI CTGGAG 1 cut(s) 1270
BpuEI CTTGAG 1 cut(s) 512
Bsa29I ATCGAT 1 cut(s) 1360
BsaAI YACGTR 1 cut(s) 1247
BsaBI GATNNNNATC 1 cut(s) 258
BsaI GGTCTC 1 cut(s) 839
BsaJI CCNNGG 4 cut(s) 421, 795, 1230, 1324
Bsc4I CCNNNNNNNGG 2 cut(s) 99, 541
Bse1I ACTGG 1 cut(s) 17
Bse21I CCTNAGG 1 cut(s) 765
Bse3DI GCAATG 1 cut(s) 90
Bse8I GATNNNNATC 1 cut(s) 258
BseBI CCWGG 4 cut(s) 289, 796, 1147, 1325
BseCI ATCGAT 1 cut(s) 1360
BseDI CCNNGG 4 cut(s) 421, 795, 1230, 1324
BseGI GGATG 2 cut(s) 175, 621
BseJI GATNNNNATC 1 cut(s) 258
BseLI CCNNNNNNNGG 2 cut(s) 99, 541
BseMI GCAATG 1 cut(s) 90
BseMII CTCAG 8 cut(s) 30, 286, 687, 779, 834, 1101, 1199, 1368
BseNI ACTGG 1 cut(s) 17
BseRI GAGGAG 2 cut(s) 200, 245
BseXI GCAGC 6 cut(s) 195, 602, 778, 1139, 1183, 1327
BsgI GTGCAG 1 cut(s) 560
BshFI GGCC 4 cut(s) 287, 477, 991, 1323
BshVI ATCGAT 1 cut(s) 1360
BsiHKCI CYCGRG 1 cut(s) 335
BsiSI CCGG 1 cut(s) 1350
BslI CCNNNNNNNGG 2 cut(s) 99, 541
BsmAI GTCTC 2 cut(s) 463, 839
BsmI GAATGC 2 cut(s) 94, 350
BsnI GGCC 4 cut(s) 287, 477, 991, 1323
Bso31I GGTCTC 1 cut(s) 839
BsoBI CYCGRG 1 cut(s) 335
Bsp1286I GDGCHC 1 cut(s) 1331
Bsp1407I TGTACA 1 cut(s) 459
Bsp143I GATC 3 cut(s) 607, 1357, 1361
Bsp19I CCATGG 1 cut(s) 1230
BspACI CCGC 4 cut(s) 211, 520, 563, 661
BspANI GGCC 4 cut(s) 287, 477, 991, 1323
BspCNI CTCAG 8 cut(s) 31, 285, 686, 778, 835, 1102, 1198, 1367
BspDI ATCGAT 1 cut(s) 1360
BspHI TCATGA 1 cut(s) 1364
BspQI GCTCTTC 1 cut(s) 1336
BspTNI GGTCTC 1 cut(s) 839
BsrDI GCAATG 1 cut(s) 90
BsrGI TGTACA 1 cut(s) 459
BsrI ACTGG 1 cut(s) 17
BssECI CCNNGG 4 cut(s) 421, 795, 1230, 1324
BssMI GATC 3 cut(s) 607, 1357, 1361
BssT1I CCWWGG 2 cut(s) 421, 1230
Bst2UI CCWGG 4 cut(s) 289, 796, 1147, 1325
Bst4CI ACNGT 4 cut(s) 757, 830, 953, 1294
Bst6I CTCTTC 2 cut(s) 1253, 1336
BstAPI GCANNNNNTGC 2 cut(s) 89, 1296
BstAUI TGTACA 1 cut(s) 459
BstBAI YACGTR 1 cut(s) 1247
BstC8I GCNNGC 4 cut(s) 216, 504, 1159, 1253
BstDSI CCRYGG 1 cut(s) 1230
BstEII GGTNACC 1 cut(s) 1052
BstENI CCTNNNNNAGG 1 cut(s) 97
BstF5I GGATG 2 cut(s) 175, 621
BstHHI GCGC 1 cut(s) 945
BstKTI GATC 3 cut(s) 610, 1360, 1364
BstMAI GTCTC 2 cut(s) 463, 839
BstMBI GATC 3 cut(s) 607, 1357, 1361
BstMWI GCNNNNNNNGC 3 cut(s) 89, 1261, 1296
BstNI CCWGG 4 cut(s) 289, 796, 1147, 1325
BstNSI RCATGY 3 cut(s) 334, 862, 1255
BstPAI GACNNNNGTC 1 cut(s) 59
BstPI GGTNACC 1 cut(s) 1052
BstSCI CCNGG 4 cut(s) 287, 794, 1145, 1323
BstV1I GCAGC 6 cut(s) 195, 602, 778, 1139, 1183, 1327
BstXI CCANNNNNNTGG 1 cut(s) 514
Bsu15I ATCGAT 1 cut(s) 1360
Bsu36I CCTNAGG 1 cut(s) 765
BsuI GTATCC 1 cut(s) 919
BsuRI GGCC 4 cut(s) 287, 477, 991, 1323
BsuTUI ATCGAT 1 cut(s) 1360
BtgI CCRYGG 1 cut(s) 1230
BtgZI GCGATG 1 cut(s) 1314
BtsCI GGATG 2 cut(s) 175, 621
BtsIMutI CAGTG 3 cut(s) 958, 1266, 1290
Cac8I GCNNGC 4 cut(s) 216, 504, 1159, 1253
CaiI CAGNNNCTG 1 cut(s) 23
CciI TCATGA 1 cut(s) 1364
CfoI GCGC 1 cut(s) 945
Cfr13I GGNCC 2 cut(s) 8, 517
ClaI ATCGAT 1 cut(s) 1360
Csp6I GTAC 4 cut(s) 357, 460, 532, 615
CviQI GTAC 4 cut(s) 357, 460, 532, 615
DpnI GATC 3 cut(s) 609, 1359, 1363
DpnII GATC 3 cut(s) 607, 1357, 1361
DraI TTTAAA 1 cut(s) 748
DrdI GACNNNNNNGTC 1 cut(s) 1313
DseDI GACNNNNNNGTC 1 cut(s) 1313
EaeI YGGCCR 1 cut(s) 989
Eam1104I CTCTTC 2 cut(s) 1253, 1336
EarI CTCTTC 2 cut(s) 1253, 1336
Eco130I CCWWGG 2 cut(s) 421, 1230
Eco147I AGGCCT 1 cut(s) 477
Eco24I GRGCYC 1 cut(s) 1331
Eco31I GGTCTC 1 cut(s) 839
Eco47I GGWCC 2 cut(s) 8, 517
Eco57I CTGAAG 2 cut(s) 800, 1191
Eco81I CCTNAGG 1 cut(s) 765
Eco88I CYCGRG 1 cut(s) 335
Eco91I GGTNACC 1 cut(s) 1052
EcoNI CCTNNNNNAGG 1 cut(s) 97
EcoO65I GGTNACC 1 cut(s) 1052
EcoRII CCWGG 4 cut(s) 287, 794, 1145, 1323
EcoT14I CCWWGG 2 cut(s) 421, 1230
EcoT38I GRGCYC 1 cut(s) 1331
ErhI CCWWGG 2 cut(s) 421, 1230
FbaI TGATCA 1 cut(s) 607
FblI GTMKAC 1 cut(s) 303
Fnu4HI GCNGC 7 cut(s) 209, 212, 591, 792, 1128, 1197, 1341
FokI GGATG 2 cut(s) 182, 608
FriOI GRGCYC 1 cut(s) 1331
Fsp4HI GCNGC 7 cut(s) 209, 212, 591, 792, 1128, 1197, 1341
FspBI CTAG 5 cut(s) 473, 479, 701, 914, 1085
GlaI GCGC 1 cut(s) 944
GluI GCNGC 7 cut(s) 209, 212, 591, 792, 1128, 1197, 1341
GsuI CTGGAG 1 cut(s) 1270
HaeIII GGCC 4 cut(s) 287, 477, 991, 1323
HapII CCGG 1 cut(s) 1350
HhaI GCGC 1 cut(s) 945
Hin6I GCGC 1 cut(s) 943
HinP1I GCGC 1 cut(s) 943
HincII GTYRAC 2 cut(s) 202, 304
HindII GTYRAC 2 cut(s) 202, 304
HinfI GANTC 5 cut(s) 203, 276, 704, 980, 1271
HpaII CCGG 1 cut(s) 1350
HphI GGTGA 3 cut(s) 842, 1064, 1316
Hpy166II GTNNAC 3 cut(s) 202, 304, 460
Hpy188III TCNNGA 6 cut(s) 6, 280, 466, 926, 1169, 1365
Hpy8I GTNNAC 3 cut(s) 202, 304, 460
Hpy99I CGWCG 1 cut(s) 1003
HpyAV CCTTC 6 cut(s) 277, 340, 440, 824, 1166, 1288
HpyCH4III ACNGT 4 cut(s) 757, 830, 953, 1294
HpyCH4IV ACGT 2 cut(s) 1208, 1246
HpyCH4V TGCA 9 cut(s) 175, 409, 502, 541, 590, 634, 858, 1127, 1161
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 1261, 1296
HpySE526I ACGT 2 cut(s) 1208, 1246
HspAI GCGC 1 cut(s) 943
Ksp22I TGATCA 1 cut(s) 607
Kzo9I GATC 3 cut(s) 607, 1357, 1361
LguI GCTCTTC 1 cut(s) 1336
LmnI GCTCC 1 cut(s) 232
Lsp1109I GCAGC 6 cut(s) 195, 602, 778, 1139, 1183, 1327
LweI GCATC 6 cut(s) 16, 258, 475, 489, 941, 1144
MaeI CTAG 5 cut(s) 473, 479, 701, 914, 1085
MaeII ACGT 2 cut(s) 1208, 1246
MaeIII GTNAC 3 cut(s) 830, 1052, 1304
MalI GATC 3 cut(s) 609, 1359, 1363
MboI GATC 3 cut(s) 607, 1357, 1361
MboII GAAGA 8 cut(s) 56, 85, 88, 230, 610, 832, 1270, 1323
MfeI CAATTG 1 cut(s) 585
MhlI GDGCHC 1 cut(s) 1331
MlsI TGGCCA 1 cut(s) 991
MluCI AATT 9 cut(s) 109, 293, 585, 729, 778, 835, 853, 1013, 1045
MluNI TGGCCA 1 cut(s) 991
MlyI GAGTC 2 cut(s) 197, 1265
Mox20I TGGCCA 1 cut(s) 991
MroXI GAANNNNTTC 1 cut(s) 350
MscI TGGCCA 1 cut(s) 991
MseI TTAA 6 cut(s) 567, 732, 747, 774, 1011, 1241
MslI CAYNNNNRTG 2 cut(s) 368, 512
Msp20I TGGCCA 1 cut(s) 991
MspI CCGG 1 cut(s) 1350
MspR9I CCNGG 4 cut(s) 289, 796, 1147, 1325
MunI CAATTG 1 cut(s) 585
Mva1269I GAATGC 2 cut(s) 94, 350
MvaI CCWGG 4 cut(s) 289, 796, 1147, 1325
MwoI GCNNNNNNNGC 3 cut(s) 89, 1261, 1296
NcoI CCATGG 1 cut(s) 1230
NdeII GATC 3 cut(s) 607, 1357, 1361
NmuCI GTSAC 3 cut(s) 830, 1052, 1304
NspI RCATGY 3 cut(s) 334, 862, 1255
PaeI GCATGC 1 cut(s) 1255
PaeR7I CTCGAG 1 cut(s) 335
PagI TCATGA 1 cut(s) 1364
PceI AGGCCT 1 cut(s) 477
PciSI GCTCTTC 1 cut(s) 1336
PcsI WCGNNNNNNNCGW 1 cut(s) 1149
PctI GAATGC 2 cut(s) 94, 350
PdmI GAANNNNTTC 1 cut(s) 350
PfeI GAWTC 3 cut(s) 276, 704, 980
PkrI GCNGC 7 cut(s) 210, 213, 592, 793, 1129, 1198, 1342
PleI GAGTC 2 cut(s) 197, 1265
PpsI GAGTC 2 cut(s) 197, 1265
Ppu21I YACGTR 1 cut(s) 1247
PshAI GACNNNNGTC 1 cut(s) 59
Psp6I CCWGG 4 cut(s) 287, 794, 1145, 1323
PspEI GGTNACC 1 cut(s) 1052
PspGI CCWGG 4 cut(s) 287, 794, 1145, 1323
PspPI GGNCC 2 cut(s) 8, 517
PspXI VCTCGAGB 1 cut(s) 335
PstNI CAGNNNCTG 1 cut(s) 23
RsaI GTAC 4 cut(s) 358, 461, 533, 616
RsaNI GTAC 4 cut(s) 357, 460, 532, 615
RseI CAYNNNNRTG 2 cut(s) 368, 512
SalI GTCGAC 1 cut(s) 302
SapI GCTCTTC 1 cut(s) 1336
SaqAI TTAA 6 cut(s) 567, 732, 747, 774, 1011, 1241
SatI GCNGC 7 cut(s) 209, 212, 591, 792, 1128, 1197, 1341
Sau3AI GATC 3 cut(s) 607, 1357, 1361
Sau96I GGNCC 2 cut(s) 8, 517
SchI GAGTC 2 cut(s) 197, 1265
ScrFI CCNGG 4 cut(s) 289, 796, 1147, 1325
SduI GDGCHC 1 cut(s) 1331
SfaNI GCATC 6 cut(s) 16, 258, 475, 489, 941, 1144
Sfr274I CTCGAG 1 cut(s) 335
SinI GGWCC 2 cut(s) 8, 517
SlaI CTCGAG 1 cut(s) 335
SmiMI CAYNNNNRTG 2 cut(s) 368, 512
SmlI CTYRAG 2 cut(s) 335, 527
SmoI CTYRAG 2 cut(s) 335, 527
SphI GCATGC 1 cut(s) 1255
Sse9I AATT 9 cut(s) 109, 293, 585, 729, 778, 835, 853, 1013, 1045
SseBI AGGCCT 1 cut(s) 477
SsiI CCGC 4 cut(s) 211, 520, 563, 661
SspMI CTAG 5 cut(s) 473, 479, 701, 914, 1085
StuI AGGCCT 1 cut(s) 477
StyD4I CCNGG 4 cut(s) 287, 794, 1145, 1323
StyI CCWWGG 2 cut(s) 421, 1230
TaaI ACNGT 4 cut(s) 757, 830, 953, 1294
TaiI ACGT 2 cut(s) 1211, 1249
TaqI TCGA 9 cut(s) 159, 303, 336, 396, 465, 627, 927, 959, 1360
TasI AATT 9 cut(s) 109, 293, 585, 729, 778, 835, 853, 1013, 1045
TatI WGTACW 2 cut(s) 459, 614
TauI GCSGC 1 cut(s) 214
TfiI GAWTC 3 cut(s) 276, 704, 980
Tru1I TTAA 6 cut(s) 567, 732, 747, 774, 1011, 1241
Tru9I TTAA 6 cut(s) 567, 732, 747, 774, 1011, 1241
TscAI CASTG 3 cut(s) 958, 1273, 1297
TseFI GTSAC 3 cut(s) 830, 1052, 1304
TseI GCWGC 6 cut(s) 208, 590, 791, 1127, 1196, 1340
Tsp45I GTSAC 3 cut(s) 830, 1052, 1304
TspDTI ATGAA 2 cut(s) 101, 414
TspGWI ACGGA 1 cut(s) 1090
TspRI CASTG 3 cut(s) 958, 1273, 1297
VpaK11BI GGWCC 2 cut(s) 8, 517
XagI CCTNNNNNAGG 1 cut(s) 97
XapI RAATTY 5 cut(s) 109, 293, 778, 1013, 1045
XceI RCATGY 3 cut(s) 334, 862, 1255
XcmI CCANNNNNNNNNTGG 1 cut(s) 428
XhoI CTCGAG 1 cut(s) 335
XmiI GTMKAC 1 cut(s) 303
XmnI GAANNNNTTC 1 cut(s) 350
XspI CTAG 5 cut(s) 473, 479, 701, 914, 1085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.